mRNA_P-fluviatile_contig77.14175.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig77.14175.1
Unique NamemRNA_P-fluviatile_contig77.14175.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig77.14175.1 vs. uniprot
Match: D7FHX7_ECTSI (FHA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHX7_ECTSI)

HSP 1 Score: 288 bits (736), Expect = 4.330e-89
Identity = 169/326 (51.84%), Postives = 201/326 (61.66%), Query Frame = 2
Query:   32 MENAASNQEEPCAYAKLWGQLDGAPFHRYMTELPSTLGRGSAATE-TKKPPGFIDLGRSKALSREHAVINWVPALKGYQITCMSKNGMVVSGSYHAKGGVGKLESKAPIKLGPASMYFLLPETEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSVQSSQAXXXXXXXXXXTLPSXXXXXENSAQVVLPPVVXXXXXXXAVALAVEAAATVAPHPAAPLFSFADMVSGAFRSQELSGTAAAMG-LSSGDLQNWIMQAHPEWNQEGAKMRALAVGIQDTLNKNYVSLGGDRWTWRSNQNAKRPRISSHTSNNVPAMGVT 1003
            M  A S  +EPCA+AKLWGQLDGAPFH Y+T+LPSTLGRGS ATE  +K  GFIDLGRSKALSREHAVI WVP+ K YQI CMSKNGMVV+GSYHAKGGV KLES+APIKLGPASMYFLLPE EA                                     +V + +             P        S+Q  LPP         A +    AAA  AP P     SF DM+S AFRS+ELS  AAA G LSSGD+QNWIMQA+PEWN+EG +M+ALAVGI++ LN+++VS GGDRW    + + KR ++++ T     A  +T
Sbjct:    1 MATATSKDDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREA----------------------------QKPAPAPATAVAAPRVTPPPAASAPQAKPLESRPAPPSSQG-LPPENSAPAAVVAPSATTVAAAAPAPAPV----SFGDMISQAFRSRELSAVAAASGGLSSGDVQNWIMQAYPEWNKEGPRMKALAVGIEEALNESFVSRGGDRWA--EDSSVKRVKLNNGTPTPAVAAAIT 291          
BLAST of mRNA_P-fluviatile_contig77.14175.1 vs. uniprot
Match: A0A6H5JLB0_9PHAE (FHA domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB0_9PHAE)

HSP 1 Score: 274 bits (701), Expect = 1.200e-84
Identity = 170/296 (57.43%), Postives = 190/296 (64.19%), Query Frame = 2
Query:   32 MENAASNQEEPCAYAKLWGQLDGAPFHRYMTELPSTLGRGSAATE-TKKPPGFIDLGRSKALSREHAVINWVPALKGYQITCMSKNGMVVSGSYHAKGGVGKLESKAPIKLGPASMYFLLPETEAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSVQSSQAXXXXXXXXXXTLPSXXXXXENSAQVVLPPVVXXXXXXXAVALAVEAAATVAPHPAAPLFSFADMVSGAFRSQELSGTAAAMG-LSSGDLQNWIMQAHPEWNQEGAKMRALAVGIQDTLNKNYVSLGG 913
            M+ A S  +EPCA+AKLWGQLDGAPFH Y+T+LPSTLGRGS ATE  +K  GFIDLGRSKALSREHAVI WVP+ K YQI CMSKNGMVV+GSYHAKGGV KLES+APIKLGPASMYFLLPE EA    XXXXXX                           S Q               LP      ENS       VV       A   AV   A  AP PA    SF DMV  AFRS+ELS  AAA G LSSGD+QNWIMQA+PEWN+EG +M+ALAVGI++ LN+++VS GG
Sbjct:    1 MDTATSKDDEPCAFAKLWGQLDGAPFHTYVTQLPSTLGRGSQATEGARKSAGFIDLGRSKALSREHAVITWVPSQKSYQIKCMSKNGMVVAGSYHAKGGVEKLESRAPIKLGPASMYFLLPEREAQKPAXXXXXXAAAPRVTPPPAASTPQGKPLDSRPAPPSSQG--------------LPP-----ENSVTTA---VVAPSATTVAAXXAVANPAVPAPAPAT--VSFGDMVCQAFRSRELSAVAAASGGLSSGDVQNWIMQAYPEWNKEGPRMKALAVGIEEALNESFVSRGG 272          
BLAST of mRNA_P-fluviatile_contig77.14175.1 vs. uniprot
Match: K3WXW7_GLOUD (FHA domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WXW7_GLOUD)

HSP 1 Score: 92.0 bits (227), Expect = 2.890e-17
Identity = 51/119 (42.86%), Postives = 66/119 (55.46%), Query Frame = 2
Query:   32 MENAASNQEEPCAYAKLWGQL-DGAPFHRYMTELPSTLGRGSAATETKKPPGFIDLGRSKALSREHAVINWVPALKGYQITCMSKNGMVVSGSYHAKGGVGKLESKAPIKLGPASMYFL 385
            +E        P AYAK+ G++ D  PF   +T LP+ LGRG  +T    P   I LG  KALSR+HA I W     G+++  + KNGM  SG Y  K     L SK P+K+GPA +YFL
Sbjct:   11 LEKKFVESRPPLAYAKISGRVHDDVPFEMLITHLPTELGRGPLSTS---PGPKISLGEQKALSRQHARIQWNQEKSGFELEVLGKNGMFASGKYIGKDKKVDLVSKMPLKIGPARIYFL 126          
BLAST of mRNA_P-fluviatile_contig77.14175.1 vs. uniprot
Match: A0A5D6XJ22_9STRA (FHA domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJ22_9STRA)

HSP 1 Score: 86.3 bits (212), Expect = 2.380e-15
Identity = 48/119 (40.34%), Postives = 67/119 (56.30%), Query Frame = 2
Query:   32 MENAASNQEEPCAYAKLWGQL-DGAPFHRYMTELPSTLGRGSAATETKKPPGFIDLGRSKALSREHAVINWVPALKGYQITCMSKNGMVVSGSYHAKGGVGKLESKAPIKLGPASMYFL 385
            +E        P A+AKL G++ D  PF   +T LP  LGRG+ +T    P   + LG  KALSR+HA I W     G+++  + KNG+  +G Y AK     L S+ P+K+GPA +YFL
Sbjct:   11 LEKRYVESRPPLAFAKLSGRVHDEKPFEMLITHLPVELGRGALSTS---PGPKLMLGEQKALSRQHARIEWNKEKSGFELEVLGKNGLYAAGKYVAKDKKVDLVSRMPLKIGPARVYFL 126          
BLAST of mRNA_P-fluviatile_contig77.14175.1 vs. uniprot
Match: A0A137NZQ4_CONC2 (Uncharacterized protein n=1 Tax=Conidiobolus coronatus (strain ATCC 28846 / CBS 209.66 / NRRL 28638) TaxID=796925 RepID=A0A137NZQ4_CONC2)

HSP 1 Score: 62.8 bits (151), Expect = 1.080e-6
Identity = 36/109 (33.03%), Postives = 62/109 (56.88%), Query Frame = 2
Query:   68 AYAKLWGQLDGAPFHRYMTELPSTLGRGSAATETKKPPGFIDLGRSKALSREHAVINWVPALKGYQITCMSKNGMVVSGSYHAKGGVGKLESKAPIKLGPASMYFLLPE 394
            A+ + + +L+G     YM EL  T+GR     +       +DLG +KA+SR+HA I +    + ++++   KNG+V+   ++ KG   KLE  + I++G  + YFLLP+
Sbjct:   19 AHVQAYAKLEGDDVCYYMKELHITIGRKINPQDDIN----VDLGPTKAISRQHAKIYYNLVDQKFELSVQGKNGVVIDDVFYKKGSNIKLEHGSKIQIGNQTFYFLLPK 123          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig77.14175.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FHX7_ECTSI4.330e-8951.84FHA domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5JLB0_9PHAE1.200e-8457.43FHA domain-containing protein n=1 Tax=Ectocarpus s... [more]
K3WXW7_GLOUD2.890e-1742.86FHA domain-containing protein n=1 Tax=Globisporang... [more]
A0A5D6XJ22_9STRA2.380e-1540.34FHA domain-containing protein n=1 Tax=Pythium bras... [more]
A0A137NZQ4_CONC21.080e-633.03Uncharacterized protein n=1 Tax=Conidiobolus coron... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig77contigP-fluviatile_contig77:445992..451410 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score287.3
Seed ortholog evalue1.1e-74
Seed eggNOG ortholog2880.D7FHX7
Preferred nameFOXK1
KEGG koko:K09404
GOsGO:0000981,GO:0002252,GO:0002376,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006357,GO:0006950,GO:0006952,GO:0007154,GO:0007267,GO:0007275,GO:0007494,GO:0007495,GO:0008150,GO:0009605,GO:0009607,GO:0009615,GO:0009653,GO:0009889,GO:0009893,GO:0009987,GO:0010468,GO:0010556,GO:0010604,GO:0010628,GO:0019219,GO:0019222,GO:0023052,GO:0030154,GO:0031323,GO:0031326,GO:0032501,GO:0032502,GO:0035295,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464,GO:0048518,GO:0048565,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051607,GO:0051704,GO:0051707,GO:0055123,GO:0060255,GO:0065007,GO:0080090,GO:0098542,GO:0098586,GO:0140110,GO:1903506,GO:2000112,GO:2001141
EggNOG free text desc.sequence-specific DNA binding
EggNOG OGsCOG5025@1,KOG2294@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionForkhead-associated (FHA) domain
Ec32 orthologEc-12_006270.1
Exons6
Model size1761
Cds size1215
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig77.14175.1prot_P-fluviatile_contig77.14175.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig77 446507..451379 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817202.6190448-UTR-P-fluviatile_contig77:445991..4465061622817202.6190448-UTR-P-fluviatile_contig77:445991..446506Porterinema fluviatile SAG_2381UTRP-fluviatile_contig77 445992..446506 -
1693571505.2794464-UTR-P-fluviatile_contig77:445991..4465061693571505.2794464-UTR-P-fluviatile_contig77:445991..446506Porterinema fluviatile SAG_2381UTRP-fluviatile_contig77 445992..446506 -
1622817202.6961093-UTR-P-fluviatile_contig77:451379..4514101622817202.6961093-UTR-P-fluviatile_contig77:451379..451410Porterinema fluviatile SAG_2381UTRP-fluviatile_contig77 451380..451410 -
1693571505.3517663-UTR-P-fluviatile_contig77:451379..4514101693571505.3517663-UTR-P-fluviatile_contig77:451379..451410Porterinema fluviatile SAG_2381UTRP-fluviatile_contig77 451380..451410 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817202.6300924-CDS-P-fluviatile_contig77:446506..4468381622817202.6300924-CDS-P-fluviatile_contig77:446506..446838Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 446507..446838 -
1693571505.2896957-CDS-P-fluviatile_contig77:446506..4468381693571505.2896957-CDS-P-fluviatile_contig77:446506..446838Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 446507..446838 -
1622817202.6413748-CDS-P-fluviatile_contig77:447239..4473341622817202.6413748-CDS-P-fluviatile_contig77:447239..447334Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 447240..447334 -
1693571505.2979722-CDS-P-fluviatile_contig77:447239..4473341693571505.2979722-CDS-P-fluviatile_contig77:447239..447334Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 447240..447334 -
1622817202.6515675-CDS-P-fluviatile_contig77:448204..4485151622817202.6515675-CDS-P-fluviatile_contig77:448204..448515Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 448205..448515 -
1693571505.307603-CDS-P-fluviatile_contig77:448204..4485151693571505.307603-CDS-P-fluviatile_contig77:448204..448515Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 448205..448515 -
1622817202.663981-CDS-P-fluviatile_contig77:449049..4492281622817202.663981-CDS-P-fluviatile_contig77:449049..449228Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 449050..449228 -
1693571505.3169656-CDS-P-fluviatile_contig77:449049..4492281693571505.3169656-CDS-P-fluviatile_contig77:449049..449228Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 449050..449228 -
1622817202.6743894-CDS-P-fluviatile_contig77:449725..4498271622817202.6743894-CDS-P-fluviatile_contig77:449725..449827Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 449726..449827 -
1693571505.3325667-CDS-P-fluviatile_contig77:449725..4498271693571505.3325667-CDS-P-fluviatile_contig77:449725..449827Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 449726..449827 -
1622817202.684946-CDS-P-fluviatile_contig77:451183..4513791622817202.684946-CDS-P-fluviatile_contig77:451183..451379Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 451184..451379 -
1693571505.344073-CDS-P-fluviatile_contig77:451183..4513791693571505.344073-CDS-P-fluviatile_contig77:451183..451379Porterinema fluviatile SAG_2381CDSP-fluviatile_contig77 451184..451379 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig77.14175.1

>prot_P-fluviatile_contig77.14175.1 ID=prot_P-fluviatile_contig77.14175.1|Name=mRNA_P-fluviatile_contig77.14175.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=405bp
MENAASNQEEPCAYAKLWGQLDGAPFHRYMTELPSTLGRGSAATETKKPP
GFIDLGRSKALSREHAVINWVPALKGYQITCMSKNGMVVSGSYHAKGGVG
KLESKAPIKLGPASMYFLLPETEAPAAAPASASAPAPAPASAPAPAPAPA
PTPAPAPAPARSVQSSQAPPPPPTAQALTLPSPPPPPENSAQVVLPPVVS
PPPPASAVALAVEAAATVAPHPAAPLFSFADMVSGAFRSQELSGTAAAMG
LSSGDLQNWIMQAHPEWNQEGAKMRALAVGIQDTLNKNYVSLGGDRWTWR
SNQNAKRPRISSHTSNNVPAMGVTVAAAAAAAAAAAAAAAAAPVSAPAAP
TSAAAENGGQVNGGSYVMTAAGPAGPAAAAPAGGGPSSDRIGAGGESQDV
FVID*
back to top

mRNA from alignment at P-fluviatile_contig77:445992..451410-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig77.14175.1 ID=mRNA_P-fluviatile_contig77.14175.1|Name=mRNA_P-fluviatile_contig77.14175.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5419bp|location=Sequence derived from alignment at P-fluviatile_contig77:445992..451410- (Porterinema fluviatile SAG_2381)
CAAGTAGAGGACTGAGGCAGGAAGGGGAGAGATGGAAAATGCCGCTTCCA ACCAAGAAGAGCCCTGTGCCTACGCCAAACTTTGGGGGCAGCTTGATGGT GCTCCGTTCCACCGCTACATGACCGAGCTGCCGTCCACCCTGGGCAGAGG ATCGGCGGCGACCGAGACCAAGAAGCCGCCCGGCTTCATCGATCTCGGAC GCTCGAAGGCTCTGTCGAGGGAGCACGGTGAGGGAGAGAGGGTTGAACTT GATGGCTTGGCTGGTGGATATGAGAAGGTCGCTCTGTTTCAAAAATTGCC CGTGGGTTGTGGTCGTGTTCCCTTTCCCGCAGGCAAGGTTCAAAACAACG CCCGCGTTGCATGTGTGCACGCACATCCCCCGTGGATGCGGCGTCTGCCT GTCGACGTGTCATGTAAGCGGCACAGCAGTGCACCGGTGCTTACTAGCGG TCGCTTGTGCGGGTTTACCTAAGCCACCTCGTTCTGATCTCTTCGTGAGA TCATGAGTGATACTGCTGTTGTCTGCCTGGACGTGTCATTGTCGTGGTCG TGATTTGACTTTCGTCGCGCGGCTGGTGACACCACATCAACATCTCCAGT CTGACGTCTGACGTGCTTCAGACGGTTAAATTTCACGGAGATCAACACCC GCCGTGTCGAGGAAGATGATGATATCGTTGGGGGTGGAAGTGAGGAGGGA TTCGCGCAGCGGGCTTGTGCTGCCCTTCTCGATGGCACGCACACATGCAC ACAGACGGCGCGGAGGAAGAATGAAGCGAGATAAGAGGTGAAAGGCGAGG CGATTTGCTGCCGATCCAAGGGCGACCGTTTCCCCCACGAAGATACGGGA GGGATGAGAGGAGGGAAGAGTGGACGGCCCACGTGTTGCAGGGAATGATG CAGAGGAGGGCAGGATAGCAGCAAAAGAAGCTGCGGAGGTCCAGGGGATG AACGGCGCTACATGCGTCGTTTCCAGAGCGAGCAGTGCACTTGAACCTGG GGAATGTTGCAAGCACCCCTCGATGACCGAAACACGTGAAGAAAATGAAA TGGGGGAAAGAAAGCGGAGAGTCGGTACAGGCCACGTAGCATTGACACTG ACAAGGAACGAGCGGCTTTTCTGTAGAACCCAACTTTTGTCGAGGCATTC GCCGCGGATTTTACATTGTAGATTTTTCCGCAACCACCGAGGGTGAGGTC GTTAGCATCTACGAGACGTTTAAGGCGCTCGTCTCTACCTGTAACTGATG ACTGGAGGGCGGTGGGAGGGAGATGGGGTTATTAGGTACTTCAACCTTAC TCAAATCGAGATGTTTCGGGTTTCGCAGGTATACCGCCTAGTATGCTCTC TGCTTGAGATATTCGGCAACCCGCACGCACGCTACTTTCCCACACGAAAT CCTCCCTTTGTTCCGTCCTCTCCGTTTTCCACACTCCCCACGGCCCCTCC TCCCTCTCGTCGTATCGGCTGGCCTCACCCGGATTACAACAACCGGGGCG CTTTGTGGAACTTGCGGCTCGAACTACCTTCGCGGGTGTGCGAAAACGAA CGATCGAACGAACGAATGAACGAACCGCAACAGCCGTCATCAACTGGGTG CCCGCGCTCAAGGGGTACCAAATCACGTGCATGAGCAAGAACGGGATGGT GGTATCTGGGAGTTACCATGCCAAGGGCGGCGTCGGTGAGAAGGGTAGGG CATGGGTAGGACGGGTAGTGACGGGATAAGGTTGTTAGGGCAGAGAACAA CACGGGGGCGTTGCATTTATTTCCAAGCGTTTTGGGACGGCTATCGTGAG TAAACCGAGCGTATTACTCGCCTCGCTCTCTCTCTCTCTCTCTCTCTCTC TTGCGGCATAATTGCGAACATGTGTGCAAACCAAGCGCGTTGTCATCGGT TCGTGCAGCTCGCCCCGAGGTTGAAGAAACTACGCAAGATCTGGATCTTT GTACACATATGCAGAATTTCGAAGGGGCAAACGCCTTGCGGGCCAGCACC TGACTCAAAGGCACTGCTGCGGGATGCGACCTACTCCCAAGCCCAGTGCT CAATAATGGTGCTTGAATGTGTTCCCCCTCCTCGAATGGCTGAAACCTCG TGTCCTCTCCTCCCGTGGTCGGGGTCAGAATTGAGCGATCGTTGACCCTC TGCTCTCCGATGTGGTCGCCCCCCCCCGGCAGGCAAGCTCGAGTCGAAAG CCCCCATCAAGCTCGGCCCGGCGTCGATGTACTTCCTGCTGCCAGAAACA GAGGCACCGGCTGCGGCCCCCGCCTCGGCCTCGGCCCCAGCTCCGGCCCC AGCTTCGGCCCCCGCCCCGGCTCCTGCTCCCGCACCCACGCCTGCGCCTG CTCCCGCCCCGGTACAAACGAGCACCTACCGTTGCCAGTTCCTCTCCGAA ATCGAGCGTCGTTTGCCGCTCTTATTACAATGGTAGTGTTCGGTTGCCGC CGCCTCTTTCTTTATTTTGGCGTCGCTTTAGAACCGATGCATTGTGGGTT CGAACCCGGGTGACGGAACGAACGCCAGAAGGGGGGGCGCACGCCGCACG CATTGGAAACAAGCCGGGTCATGTGAAGGTCGGATAGGATGATTGAGCGT CAGCAACGGTGCATGTTCGCTCCCCTCCCTCACGCGCAGGCACGGCCCTA ATCGTTTTCGCTTCGTTTTCAGTGATTTCAATCGGCCTCTTTGCAAGTTT TGCGGACTCTGGTTTGATGTGCGCCTTGAATTTTCTTCGACGCAAGCGTG GAAGGTTTGTACTCTTCCATGTTTTCTTTGCTCTGGCCGTGGATGTGGAT TTTTGGGTGTGTTATTGTTGTTTAATATCCGATTAGATGTAATTTCCCCC GCGAATGCTGCTTTCGTTTCTTTCTCCATTGTTTGGGTTTCGCAGGCACG GTCGGTCCAGAGCTCGCAAGCCCCACCACCACCACCGACGGCACAAGCTT TGACGCTGCCGTCTCCGCCGCCACCACCAGAAAACAGTGCGCAGGTGGTG TTGCCGCCGGTCGTTTCGCCGCCGCCGCCGGCGTCGGCCGTCGCCCTGGC AGTGGAGGCGGCGGCGACGGTGGCCCCCCATCCCGCTGCCCCATTGTTTT CCTTCGCTGATATGGTCTCGGGCGCGTTCAGGAGCCAGGAACTGTCGGGG ACCGCCGCGGCGATGGGCCTGTCGAGCGGCGACTTGCAAAACTGGATCAT GCAGGCGTGAGTGGAGTATTCAGAGCTCAGGGAGGGAGGAGCGCTAGGGG AGAAGGCCGGAAGGGCAGGCGGCGGGATTTGCGAGGCTTTCCGCTATGGG GGTGGAGGCGCGATAGACGACACTGTTGTCAGATCGTTTCGGATCGTGAG ATGCTGTGTCAGGCTTGGCACGGGCGGGTTCGTTTTCGCCTGTGCCGACG CTGTGCCGTTTCAGCACAATTCCGCATGCCGCTGTGAAAGTTGGCCTTCA TTTTACGCTTTCCATGACTCATAGAGTCAACAAAAGGTCTGGCGGTGTCC CCTCGGCTGGTTCTACGAAAGCGCGCCCGGCTTAACTAGGGGGGGCGTGG GGCGAGGATGCATGCACGTGCAACCACGGAACTGAATTCGGTTGCCGAAG CACGAGTCAGTCGAAGCAGGAATCAACAGAAGCACGAATCAATCGAAGCA TGGATCAATCGTTGTTGATAGATTTAGTGGGATGGAAACAAGTGTGCGTG TTGAAAGCTGCCCCTCCCCCCGCCCTGGAGCAAGCACGCGATTCATCCGT TGGCATCGCGGGTGTTGGCCTGGCTAAATGCGTTTTGTGTGGTGCGTTGT GCCAGGCAAGCAAGGGACTTCGATGGGCGCTCGCATGCGCGGAGCTGAAG ATATGCCTCCGTGCAAGTGTCAAAGCACCCTCCCTCATTTCCCCCCCTTC TTCCCGAAGGACAGGTGTGCCTCGTCGCGATGGTCGAGCTCTCAGAAGGT GTCATCAAACATGGCTTCTGCAGATTCCCCATCAGCGATGACCCTTGCAT GTACCCCACGCCATGTCAACACTAGACCCTTCTCGTTCACGTCTCTTACC CCGTTCTCCACGCCGTGTCCATGCAGCCACCCGGAGTGGAATCAAGAAGG AGCGAAGATGAGGGCGCTCGCGGTAGGGATCCAGGACACGTTGAACAAGA ACTACGTGTCGCTCGGAGGAGGTGAGATGCGAGGGAGAAGAGACAGACAG CAGATGCTTCACCACGATATCTGCGCCGCCAGGAACGAAAATGAACGCAG GCGACAGTTTGCGTCATCAACAAACAGGCCGGCGACACGTCGCCCTCTGC GACGAATAACAATTGTGCAGGCAGTTTCAGCCACCGTAGGAATAAGTCTC TCCCGCTCCTGCCCTTGCCTGTGCTCCGCCCTCTCGAGGACGCGTGGTCA ATGGCCTAACCGCTGAGGCATGCAAAATATAAGAGTACGCCCCCCGCTCC TGCCCTTGCTCCCATCCCCCTGCGGCACTGCCGTCTGCGCTGCGCTGCAT CGCGATGTGCTCTTGCTTCTCCCTGCCTTTCTCGCTCCCTCTTGACCGTT TTGCTTGCCCCTTTGTCTGCAGACCGATGGACATGGCGATCCAATCAAAA CGCCAAGCGACCAAGAATTTCGAGTCACACCAGTAACAACGTTCCGGCGA TGGGTGTCACCGTGGCAGCAGCAGCGGCGGCGGCAGCGGCGGCGGCGGCG GCAGCGGCCGCGGCACCGGTATCGGCACCAGCTGCCCCGACTAGCGCCGC CGCAGAAAACGGTGGTCAGGTGAATGGTGGAAGCTACGTGATGACTGCTG CTGGTCCTGCAGGTCCTGCTGCCGCTGCTCCAGCTGGTGGTGGTCCCTCT TCCGACCGCATTGGGGCGGGCGGGGAGAGTCAGGATGTATTCGTGATTGA CTGACTGTCGTGGGATATTGGGCACGGGTTTGCCGAACTTTTGATCCGAT GTGGTGTGATGTACGTGTTTTTTTCGCTTGTTTTTTATTACGAGGAGAGG ATTGCTGCCCGAGGTGTGTAGGTTTTGTGTGCCGCACTGCTTCGTCAATT TTTACTGAGGTTTGTGGCTTGTGTTTAAGCATTTTCAAAGTAGCCCATAG CGGTAGTCTACTGTGCTGCTTCCGTATCGAGGATTTCAGTCGGTCAGGTA CAAAAGATGAAGCCGTCCGCGCGGGTTTGCACGTTCGTCTCACTTTTTCC CTGCTGGACCTTGGCGGAGTGCGCAAGTCCTGTCCGGTACGGAATATCAC CTCCGAATTTTTGAAGCCCGGTGTTTTCAAATCTCGCAGAATTCTGGAGC GCTGATCGGCACGTTGACGGAAACATGTCGACAACGACGTGTTTCCAATC TGCCCACATTTGTGGCGCGAGCACCTTGCTGTCGTGGCGAAACCGATGTT TGATAGTGTGTCGTCGGAG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig77:445992..451410-

>mRNA_P-fluviatile_contig77.14175.1 ID=mRNA_P-fluviatile_contig77.14175.1|Name=mRNA_P-fluviatile_contig77.14175.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2430bp|location=Sequence derived from alignment at P-fluviatile_contig77:445992..451410- (Porterinema fluviatile SAG_2381)
ATGGAAAATGCCGCTTCCAACCAAGAAGAGCCCTGTGCCTACGCCAAACT
TTGGGGGCAGCTTGATGGTGCTCCGTTCCACCGCTACATGACCGAGCTGC
CGTCCACCCTGGGCAGAGGATCGGCGGCGACCGAGACCAAGAAGCCGCCC
GGCTTCATCGATCTCGGACGCTCGAAGGCTCTGTCGAGGGAGCACGATGG
AAAATGCCGCTTCCAACCAAGAAGAGCCCTGTGCCTACGCCAAACTTTGG
GGGCAGCTTGATGGTGCTCCGTTCCACCGCTACATGACCGAGCTGCCGTC
CACCCTGGGCAGAGGATCGGCGGCGACCGAGACCAAGAAGCCGCCCGGCT
TCATCGATCTCGGACGCTCGAAGGCTCTGTCGAGGGAGCACGCCGTCATC
AACTGGGTGCCCGCGCTCAAGGGGTACCAAATCACGTGCATGAGCAAGAA
CGGGATGGTGGTATCTGGGAGTTACCATGCCAAGGGCGGCGTCGCCGTCA
TCAACTGGGTGCCCGCGCTCAAGGGGTACCAAATCACGTGCATGAGCAAG
AACGGGATGGTGGTATCTGGGAGTTACCATGCCAAGGGCGGCGTCGGCAA
GCTCGAGTCGAAAGCCCCCATCAAGCTCGGCCCGGCGTCGATGTACTTCC
TGCTGCCAGAAACAGAGGCACCGGCTGCGGCCCCCGCCTCGGCCTCGGCC
CCAGCTCCGGCCCCAGCTTCGGCCCCCGCCCCGGCTCCTGCTCCCGCACC
CACGCCTGCGCCTGCTCCCGCCCCGGCAAGCTCGAGTCGAAAGCCCCCAT
CAAGCTCGGCCCGGCGTCGATGTACTTCCTGCTGCCAGAAACAGAGGCAC
CGGCTGCGGCCCCCGCCTCGGCCTCGGCCCCAGCTCCGGCCCCAGCTTCG
GCCCCCGCCCCGGCTCCTGCTCCCGCACCCACGCCTGCGCCTGCTCCCGC
CCCGGCACGGTCGGTCCAGAGCTCGCAAGCCCCACCACCACCACCGACGG
CACAAGCTTTGACGCTGCCGTCTCCGCCGCCACCACCAGAAAACAGTGCG
CAGGTGGTGTTGCCGCCGGTCGTTTCGCCGCCGCCGCCGGCGTCGGCCGT
CGCCCTGGCAGTGGAGGCGGCGGCGACGGTGGCCCCCCATCCCGCTGCCC
CATTGTTTTCCTTCGCTGATATGGTCTCGGGCGCGTTCAGGAGCCAGGAA
CTGTCGGGGACCGCCGCGGCGATGGGCCTGTCGAGCGGCGACTTGCAAAA
CTGGATCATGCAGGCGCACGGTCGGTCCAGAGCTCGCAAGCCCCACCACC
ACCACCGACGGCACAAGCTTTGACGCTGCCGTCTCCGCCGCCACCACCAG
AAAACAGTGCGCAGGTGGTGTTGCCGCCGGTCGTTTCGCCGCCGCCGCCG
GCGTCGGCCGTCGCCCTGGCAGTGGAGGCGGCGGCGACGGTGGCCCCCCA
TCCCGCTGCCCCATTGTTTTCCTTCGCTGATATGGTCTCGGGCGCGTTCA
GGAGCCAGGAACTGTCGGGGACCGCCGCGGCGATGGGCCTGTCGAGCGGC
GACTTGCAAAACTGGATCATGCAGGCCCACCCGGAGTGGAATCAAGAAGG
AGCGAAGATGAGGGCGCTCGCGGTAGGGATCCAGGACACGTTGAACAAGA
ACTACGTGTCGCTCGGAGGAGCCACCCGGAGTGGAATCAAGAAGGAGCGA
AGATGAGGGCGCTCGCGGTAGGGATCCAGGACACGTTGAACAAGAACTAC
GTGTCGCTCGGAGGAGACCGATGGACATGGCGATCCAATCAAAACGCCAA
GCGACCAAGAATTTCGAGTCACACCAGTAACAACGTTCCGGCGATGGGTG
TCACCGTGGCAGCAGCAGCGGCGGCGGCAGCGGCGGCGGCGGCGGCAGCG
GCCGCGGCACCGGTATCGGCACCAGCTGCCCCGACTAGCGCCGCCGCAGA
AAACGGTGGTCAGGTGAATGGTGGAAGCTACGTGATGACTGCTGCTGGTC
CTGCAGGTCCTGCTGCCGCTGCTCCAGCTGGTGGTGGTCCCTCTTCCGAC
CGCATTGGGGCGGGCGGGGAGAGTCAGGATGTATTCGTGATTGACTGAAC
CGATGGACATGGCGATCCAATCAAAACGCCAAGCGACCAAGAATTTCGAG
TCACACCAGTAACAACGTTCCGGCGATGGGTGTCACCGTGGCAGCAGCAG
CGGCGGCGGCAGCGGCGGCGGCGGCGGCAGCGGCCGCGGCACCGGTATCG
GCACCAGCTGCCCCGACTAGCGCCGCCGCAGAAAACGGTGGTCAGGTGAA
TGGTGGAAGCTACGTGATGACTGCTGCTGGTCCTGCAGGTCCTGCTGCCG
CTGCTCCAGCTGGTGGTGGTCCCTCTTCCGACCGCATTGGGGCGGGCGGG
GAGAGTCAGGATGTATTCGTGATTGACTGA
back to top