mRNA_P-fluviatile_contig77.14170.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig77.14170.1 vs. uniprot
Match: D7FHY4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY4_ECTSI) HSP 1 Score: 304 bits (778), Expect = 4.330e-87 Identity = 152/202 (75.25%), Postives = 165/202 (81.68%), Query Frame = 2
Query: 2012 RGSPEELAQLVRDMEAELLRKLQAEEDAKSLLDIWVEKAREYVLTQTVPPTDAECDFSWSRLRCEPKCSCGARLRFGDYTPGRACRLLRPWERSPDLCGEDGAGG---------------VWDPSDEPAYRRVVAAVAGALGGLRRAYEARVAPPSDPECRFSLETRRCEPQPLCRLRVRWGDISLSSGCRLA--AVSEDKK 2566
RGSPE++AQ VRDMEAEL+RKL AEEDAKSLLDIWVE+ REYVLTQTVPPTDAECDF+WSRLRCEPKC+CGARLRFGDYTPGRACRLL PWER+P+LCG G WDPSDEPA RRVVAA AGALGGLR+AYE RVAPPSD EC FS ETRRCEPQPLCRLR RWGD++ SS CRLA A S++KK
Sbjct: 460 RGSPEDMAQRVRDMEAELVRKLLAEEDAKSLLDIWVERTREYVLTQTVPPTDAECDFNWSRLRCEPKCTCGARLRFGDYTPGRACRLLHPWERNPELCGSGVDGDDXXXXXXXXXXXXXXXWDPSDEPAVRRVVAAAAGALGGLRQAYEERVAPPSDSECSFSFETRRCEPQPLCRLRFRWGDLTPSSACRLAGGASSDEKK 661
BLAST of mRNA_P-fluviatile_contig77.14170.1 vs. uniprot
Match: A0A6H5JIE4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIE4_9PHAE) HSP 1 Score: 307 bits (787), Expect = 8.330e-87 Identity = 155/203 (76.35%), Postives = 168/203 (82.76%), Query Frame = 2
Query: 2012 RGSPEELAQLVRDMEAELLRKLQAEEDAKSLLDIWVEKAREYVLTQTVPPTDAECDFSWSRLRCEPKCSCGARLRFGDYTPGRACRLLRPWERSPDLCG-----EDGAGG-----------VWDPSDEPAYRRVVAAVAGALGGLRRAYEARVAPPSDPECRFSLETRRCEPQPLCRLRVRWGDISLSSGCRLA--AVSEDKK 2566
RGSPEE+AQ VRDMEAEL+RKL AEEDAKSLLDIWVE+ REYVLTQTVPPTDAECDF+WSRLRCEPKC+CGARLRFGDYTPGRACRLL PWER+P+LCG +DG WDPSDEPA RRVVAAVAG LGGLR+AYEARVAPPSD EC FS ETRRCEPQPLCRLR RWGD++ SS CRLA A S++KK
Sbjct: 624 RGSPEEMAQRVRDMEAELVRKLLAEEDAKSLLDIWVERTREYVLTQTVPPTDAECDFNWSRLRCEPKCTCGARLRFGDYTPGRACRLLHPWERNPELCGSGVNGDDGXXXXXXXXXXXXXXAWDPSDEPAVRRVVAAVAGVLGGLRQAYEARVAPPSDSECSFSFETRRCEPQPLCRLRFRWGDLTPSSACRLAGGASSDEKK 826
BLAST of mRNA_P-fluviatile_contig77.14170.1 vs. uniprot
Match: A0A6H5JPF6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JPF6_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 3.270e-17 Identity = 57/158 (36.08%), Postives = 81/158 (51.27%), Query Frame = 2
Query: 2090 DAKSLLDIWVEKAREYVLTQTVPPTDAECDFSWSRLRCEPKCSCGARLRFGDYTPGRACRLLRPWERSPDLCGEDGAGGVWDPSDEPAYRRVVAAVAGALGGLRRAYEAR-VAPPSDPECRFSL----ETRR--CEPQPLCRLRVRWGDISLSSGCRL 2542
D ++LL+ ++V T+ P TD ECD+SW R RC+P+CSC + RFGDY PGR+CRL ER C + V + +AA G +G + A V P +D +CRFSL E ++ C P+ C ++GD+ CRL
Sbjct: 91 DDEALLERIGRLVVQWVNTRLTPRTDEECDWSWGRWRCDPQCSCQYKYRFGDYAPGRSCRLRPEGERGLATCDPERGNDV-------SLLEKLAAFVGKVGRSTWRFTAEHVVPQTDKDCRFSLAHSLEEKKLVCTPRRHCAFHYKFGDVHPGRSCRL 241
BLAST of mRNA_P-fluviatile_contig77.14170.1 vs. uniprot
Match: A0A7S2UXV6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXV6_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 1.540e-15 Identity = 55/160 (34.38%), Postives = 80/160 (50.00%), Query Frame = 2
Query: 2114 WVEKAREYVLT----QTVPPTDAECDFSWSRLRCEPKCSCGARLRFGDYTPGRACRLLRPWERSPDLCGEDGAGGVWDPSDEPAYRRVVAAVAGALGGLRRAYEARVAPPSDPECRF----SLETRR--CEPQPLCRLRVRWGDISLSSGCRLAAVSEDK 2563
W EK + VLT + VP TD EC + W RC+P+C C + +FGDY+PGRACR L E P+ + AG D S + RVV + + Y + P +D +C+F S ++RR C P C + ++GD+++ CR E K
Sbjct: 31 WAEKISDKVLTFVNEKVVPDTDPECTWHWGHWRCDPQCECKLKYKFGDYSPGRACRSLTFGELDPNC--DPSAGD--DISLLEKFGRVVVVTWRRVALFSKTY---LLPRTDDQCQFAWKESWKSRRPTCSPHASCSFQPKFGDLTVGRACRYKYKEESK 183
BLAST of mRNA_P-fluviatile_contig77.14170.1 vs. uniprot
Match: A0A7S2S8F9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S8F9_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 1.830e-14 Identity = 54/177 (30.51%), Postives = 87/177 (49.15%), Query Frame = 2
Query: 2090 DAKSLLDIWVEKAREYVLTQTVPPTDAECDFSWSRLRCEPKCSCGARLRFGDYTPGRACRLLRPWERSP-DLCGEDG------AGGVWDP-SDEPA-YRRVVAAVAGALGGLRRAYEARV------------------------APPSDPECRFSLETRRCEPQPLCRLRVRWGDIS 2521
D +SL++++ + R +++ P TD EC +SW RCEP+C C + + GDY+P R+CRL+ ++SP ++ G G GV DP + EP+ +++V A A G R+ + V AP +D EC F + +C P+ C + R+GD S
Sbjct: 1 DERSLMEVFGDATRHWLIQHLAPRTDRECHWSWRLARCEPRCLCTFQPKLGDYSPNRSCRLV---QKSPAEITGGAGNDNSRDGNGVCDPDAPEPSGWQKVRHATAAMRRGSLRSLSSCVQALGTGASSLSRLAVRLGNGLRSRAPVTDEECHFVFDGLQCVPEEFCSFQYRFGDYS 174
BLAST of mRNA_P-fluviatile_contig77.14170.1 vs. uniprot
Match: A0A7S3NN76_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NN76_9STRA) HSP 1 Score: 87.8 bits (216), Expect = 2.830e-14 Identity = 53/168 (31.55%), Postives = 78/168 (46.43%), Query Frame = 2
Query: 2087 EDAKSLLDIWVEKAREYVLTQTVPPTDAECDFSWSRLRCEPKCSCGARLRFGDYTPGRACRLLRPWERSPDLCGED-----------------GAGGVWDPSDEPAYRRVVAAVAGALGGLRRAYEARVAPPSDPECRFSLETRRCEPQPLCRLRVRWGDISLSSGCR 2539
++ SLL+++ ++VLT+ +P T EC + W++ C PKC C R+GD T RACRL+ E +P+ C D G+ +W ++E + + APPSD C FS + RCEPQP C R ++GD L CR
Sbjct: 115 DEEMSLLEMFAGATSDFVLTKLLPRTHPECRWHWAKAVCVPKCKCQLAYRWGDLTMSRACRLVD--EPNPN-CDTDVRHERGSLEKLGDAIWIGSTTIWQNANE--------------------FLQQAAPPSDIRCDFSWQNLRCEPQPYCAFRYKFGDYHLGRACR 259
BLAST of mRNA_P-fluviatile_contig77.14170.1 vs. uniprot
Match: A0A7R9ZJ95_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZJ95_9STRA) HSP 1 Score: 68.9 bits (167), Expect = 9.560e-9 Identity = 28/63 (44.44%), Postives = 43/63 (68.25%), Query Frame = 2
Query: 2081 AEEDAKSLLDIWVEKAREYVLTQTVPPTDAECDFSWSRLRCEPKCSCGARLRFGDYTPGRACR 2269
AE+D ++LLD++ E A+E++ + +PPTD +C + W RCEP C+C + GDY GR+CR
Sbjct: 96 AEQDDRTLLDVFGEAAKEFLTQKLIPPTDTDCRWDWRFARCEPFCACAFAPQRGDYHLGRSCR 158
BLAST of mRNA_P-fluviatile_contig77.14170.1 vs. uniprot
Match: A0A7S0CLR0_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CLR0_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 1.140e-5 Identity = 28/70 (40.00%), Postives = 39/70 (55.71%), Query Frame = 2
Query: 2084 EEDAKSLLDIWVEKAREYVLTQTVPPTDAECDFSWSRLRCEPKCSCGA-----RLRFGDYTPGRACRLLR 2278
E+D ++ LD + E ++ + +P TDAECDF W LRCEP CG FGD+ GR+C + R
Sbjct: 143 EDDERTYLDTFGEVSKIIMTHHVIPETDAECDFDWRSLRCEPHDICGGGGCRFEYEFGDFHLGRSCWIFR 212 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig77.14170.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig77.14170.1 >prot_P-fluviatile_contig77.14170.1 ID=prot_P-fluviatile_contig77.14170.1|Name=mRNA_P-fluviatile_contig77.14170.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=785bp MLACTHNVLMADRRRPQGVLLHHRKMKALTATLTMAILLSGCTSENSNYNback to top mRNA from alignment at P-fluviatile_contig77:424956..429386+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig77.14170.1 ID=mRNA_P-fluviatile_contig77.14170.1|Name=mRNA_P-fluviatile_contig77.14170.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4431bp|location=Sequence derived from alignment at P-fluviatile_contig77:424956..429386+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig77:424956..429386+ >mRNA_P-fluviatile_contig77.14170.1 ID=mRNA_P-fluviatile_contig77.14170.1|Name=mRNA_P-fluviatile_contig77.14170.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4710bp|location=Sequence derived from alignment at P-fluviatile_contig77:424956..429386+ (Porterinema fluviatile SAG_2381)back to top |