mRNA_P-fluviatile_contig77.14152.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig77.14152.1 vs. uniprot
Match: D7FHW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHW6_ECTSI) HSP 1 Score: 309 bits (791), Expect = 3.920e-89 Identity = 245/552 (44.38%), Postives = 301/552 (54.53%), Query Frame = 1
Query: 70 MEERIRLEVQA----HVSQRVSLAERAAEAAKQRADGLAEEVSNLGEIVRRSNASTT---TALEQLLAGEQRSRSAVTLLETWRADHQGWCARTDDSLTSLAEDSRALARRAHAQQKVLDEVVIAQEDLASSVKSSRKIGEAASASAVAPIREHFLKEIETIRRRLLDLEVKAQRRAMTVGPDVIPPQLIDLAREEASAKAEEVWRKVKTHLRENLAEEAERDAHAATADRKRLELRLAEVEQRVDAHGFTLETLQQAQRETLRAAKAAAARDAMTTLEMRLADGLARINEELRDMRSRENRHAA--AAXXXXXXXXXXXXPSSPPDTLAWEKDLRPILQRLEELEGLRERPFPADQPLTTATAPSPASAEMVERIDAKVQDLVSGAGMISRRQTTLENSLEEVNETLSGHTLKLRCLEGLWRQVGSQEGDGAAAEGAVNSSXXXXXXXXXXXXXXXXXXXXXRDSNETSNTGACARAPNSSSIGEGGHPSASTATAPARRAGFAGLLKRLGSNPLSSSQKEVSAGSSRASSESGRSTPRSDPTPGSVSDVQ 1698
ME+RI+LEVQ V QRVSLAERAAEA +QR DGLAEEV++LGEIVRRS+A+TT TALEQL A +QR+RS VTLLETWRAD +GWCART +SL SL EDSRAL+RRAH QQK L EV +AQEDLA VKS+R++GEAASASA+APIREHFL+EIETIRRRL LE +AQ A V P + +A EEASAKAEEV E+RV A+G LET ++A+ + R A RD M L+ RLA+ LARI++EL D+RSR +R+AA A S D L +DL+P+ +RL+ELE L ER P D T TAPS A+ E VE I VQ++ GA SR++ ENS + ++ L K + L V EG AA+ TAPA R G +GLLKRLGSN LSS QKEV ++ +E G T R P+ G +D +
Sbjct: 1 MEDRIKLEVQTVVRRDVDQRVSLAERAAEAVRQRVDGLAEEVASLGEIVRRSSATTTAHATALEQLQASQQRTRSTVTLLETWRADREGWCARTSESLHSLTEDSRALSRRAHTQQKALGEVEVAQEDLAVLVKSTRRVGEAASASAMAPIREHFLQEIETIRRRLSALENEAQTTATAAVSGVDPTMVKSIAVEEASAKAEEV-------------------------------------ERRVSAYGPALETHKKAEGDISRGALGV--RDTMEALQKRLAENLARIDDELCDLRSRHDRNAAKTAETAALSAIEQQQVTQSVSDGLDGRQDLKPLAKRLDELERLWERKTPTDLTPATVTAPSSAAVEKVEGIAKTVQEMALGAEAASRQRAIFENSGRK-HQNLEQQQQKQQHLHAGAMPV---EGHAVAAQ-----------------------------------------------------------TAPAFRTGLSGLLKRLGSNSLSSGQKEVGTNAADKDNEVGLGTQR--PSLGETTDSE 448 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig77.14152.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig77.14152.1 >prot_P-fluviatile_contig77.14152.1 ID=prot_P-fluviatile_contig77.14152.1|Name=mRNA_P-fluviatile_contig77.14152.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1102bp PPVPSPPYSSHVAARVDRARTDGMEERIRLEVQAHVSQRVSLAERAAEAAback to top mRNA from alignment at P-fluviatile_contig77:276802..285522+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig77.14152.1 ID=mRNA_P-fluviatile_contig77.14152.1|Name=mRNA_P-fluviatile_contig77.14152.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8721bp|location=Sequence derived from alignment at P-fluviatile_contig77:276802..285522+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig77:276802..285522+ >mRNA_P-fluviatile_contig77.14152.1 ID=mRNA_P-fluviatile_contig77.14152.1|Name=mRNA_P-fluviatile_contig77.14152.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6612bp|location=Sequence derived from alignment at P-fluviatile_contig77:276802..285522+ (Porterinema fluviatile SAG_2381)back to top |