mRNA_P-fluviatile_contig77.14143.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig77.14143.1 vs. uniprot
Match: D8LTB9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTB9_ECTSI) HSP 1 Score: 232 bits (591), Expect = 5.270e-72 Identity = 116/127 (91.34%), Postives = 120/127 (94.49%), Query Frame = 3
Query: 405 AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRATFLAFVGVLCFSLGTILAYIAGGLMMANAVFNFYVIFKYPEFERDQQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQAAASTYV 785
AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRA FL FVGVLCFSL + +A++AG LMM NAVFNFYVIFKYPEFERD QRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQAAASTYV
Sbjct: 95 AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRAVFLIFVGVLCFSLNSDIAFVAGALMMVNAVFNFYVIFKYPEFERDLQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQAAASTYV 221
BLAST of mRNA_P-fluviatile_contig77.14143.1 vs. uniprot
Match: A0A836CFZ2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ2_9STRA) HSP 1 Score: 159 bits (403), Expect = 1.480e-44 Identity = 79/127 (62.20%), Postives = 101/127 (79.53%), Query Frame = 3
Query: 405 AFSCILCCFETHLKVVAKTIAANFGFLYNAKGRATFLAFVGVLCFSLGTILAYIAGGLMMANAVFNFYVIFKYPEFERDQQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQAAASTYV 785
AF+CILCCFETH+ +A A+NFGFLYNAKGRA FL FVG+LCFS G+IL YI+G M+A+++FNF+VI KYPE + +QQRKDLES RD++R N+GA+A+ GV FA+NNP A A+ A ST+V
Sbjct: 41 AFACILCCFETHISFIASLAASNFGFLYNAKGRALFLLFVGILCFSFGSILGYISGIAMIADSIFNFFVILKYPEVQ-NQQRKDLESSSRDFVRNNQGAIARQGVAFAQNNPQQAAAAARTA-STFV 165
BLAST of mRNA_P-fluviatile_contig77.14143.1 vs. uniprot
Match: A0A482T2R9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T2R9_9ARCH) HSP 1 Score: 119 bits (299), Expect = 6.280e-29 Identity = 63/127 (49.61%), Postives = 85/127 (66.93%), Query Frame = 3
Query: 408 FSCILCCFETHLKVVAKTIAANFGFLYNAKGRATFLAFVGVLCFSLGTILAYIAGGLMMANAVFNFYVIFKYPEFERDQQRKDLESEGRDYLRANRGALAQ-------AGVEFARNNPDLARKGAQA 767
FSC+LCCFETHLK V+K IA NFGF+Y+AK R+ F+ F+G + FS ++ I G M+ANA FN + +F+YP++E D QRKD +SE +DYL +N Q A E R NP++AR+G QA
Sbjct: 27 FSCLLCCFETHLKQVSKIIAMNFGFMYSAKSRSLFMIFIGTILFSF-SLFGKIIGLCMLANAGFNLFAVFRYPQYE-DMQRKDAQSEIQDYLASNPAFAKQIVDAGLKASTEVLRQNPEIARQGTQA 151
BLAST of mRNA_P-fluviatile_contig77.14143.1 vs. uniprot
Match: W7TT71_9STRA (Golgi apparatus membrane protein TVP15 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TT71_9STRA) HSP 1 Score: 112 bits (279), Expect = 4.010e-25 Identity = 70/148 (47.30%), Postives = 87/148 (58.78%), Query Frame = 3
Query: 321 LSAASRFPPFVFADVTPLSRTSSGLPHSAFSCILCCFETHLKVVAKTIAANFGFLYNAKGRATFLAFVGVLCFSLGTILAYIAGGLMMANAVFNFYVIFKYPEFERDQQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQ 764
+SAA+ V A TP S + AFSC+LCCFE +L+ VAK IA NFGFLY+AK RATFL FVGVLCFSLG I +AG M+ANA+FN V+ KYP++ + E E +F + NP LARKGA+
Sbjct: 97 MSAAAVLTVIVPAGATPASWVLAFYV-LAFSCLLCCFEVNLRRVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEA---------------AQFMQRNPGLARKGAR 227
BLAST of mRNA_P-fluviatile_contig77.14143.1 vs. uniprot
Match: A0A4D9D7K6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D7K6_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 1.540e-15 Identity = 46/90 (51.11%), Postives = 59/90 (65.56%), Query Frame = 3
Query: 447 VVAKTIAANFGFLYNAKGRATFLAFVGVLCFSLGTILAYIAGGLMMANAVFNFYVIFKYPEFERDQQRKDLESEGRDYLRANRGALAQAG 716
+VAK IA NFGFLY+AK RATFL FVGVLCFSLG I +AG M+ANA+FN V+ KYP++ + E E +++ N G + G
Sbjct: 123 LVAKHIANNFGFLYDAKSRATFLIFVGVLCFSLG-ITGKVAGAAMIANALFNTVVLCKYPQYATNAPTTTAEQEAAQFMQRNPGLARKVG 211
BLAST of mRNA_P-fluviatile_contig77.14143.1 vs. uniprot
Match: A0A485L7T0_9STRA (Aste57867_16065 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L7T0_9STRA) HSP 1 Score: 75.1 bits (183), Expect = 3.850e-12 Identity = 50/145 (34.48%), Postives = 71/145 (48.97%), Query Frame = 3
Query: 408 FSCILCCFETHLKVVAKTIAANFGFLYNAKGRATFLAFVGVLCFSLGTILAYIAGGLMMANAVFNFYVIFKYPEFERDQQRKDLESEGRDYLRANRGALAQAGVEFARNNPDLARKGAQAAASTYV*A*RQ---ARGDKRDWGSH 833
F + FE L + I NFGFLY+ GRA F+ F+G + F G L Y+AG +M ANA+ NFYV+FK+PEF + A +Q ++ ++NPD+A + A+ Y A Q A +GSH
Sbjct: 82 FGVLFLLFECRLSSLEPKIRENFGFLYSYAGRARFIFFIGFMDFGTGGGLGYLAGVIMCANALLNFYVMFKHPEFASGNLSSASDPT------AGYAPASQEATKYLQSNPDIAMQ-----ATNYAFAQAQTIGANNSSASYGSH 215
BLAST of mRNA_P-fluviatile_contig77.14143.1 vs. uniprot
Match: A0A1E7FDQ5_9STRA (Uncharacterized protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDQ5_9STRA) HSP 1 Score: 64.7 bits (156), Expect = 1.570e-8 Identity = 33/98 (33.67%), Postives = 56/98 (57.14%), Query Frame = 3
Query: 417 ILCCFETHLKVVAKTIAANFGFLYNAKGRATFLAFVGVLCFSLGTILAYIAGGLMMANAVFNFYVIFKYPEFERDQQRKDLESEGRDYLRANRGALAQ 710
++CC ET LK + IA NFGFL+N+ R F +G +C++ G ++ I GG + AVFN Y++ +YP + + +++ E + R R ++ Q
Sbjct: 105 LICCLETQLKFLRVMIAVNFGFLFNSVWRFLFYLILGSVCWTFG-LMGKIMGGCLAGVAVFNTYILCRYPSYRKIREKVAEEEDKRIEARISKEVKQQ 201
BLAST of mRNA_P-fluviatile_contig77.14143.1 vs. uniprot
Match: A0A448Z155_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z155_9STRA) HSP 1 Score: 63.9 bits (154), Expect = 2.380e-8 Identity = 34/106 (32.08%), Postives = 59/106 (55.66%), Query Frame = 3
Query: 417 ILCCFETHLKVVAKTIAANFGFLYNAKGRATFLAFVGVLCFSLGTILAYIAGGLMMANAVFNFYVIFKYPEFERDQQRKDLESEGRDYLRANRGALAQAGVEFARN 734
++CC ET LK + IA NFGFL+N+ R F +G +C++ G I+ +M A+FN YV+ +YP + + +++ E + R R ++ QA + A++
Sbjct: 91 LICCLETQLKFLRVMIAVNFGFLFNSFWRFLFYLILGSVCWAFGGIMGRTMACVMGGVALFNTYVLCRYPSYRKIREQIAEEEDKRIEARVSKEVKTQALKQMAKS 196
BLAST of mRNA_P-fluviatile_contig77.14143.1 vs. uniprot
Match: A0A7S1YXP4_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1YXP4_TRICV) HSP 1 Score: 63.5 bits (153), Expect = 6.230e-8 Identity = 35/99 (35.35%), Postives = 54/99 (54.55%), Query Frame = 3
Query: 417 ILCCFETHLKVVAKTIAANFGFLYNAKGRATFLAFVGVLCFSLGTILAYIAGGLMMANAVFNFYVIFKYPEFERDQQRKDLESEGRDYLRANRGALAQA 713
++CC ET LK + IA NFGFL++ R F +G +C++ +I G M+A AVFN YV+ +YP + + + + E + R R +R QA
Sbjct: 142 LVCCLETQLKFLRVIIAMNFGFLFSYFYRFLFYLILGTVCWAYNSIFGKATGICMVAVAVFNTYVLIRYPSYRKMRDKIAEEEDKRIEARISREVKKQA 240
BLAST of mRNA_P-fluviatile_contig77.14143.1 vs. uniprot
Match: A0A7S3Q0I5_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q0I5_9STRA) HSP 1 Score: 61.2 bits (147), Expect = 1.470e-7 Identity = 33/91 (36.26%), Postives = 52/91 (57.14%), Query Frame = 3
Query: 402 SAFS----CILCCFETHLKVVAKTIAANFGFLYNAKGRATFLAFVGVLCFSLGTILAYIAGGLMMANAVFNFYVIFKYPEFE--RDQQRKD 656
SAFS C++CC ET LK + IA +FGFL++ R F + +C SL + + G ++A AV+N +V+ +YP + RD+ K+
Sbjct: 65 SAFSLFGGCLVCCLETQLKAIRTFIAIDFGFLFDPTLRFFFYLLLASVCLSLKDLFGLVMAGCLVAAAVYNTFVLCRYPAYRKLRDELAKE 155 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig77.14143.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig77.14143.1 >prot_P-fluviatile_contig77.14143.1 ID=prot_P-fluviatile_contig77.14143.1|Name=mRNA_P-fluviatile_contig77.14143.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=178bp MSGPPSFARPPRDTSRLVDPSPLSAASRFPPFVFADVTPLSRTSSGLPHSback to top mRNA from alignment at P-fluviatile_contig77:198893..201853- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig77.14143.1 ID=mRNA_P-fluviatile_contig77.14143.1|Name=mRNA_P-fluviatile_contig77.14143.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2961bp|location=Sequence derived from alignment at P-fluviatile_contig77:198893..201853- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig77:198893..201853- >mRNA_P-fluviatile_contig77.14143.1 ID=mRNA_P-fluviatile_contig77.14143.1|Name=mRNA_P-fluviatile_contig77.14143.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1068bp|location=Sequence derived from alignment at P-fluviatile_contig77:198893..201853- (Porterinema fluviatile SAG_2381)back to top |