mRNA_P-fluviatile_contig76.14092.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig76.14092.1
Unique NamemRNA_P-fluviatile_contig76.14092.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14092.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig76contigP-fluviatile_contig76:297716..304036 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size282
Cds size192
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig76.14092.1prot_P-fluviatile_contig76.14092.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig76 297716..298116 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817190.2924256-CDS-P-fluviatile_contig76:297715..2977961622817190.2924256-CDS-P-fluviatile_contig76:297715..297796Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 297716..297796 +
1693571453.271381-CDS-P-fluviatile_contig76:297715..2977961693571453.271381-CDS-P-fluviatile_contig76:297715..297796Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 297716..297796 +
1622817190.3120208-CDS-P-fluviatile_contig76:298005..2981161622817190.3120208-CDS-P-fluviatile_contig76:298005..298116Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 298006..298116 +
1693571453.2796044-CDS-P-fluviatile_contig76:298005..2981161693571453.2796044-CDS-P-fluviatile_contig76:298005..298116Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 298006..298116 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817190.3244135-UTR-P-fluviatile_contig76:298116..2981211622817190.3244135-UTR-P-fluviatile_contig76:298116..298121Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 298117..298121 +
1693571453.2885792-UTR-P-fluviatile_contig76:298116..2981211693571453.2885792-UTR-P-fluviatile_contig76:298116..298121Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 298117..298121 +
1622817190.3345912-UTR-P-fluviatile_contig76:303952..3040361622817190.3345912-UTR-P-fluviatile_contig76:303952..304036Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 303953..304036 +
1693571453.2988575-UTR-P-fluviatile_contig76:303952..3040361693571453.2988575-UTR-P-fluviatile_contig76:303952..304036Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 303953..304036 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig76.14092.1

>prot_P-fluviatile_contig76.14092.1 ID=prot_P-fluviatile_contig76.14092.1|Name=mRNA_P-fluviatile_contig76.14092.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=64bp
GEYVVKSYAAEPNGLHLWCGKREWRKKVQQIIDDRKFLKATGGSSASAAA
TPCSTVTENFADS*
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mRNA from alignment at P-fluviatile_contig76:297716..304036+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig76.14092.1 ID=mRNA_P-fluviatile_contig76.14092.1|Name=mRNA_P-fluviatile_contig76.14092.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6321bp|location=Sequence derived from alignment at P-fluviatile_contig76:297716..304036+ (Porterinema fluviatile SAG_2381)
GGGGAATACGTTGTTAAGTCCTACGCTGCGGAGCCCAACGGCCTTCACCT
ATGGTGTGGTAAACGAGAGTGGCGGAAAAAGGTAATCACGTCCCTTTAAT
TAATACGGGTTCCATTACGACACCGCTCTTTCACTAAACGCTGACTTCGT
CGTTTGAAACGCCGTTGGACCCATATTTTGGCTTCGTGCCCAAACAGCAG
CGCGAGACGCTTGTGCCGCACATTTGATGCTTCATGTGACACAATATCCA
ACCTCTCGTTTTTTTCCCCCGCCCTCTCTTGTGTTTGGAGGTGCAACAAA
TAATAGACGACAGGAAGTTTCTGAAGGCTACGGGAGGGTCATCCGCGTCA
GCGGCAGCCACTCCCTGCTCCACGGTCACGGAGAACTTCGCCGACTCCTG
ATCTGTGTGAGTTTCATCTGTTTTTCTGCATCTTTCAGACAAGGCGGTTA
CGCTCTACGACATTACGGCGGTTACGCCCTAGCGATGACCGGTTCAAACG
ACCGGTCACCGGCTTATCAACACATTATTAAGGCGGTTACGCTCTGCTTT
TTCGCTCTATTGATGAACGGCTTAGACAACCGGTCACCGGCCAATCAAGA
AAGCATACACCATATGTCGATGAACGGTTCAAACAACCGGTCACCGGCTA
ATCTATCTCATGCTGAAGAACACTTACACCACAACATGGCTCCTGATCGA
AGAGGATCGAACACAATAACACGTGTATATCAGATTCCCGCTGTCGTTCC
CTGCAATCCAGCAGCCTCGCGCGCTAGGCGTGCTTCCATTCTAGCTGAAA
GGCGCAACCGCAGGCTTCTCGCGTCTCCAAACACGCGTGTCTGCACGCGG
TCACACAATGCTGCTAAAGCCGCACGAGCTACTCGAATGTCCATTCTTGC
CGAGAGGCGTGCAAGTAGACGTGCTGGAAATGACACAAGCTTGGAAATAG
GACGTAATCACTTCGAGAGTGTGCACGCACAACTCAACCAACGCGAATCT
CCGACTGAACCTGCCGAGAGGCGTGCAAGTAGACGTGCTGGAAATGACAC
AACATTGGAAGTAGTACGTAACCACTTCGAGAGTGTGCGTGCACAACTCA
ACCAACGCGAAAATCCGACTGAACCTCAATCTGTACAAGGCCCAAGCACG
GCGCTTGCAATTTTGGACTTCAACAGCATGCCCTTCCCACCTGATACAAG
CTTTTTCGCTGAAACAAGGTTACCAAACTCTCCAAATACCGAATGTCAAC
ACTGTGCCGCCATTTTGTTCAAAGAAGAAAAAACGAATTGCTGTAATCAA
GGCAAGTGCGCGACCTCACCGCTCAAAGAAATTCCTCCAGAGCTGAACAC
AATATTCCAAAGCGTTGAATTTTACAACAATCAACGAATTTACAATTCGT
TGTTCTCCTTTACCGCGATGGCGGCAGTTGGAATAAAAAAAGAAACATGG
ACGAATCCGAAGCCTCCGTCGATGCTAACAATGCATGGCAAAGCGTATCA
TAGGATTTTTGACATGCAAGAGCAATACGCAAATATGAATGTTCAAAATT
CAGCTAGGGTTTACATTTATGACGCTGACTTCGCAGATCAAGTGAAGGCA
TTGCGCATTAATCCCATTACCGCAAACGCCTTGAGAAATCACATACAGGA
CCACATCCCGTGGGCACAGCAGTACAAATCCGCGGTTGACCAGGTCATCA
ACAACTCGGAGGCCACGCATGGCCCAGCTTTCATTGAATTCGCCGAAGTA
AGCAGGGCGATCGACGGGCCTGTTATTGGACAGCCAGTCGCGTCACGTGA
GATAGCAGCATTACTTTTCAAGTCAGACCAACGAAGCACGTCGACACAAC
CAATCATCACCTATCCAAGAGATCGTCCTGACAACAAGCCTCGTTATCTT
CCACTTTGGAGCAGCGCTCTTGAACCACTCCAGTTCCCTCTGCTCTTCTG
CAGCGGTGAACCCGGTTGGAGCAAGGGTCACATCTCAGAGAACCCGTCAT
TTAAGTCACGAACCATGAACCGTGCAAATGACACGCCTGTCCCTTTTTTG
TTCTACTGTCGACAGCGGCTACTGTGTGAAAATTTGTTCAAGACAAACAG
TCGGGTTGCTCAGGAATGATATTGTAGCATGTTTTCTCGTTTCGAAGAAG
AGATTCTCTCGTTCGCCGAAACTGCAGGAGTGCAGCAGAGGATGTTGTCA
TATCGTGCGATCAGTAACAACCCAAACTTATCAGTAGGAACGCTTTTACC
TGCGACCTTCCACTGTTCGCCACTCAAGCATAAAAAGGACACGGAAGACG
CACTCGCAGTTGTCAATCGGCGAGGAAGACCACACGTCATGATAACTGTT
ACATGCAACCCGAGATGGCCGGAAATTGTTGACAATCTGGGCCCTAATCA
AAAAGCGATAGATAGACCAGATCTATGTTGCCGTGTTTTCAAAATAAAAG
CAAAACAAATAATGGATGAAATCAAAAGCGGCAGAGTTTTCGGGACGTAC
GATTTCCACGTATTTACCATCGAGTTTCAGAAACGGGGCTTGCCCCACAT
GCACTGCATCGTGCGTTTTCGGGGCAACGGACCGGAAACACCAGAGATAA
TCGATAAATGGATTTGGGCGCAACTGCCCTCCGAAGACATTGCGGATGGG
AAACTCAGAGAGAAGGTGATCTCTTATATGGTTTACCGGCCATGCAGTGA
CAATCCGAGTTCGCCATGCCTGGAGAAAAAAAGTGGATCTCACACGCTGT
CATGTAACAAAAAGTTCCCTCAACCATGGAGAGACACTTCCGCCATAAAT
GAGAAGACAGGTCGTGCCGAATACTAGAGGATAGACAACGGGGACAGACC
GACCATAGAGCAACGGATCGATGGCAGGGCCACGAACGTCGAAATAAGTA
ACGAATGGATCGTGCCGTACAACCCTTATTTGTTGCTCATGTTTGACTGT
CACATCTGCGTTGACGTTGTTACTGCTCTGTCGTGCGTGAAGTACCTATT
CAAGTACGTAACAAAAGGAAAAGATATGGCTAAGGCGAGGATACAAGGGG
TCACAAGCGAGATTGAACAATACCGAAAAACTCGCTATGTTTCCGCTGCA
GAGGCTATACCTGGCGTATGTTGGGTTACCATCTCCTCAGTCGAAATCCT
TCGGTCACCCTCCTTCATGCCCATCTTGAAGGTCGACACATTGTGGTATA
CCCTCAACACGTTACAGCGGAGGAGCGACAGAGAATAGCAGATGAAAAAG
TTACTGACCTCATGCGATATTTCAGCAGGCCTGCCCCAACAGCCGTAACG
GACCTATCGTGCTGGATTACTTCGAACAATATATCATTAAGAAACGATCA
CGCACTGAACCCATGCGTTCTGCCGCTCCACCAGGGACTTGGCTTGACCT
TTACGGGAATGTCGTTGCCGAGAGGACAACCGCACACGTATGCCGTTTAA
GTTTTCATTCCCCAGCGGTAGGCGATCTATACTACTTGAGGCTGCTGTTG
CATAAGTCATGAGGTAGATTGTTCCGAGACCTTAGGACCCTGCGTACTCC
CAACGGTGAAGGAACGGTCGACCAAACCTTCCAAGAAGCTGCGCGAGCCC
TCGGTCTTCTTGCCGACGACGAAGAGTATTTTATGTGTATGGAAGAAGCG
ACTGTGTTCAAGATCGGTCGACAGCTGCGCGGCCTCTTTGTTTCATTAGT
ACTAGACGGAGCCCCAGCCCCGACGCTCTGGGAGCAATACAAAGATCACC
TCATTGAAGACCTGCTAAGGAGATGCGACAAACAATCTGCCATCCGAGAA
GCACTCAGATTGATAGACCACAGATTACAGCTGCATGGCAAAAACAATGA
ACAGTACGGACTACCGGCCGCAACACACAAAGACACCGAATATGACCGAA
TGAGGTCTTCCTTTGACACACGAGAACAAAGACGGTATGCCGACACGAAT
GAAGTTTTGCTCACAGGCGAGCAACGCTACGTGTACAACCAAGTCGTGGA
TGCCGTTAACAATAACAAGCCTAAGCCTTTTATGATCGACGCACCTGCAG
GAACAGGAAAAACGTTCGTAGAAAAAGTTATAGCCGCAAGGTTGAGGGGT
GAAGGTAAAACCGTCATTGCGGTGGCATCGACAGGCATTGCCGCAATTCA
GCTCCCTGGCGGATGGACTGCGCACAGCATGTTTAAACTACCACTAGATG
AGGGAGTCGTTCCCGGTGCTGTATGTCGCATTACGAGCGAATCTGAAAGA
GCGGATCTCTTGCGTAAATGTGACTTGATAATTTTCGATGAGCTCCCTAT
GATGCACAAATACTGCATCGAAGCCATAGATATCACCCTGCGAGATTCGA
TGAGGAGCAACGTCATCTTTGGAAACAAAACAATGGTAATGAGTGGTGAT
TGGAGACAGACATCACCTGTTGTTCCATTTGGAACGGCGGCGGATACGGT
TGATGCTGCATTCATAACGAGTCCCTTGTGGGAGCAAGTCGTGCGCATGC
GGCTTAGCCTTTCCCAAAGGGACAAAGATGATACCGCATACGCATCGTTT
GTCAGACGTGTAGGAGAGAATAAAATACCTAACGATACATTCCCGGACGG
GTCTTGCCTCATGCCACTTTCCAATGCCTCTGACAAAACCACTGATGATC
ATTTCGCTTTGCCGTTCACCACAGATTTTGAAGATCTTCTTCAGTTTGTT
TACCCCGACAGAAATGAAGATCCTACCGCTTTGCATGATCGTGCCATACT
TGCTACAACGAACGACATTATTGACGAATGCAATCAGAAAATCATGAGCG
AACGTTCACATCCTGTGATTTCGTTTTACAGTGCGGACACGCTCATGCTG
GACGACACCGACCCTAACACAGTGTATGCCTCGCCAGAACACTTGAACAA
CATCAATGTGCCTGGGGTTCCCCCACACAACCTACAGCTACAGAGAGATG
CACTCGCCATGATTACACGCAACTTGAACTTTTCTGAGGGCTTGGTCAAC
GGACAAAAAGTAGTAGTACGACAACTAGCAGCCAATTCAAAAGTAGTTCA
GGTCCAACTACTAAACGCTACAAGAGACATAGCGTTGATTCCACGAATAA
ATTGCAACGTCAAGGTCGGGAAAAATGGTATAAAATTTCGGAGAGTGCAG
TTTCCACTACGGCTGGCATACTCGCTCACCATAAACAAATCCCAGGGTCA
AATTCTGACACGCATAGGATTGGATCTACGGTCACACCCTTTCGGTCACG
GTCAGCTGTATGTCGCCCTTCGTCGCGCTCGAACCAGAGGGTCGATAATG
TGCTTGGTCTCACCCGGTAACATCATGAACGGGATACCACACGTTCAAAA
TGTCGTCTTCAAACCGTTCACTGATGCTGCCACGTCCGTCTTACATCAAC
AAGGCAGCAACCCTGATAGGGGCAATGTCACCAACGGTCAGAACAACGCC
ACGTCAAACAACGCAAACCAGAGTAATTGTTATTCTCATCGCGACAGAGC
CACAAATAGGCAAAACGGCACCATGGGAAAAAACGATAACCAGAGGAGTT
ACTCAAATGGCCAAAACAGCGGCGCAGAATCGAGTAAACGTACCGGGGAT
GAATCGAATCGTCAAGACGGTGACACGACAAAAGGCAGAAACGGTGATCA
TTCCCAGAATACCGATCCAAACGACCCAAAGAGAGACCAACGCGATTGCG
ACAGTCAGCAGAACCCACCACTACCGCAGTACGGTTGGACGGTCACCAAC
GAAATAGGAGACGGTGCATGTATGTTCAGATGCATTGCTCGATATCTGAC
CGGAAACCCTGAAAACCATTTCAACGTAAGGACAGCGGCAGTTCAACACA
TTCTTCACAACCGTGAAATGATCATGCCAAACACAGAGTCACACGATAGC
CCCGGCATAACCTTTGCGCAAGCGATAGCCTCCGGCATCCAAGAGAACGA
CAAGATCATCACCAGGTGGCAAATGCCAATACAATATCAATCCATCCAAC
AATACTTGCATCTTATGTCGCACGCACATGCGTATGGCACTTGCGTCGAA
CTTGCCGCAATCGAACAAGTATTCAACGTAAACACAGATGTAGTCTACGC
TTAAGTCGGGCAATCCCCTCCTGCAGTCCCCCAGCCGAACACATGCTATA
TGAGCTTTGTCCCAGGTCACTACCAAACCCTCACTTGGCATCAACTAGAT
TAATGTTTCCTTTCACCATTCTACATTGCCATACCAGGTTCTCTCGCGCG
GGGTCTTCGCTCGTGTTATGGTTTAAACCTGCGCCTGCGCGACGCAGGCA
TGTCGTACCTGTTCCTGTGTG
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Coding sequence (CDS) from alignment at P-fluviatile_contig76:297716..304036+

>mRNA_P-fluviatile_contig76.14092.1 ID=mRNA_P-fluviatile_contig76.14092.1|Name=mRNA_P-fluviatile_contig76.14092.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=384bp|location=Sequence derived from alignment at P-fluviatile_contig76:297716..304036+ (Porterinema fluviatile SAG_2381)
GGGGAATACGTTGTTAAGTCCTACGCTGCGGAGCCCAACGGCCTTCACCT
ATGGTGTGGTAAACGAGAGTGGCGGAAAAAGGGGGAATACGTTGTTAAGT
CCTACGCTGCGGAGCCCAACGGCCTTCACCTATGGTGTGGTAAACGAGAG
TGGCGGAAAAAGGTGCAACAAATAATAGACGACAGGAAGTTTCTGAAGGC
TACGGGAGGGTCATCCGCGTCAGCGGCAGCCACTCCCTGCTCCACGGTCA
CGGAGAACTTCGCCGACTCCTGAGTGCAACAAATAATAGACGACAGGAAG
TTTCTGAAGGCTACGGGAGGGTCATCCGCGTCAGCGGCAGCCACTCCCTG
CTCCACGGTCACGGAGAACTTCGCCGACTCCTGA
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