mRNA_P-fluviatile_contig76.14070.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig76.14070.1
Unique NamemRNA_P-fluviatile_contig76.14070.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig76.14070.1 vs. uniprot
Match: D7G5C4_ECTSI (Nascent polypeptide-associated complex subunit beta n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5C4_ECTSI)

HSP 1 Score: 276 bits (707), Expect = 4.680e-88
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 1 
Query:  370 MAARERMIARRFGGENATRTGGVRRKKKNVHKTATSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKELAGSFPGGEGGAGDDDDDVPDLVENFEEASK 813
            MAARERMIARRFGG NATRTGGVRRKKKNVHKTATSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKE+AG+FPGGE GAGDD+DDVPDLVENFEEASK
Sbjct:    1 MAARERMIARRFGGANATRTGGVRRKKKNVHKTATSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKEIAGNFPGGEAGAGDDEDDVPDLVENFEEASK 148
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BLAST of mRNA_P-fluviatile_contig76.14070.1 vs. uniprot
Match: A0A7S2GVT8_9STRA (Nascent polypeptide-associated complex subunit beta n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVT8_9STRA)

HSP 1 Score: 198 bits (503), Expect = 3.800e-57
Identity = 107/169 (63.31%), Postives = 133/169 (78.70%), Query Frame = 1 
Query:  340 SMGEEVASDIMAARERMIARRFGGENATRTGG---VRRKKKNVHKTATSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKELAGSFPGGEGG--------AGDDDDDVPDLVENFEEASK 813
            SM +E   ++ AAR RMI++RFG ++ +RTGG   VRRKKK VHKTATSDDKKL +TLK++GVTNIPAIEEVN+F NDG+V+HF  PKVQAS+ ANTYVVSG +ETK L D+LPGIIN+LGQ+NL+ +K++A +  GG  G        A DDDDDVPDLVENFE+ S+
Sbjct:   19 SMADE---EMSAARRRMISKRFGNQSQSRTGGKGTVRRKKKAVHKTATSDDKKLGSTLKKLGVTNIPAIEEVNLFTNDGKVVHFSNPKVQASIAANTYVVSGPNETKALTDMLPGIINQLGQDNLEHIKQIAENMQGGAAGPTDPIDAEASDDDDDVPDLVENFEDISQ 184
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BLAST of mRNA_P-fluviatile_contig76.14070.1 vs. uniprot
Match: A0A8J2WZC4_9STRA (Nascent polypeptide-associated complex subunit beta n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WZC4_9STRA)

HSP 1 Score: 191 bits (484), Expect = 1.100e-54
Identity = 102/159 (64.15%), Postives = 122/159 (76.73%), Query Frame = 1 
Query:  364 DIMAARERMIARRFGGENATRTGG---VRRKKKNVHKTATSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKELAGSFPGGEGGAG------DDDDDVPDLVENFEEASK 813
            D+ AARE+MIARRFGG   +RTGG    RRKKK VHKTATSDDKKL +TLK++GVTNIPAIEEVN+F +DG+VIHF  PKVQAS+ ANTYV+SG +E KKL DLLPGI+N+LG +N+D LK+LA +               D D+DVPDLVENFE+ SK
Sbjct:    2 DVAAAREKMIARRFGGAQQSRTGGKGSFRRKKKTVHKTATSDDKKLGSTLKKLGVTNIPAIEEVNLFTSDGKVIHFSNPKVQASIAANTYVISGPNEAKKLSDLLPGIMNQLGPDNIDHLKQLADNLSNSNKSTSMGEEHDDGDEDVPDLVENFEDVSK 160
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BLAST of mRNA_P-fluviatile_contig76.14070.1 vs. uniprot
Match: A0A6V1P391_HETAK (Nascent polypeptide-associated complex subunit beta n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P391_HETAK)

HSP 1 Score: 185 bits (470), Expect = 1.420e-52
Identity = 101/154 (65.58%), Postives = 120/154 (77.92%), Query Frame = 1 
Query:  376 ARERMIARRFGGENATRTGG---VRRKKKNVHKTATSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKELAGSFPGGEGGAGDDDDD-----VPDLVENFEEASK 813
            AR +MIARRFGG+  TRTGG   +RRKKK VHKTATSDDKKL TTLK++GVTNIPAIEEVN+FK +GEVIHFV PKVQAS+ ANTYV+SG  +TK+LQDLLPGIIN+LG ++L  LK++A S+    G             VPDLVENFE+A+K
Sbjct:    9 ARAKMIARRFGGQTTTRTGGKGSMRRKKKTVHKTATSDDKKLGTTLKKLGVTNIPAIEEVNLFKQNGEVIHFVNPKVQASIAANTYVISGDPQTKQLQDLLPGIINQLGPDSLANLKQIAESYSNAAGXXXXXXXXXXXXXVPDLVENFEDAAK 162
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BLAST of mRNA_P-fluviatile_contig76.14070.1 vs. uniprot
Match: A0A7S2XW83_9STRA (Nascent polypeptide-associated complex subunit beta n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW83_9STRA)

HSP 1 Score: 185 bits (469), Expect = 2.330e-52
Identity = 103/162 (63.58%), Postives = 122/162 (75.31%), Query Frame = 1 
Query:  361 SDIMAARERMIARRFGGENATRTGG---VRRKKKNVHKTATSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKELAGSFPGGEGGAGDDDDDVPD---------LVENFEEAS 810
            +D+ AAR++MIARRFGGE  +RTGG   VRRKKK VHKTATSDDKKL TTLK++GVTNIPAIEEVN+FK +GEVIHF  PKVQAS+ ANTYV+SG SETK+LQ+LLPGIIN+LG +NL  LK++A ++    G AG                 LVENFEE S
Sbjct:    5 TDVQAARQKMIARRFGGEQHSRTGGKGSVRRKKKAVHKTATSDDKKLGTTLKKLGVTNIPAIEEVNLFKENGEVIHFSNPKVQASINANTYVISGMSETKQLQELLPGIINQLGPDNLANLKQIAEAYANTSGAAGXXXXXXXXXXXXXXXXXLVENFEEVS 166
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BLAST of mRNA_P-fluviatile_contig76.14070.1 vs. uniprot
Match: F0YGQ0_AURAN (Nascent polypeptide-associated complex subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YGQ0_AURAN)

HSP 1 Score: 184 bits (467), Expect = 4.290e-52
Identity = 100/166 (60.24%), Postives = 125/166 (75.30%), Query Frame = 1 
Query:  364 DIMAARERMIARRFGGENATRTGG---VRRKKKNVHKTATSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKELAGSFPGGEGGAGDD-------------DDDVPDLVENFEEASK 813
            D++AARE+MIARRFGG   +RTGG   +RRKKK VHKTATSDDKKL +TLK++GVTNIPAIEEVN+F  DG+V+HF  PKVQAS+ ANTYVVSG +E+K+L +LLPGI+N+LG +N++ LK++A S   G G A +                DVPDLVENFE+ SK
Sbjct:    2 DVVAAREKMIARRFGGAQQSRTGGKGSIRRKKKTVHKTATSDDKKLGSTLKKLGVTNIPAIEEVNLFTADGKVVHFSNPKVQASIAANTYVVSGPNESKQLTELLPGIMNQLGPDNINHLKQIADSMSLGSGNAQESAAVGAGAVGIDXXXXDVPDLVENFEDVSK 167
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BLAST of mRNA_P-fluviatile_contig76.14070.1 vs. uniprot
Match: F0YK21_AURAN (Nascent polypeptide-associated complex subunit beta n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YK21_AURAN)

HSP 1 Score: 177 bits (450), Expect = 8.180e-50
Identity = 96/152 (63.16%), Postives = 119/152 (78.29%), Query Frame = 1 
Query:  388 MIARRFGGENATRTGG---VRRKKKNVHKTATSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKELAG--SFPGGEGGAGD-----DDDDVPDLVENFEEASK 813
            MIARRFGG   +RTGG   VRRKKK +HKTATSDDKKL +TLK++GVTNIPAIEEVN+F +DG+V+HF  PKVQAS+ ANTYVVSG +ETK+L +LLPGI+N+LG +N+D LK++A   S+      A       DDD+VPDL+ENFE+ SK
Sbjct:    1 MIARRFGGAQQSRTGGKGSVRRKKKTMHKTATSDDKKLGSTLKKLGVTNIPAIEEVNLFTSDGKVVHFSNPKVQASIAANTYVVSGPNETKQLTELLPGIMNQLGPDNIDHLKQIADKMSYSNRAPSASSKDDEIDDDEVPDLIENFEDVSK 152
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BLAST of mRNA_P-fluviatile_contig76.14070.1 vs. uniprot
Match: A0A6U1BIA3_9STRA (Nascent polypeptide-associated complex subunit beta n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U1BIA3_9STRA)

HSP 1 Score: 174 bits (441), Expect = 2.800e-48
Identity = 101/166 (60.84%), Postives = 128/166 (77.11%), Query Frame = 1 
Query:  352 EVASDIMAARERMIARRFGGENATRTGG---VRRKKKNVHKTATS-DDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKELAGSFPGG-------EGGAGDDDDDVPDLVE-NFEEASK 813
            EV+S+I+AARERMIA+RF G+++T TGG   VRRKKK   +++ + DD KL+TTLK++G TNIP IEEVN+FK DG+VIHFV PKVQAS+ ANTY++SG SETK LQDLLPGI+++LG +NL QL+ LA +   G       EG    DDDDVPDLVE NFE+ S+
Sbjct:    3 EVSSEILAARERMIAQRF-GKSSTATGGKGTVRRKKKAASRSSGARDDAKLSTTLKKLGATNIPGIEEVNLFKEDGKVIHFVNPKVQASIQANTYIISGPSETKPLQDLLPGIVSQLGMDNLAQLQSLAAAQGAGAGMDAVAEGAEDSDDDDVPDLVEGNFEDVSE 167
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BLAST of mRNA_P-fluviatile_contig76.14070.1 vs. uniprot
Match: A0A7S2WUD9_9STRA (Nascent polypeptide-associated complex subunit beta n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WUD9_9STRA)

HSP 1 Score: 174 bits (442), Expect = 2.920e-48
Identity = 95/162 (58.64%), Postives = 126/162 (77.78%), Query Frame = 1 
Query:  343 MGEEVASDIMAARERMIARRFGGENATRTGG---VRRKKKNVHKTATSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKELAGSFPGGEGGAG----DDDDDVPDLVENFEEA 807
            MGEE ++    AR+RMIA+RFGG+   RTGG   +RRKKK VHKTA+SDDKKL+TTLK++GVTNIPAIEEVN+F N G VIHF  PKVQAS+GANTYVVSG +ETK + ++LP I+++LG E+++Q+K+   +  G  G A     ++D++VP+LV +FEEA
Sbjct:   24 MGEETST----ARQRMIAKRFGGQTQARTGGKGSIRRKKKAVHKTASSDDKKLSTTLKKLGVTNIPAIEEVNLFTNGGNVIHFQNPKVQASIGANTYVVSGPNETKTVAEMLPSIMSQLGSESVEQMKQQYAAAMGAGGPAASADAEEDEEVPELVGSFEEA 181
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BLAST of mRNA_P-fluviatile_contig76.14070.1 vs. uniprot
Match: A0A7S2IFA1_9EUKA (Nascent polypeptide-associated complex subunit beta n=2 Tax=Haptolina TaxID=1090112 RepID=A0A7S2IFA1_9EUKA)

HSP 1 Score: 172 bits (435), Expect = 2.100e-47
Identity = 99/173 (57.23%), Postives = 123/173 (71.10%), Query Frame = 1 
Query:  304 YSGASFAGVAAASMGEEVASDIMAARERMIARRFGGENATRTGGVRRKKKNVHKTATSDDKKLTTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQSETKKLQDLLPGIINELGQENLDQLKELAGSFPGGEG----GAGDDDDDVPDLVENFEEAS 810
            +SGA  A  AAA     + ++ +A     +  R GG+     G VRRKKK +HKT T+DDK+L  TLKR+GV NIPAIEEVN+FK++G VIHF  PKVQAS+ ANTYVVSG +ETKKLQDLLPGIIN+LG +NL  LK+LA ++  G         DDD+DVPDLV+NFEEA+
Sbjct:    2 HSGAQAAAAAAAERPPAMNAEKLAKMAAQV--RTGGK-----GSVRRKKKAIHKTTTTDDKRLQNTLKRLGVNNIPAIEEVNLFKDNGTVIHFNNPKVQASIAANTYVVSGHAETKKLQDLLPGIINQLGPDNLANLKKLAETYQSGGAPPPTAGADDDEDVPDLVDNFEEAA 167
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14070.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G5C4_ECTSI4.680e-8896.62Nascent polypeptide-associated complex subunit bet... [more]
A0A7S2GVT8_9STRA3.800e-5763.31Nascent polypeptide-associated complex subunit bet... [more]
A0A8J2WZC4_9STRA1.100e-5464.15Nascent polypeptide-associated complex subunit bet... [more]
A0A6V1P391_HETAK1.420e-5265.58Nascent polypeptide-associated complex subunit bet... [more]
A0A7S2XW83_9STRA2.330e-5263.58Nascent polypeptide-associated complex subunit bet... [more]
F0YGQ0_AURAN4.290e-5260.24Nascent polypeptide-associated complex subunit bet... [more]
F0YK21_AURAN8.180e-5063.16Nascent polypeptide-associated complex subunit bet... [more]
A0A6U1BIA3_9STRA2.800e-4860.84Nascent polypeptide-associated complex subunit bet... [more]
A0A7S2WUD9_9STRA2.920e-4858.64Nascent polypeptide-associated complex subunit bet... [more]
A0A7S2IFA1_9EUKA2.100e-4757.23Nascent polypeptide-associated complex subunit bet... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig76contigP-fluviatile_contig76:105171..110109 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score278.5
Seed ortholog evalue2e-72
Seed eggNOG ortholog2880.D7G5C4
Preferred nameBTF3L4
KEGG koko:K01527
KEGG Pathwayko04214,map04214
GOsGO:0000003,GO:0000578,GO:0001700,GO:0001701,GO:0003002,GO:0003006,GO:0003674,GO:0005215,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005829,GO:0005840,GO:0005844,GO:0005854,GO:0006139,GO:0006351,GO:0006366,GO:0006403,GO:0006457,GO:0006458,GO:0006605,GO:0006612,GO:0006613,GO:0006620,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006914,GO:0007028,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007314,GO:0007315,GO:0007317,GO:0007318,GO:0007350,GO:0007351,GO:0007389,GO:0008104,GO:0008150,GO:0008152,GO:0008298,GO:0008358,GO:0008565,GO:0008595,GO:0009056,GO:0009058,GO:0009059,GO:0009790,GO:0009792,GO:0009798,GO:0009880,GO:0009948,GO:0009952,GO:0009987,GO:0009994,GO:0010467,GO:0010941,GO:0015031,GO:0015833,GO:0016043,GO:0016070,GO:0016236,GO:0018130,GO:0019438,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0030014,GO:0030015,GO:0030154,GO:0032501,GO:0032502,GO:0032504,GO:0032774,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033365,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0035282,GO:0042788,GO:0042886,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043900,GO:0044085,GO:0044087,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044260,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0045047,GO:0045184,GO:0045595,GO:0045995,GO:0046483,GO:0046907,GO:0048468,GO:0048469,GO:0048477,GO:0048519,GO:0048523,GO:0048599,GO:0048609,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0051082,GO:0051083,GO:0051128,GO:0051179,GO:0051234,GO:0051239,GO:0051641,GO:0051649,GO:0051704,GO:0060281,GO:0060284,GO:0060341,GO:0060548,GO:0060810,GO:0060811,GO:0061919,GO:0065007,GO:0070201,GO:0070727,GO:0070972,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0072594,GO:0072599,GO:0072657,GO:0090150,GO:0090304,GO:0097659,GO:1901360,GO:1901362,GO:1901576,GO:1902875,GO:1903429,GO:1904580,GO:1905879,GO:1990904,GO:2000026,GO:2000241
EggNOG free text desc.protein transport
EggNOG OGsKOG2240@1,KOG2240@2759
COG Functional cat.K
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categoryother localisation
Exons4
Model size1611
Cds size474
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig76.14070.1prot_P-fluviatile_contig76.14070.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig76 105513..109314 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817191.6688461-UTR-P-fluviatile_contig76:105170..1055121622817191.6688461-UTR-P-fluviatile_contig76:105170..105512Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 105171..105512 +
1693571456.604535-UTR-P-fluviatile_contig76:105170..1055121693571456.604535-UTR-P-fluviatile_contig76:105170..105512Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 105171..105512 +
1622817191.7343452-UTR-P-fluviatile_contig76:109314..1101091622817191.7343452-UTR-P-fluviatile_contig76:109314..110109Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 109315..110109 +
1693571456.6677287-UTR-P-fluviatile_contig76:109314..1101091693571456.6677287-UTR-P-fluviatile_contig76:109314..110109Porterinema fluviatile SAG_2381UTRP-fluviatile_contig76 109315..110109 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817191.6867416-CDS-P-fluviatile_contig76:105512..1056481622817191.6867416-CDS-P-fluviatile_contig76:105512..105648Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 105513..105648 +
1693571456.6180565-CDS-P-fluviatile_contig76:105512..1056481693571456.6180565-CDS-P-fluviatile_contig76:105512..105648Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 105513..105648 +
1622817191.6986358-CDS-P-fluviatile_contig76:107809..1079261622817191.6986358-CDS-P-fluviatile_contig76:107809..107926Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 107810..107926 +
1693571456.6340744-CDS-P-fluviatile_contig76:107809..1079261693571456.6340744-CDS-P-fluviatile_contig76:107809..107926Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 107810..107926 +
1622817191.711225-CDS-P-fluviatile_contig76:108578..1086351622817191.711225-CDS-P-fluviatile_contig76:108578..108635Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 108579..108635 +
1693571456.6483717-CDS-P-fluviatile_contig76:108578..1086351693571456.6483717-CDS-P-fluviatile_contig76:108578..108635Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 108579..108635 +
1622817191.722615-CDS-P-fluviatile_contig76:109150..1093141622817191.722615-CDS-P-fluviatile_contig76:109150..109314Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 109151..109314 +
1693571456.6578639-CDS-P-fluviatile_contig76:109150..1093141693571456.6578639-CDS-P-fluviatile_contig76:109150..109314Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 109151..109314 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig76.14070.1

>prot_P-fluviatile_contig76.14070.1 ID=prot_P-fluviatile_contig76.14070.1|Name=mRNA_P-fluviatile_contig76.14070.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=158bp
MGEEVASDIMAARERMIARRFGGENATRTGGVRRKKKNVHKTATSDDKKL
TTTLKRIGVTNIPAIEEVNMFKNDGEVIHFVGPKVQASVGANTYVVSGQS
ETKKLQDLLPGIINELGQENLDQLKELAGSFPGGEGGAGDDDDDVPDLVE
NFEEASK*
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mRNA from alignment at P-fluviatile_contig76:105171..110109+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig76.14070.1 ID=mRNA_P-fluviatile_contig76.14070.1|Name=mRNA_P-fluviatile_contig76.14070.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4939bp|location=Sequence derived from alignment at P-fluviatile_contig76:105171..110109+ (Porterinema fluviatile SAG_2381)
GAAAGAGAGGGTGCGAACTGCTTAAGGCTGGTCGACGGGGAAGTTCACGC
TGCGAAGAGAATTCTTGATGTAATTTCGTCCGATACGCGGGTGTGGCACG
TGTAGCTTACCGATACGAAGGCGAAGGCACAAAGTATTGCGGTGCAAAGT
GTGCAGGCGAGAGTGTGCAAGGGCAGCATCGGAGAGAGAGCGAGAAAGAG
CCGGCAGGAGGAACGAGGAACGAGGGAGAGAGAAAGCGATGTGCCCAACC
TCTCCGGCGGGAATTACGCCGTCATAATCTAGGTCGCCTTTCCTCTGCTG
GTTTATTCGGGCGCTTCATTTGCAGGGGTCGCAGCAGCAAGCATGGGGGA
GGAGGTTGCATCAGACATCATGGCTGCGCGAGAGCGCATGATAGCTAGAC
GGTTTGGGGGGGAGAACGCGACTCGGACAGGAGGCGTACGGAGGAAAAAG
AAGAACGTTCACAAGACCGCGACCTCTGGTGAGTCGAAACTGCTATGAGT
AAAGTTGAACTAGAGTGAGGCCTGCTCAAGCAACACCTGCGGCTGTGCTG
ACCTGTCCGCTACCGCACTTTCATGATGAGACCCCCTCCCCCCCCCCCTC
GAAATGCCCGCCTTTCCTTGCTGATCGGTTGTCTTGACTATAGATCCAAT
AGGCAGGGGAGCAACTGCAGCTTCGATGGCGACGGATACCTCCTCATCTT
GATGTCCTTTCTTGTTCACTGTGTCAGTAGAAGCAGAAAAAGCGTGTGGC
AGGATGTTCTTTCGTGGATGTGAAACCTTGAGTGTTGTAGATGGAGGAGG
GTTTTCCGCTTGCGGCGGCAAAGCCAGCGCGGGGCATACTCATGAAGGTC
CCTTTCGAAGCATTAGTAATCTATCACTCAGTTCTGAACAGGATGAGCGC
GCCTTATCGCGAGAGTACCACGATTTCAGTACGTGGCTTGGTACCTGGTG
TCTCCCCGCCCCCTTCCCCCGTCCGTTCGTTTTGCAGCCACTCCTATCCC
ATCCCATCCCATCACATCCTGTCACATCACAAGTCACATCGTCACGCTGC
TGCATCCGTTGCAGACAGTGATCAGAGTTCCGCCCACCTTGCAGTACACT
GAAATGCTTGCACTAGAGGTCCATCCTCCCGGACCAGTTTCCGTGGCCCT
ATCACACGGCAGAAATCATCATTTCCAATATGCTGAACCCCTAACAACTT
CCGGCAACTTCCCCAATACAATCGTTCTCCGCCGACCAACACACACGCGC
CATTTGTGTAGTCCATGACGGGCCCGGGAGTCAAGAGTGCTCGCAAAAAT
ATGAACTGGTACATGCGCACACGGCTTTGAGATGTATCACTGCGCGCATG
CCGCCCTGTGCAAACGAGAACCACTTTCGAGCCATGCCAACGGCGGCCCT
GTTGAGGCGAGACCAATTTATTTCACCGGGAAACATCATAGGCAACGAAT
ATAAATTAAATAGGCATCGAGTTAGCGCGTGTTTCGACTGACCTTTGCCC
AGTGGGTTGATGGGCCGTCAGAAGGATCGGCGTCGGCAAAAGATGCAAGG
AAAATGGTAAGGTTGCGGCGACGTGTAGGCACATACTTCACGGTGCGATA
CGGCTTGTGCTGCAGTAGTTGCTGCCATGCACGGACTCGAGTCTCTCCTG
ACGAGGATTGTCTAAATGAGGCCGATTGGGACGGCATTTTTTTGTTTCGA
CCGAAAGTTTCGTTCGCGCGTTTGCCACACCCCCGCTGTTGAATTTTCGC
TTGCGACCATCATCCGCCCGGACGGTCTTTCGAGCTATGTTCCGTGCAAG
ATATCTGGCTCGTAACTCAGATATTAAGCCCTGTGAAGGGCGCCTTTTCA
TTCAGCAATAGGCGCCTCAAAACCACGAGGGTAGTCTTACAGCTGAGCCG
CTATTCAAGGTCGCAGCTTGTTAACGTTAACCGAGGTTGATCTTGCCTGT
TTGTATCCTCGCCGTATCAATCGCACGCATTGAGTGCCGACATCCATTAT
TTCACTTCAAATAGTCTTGTGGATCAGGGCAGGCTCGTTTTTTGCTGGTT
AATTTGCCATGGCACATGCAGTTTGCCTCGAAGTTTTGAGTGCGGAGACG
TATACCGCTGTTTCTGCGGCTCTTGTGCCGGAACTTGATTCGCTGTCCCG
TGTATTACTGCCTGTTTACCGATTGTGGCACTGCATCGTGACAGTATCCT
CACAAGTACGCACGGAAAAAATCAAGACCCATGGTGGCTGCTGGTTGTAG
GCGCTGGATTGCTTGGGTGCTCGAAAATTTGCGATACAACGTTGGACGTC
GAAATTTGTCGAGCTATCGAAGAGGACGTGGAGATGGGTTTATGCGATGA
GTGCAAGTGAAACATTCAGACGGAATTGAAGACAGCAGTCAGTGTGATTG
AGTCCGTTGTCCCTCGCAGGTTTCATAGCTACCCGAAGGCCTAGTGTGGC
CTTGTTGCAGGAGATGTGCTCAAGATGGCCATGGTGAATCGTTGAGGTGT
CCTCAGCACGACTTGCAAGATTGAATCTCACTTGCAGTGTTTCGTCATGG
AAGTGATACATGAACGAGGATTCATGTAATTTTATGTGGACGCTGCTGTC
GTTGCTCGCTGTTGCTGCGCACCATATTCACGGGGTCAGATGACAAAAAG
CTGACAACGACCCTCAAGAGGATCGGCGTGACCAACATCCCAGCCATCGA
GGAGGTGAACATGTTCAAGAACGACGGCGAGGTCATCCACTTCGTCGGCC
CCAAGGGTGAGTCAATCGACTCAATCGAGCCCGTCAATTCAAACCGATTC
ATAACACCGATCGACATTAGGTATTGGGGGGCAGGTCGGTGGATGGTTGT
ATTTCTCGCGTCGTTGCCGTGAGACTATGCGGTCGATGTCTTGCTTACAA
CGAAACGGATATCTGCGCCCACCTTCCATGAAACTGCTCTCATCAGCTTT
CTACGGGTTCGTGCGTGCTTCCTCACGTGCCGGTATTCCGCTATGTTGAG
ACACACCATTATGTTTTGCGATCGTGCCTGTCCTTTTCATGTCGACACAG
ATTGTTAGGTGAGCCGCCGCTGTCGACACTATCAATTTATTTTTCGATAT
GAGGCCATTGCCCAAAGTCGCGAGATGTTGCGTGAAAATATGATATTCCC
TTGTTTTCTGCAATCGGACGTCATGCTTCGTCGTTTCGTCCCTTCGCTTC
CCTTCCCTTCCCGTCCCTTCGATTCCCCTCGATTCCCTCCCGTCCCTTCC
CCGCCCCGCCCGCATTCGTTCCATGCCTCGTCCGGTTTGTCTTGTGTCGT
GTCTTGTCGTATCGTTTCGTCTCCTGCATTCTACTGCTGGTTGTCTATCG
TGTGCGCGGTCCGATACGGCATAACCCTCGCTCTGTTTGCAACCGTGATC
GCCTACAGTGCAAGCATCCGTGGGCGCGAACACATACGTCGTGAGCGGAC
AGTCTGAGACCAAGAGTGAGTGCGCCACGGAAAGCAGTCAAGTACCAATC
GATTTTCAGACATGGCCATGCCTTCCCCATCTTTTCGCTCTGTAGATATA
GAGGCTGGGTTTGTGCGGCAGTTTACAATCTGATGTACGGTACGAAGCAT
GCTCATCAGATGTGAAACAAAGAACGTGGGGTGTCGTATGTAGAGGGTTC
GTATGGATCACCGCACTTGCAGCTAACAGTCAAAAGAGGTGGAGTCCTTG
TCAGAGTTGTAGGGCTTTTCCGCGAGGATGATGATGGCGAGATGGGGTTG
TCACGGTCCCCGTCGCGTCCGCATCAGCGGGGTTTTAAGAACAGAAGTAT
TGTTGGTCATGTCTACCGGCCCTTCTCCAGGCCAACCACCGCCCGTCTGT
CACAACTGCATTTCCTTTTTTTCAAGATACGCCGAGTGCCTTATTCCTGA
TTCCGTCGTTCTGACTGCGGCAATCCTCGCACATTGTTTGCTGAACCGGC
GCGGCACCGCCTTGTCTCCGCAAACGACAGAGCTGCAGGACTTGCTCCCG
GGCATCATCAACGAGCTGGGACAGGAGAATCTCGACCAGCTAAAGGAGCT
CGCGGGCAGCTTCCCCGGAGGCGAAGGGGGTGCGGGGGATGATGACGATG
ACGTGCCCGACCTCGTGGAGAACTTCGAAGAGGCTTCCAAGTGACTTAAC
TCTACAGCACCAAACTGTAGCTTGATTGCTGGTGTTGCATCTCAGGGCCC
CGTGGGATGGGTTTATGGTGATTGGAGAGGGCGGATGAAGGCACCGACTT
CGGGGAGGCGACCAGCCCCATTGGCCCGTCGTGGGAGCTGTTTGAGGGCT
TGAGTAGGTTGATCTCGGGGGCGCTCTGTTCCTCAAAAACATCCCGAAAA
TCAGGCTTGGGTACTTCCGATGCCGCCATTAGGCGCAAAGAACATCACAT
CCGTACGAGTAATGCATTGGATCCCCCACGTTGCTAACACCTTGCGGAGC
TGCATACAGGAAGGGTGGGACCAAACCACTGTACGCTGTTGATGAGCGAT
TTGATGTACATGACGGCCCGATGTCCAGTGTGCTGTAGGCGTCGTTGTGA
GATACCGATAAGATGTTCGGCCTAGTCTACGCAGCTTTTTCGCAGCCAGG
TCCTTGTACGGATATTCCTGCTCGGCTTAGGTCGAAGCACTGATGTTGCT
CTCGTGTGACATTCTTGCTGCAGAATTCTGATGAGGTTGAAGTGCGAAAA
CGTATCGACAGGGTAGCGAATGGCCATGCGACGAATAAAGGGCAGGTTGG
TTTGCCCCGGCGAAGTCGTGATGATATCCCTGCTGCTTAGGTCGAGACAC
TGATGTTGCTCTCGTGCGACAATTTCGCTGCAGATGTCGGGCGAGGTTGA
TGTGCGAAAACTTGTCGACGGGGTAGCGAATGGGCCCTACGACGTAGAGT
TGGTAGGTTGGTTTGCCCCGGCAAAATCTCTTGCACGAT
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Coding sequence (CDS) from alignment at P-fluviatile_contig76:105171..110109+

>mRNA_P-fluviatile_contig76.14070.1 ID=mRNA_P-fluviatile_contig76.14070.1|Name=mRNA_P-fluviatile_contig76.14070.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=948bp|location=Sequence derived from alignment at P-fluviatile_contig76:105171..110109+ (Porterinema fluviatile SAG_2381)
ATGGGGGAGGAGGTTGCATCAGACATCATGGCTGCGCGAGAGCGCATGAT
AGCTAGACGGTTTGGGGGGGAGAACGCGACTCGGACAGGAGGCGTACGGA
GGAAAAAGAAGAACGTTCACAAGACCGCGACCTCTGATGGGGGAGGAGGT
TGCATCAGACATCATGGCTGCGCGAGAGCGCATGATAGCTAGACGGTTTG
GGGGGGAGAACGCGACTCGGACAGGAGGCGTACGGAGGAAAAAGAAGAAC
GTTCACAAGACCGCGACCTCTGATGACAAAAAGCTGACAACGACCCTCAA
GAGGATCGGCGTGACCAACATCCCAGCCATCGAGGAGGTGAACATGTTCA
AGAACGACGGCGAGGTCATCCACTTCGTCGGCCCCAAGGATGACAAAAAG
CTGACAACGACCCTCAAGAGGATCGGCGTGACCAACATCCCAGCCATCGA
GGAGGTGAACATGTTCAAGAACGACGGCGAGGTCATCCACTTCGTCGGCC
CCAAGGTGCAAGCATCCGTGGGCGCGAACACATACGTCGTGAGCGGACAG
TCTGAGACCAAGATGCAAGCATCCGTGGGCGCGAACACATACGTCGTGAG
CGGACAGTCTGAGACCAAGAAGCTGCAGGACTTGCTCCCGGGCATCATCA
ACGAGCTGGGACAGGAGAATCTCGACCAGCTAAAGGAGCTCGCGGGCAGC
TTCCCCGGAGGCGAAGGGGGTGCGGGGGATGATGACGATGACGTGCCCGA
CCTCGTGGAGAACTTCGAAGAGGCTTCCAAGTGAAGCTGCAGGACTTGCT
CCCGGGCATCATCAACGAGCTGGGACAGGAGAATCTCGACCAGCTAAAGG
AGCTCGCGGGCAGCTTCCCCGGAGGCGAAGGGGGTGCGGGGGATGATGAC
GATGACGTGCCCGACCTCGTGGAGAACTTCGAAGAGGCTTCCAAGTGA
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