mRNA_P-fluviatile_contig76.14063.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig76.14063.1
Unique NamemRNA_P-fluviatile_contig76.14063.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig76.14063.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig76contigP-fluviatile_contig76:49917..50727 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryno signal peptide or anchor
Exons2
Model size177
Cds size177
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817190.107298-CDS-P-fluviatile_contig76:49916..500121622817190.107298-CDS-P-fluviatile_contig76:49916..50012Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 49917..50012 +
1693571453.0480087-CDS-P-fluviatile_contig76:49916..500121693571453.0480087-CDS-P-fluviatile_contig76:49916..50012Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 49917..50012 +
1622817190.1179082-CDS-P-fluviatile_contig76:50646..507271622817190.1179082-CDS-P-fluviatile_contig76:50646..50727Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 50647..50727 +
1693571453.0592642-CDS-P-fluviatile_contig76:50646..507271693571453.0592642-CDS-P-fluviatile_contig76:50646..50727Porterinema fluviatile SAG_2381CDSP-fluviatile_contig76 50647..50727 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig76.14063.1prot_P-fluviatile_contig76.14063.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig76 49917..50727 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig76.14063.1

>prot_P-fluviatile_contig76.14063.1 ID=prot_P-fluviatile_contig76.14063.1|Name=mRNA_P-fluviatile_contig76.14063.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=59bp
MWRWQIVRRQNSSRCFSNGSSAGALTRWQANRVLSGQKGFLSEIEKAISE
TAPRHKLIR
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mRNA from alignment at P-fluviatile_contig76:49917..50727+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig76.14063.1 ID=mRNA_P-fluviatile_contig76.14063.1|Name=mRNA_P-fluviatile_contig76.14063.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=811bp|location=Sequence derived from alignment at P-fluviatile_contig76:49917..50727+ (Porterinema fluviatile SAG_2381)
ATGTGGAGGTGGCAGATTGTCCGTCGCCAGAACAGCAGCCGCTGCTTCAG
CAACGGCAGCTCGGCCGGTGCACTCACCCGGTGGCAGGCCAACCGCGTGG
GAAAGCTGAGCGACATTTCATGCAAGCTGGCCGCGCGTTGCCTAGAGGAC
CACAGCGACGCTCCCGCATTGCTGTTGCGCGGTTGGTGCTTGAAGGGGAG
GGGGAGCATGTGGAAGGGCTTGCTTCTCCTGTTGGCGGGAGGGTGTGCTG
AAGATTGCCTGCTTGGATTTTTTCCTTTTGAAGCTGTGGGATAATATATC
AATTGAGGTTAAACTTGTTCTGTGTCGCACCTAGAGGTGGACTAACACCC
GTTTTGTGTCCGTCATGATGGCGGTGAGAAGAACATTGCCTTCTTGTGCC
GCGGCCATCTGCTTGAGGGCCATGTGGACCATAACGTACCTTTGGCAAGT
CTCATAGATCAAACAAAATACGCCAGACAATACTTTCTGACGCCGAGCTG
CATCAAAGTAGGGGCGACGCCCCTGCCGCAAGATGGTTGTATCTGAAATG
TAAAGGTTCCCGCTGAGAGTCGGCTGTCTGCCCTGCTCGTCGCAGCACGA
GCAACAATCTCTGAAAACATAAGGGCGAAAACACCTTCATGTGTCCACCA
ACACACCGCTTTTTTCATACATTGTATGATTGCAATTAATAACTTTTTTG
CTTGGGGTTTTGGTTCGGTGTCGATCACAGGTGCTCTCTGGACAGAAGGG
TTTCCTATCCGAAATCGAAAAGGCTATTTCCGAAACAGCACCAAGACACA
AGTTGATCCGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig76:49917..50727+

>mRNA_P-fluviatile_contig76.14063.1 ID=mRNA_P-fluviatile_contig76.14063.1|Name=mRNA_P-fluviatile_contig76.14063.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=354bp|location=Sequence derived from alignment at P-fluviatile_contig76:49917..50727+ (Porterinema fluviatile SAG_2381)
ATGTGGAGGTGGCAGATTGTCCGTCGCCAGAACAGCAGCCGCTGCTTCAG
CAACGGCAGCTCGGCCGGTGCACTCACCCGGTGGCAGGCCAACCGCATGT
GGAGGTGGCAGATTGTCCGTCGCCAGAACAGCAGCCGCTGCTTCAGCAAC
GGCAGCTCGGCCGGTGCACTCACCCGGTGGCAGGCCAACCGCGTGCTCTC
TGGACAGAAGGGTTTCCTATCCGAAATCGAAAAGGCTATTTCCGAAACAG
CACCAAGACACAAGTTGATCCGGGTGCTCTCTGGACAGAAGGGTTTCCTA
TCCGAAATCGAAAAGGCTATTTCCGAAACAGCACCAAGACACAAGTTGAT
CCGG
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