mRNA_P-fluviatile_contig75.14054.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig75.14054.1
Unique NamemRNA_P-fluviatile_contig75.14054.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig75.14054.1 vs. uniprot
Match: A0A6H5L0C0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0C0_9PHAE)

HSP 1 Score: 332 bits (850), Expect = 9.480e-101
Identity = 181/246 (73.58%), Postives = 208/246 (84.55%), Query Frame = 1 
Query: 1141 LHTHTGAAGIGGLGSGTGPVSTYSASLETVVETAKRGPAAATSALQGYLSSSITKIDELGPLGAVYFGLLYVLAEVLIIPALPLTTAAGFLFGVAGGTAVVLTSACVAAAISFQLGRTLLRSQVEDLLDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFVEYISGTLIGFLPGTVAYVYGGTVGKELTDGSGLALPWYGFAAAAAGVLFILKTVGTIATNAIEEMEEESDP 1878
            LH HT    +GG G G      +SA++E+ VETAK G +A ++A+Q +LSSS+TK++ELGPLG VYFGLLYVLAEVLIIPA+PLT AAGFLFG AGGTAVVLTSA +AAAISFQLGRTLLR QVE LL+ENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDF+EY+ GTL+GF PGT+AYVYGGT+GK +TDG G  LPWYG+ A AA   ++LKTVG IAT A+EEMEE +DP
Sbjct:  187 LHDHT----LGGGGGGP-----FSATVESAVETAKAGHSAPSTAVQAFLSSSVTKVEELGPLGVVYFGLLYVLAEVLIIPAIPLTAAAGFLFGAAGGTAVVLTSATIAAAISFQLGRTLLRQQVEGLLEENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFLEYMMGTLLGFFPGTLAYVYGGTLGKVVTDGGGTGLPWYGYVAGAALTAYLLKTVGEIATAAVEEMEE-ADP 422
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BLAST of mRNA_P-fluviatile_contig75.14054.1 vs. uniprot
Match: A0A835ZF34_9STRA (Snare associated Golgi protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF34_9STRA)

HSP 1 Score: 221 bits (563), Expect = 6.880e-63
Identity = 114/187 (60.96%), Postives = 142/187 (75.94%), Query Frame = 1 
Query: 1306 IDELGPLGAVYFGLLYVLAEVLIIPALPLTTAAGFLFGVAGGTAVVLTSACVAAAISFQLGRTLLRSQVEDLLDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFVEYISGTLIGFLPGTVAYVYGG-TVGKELTDGSGLALPWYGFAAAAAGVLFILKTVGTIATNAIEEME 1863
            I   GP+G +YFG LYV+AEVL IPALPLT ++G+LFG+ GGT VV+ SA +AA ISF LGRT LR  VE+LL +N KF+A+D AI +EGFK+ILLLRLSPIFPFA+SNYLYG+TSV F EY+  +++GFLPGT+AYVYGG  +G  +  G G  LPWYG+A     V   +K VG IAT A+ E+E
Sbjct:    2 IQSAGPMGYLYFGALYVIAEVLAIPALPLTASSGYLFGLVGGTTVVICSATIAAGISFLLGRTFLRKWVEELLGDNAKFKAIDSAIGREGFKIILLLRLSPIFPFAISNYLYGITSVPFWEYLGASMLGFLPGTIAYVYGGGQLGSLVDGGDGGGLPWYGYALGLVAVAATIKLVGDIATKAVAEIE 188
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BLAST of mRNA_P-fluviatile_contig75.14054.1 vs. uniprot
Match: K0R4C6_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0R4C6_THAOC)

HSP 1 Score: 219 bits (557), Expect = 4.680e-60
Identity = 111/200 (55.50%), Postives = 148/200 (74.00%), Query Frame = 1 
Query: 1279 GYLSSSITKIDELGPLGAV-YFGLLYVLAEVLIIPALPLTTAAGFLFGVAGGTAVVLTSACVAAAISFQLGRTLLRSQVEDLLDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFVEYISGTLIGFLPGTVAYVYGGTVGKELTDGSGLALPWYGFAAAAAGVLFILKTVGTIATNAIEEMEEESD 1875
            G     I+ +D +    AV YFG+ YVLAE+L IPA PLT A+G+LFG   GTA  L SA +AA++SF +G+TLLR  VED+LDENPKFR++D+AI KEGFK+++LLRLSP+FPFALSNYLYG +S+ F  Y  GT++GF PGT AYVYGG +GKELT G   A PWY +A   A ++ ++K +G +AT+ I+ ME++ +
Sbjct:  148 GSFDEIISSLDGMDKQRAVLYFGIFYVLAEILAIPAFPLTAASGYLFGAFPGTATCLFSAAIAASVSFVIGKTLLRGYVEDVLDENPKFRSMDRAIEKEGFKLMVLLRLSPLFPFALSNYLYGASSIRFPSYFFGTILGFAPGTFAYVYGGVIGKELTVGGDSAQPWYVYAGGMAVIVGLIKVIGDVATSVIDAMEDDDE 347
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BLAST of mRNA_P-fluviatile_contig75.14054.1 vs. uniprot
Match: A0A7S1FUG6_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUG6_9STRA)

HSP 1 Score: 214 bits (544), Expect = 8.720e-60
Identity = 114/207 (55.07%), Postives = 150/207 (72.46%), Query Frame = 1 
Query: 1276 QGYLSSSITKIDELGPLGAVYFGLLYVLAEVLIIPALPLTTAAGFLFGVAGGTAVVLTSACVAAAISFQLGRTLLRSQVEDLLDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFVEYISGTLIGFLPGTVAYVYGGTVGKELTDGSGLALPWYGFAAAAAGVLFILKTVGTIATNAIEEMEEESDP*ETFVL 1896
            Q  L+ ++ +I+  G +G +YFG++Y +AE+L IPA+PLT +AG+LFGV  GTAVVL +A VAA++SF LGR  LR  VE +L++NP+F+A+D AI KEGFK++LLLRLSPIFPFALSNYLYGVTSV F  Y  GT++GF PGT+AYVY G  GK LT  +G+A PWY +A   A     +K +  IAT  IE+ME   +  E+  L
Sbjct:   25 QQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDMEAMEEAAESTSL 231
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BLAST of mRNA_P-fluviatile_contig75.14054.1 vs. uniprot
Match: A0A7S0CCP1_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CCP1_9STRA)

HSP 1 Score: 212 bits (540), Expect = 1.080e-59
Identity = 109/196 (55.61%), Postives = 144/196 (73.47%), Query Frame = 1 
Query: 1288 SSSITKIDELGPLGAVYFGLLYVLAEVLIIPALPLTTAAGFLFGVAGGTAVVLTSACVAAAISFQLGRTLLRSQVEDLLDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFVEYISGTLIGFLPGTVAYVYGGTVGKELTDGSGLALPWYGFAAAAAGVLFILKTVGTIATNAIEEMEEESD 1875
            + ++T+I ++GP G  YFG +Y +AE+L IPA+PLT +AG+LFGV  GT +VL SA +AA+ISF +GRTLLRS VE +L E PK + LD+AI+ +GFK++LL+R++PIFPFALSNYLYGVTSV F  Y  GT++GF PGT AYVY G VGK LT G   A PWY +A   A     LK  G IA++ I+ +E+E +
Sbjct:    1 AETVTQIQDMGPSGVAYFGFIYTIAEILAIPAIPLTASAGYLFGVRDGTLIVLLSASIAASISFFIGRTLLRSYVEGILGEYPKLQKLDRAISSQGFKIMLLVRIAPIFPFALSNYLYGVTSVKFWPYFWGTMLGFAPGTFAYVYSGVVGKILTSGDDAAQPWYVYAGGLALFSGFLKIGGDIASDIIDNIEDEEN 196
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BLAST of mRNA_P-fluviatile_contig75.14054.1 vs. uniprot
Match: A0A7S4I716_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4I716_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.220e-59
Identity = 111/197 (56.35%), Postives = 146/197 (74.11%), Query Frame = 1 
Query: 1285 LSSSITKIDELGPLGAVYFGLLYVLAEVLIIPALPLTTAAGFLFGVAGGTAVVLTSACVAAAISFQLGRTLLRSQVEDLLDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFVEYISGTLIGFLPGTVAYVYGGTVGKELTDGSGLALPWYGFAAAAAGVLFILKTVGTIATNAIEEMEEESD 1875
            L + +  ++ +GP G +YFG++Y +AE+L IPA+PLT +AG+LFGV  GTAVVL SA +AAAISF +GRTLLR+ VE +L++ PKF+ +DKAI +EGFK++LLLRLSPIFPFALSNYLYG TS+ F  Y  GT++GF PGT+AYVY G +GK LT  S  A PWY +A     +   LK V  +AT  IE ++EE +
Sbjct:  183 LEAVVKSVEAMGPSGFLYFGIIYTVAEILAIPAIPLTASAGYLFGVTEGTAVVLASASIAAAISFIIGRTLLRTYVESVLEDYPKFKKIDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSIGFWPYFFGTMLGFTPGTIAYVYTGEIGKALTLDSATAEPWYVYAGGMTLLAGCLKVVADVATGIIENLDEEDE 379
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BLAST of mRNA_P-fluviatile_contig75.14054.1 vs. uniprot
Match: A0A7S2K1V4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2K1V4_9STRA)

HSP 1 Score: 216 bits (550), Expect = 2.720e-59
Identity = 111/169 (65.68%), Postives = 138/169 (81.66%), Query Frame = 1 
Query: 1285 LSSSITKIDELGPLGAVYFGLLYVLAEVLIIPALPLTTAAGFLFGVAGGTAVVLTSACVAAAISFQLGRTLLRSQVEDLLDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFVEYISGTLIGFLPGTVAYVYGGTVGKELTDGSGLALPWYGFAA 1791
            L + +++++ +G LG +YFG+ Y +AE+L IPA PLT +AG+LFG+ GGT +VL SA +AA+ISF +GRT LRS VE LL++ PKF+A+DKAI KEGFK+ILLLRLSP+FPFALSNYLYGVTSV FVEY  GTL+GFLPGT+AYVY G VGK LT  SG A PWY +AA
Sbjct:  156 LENIVSQVETMGNLGFLYFGIFYTIAEILAIPAFPLTCSAGYLFGLQGGTTIVLLSASIAASISFLIGRTALRSYVEGLLEKYPKFKAMDKAIGKEGFKLILLLRLSPLFPFALSNYLYGVTSVRFVEYFWGTLLGFLPGTMAYVYSGDVGKALTLDSGNAQPWYVYAA 324
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BLAST of mRNA_P-fluviatile_contig75.14054.1 vs. uniprot
Match: A0A7S1FUT1_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FUT1_9STRA)

HSP 1 Score: 214 bits (544), Expect = 5.340e-58
Identity = 114/207 (55.07%), Postives = 150/207 (72.46%), Query Frame = 1 
Query: 1276 QGYLSSSITKIDELGPLGAVYFGLLYVLAEVLIIPALPLTTAAGFLFGVAGGTAVVLTSACVAAAISFQLGRTLLRSQVEDLLDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFVEYISGTLIGFLPGTVAYVYGGTVGKELTDGSGLALPWYGFAAAAAGVLFILKTVGTIATNAIEEMEEESDP*ETFVL 1896
            Q  L+ ++ +I+  G +G +YFG++Y +AE+L IPA+PLT +AG+LFGV  GTAVVL +A VAA++SF LGR  LR  VE +L++NP+F+A+D AI KEGFK++LLLRLSPIFPFALSNYLYGVTSV F  Y  GT++GF PGT+AYVY G  GK LT  +G+A PWY +A   A     +K +  IAT  IE+ME   +  E+  L
Sbjct:  163 QQLLTDAVVQIEAAGAMGYLYFGVIYTIAEILAIPAIPLTASAGYLFGVLPGTAVVLVAASVAASVSFLLGRYALRGAVEKILEDNPRFKAMDAAIGKEGFKLMLLLRLSPIFPFALSNYLYGVTSVRFWPYFWGTMLGFAPGTLAYVYTGEFGKALTMDAGMAAPWYIYAGGLALGACGIKIIADIATRTIEDMEAMEEAAESTSL 369
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BLAST of mRNA_P-fluviatile_contig75.14054.1 vs. uniprot
Match: A0A448YYH2_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YYH2_9STRA)

HSP 1 Score: 213 bits (541), Expect = 3.710e-57
Identity = 113/190 (59.47%), Postives = 136/190 (71.58%), Query Frame = 1 
Query: 1309 DELGPLGAVYFGLLYVLAEVLIIPALPLTTAAGFLFGVAGGTAVVLTSACVAAAISFQLGRTLLRSQVEDLLDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFVEYISGTLIGFLPGTVAYVYGGTVGKELT-DGSGLALPWYGFAAAAAGVLFILKTVGTIATNAIEEMEEESD 1875
            + +GPLG  YFG+ Y +AE+L IPA+PLT +AG+LFG   GTAVVL SA VAA +SF +GRT LR  VE LL+ENP+F  LDKAI +EGFK++LLLRLSPIFPFALSNYLYG TS++F  +  GTL+GF PGT+AYVY G VGK LT D  G A PWY +    A     LK V   AT  + E+E E D
Sbjct:  206 ESMGPLGVAYFGVAYCIAEILAIPAIPLTASAGYLFGPVQGTAVVLLSASVAAGVSFWIGRTFLREYVEGLLEENPRFGKLDKAIGREGFKLMLLLRLSPIFPFALSNYLYGATSINFSAFFGGTLLGFAPGTIAYVYTGYVGKALTGDAGGDAYPWYVYGGGLALFAAFLKVVADEATRVVREIEAEED 395
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BLAST of mRNA_P-fluviatile_contig75.14054.1 vs. uniprot
Match: A0A7R9WRQ5_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WRQ5_9STRA)

HSP 1 Score: 204 bits (519), Expect = 8.710e-56
Identity = 105/195 (53.85%), Postives = 138/195 (70.77%), Query Frame = 1 
Query: 1285 LSSSITKIDELGPLGAVYFGLLYVLAEVLIIPALPLTTAAGFLFGVAGGTAVVLTSACVAAAISFQLGRTLLRSQVEDLLDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGVTSVDFVEYISGTLIGFLPGTVAYVYGGTVGKELTDGSGLALPWYGFAAAAAGVLFILKTVGTIATNAIEEMEEE 1869
            L   +  +  +GPLGAVYFG+ Y +AE+L IPA+PLT +AG+LFG   GT VVL SA +AAAISF +GRTLLR  VE +L + PKF  +DKAI KEGFK++ LLRLSP+FPFALSNYLYG +S++F  +  GTL+GF PGT+AYVY G VGK LT       PWY +    A +  ++K +   AT  ++E+++E
Sbjct:   73 LERVVDAVASMGPLGAVYFGVAYTIAEILAIPAIPLTASAGYLFGPVQGTGVVLVSASIAAAISFLIGRTLLRDYVEGVLQDFPKFAKIDKAIGKEGFKLMFLLRLSPVFPFALSNYLYGASSINFSAFFWGTLLGFAPGTMAYVYTGYVGKALTTEGSEVYPWYFYVGGLALLSGLIKVLADTATRIVDELDDE 267
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig75.14054.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0C0_9PHAE9.480e-10173.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZF34_9STRA6.880e-6360.96Snare associated Golgi protein-domain-containing p... [more]
K0R4C6_THAOC4.680e-6055.50Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A7S1FUG6_9STRA8.720e-6055.07Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S0CCP1_9STRA1.080e-5955.61Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
A0A7S4I716_9STRA2.220e-5956.35Hypothetical protein n=2 Tax=Odontella aurita TaxI... [more]
A0A7S2K1V4_9STRA2.720e-5965.68Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
A0A7S1FUT1_9STRA5.340e-5855.07Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A448YYH2_9STRA3.710e-5759.47Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7R9WRQ5_9STRA8.710e-5653.85Hypothetical protein n=1 Tax=Craspedostauros austr... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig75contigP-fluviatile_contig75:575550..579778 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score219.9
Seed ortholog evalue1.5e-54
Seed eggNOG ortholog159749.K0R4C6
EggNOG free text desc.SNARE associated Golgi protein
EggNOG OGs2XF17@2836,COG0398@1,KOG3140@2759
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTransmembrane protein Tvp38/TMEM64-like
Ec32 orthologEc-16_003750.1
Exons4
Model size2962
Cds size834
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig75.14054.1prot_P-fluviatile_contig75.14054.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig75 576809..578697 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817189.4504344-UTR-P-fluviatile_contig75:575549..5760631622817189.4504344-UTR-P-fluviatile_contig75:575549..576063Porterinema fluviatile SAG_2381UTRP-fluviatile_contig75 575550..576063 +
1693571451.8675148-UTR-P-fluviatile_contig75:575549..5760631693571451.8675148-UTR-P-fluviatile_contig75:575549..576063Porterinema fluviatile SAG_2381UTRP-fluviatile_contig75 575550..576063 +
1622817189.463763-UTR-P-fluviatile_contig75:576275..5768081622817189.463763-UTR-P-fluviatile_contig75:576275..576808Porterinema fluviatile SAG_2381UTRP-fluviatile_contig75 576276..576808 +
1693571451.8802507-UTR-P-fluviatile_contig75:576275..5768081693571451.8802507-UTR-P-fluviatile_contig75:576275..576808Porterinema fluviatile SAG_2381UTRP-fluviatile_contig75 576276..576808 +
1622817189.5121548-UTR-P-fluviatile_contig75:578697..5797781622817189.5121548-UTR-P-fluviatile_contig75:578697..579778Porterinema fluviatile SAG_2381UTRP-fluviatile_contig75 578698..579778 +
1693571452.2332025-UTR-P-fluviatile_contig75:578697..5797781693571452.2332025-UTR-P-fluviatile_contig75:578697..579778Porterinema fluviatile SAG_2381UTRP-fluviatile_contig75 578698..579778 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817189.475067-CDS-P-fluviatile_contig75:576808..5772631622817189.475067-CDS-P-fluviatile_contig75:576808..577263Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 576809..577263 +
1693571451.8900216-CDS-P-fluviatile_contig75:576808..5772631693571451.8900216-CDS-P-fluviatile_contig75:576808..577263Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 576809..577263 +
1622817189.48799-CDS-P-fluviatile_contig75:577757..5779861622817189.48799-CDS-P-fluviatile_contig75:577757..577986Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 577758..577986 +
1693571451.9005847-CDS-P-fluviatile_contig75:577757..5779861693571451.9005847-CDS-P-fluviatile_contig75:577757..577986Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 577758..577986 +
1622817189.4992564-CDS-P-fluviatile_contig75:578547..5786971622817189.4992564-CDS-P-fluviatile_contig75:578547..578697Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 578548..578697 +
1693571451.9114687-CDS-P-fluviatile_contig75:578547..5786971693571451.9114687-CDS-P-fluviatile_contig75:578547..578697Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 578548..578697 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig75.14054.1

>prot_P-fluviatile_contig75.14054.1 ID=prot_P-fluviatile_contig75.14054.1|Name=mRNA_P-fluviatile_contig75.14054.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=278bp
MHSYGCSLISSFPCSDRPVVTSSRRRPITPSLHTHTGAAGIGGLGSGTGP
VSTYSASLETVVETAKRGPAAATSALQGYLSSSITKIDELGPLGAVYFGL
LYVLAEVLIIPALPLTTAAGFLFGVAGGTAVVLTSACVAAAISFQLGRTL
LRSQVEDLLDENPKFRALDKAIAKEGFKVILLLRLSPIFPFALSNYLYGV
TSVDFVEYISGTLIGFLPGTVAYVYGGTVGKELTDGSGLALPWYGFAAAA
AGVLFILKTVGTIATNAIEEMEEESDP*
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mRNA from alignment at P-fluviatile_contig75:575550..579778+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig75.14054.1 ID=mRNA_P-fluviatile_contig75.14054.1|Name=mRNA_P-fluviatile_contig75.14054.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4229bp|location=Sequence derived from alignment at P-fluviatile_contig75:575550..579778+ (Porterinema fluviatile SAG_2381)
CCTGCCTCGGGCTCGGCGCGCAAACCGTCGTCCCCGCGGCGGAAGCGTGG
ATCTCGACGGCAACACCCACCACCGCGCGCGGCGGAACGTTTTCCGACCG
AATTGCCGCCGCCTACGGGGACATTAACAGATGGGGGCAACGCGGCGAGC
AGAAGCAGCAGAAGCAGCGGCGGCGGCGGGAGGCAACTTGCACGTTTGCC
GTCACCGGTGGTAGCAGCAGCATCGGCGGCTGGGGCACAACCGCACCACC
GCCAGCAGCGACGGCAGCGGCGGCGACATCAGCGCTCCGGCAGCAATCGG
CGTCGGCGTTCTCATCGTCCCGCGCCTCGTTGTTGTTGCCGGCCCGGCCC
TTCGCCATTGCCGGCGGCAGAGGCGGCGGCGCCAACACCGCGGGGTTCGG
TGCCGGCTGGAGAGGGGGGGTAGCGGTGAGGATGTCGATGGCGGAGGAGA
GCGGGGGCAACAACGCAATGCTGGGCGCGCTCGCTGTCGCTGGCGTGGGC
GCCGTTTACTATGCGTGAGTGTGTAACTACCGCCGCTGTACAGCGTTTCG
GGCGATCGATCTTAATGCCCCTCGCACACGTGCAGGGGTAGGTTGTTGTT
TGCCGCTCCCGTTGTTCCCAGTGCGTTTTCGTGCGACGGAGACTTGAGAC
ATTCGACGTTCGACTATTCATAGCCTGCTGCCGCGCTCCTATCATCGTTT
GGATTTGTCCTTTCTTCAACACACAGGGATCATGCAAAGCAGGAGCGGCT
GTTAAAAGCTAGAGACCGCCGCCAATGGAATGCCGTGAAGTATTTAAGCA
GTCGACTTCGGTTCACGAGCACCTGCACCGCAGCGGATAAGGCTCGTGTC
GTATTTTCCTGCCGGAGGACCGTCCACGCGGGCAGTCTCTTGACCCCTTG
CCTGCTCCAAAAGTTTTCCCACGTATTGTTTTGCCTTCTATAACGTTCTG
CGGCCTCCGTGTAGCCTTTAGCAGTGCGGTTTGCGTAATTTGCAAACAAG
GATGTAGGCAGTCGGAAAGTCAGCGCGACACCTGTGGCAACTGAGCACCG
AGGTGGTCTTCACACTTATCCAGCTGCTGACAGACGCGTCTGTGCGGTTG
GCCTGTCGATAGTGGAAGAGCCCGACAACGCGGGGCATACTAAACTTTTT
TGCATTGCTTGAAGCAGGGAGATTCACTTCTTATTCCTTTTTCCAGGAAT
CAAGTGTCCAAAAAGTGCCAGCAGAAGTTGATTTAAGATGTGTGTTTCAA
CTCAACATTATGCATTCCTACGGCTGCTCCCTCATTTCCTCATTTCCTTG
TTCCGACCGACCTGTTGTAACTTCATCGCGCCGTCGTCCCATCACACCCA
GCCTTCACACTCACACCGGTGCCGCCGGCATCGGGGGCCTCGGCTCGGGC
ACTGGCCCCGTCTCCACCTACTCGGCCTCCCTCGAGACCGTCGTGGAGAC
GGCCAAAAGGGGGCCCGCCGCGGCCACCTCGGCGCTCCAGGGCTACCTCT
CGAGCAGCATCACCAAGATCGACGAACTGGGCCCCCTGGGGGCGGTGTAC
TTCGGCCTGCTGTACGTGCTGGCGGAGGTGCTCATCATCCCCGCCCTGCC
GCTCACCACGGCGGCGGGCTTCCTGTTTGGCGTGGCCGGGGGCACCGCAG
TCGTCCTGACCAGCGCCTGCGTCGCCGCGGCGATTTCGTTCCAGCTTGGC
CGCACGCTGTTGAGGTGTGAGCGCCGGGATGATTTCATTGATTTTTGCTC
GTGCACGACTCGACGGAGGCCGTCTCCCCCAATCCTCCCGTACCCGCATG
ATACGGTCTGCCAGAGAGCAATGCGAGGGATTTCCAACAACCAGCTGCGT
TGCTTGTAGTTTGCTTTGCTGCACCTCGGCTTGGACCTGCTCACTGGCAG
AGGAACCCTATGAAGAGAACTAGCGAATGTTTCTGCGAGTCCTGCCGCAC
GGGGTACTCCTCCTTCACGATTCCGATTTGTCGTCGTCGTCTATCAGCGT
CCGGCGCCTTTCGAGGAGCGGCGACAGCAGGGCGGATACAACACGTGAGC
GCGTGCGTGTCTACAACCAGGACCACGGTGTGCCTCAGCGAGCCCGCCAA
AGTTTATCAACCCCCCACACTTGCGGGGTACTAATGCCTCGGTACCCATG
GCCCGCTGTCGCTCTCATTCGTGTACGATTCTCGCGACAACACATCGGGG
AAATGAAGGTCTCAGGTGGAAGACCTCCTCGACGAGAACCCCAAGTTCCG
CGCGCTTGACAAGGCCATCGCGAAGGAGGGTTTCAAGGTGATCCTGCTCT
TGAGACTAAGCCCCATCTTCCCGTTCGCCCTGAGCAATTACCTCTACGGG
GTGACGTCGGTCGACTTCGTGGAGTACATTTCGGGTACCCTCATCGGCTT
CCTGCCCGGGACGGTGGCCTACGTGTACGGGGGCACGGTGCGTTGAAGAA
TGTTGTTGTTGTTGTTATTATTGTTTTGTTCGGTGTTGCTATGATTGTTG
TTATTGCTGCTGCCGCTGCTGCTGCTACACTTTCGATACCTTCCTCTTCT
TTTTGGCCTGGGGTTTATTCAGGCCGCTGGGCGTTTGCTGCGCGTTTCCA
CCACTGTCAGATTGTCGACACCCCCGCGGTCAATTTCGTAGCTGTTGTTC
TTTGCTCCATTGCGTTTACCGGTGGCCGTTGCTGTCACCGCAATTATACG
TTGTGCTACTTTTTGTAACTCTGCACTATCTTGGCTGCTGCACGATCTCT
GCTGTCGTCTTTGGGGTCAGAGCCTTGTGGCGATTTTTCGTGTCAGTCAG
CGGCATAAACGAACCGAGGCCCCAGCCCGAACGGCCTGTCATGCCTCATT
GGTCTGGGTTTGCAAAAATGCATTTCGTCTCGTTGCAGCCCTTAATTCTG
CCCTTTTGTCTCCGTGACTCATCACTGACTTGTTCCCACCGCCAAATACT
GACCGGAACTAAGTGACAGTCGCCGAATCCTCCGTCACAAAATAACAGGT
CGGCAAGGAGCTGACGGACGGAAGCGGGTTGGCGTTGCCCTGGTATGGGT
TCGCCGCGGCAGCCGCTGGCGTGCTCTTCATCCTCAAGACGGTGGGCACG
ATTGCGACGAACGCCATAGAGGAGATGGAGGAAGAGTCGGACCCGTGAGA
GACATTTGTTCTGGGTGCGTGACGGGCGCTTGTCTCAAGCAGCTCAGAAA
GGCGGTCCATAGTGAACCGCGTGCACGTGTTCGCGCTTCATTGCTCGCTC
GCTCGCTCGCGTTGGAAGGACGGCACGAGGTAGCAGATTAGGAGGTTTCG
GGTGACGGACAGGGCAGAAGCAGCAGAGACAGCTCAGATCTGAGCGCATT
CGATCTTCTGCATGACCCGGATGTTCTAGAACGCCTGTTCGAAAAAAGGG
CGAGGGGGGGTCGGGGAGGCTAAGGGGGAGAGGGAGAGGGAGAGGATTAC
GAATCTGCAGTGTTGACTCTTGTGCATGATCCAGATTGCCTAGGACGCCT
GTTAAGCTTTAGGGCGAGGGCAGGTGGGGGGCAGTGAAAACGCATCAGCA
GGATATGGCTCAGTTCTGCCAGTGTGTATTTGGTCGATTCTCTCCACGAG
TGTGAAAGGTCTCCATCTCCACAAGGTGGGTGGCACAGGTGTCCGTTTTG
TTTGCGGGAGCCGTGTGTGCGGGACAGGGGAGGGATGTATGTGTGCGTTC
TCTTTTTTTCTTAAATATCCTGATGTCATTACGTCGACATAGCTGGATCC
CTCTCTGCCTGGGCCGTGGTGCGTGTTTTGCTCGACAAAATTTCAGTAAC
GTGCTATGCGTGCATCTCTGGCTTTCGGGGCTGGTAAACTCTCACAATGA
TACTCAATAAAAGCGAAGCAAGTCAGCAGCTCGACGCCCCACCGAAGTAG
TTCGAAGCTTGAGGCGCAGGCGGCCTTCCTTGTCTTTTGCTGGTTGCGCG
TGATTTCGAGATGTTTACCAGCAAAGCGAAATAACCGCCAGTATGGCTTG
AAAATACTGGAAGCTTGCCTTATTATTATTTTCTAACGGCCTACTCCAGT
ATGTATTAGACAAAGTCTTTTGTCATATGCCGGGCGTCGTTTCCTACCGT
TCGGATCCCTGGATGACATCGGCGGAGGTCACCAACGCGAGGTTTTCGCA
AGGTGTCGAGTCTTTCATGCGATGTGCGTGTCTGAGTGTGTTGAGCTTGT
AAACCACATCTCTATGTTGTTCCGCAGAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig75:575550..579778+

>mRNA_P-fluviatile_contig75.14054.1 ID=mRNA_P-fluviatile_contig75.14054.1|Name=mRNA_P-fluviatile_contig75.14054.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1668bp|location=Sequence derived from alignment at P-fluviatile_contig75:575550..579778+ (Porterinema fluviatile SAG_2381)
ATGCATTCCTACGGCTGCTCCCTCATTTCCTCATTTCCTTGTTCCGACCG
ACCTGTTGTAACTTCATCGCGCCGTCGTCCCATCACACCCAGCCTTCACA
CTCACACCGGTGCCGCCGGCATCGGGGGCCTCGGCTCGGGCACTGGCCCC
GTCTCCACCTACTCGGCCTCCCTCGAGACCGTCGTGGAGACGGCCAAAAG
GGGGCCCGCCGCGGCCACCTCGGCGCTCCAGGGCTACCTCTCGAGCAGCA
TCACCAAGATCGACGAACTGGGCCCCCTGGGGGCGGTGTACTTCGGCCTG
CTGTACGTGCTGGCGGAGGTGCTCATCATCCCCGCCCTGCCGCTCACCAC
GGCGGCGGGCTTCCTGTTTGGCGTGGCCGGGGGCACCGCAGTCGTCCTGA
CCAGCGCCTGCGTCGCCGCGGCGATTTCGTTCCAGCTTGGCCGCACGCTG
TTGAGATGCATTCCTACGGCTGCTCCCTCATTTCCTCATTTCCTTGTTCC
GACCGACCTGTTGTAACTTCATCGCGCCGTCGTCCCATCACACCCAGCCT
TCACACTCACACCGGTGCCGCCGGCATCGGGGGCCTCGGCTCGGGCACTG
GCCCCGTCTCCACCTACTCGGCCTCCCTCGAGACCGTCGTGGAGACGGCC
AAAAGGGGGCCCGCCGCGGCCACCTCGGCGCTCCAGGGCTACCTCTCGAG
CAGCATCACCAAGATCGACGAACTGGGCCCCCTGGGGGCGGTGTACTTCG
GCCTGCTGTACGTGCTGGCGGAGGTGCTCATCATCCCCGCCCTGCCGCTC
ACCACGGCGGCGGGCTTCCTGTTTGGCGTGGCCGGGGGCACCGCAGTCGT
CCTGACCAGCGCCTGCGTCGCCGCGGCGATTTCGTTCCAGCTTGGCCGCA
CGCTGTTGAGGTCTCAGGTGGAAGACCTCCTCGACGAGAACCCCAAGTTC
CGCGCGCTTGACAAGGCCATCGCGAAGGAGGGTTTCAAGGTGATCCTGCT
CTTGAGACTAAGCCCCATCTTCCCGTTCGCCCTGAGCAATTACCTCTACG
GGGTGACGTCGGTCGACTTCGTGGAGTACATTTCGGGTACCCTCATCGGC
TTCCTGCCCGGGACGGTGGCCTACGTGTACGGGGGCACGGTCTCAGGTGG
AAGACCTCCTCGACGAGAACCCCAAGTTCCGCGCGCTTGACAAGGCCATC
GCGAAGGAGGGTTTCAAGGTGATCCTGCTCTTGAGACTAAGCCCCATCTT
CCCGTTCGCCCTGAGCAATTACCTCTACGGGGTGACGTCGGTCGACTTCG
TGGAGTACATTTCGGGTACCCTCATCGGCTTCCTGCCCGGGACGGTGGCC
TACGTGTACGGGGGCACGGTCGGCAAGGAGCTGACGGACGGAAGCGGGTT
GGCGTTGCCCTGGTATGGGTTCGCCGCGGCAGCCGCTGGCGTGCTCTTCA
TCCTCAAGACGGTGGGCACGATTGCGACGAACGCCATAGAGGAGATGGAG
GAAGAGTCGGACCCGTGAGTCGGCAAGGAGCTGACGGACGGAAGCGGGTT
GGCGTTGCCCTGGTATGGGTTCGCCGCGGCAGCCGCTGGCGTGCTCTTCA
TCCTCAAGACGGTGGGCACGATTGCGACGAACGCCATAGAGGAGATGGAG
GAAGAGTCGGACCCGTGA
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