mRNA_P-fluviatile_contig75.14030.1 (mRNA) Porterinema fluviatile SAG_2381
|
Overview
Homology
BLAST of mRNA_P-fluviatile_contig75.14030.1 vs. uniprot
Match: D8LK26_ECTSI (Ankyrin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK26_ECTSI) HSP 1 Score: 414 bits (1063), Expect = 2.190e-137 Identity = 332/424 (78.30%), Postives = 354/424 (83.49%), Query Frame = 3
Query: 324 ISIADAAPVLSSTPRGSQLGSAFQDGDGVFDANYSKSKGXXXXXXXXXXXXXXXXXXXXXSRPKPRPGGVHAHVAAYEGDLAKLRRYCEAGGDLEKRDSYRATPLLLAAEKGHEACVAYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDIPTIKNYIAGKGDLNTKGKNQMTPLHVACFNGRTEIVGLLLEAGADPNATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEDKDTEIRSLKRXXXXXXXXXXXXXXKMAAIEGIINQAAEASQGGRRAVEQVLKDLITKNTSKDGTCKVS 1595
+S+ADAAP+LS+TPR QLGSAFQDGDG FD + ++ R KPRPGGVHAHVAAYEGDL KLRRY EAGGDLEKRDSYRATPLLLAAEKGHEACVAYL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERND+ +K++I+GKGDLN KGKN MTPLHVA FNGRT+IV +LL+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEDKD+EIR+LKRXXXXXXXXXXXXXXKM AIE I+NQAAEASQGG+RAVEQVLK LI KNTS++GTC+VS
Sbjct: 1 MSMADAAPMLSATPRSGQLGSAFQDGDGGFDTTGAGARAAGGSGSSSSRKPGSSRT----GRSKPRPGGVHAHVAAYEGDLGKLRRYSEAGGDLEKRDSYRATPLLLAAEKGHEACVAYLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKLGVDVIEAVERNDVAGLKSFISGKGDLNQKGKNDMTPLHVASFNGRTDIVRMLLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLGRTPAERSTGTSVQQLLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEDKDSEIRALKRXXXXXXXXXXXXXXKMTAIEEIMNQAAEASQGGKRAVEQVLKGLIDKNTSREGTCRVS 420
BLAST of mRNA_P-fluviatile_contig75.14030.1 vs. uniprot
Match: D8LK98_ECTSI (Similar to ankyrin 2,3/unc44 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK98_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 2.470e-15 Identity = 144/316 (45.57%), Postives = 184/316 (58.23%), Query Frame = 3
Query: 531 VHAHVAAYEGDLAKLRRYCEAGGDLEKRDSYRATPLLLAAEKGHEACVAYLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRGRIPKRLASRKEISNLLAAKETESKLG--VDVIEAVERNDIPTIKNYIAGKGD-------------------LNTKGKNQMTPLHVACFNGRTEIVGLLLEAGADPNATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---LLEAESYKSIPKNIAQIRKQTEALQLRVDTNESIFVQKAIAIKGLRIAIEDKDTEI 1406
+H H AAY G L+ Y GGDLE RD ++AT L+L AE+GH V LXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX LA+ I +L ++ G D++ AVE ND + N+IA + LN G+ M+ +H+A F+G + + LLLEAG+DPNA XXXXXXXXXXXXXXXXXXXXXX LLEA+++++ P N+ +R + L++D E +FV+K +AIK LR A++ KD ++
Sbjct: 817 IHVHTAAYNGKQDVLKAYISQGGDLEIRDQFQATALMLCAERGHTQMVDDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLATDPAIRRILRIEQMVRFSGENFDLLGAVEVNDTMAVANFIAMGQEACGYPHNPNAVAVASKRLRLNRTGRGGMSAVHLAAFHGYADSLRLLLEAGSDPNAVSDDGETPLHTACNGGSILXXXXXXXXXXXXXXXXXXXXXXCEKHIAGGRQEMKHLLEAKAFQATPANLLALRADLAEVALQIDAEEDLFVRKGVAIKYLRKALKKKDVDL 1132 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig75.14030.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig75.14030.1 >prot_P-fluviatile_contig75.14030.1 ID=prot_P-fluviatile_contig75.14030.1|Name=mRNA_P-fluviatile_contig75.14030.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=437bp MNGKGRRDIVRSISIADAAPVLSSTPRGSQLGSAFQDGDGVFDANYSKSKback to top mRNA from alignment at P-fluviatile_contig75:299583..312297+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig75.14030.1 ID=mRNA_P-fluviatile_contig75.14030.1|Name=mRNA_P-fluviatile_contig75.14030.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12715bp|location=Sequence derived from alignment at P-fluviatile_contig75:299583..312297+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig75:299583..312297+ >mRNA_P-fluviatile_contig75.14030.1 ID=mRNA_P-fluviatile_contig75.14030.1|Name=mRNA_P-fluviatile_contig75.14030.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2622bp|location=Sequence derived from alignment at P-fluviatile_contig75:299583..312297+ (Porterinema fluviatile SAG_2381)back to top |