mRNA_P-fluviatile_contig75.14001.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig75.14001.1
Unique NamemRNA_P-fluviatile_contig75.14001.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig75.14001.1 vs. uniprot
Match: A0A6H5JH19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH19_9PHAE)

HSP 1 Score: 738 bits (1906), Expect = 4.520e-257
Identity = 431/675 (63.85%), Postives = 485/675 (71.85%), Query Frame = 1 
Query:   82 MEYERALFRVYDKSMEGFHSPAVRNACNVLKKCFLVISAGLFATLVLLHRQFVNNPGCLAPLLEAAALREGLLIPPDSSSPSPSSAKAFVGTVTANNTLGEIDIGAGGVIVDPNGPPPRREGANG---------GGREXXDERGEEKSGSGEDEDHPTRIQLPSGSWLPYDIMIGVSIGGXXXXXXXXXXXXXXXGLRGASNNGEEDQGQGKVGRDGRRTADGEG-----------------------------------------------------GGVGAEAEVSKEDTGKGGDESSN-----AGYPADTEGDSSGATNNTGFYADYTFAFEPIVMLLPEKIQESHQFTWLNFTIEPSVCLGDAGFVSRLLAATVVGYDEIMVNMFMFSMRSKGLLKNTKTGGDWMWPMDAEPTTGFLHFFTTVAFKCEVLLRSVMAFVLMSTVTAMTVRTLLSSGVVIMFPMIMLMERMGLQGVDMNQMLALSYPWLGMPIEHLRNQNKPIGPFILGHLMQMVIFYTVYNACLLAWSYWLYGKTMATSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFGLAAWCSFFGMFAVKLYVLQAIELPAYTSGEISHDNPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGDDVPDRPDG 1905
            MEYERALFRVYDKSMEGFHS  VR+ACN+L+K FLV SAGLFA LVLLH QFVN PGCLAPLLE AA REG+LI P             V ++TAN TLGEID    GVIV   G P +  G            GG  XX             + HP++IQLPSG+W+PYD+M+GVSIG   XXXXXXXXXXXXX                      RRTAD EG                                                     GG   EA V   +  +GG ++S+      G      G +  A N+T F ADYTFAFEPIV+LLP+KIQE H F W+NFT+EPSVCL +AGFVSRLLAATV+GYDEIMVNMFM+SMRSKGLLKNTKTGG+WMW  D++P++G +   + VAFK +V++RS+MAF+LMSTVTA+TVRTLLSSGVVI+FP++ML+ERMGLQGVDM QMLALSYPWLG+PIEHLRN+NKP+GPFI+GH+MQMV+FYTVYNACLLAWSYWLYGKTM TSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSF+AFHVYFYHFQMGFFGLAAW SF GMF+VKLYVLQAIELPAYTSGE+S D PRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGD VPDRPDG
Sbjct:    1 MEYERALFRVYDKSMEGFHSREVRSACNLLQKLFLVASAGLFAALVLLHHQFVNKPGCLAPLLEEAASREGVLILPT------------VRSITANTTLGEIDTDPEGVIV---GGPNQAGGXXXXXXXXXXXXGGXXXXXXXXXXXXXXXXXDRHPSKIQLPSGNWMPYDVMVGVSIGNGGXXXXXXXXXXXXXXXXXXXXXXXXXX------XXSRRTADAEGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRGGGQDEAAVEGAEGSEGGGQASSNDTAVIGAGGGEIGMNVSAVNDTEFTADYTFAFEPIVLLLPDKIQEGHGFKWVNFTMEPSVCLREAGFVSRLLAATVIGYDEIMVNMFMYSMRSKGLLKNTKTGGEWMWSRDSDPSSGLMRVLSAVAFKSQVVVRSLMAFLLMSTVTALTVRTLLSSGVVIIFPVVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHVMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFSVKLYVLQAIELPAYTSGEVSQDAPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGDAVPDRPDG 654
[Close]
BLAST of mRNA_P-fluviatile_contig75.14001.1 vs. uniprot
Match: D8LRD0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRD0_ECTSI)

HSP 1 Score: 333 bits (853), Expect = 6.400e-104
Identity = 183/280 (65.36%), Postives = 207/280 (73.93%), Query Frame = 1 
Query: 1087 KTGGDWMWPMDAEPTTGFLHFFTTVAFKCEVLLRSVMAFVLMSTVTAMTVRTLLSSGVVIMFPMIMLMERMGLQGVDMNQMLALSYPWLGMPIEHLRNQNKPIGPFILGHLMQMVIFYTVYNACLLAWSYWLYGKTMATSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYH-------FQMGFFGLAAWCSFFGMFAVKLYVLQAIELPAYTSGEISHDNPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGDDVPDRPDG 1905
            KTGG+WMW  D +P++G +   + VAFK +VL+RS++AFVLMSTVTA+TVRTLLSSGVVIMFPM+ML+ERMGLQGVDM QMLALSYPWLG+PIEHLRN+NKP+GPFI+GH+MQMV+FYTVYNACLLAWSYWLYGKTM TSLQ    G       F       RSS      T++ S        +        FQ GF G        G F       +AIELPAYTSGE+S D PRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGD VPDRPDG
Sbjct:   18 KTGGEWMWSRDPDPSSGLMRVLSAVAFKSQVLVRSLVAFVLMSTVTALTVRTLLSSGVVIMFPMVMLLERMGLQGVDMQQMLALSYPWLGLPIEHLRNRNKPVGPFIMGHIMQMVVFYTVYNACLLAWSYWLYGKTMTTSLQGGSTGWGSSTNTF-------RSSFWGGGPTSSSSPGRPRCPSWRSPCTSTTFQRGFSGWGRGPPSPGWFPFSSTWWKAIELPAYTSGEVSQDAPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGDAVPDRPDG 290
[Close]
BLAST of mRNA_P-fluviatile_contig75.14001.1 vs. uniprot
Match: A0A7S4DCY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCY7_HETAK)

HSP 1 Score: 272 bits (695), Expect = 2.270e-79
Identity = 150/344 (43.60%), Postives = 210/344 (61.05%), Query Frame = 1 
Query:  850 TGFYADYTFAFEPIVMLLPEKIQESHQFTWLNFTIEPSVCLGDAGFVSRLLAATVVGYDEIMVNMFMFSMRSKGLLKNTKTGGDWMWPMDAEPTTGFLHFFTTVAFKCEVLLRSVMAFVLMSTVTAMTVRTLLSSGVVIMFPMIMLMERMGLQGVDMNQMLALSYPWLGMPIEHLRNQNKPIGPFILGHLMQMVIFYTVYNACLLAWSYWLYGKTMATSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFGLAAWCSFFGMFAVKLYVLQAIELPAYTSGEISHDNPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGD 1881
            T F A Y F+    +ML+   ++       LN T+E + C G   F   L+ AT  G+D  ++NM MFS+ S GLLKN  T  +W W     P  G       +A K   LL S++AF LMS+VTA+ VR L+SSGVV MFP+   +ER GL+G +  ++L LSYPWLG P+E L+ + KP GPF+ GHL+++V++Y +Y A  +AW+ WLYGK+    L+VWL+G +ML+EY+ ++F+R+R   +FF R   L F+ +H+YFY F  G+F L A   F  M    L+ LQ +E PA   GE+S   PRA + ELPWP   + L P W+LF+PP  +  GVY D
Sbjct:  146 TEFDAKYEFSVSFPLMLMDGDLRSKLGVRELNITLEHT-CFGATPFDRFLVLAT--GHDTPVINMLMFSLHSDGLLKNMFTKEEWSWGKGELPPAGGYSPLLRLALKPLALLSSLLAFFLMSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFN-QRLLRLSYPWLGAPMEELQRRGKPTGPFVAGHLLKVVVYYALYEAAQVAWAQWLYGKSTPAGLEVWLFGSMMLWEYYGMLFLRSRGGSLFFPRLCGLYFVGYHLYFYSFNYGYFDLLALAHFCLMLHAMLFTLQHLEAPALLRGEVSPAAPRAVYTELPWPAHPSELAPEWTLFVPPAEAVRGVYDD 485
[Close]
BLAST of mRNA_P-fluviatile_contig75.14001.1 vs. uniprot
Match: D8LRC9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRC9_ECTSI)

HSP 1 Score: 263 bits (672), Expect = 3.610e-79
Identity = 167/332 (50.30%), Postives = 192/332 (57.83%), Query Frame = 1 
Query:   82 MEYERALFRVYDKSMEGFHSPAVRNACNVLKKCFLVISAGLFATLVLLHRQFVNNPGCLAPLLEAAALREGLLIPPDSSSPSPSSAKAFVGTVTANNTLGEIDIGAGGVIVDPNGPPPRREGANGGGREXXDERGEEKSGSGEDEDHPTRIQLPSGSWLPYDIMIGVSIGGXXXXXXXXXXXXXXXGLRGASNNGEEDQGQGKVGRDGRRTADGEGGGVGAEAEVSKEDTGKGGDESSNAGYPADTEGDSSGATNNTGFYADYTFAFEPIVMLLPEKIQESHQFTWLNFTIEPSVCLGDAGFVSRLLAATVVGYDEIMVNMFMFSMRSKGLL 1077
            MEYERALFRVYDKSMEGFHS  VR+ACN+L+K  LV SAGLFA L LLH QFVN PGCLAPLLE AA REG+LI P             V +VTAN TLGEID    GVIV   G P +      G   XX               HP++IQLPSG+W+PYD+M   + G                       + E  +G G+   +     DG  G +G                                A N+TGF ADYTFAFEPIV+LLP+KIQE H F W+NFT+EPSVCL +AGFVSRLLAATV+GYDEIMVNMFM+SMRSKGLL
Sbjct:    1 MEYERALFRVYDKSMEGFHSRGVRSACNLLQKLVLVASAGLFAALFLLHHQFVNKPGCLAPLLEEAASREGVLILPT------------VRSVTANTTLGEIDTDPEGVIV---GGPNQA-----GXXXXXXXXXXXXXXXXXXXRHPSKIQLPSGNWVPYDVMDEAAAG-----------------------SAEGGEGGGEASSNDTAVVDGXXGEIGVNVS----------------------------AVNDTGFTADYTFAFEPIVLLLPDKIQEGHGFKWVNFTMEPSVCLREAGFVSRLLAATVIGYDEIMVNMFMYSMRSKGLL 261
[Close]
BLAST of mRNA_P-fluviatile_contig75.14001.1 vs. uniprot
Match: A0A835YR56_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR56_9STRA)

HSP 1 Score: 239 bits (609), Expect = 7.560e-70
Identity = 122/240 (50.83%), Postives = 172/240 (71.67%), Query Frame = 1 
Query: 1180 LLRSVMAFVLMSTVTAMTVRTLLSSGVVIMFPMIMLMERMGLQGVDMNQMLALSYPWLGMPIEHLRNQNKPIGPFILGHLMQMVIFYTVYNACLLAWSYWLYGKTMATSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFGLAAWCSFFGMFAVKLYVLQAIELPAYTSGEISHDNPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGDDVPDRP 1899
            L R+++ F ++S+VTA+ VR LLSSGV  MFP   L+ RMG   +D +++LA SYPW+G P++ LR QNKP GPFI+ HL+Q+V++YT+YNA  +AW+ WLY K+    L++ L+GM++L+EY+ L+FVR+ + I FF R   L F A+H+YF+   MG+FGLAA  +F  +    LY +  +E+PA T GEIS ++PRA FVELPWP+WGA+LPP W+LF+P N    GVY +  P RP
Sbjct:   13 LARALLTFAVLSSVTALVVRMLLSSGVAAMFPFFALLRRMGFTDLD-DRVLAASYPWIGRPMQALRRQNKPTGPFIMAHLVQVVVYYTLYNAVQVAWTMWLYDKS--AQLEMSLFGMMLLWEYYCLVFVRSAAGIAFFPRVTMLYFTAYHMYFFMNPMGYFGLAALSTFLLVLHAMLYTVTDLEVPALTRGEISAEHPRACFVELPWPSWGASLPPTWTLFLPTNTRVRGVYENIRPSRP 249
[Close]
BLAST of mRNA_P-fluviatile_contig75.14001.1 vs. uniprot
Match: A0A7S3Y6C3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C3_HETAK)

HSP 1 Score: 231 bits (590), Expect = 1.860e-66
Identity = 120/264 (45.45%), Postives = 168/264 (63.64%), Query Frame = 1 
Query: 1090 TGGDWMWPMDAEPTTGFLHFFTTVAFKCEVLLRSVMAFVLMSTVTAMTVRTLLSSGVVIMFPMIMLMERMGLQGVDMNQMLALSYPWLGMPIEHLRNQNKPIGPFILGHLMQMVIFYTVYNACLLAWSYWLYGKTMATSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFGLAAWCSFFGMFAVKLYVLQAIELPAYTSGEISHDNPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGD 1881
            T  +W W     P  G       +A K   LL S++AF LMS+VTA+ VR L+SSGVV MFP+   +ER GL+G +  ++L LSYPWLG P+E L+ + KP GPF+ GHL+++V++Y +Y A  +AW+ WLYGK+    L+VWL+G +ML+EY+ ++F+R+R   +FF R   L F+ +H+YFY F  G+F L A   F  M    L+ LQ +E PA   GE+S   PRA + ELPWP   + L P W+LF+PP  +  GVY D
Sbjct:   35 TKEEWSWGKGELPPAGGYSPLLRLALKPLALLSSLLAFFLMSSVTALIVRVLISSGVVFMFPLFSALERAGLRGFN-QRLLRLSYPWLGAPMEELQRRGKPTGPFVAGHLLKVVVYYALYEAAQVAWAQWLYGKSTPAGLEVWLFGSMMLWEYYGMLFLRSRGGSLFFPRLCGLYFVGYHLYFYSFNYGYFDLLALAHFCLMLHAMLFTLQHLEAPALLRGEVSPAAPRAVYTELPWPAHPSELAPEWTLFVPPAEAVRGVYDD 297
[Close]
BLAST of mRNA_P-fluviatile_contig75.14001.1 vs. uniprot
Match: A0A7S2AJJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJJ9_9STRA)

HSP 1 Score: 229 bits (583), Expect = 2.430e-65
Identity = 118/293 (40.27%), Postives = 182/293 (62.12%), Query Frame = 1 
Query: 1018 GYDEIMVNMFMFSMRSKGLLKNTKTGGDWMWP-----MDAEPTTGFLHFFTTVAFKCEVLLRSVMAFVLMSTVTAMTVRTLLSSGVVIMFPMIMLMERMGLQGVDMNQMLALSYPWLGMPIEHLRNQNKPIGPFILGHLMQMVIFYTVYNACLLAWSYWLYGKTMATSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFGLAAWCSFFGMFAVKLYVLQAIELPAYTSGEISHDNPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGD 1881
            G+D I++   M S+   G++    T   W W      +  +   G L +      K  V+LRS++AF   STVTA+ VR L+SSGVVIMFP++  +  +G   +DM Q+L +SYPWLG+P+E LR QNKP+ P I+ H++++V+ Y++Y AC LAW  WLY K + + L++W+YG+VM++EY+++I++R+ ++I F  R   + F+AFH Y Y    GF+ +A    F  M    ++ L  +E+PA +  E+S D PRA +  LPW  W A LPP W+LF+P N+ +  +Y D
Sbjct:    2 GWDTIIITQIMTSVADSGMVARLATKEAWSWTESTLALGYQNKRGVLEYLKA---KAIVVLRSLLAFFFTSTVTALIVRMLISSGVVIMFPLLTGLRYLGCSAIDM-QILNMSYPWLGLPVERLRAQNKPVTPLIVAHMVRVVVLYSMYEACQLAWGIWLYDKPLPSGLELWIYGIVMIWEYYSMIYLRSAAAIYFLPRFTLVYFIAFHFYLYGTAYGFYPVALLTMFLAMCHSLVFCLTRLEVPASSRLEVSFDQPRALYTALPWTAWSAMLPPSWTLFLPLNSRAQNIYDD 290
[Close]
BLAST of mRNA_P-fluviatile_contig75.14001.1 vs. uniprot
Match: A0A4D9D9V5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9V5_9STRA)

HSP 1 Score: 211 bits (538), Expect = 8.240e-56
Identity = 131/388 (33.76%), Postives = 213/388 (54.90%), Query Frame = 1 
Query:  781 GDESSNAGYPADTEGDSSGATNNTG---FYADYTFAFEPIVMLLPEKIQESHQFTWLNFTIEPSVCLGDAGFVSRLLAATVVGYDEIMVNMFMFSMRSKGLLKNTKTGGDWMWPMDAEPTTGFLHFFT--TVAFKCEVLLRSVMAFVLMSTVTAMTVRTLLSSGVVIMFPMIMLMERMGLQGVDMNQMLALSYPWLGMPIEHLRNQNKPIGPFILGHLMQMVIFYTVYNACLLAWSYWLYGKTMATSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFGLAAWCSFFGMFAVKLYVLQAIELPAYTSGEISHDNPRAHFVELPWPTWGAALPPMWSLFIP----------PNASSVGVYGDDVPDRP 1899
            G E   AG    TE  +   +N+T    F  DY +A    ++ L       H+   +N +++  +C+     +  ++ A V  +D ++VN  MF+ RS G+L+ T+T   W W  ++ P  G   FF+    + K   LL+S+ AF  +S  TA+ VR L++SGV +M+P    + R+G +G+ +  +LA SY WLG+P++ L+ + KP+ PF+L HL ++++ Y++Y AC + +   LY K+ A+ L   +YG+VML EY ++++VR+  SI +F R   L  LAFH+Y+Y    GF  L        +    +YVL  +ELPA+ +  +S+D PRA + +   P    ++PP WSLF+P                GVY ++VPDRP
Sbjct:   95 GAERGEAGTSETTEIINDADSNDTALSSFNPDYVYAQNTALLYLDPAFLSRHRVRRVNVSLD-EMCMTKGPALGFVVDAAVGDFDTLLVNQLMFTFRSDGMLRKTRTNETWSWRAESLPPPGGRPFFSLDNWSLKLSALLQSLSAFFFLSGTTAIVVRMLMTSGVALMYPCFFCLRRLGARGLSLG-VLARSYAWLGVPMQRLQARGKPLAPFLLAHLCKVLVLYSMYEACQVFFVETLYAKSGASGLPFAVYGLVMLLEYVSMLYVRSALSIKYFPRVVFLYLLAFHLYYYLVPFGFSSLLLLAISLLLLHSVIYVLLFLELPAFRASIVSYDTPRAFYTDTGLPAHPNSIPPSWSLFLPLTLGRRGDDGGRGGVGGVYEEEVPDRP 480
[Close]
BLAST of mRNA_P-fluviatile_contig75.14001.1 vs. uniprot
Match: A0A7S0XCD7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCD7_9STRA)

HSP 1 Score: 207 bits (526), Expect = 2.950e-55
Identity = 115/346 (33.24%), Postives = 197/346 (56.94%), Query Frame = 1 
Query:  841 TNNTGFYADYTFAFEPIVMLLPEKIQESHQFTWLNFTIEPSVCLGDAGFVSRLLAATVVGYDEIMVNMFMFSMRSKGLLKNTKTGGDWMWPMDAEPTTGFLHFFTTVAFKCEVLLRSVMAFVLMSTVTAMTVRTLLSSGVVIMFPMIMLMERMGLQGVDMNQMLALSYPWLGMPIEHLRNQNKPIGPFILGHLMQMVIFYTVYNACLLAWSYWLYGKTMATSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFGLAAWCSFFGMFAVKLYVLQAIELPAYTSGEISHDNPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYG 1878
            +N+      Y FA+   V+ L E+I+++H F   N T+  S C GD   +S +    + G D I+ N    +  +   +  T  G    W  +   T    +    + F+  VL  S  +F ++ST++A+ VR L+SSGVV++FP+  +++R    G+    +++LSYPW+G+PIE LR++N+ I PFI+ H+ ++V++Y +Y A  LA+S W Y  +     ++W++ ++ML EY+++I++R+R SI+ F R    +++ +H+Y Y    GF  LA    F  M    ++ ++  ELPAY+SG +S D PR     +PWP W  A+ P ++LF P +  S+ +YG
Sbjct:   35 SNHPAHGHSYEFAYSITVLSLNEEIRKTHDFEVFNITLSGSECFGDIITMSLI---PLGGIDTIIRNFIQSTYSNHDGVIITSAGDYMTWNKNDNKTINSKYISKYITFRLMVLFVSFFSFFMLSTISALLVRILISSGVVLLFPLFWIVQRFTSHGISWR-IISLSYPWIGIPIEVLRSRNQSIEPFIIAHICRIVVYYVLYEAAQLAFSVWFYNDSRPGQKELWIFAIMMLLEYYSMIYLRSRGSIILFPRVILSTYMIYHIYVYLHPNGFHLLALLVMFMFMAWNMIFCVRKFELPAYSSGHVSIDAPRVLHNRVPWPMWSIAIAPDFTLFWPLDHQSMTIYG 376
[Close]
BLAST of mRNA_P-fluviatile_contig75.14001.1 vs. uniprot
Match: A0A7S2SN08_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SN08_9STRA)

HSP 1 Score: 205 bits (522), Expect = 5.300e-54
Identity = 118/362 (32.60%), Postives = 189/362 (52.21%), Query Frame = 1 
Query:  814 DTEGDSSGATNNTGFYADYTFAFEPIVMLLPEKIQESHQFTWLNFTIEPSVCLGDAGFVSRL---LAATVVGYDEIMVNMFMFSMRSKGLLKNTKTGGDWMWPMDAEPTTGFLHF--FTTVAFKCEVLLRSVMAFVLMSTVTAMTVRTLLSSGVVIMFPMIMLMERMGLQGVDMNQMLALSYPWLGMPIEHLRNQNKPIGPFILGHLMQMVIFYTVYNACLLAWSYWLYGKTMATSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQMGFFGLAAWCSFFGMFAVKLYVLQAIELPAYTSGEISHDNPRAHFVELPWPTWGAALPPMWSLFIPPNASSVGVYGDD 1884
            D +G   G+ +   F  DY F+    V  +   + + +  +  N ++        + ++      L     G D I+VN  M++ +  G LKN  T   W W    +    +L++  F     K      S+++F L+S +TA+ VR L++SGV I FP+  L +R+GL      Q+L+LSYPWLG  IE L   N+   P +  HL  ++++YT+Y AC + WS+WLY K+M       ++G+VM+ EYF++IF R+  +I FF R     ++AFH+YFY    GF  +A    +       +Y L+  E+ A+  G +S + PR+ + E+P P W   LPP+WS+F P N S   +Y D+
Sbjct:  134 DHDGRVVGSASEKNFAVDYEFSCSSSVARMNSSLYKVYGISTYNVSLHADCLAPSSPYIRSFWVNLIRVAFGVDAIVVNQAMYAFQCDGYLKNLATKEIWSWD---KRDFDYLNYGLFRKAVRKLAAFFMSILSFALVSQITALLVRVLVTSGVAITFPLFNLFQRLGLNQ-HRRQLLSLSYPWLGAQIELLHTSNQSSNPLVSAHLFNVLLYYTMYEACQIVWSFWLYNKSMPAGQMQQIFGLVMICEYFSMIFARSLLTIQFFPRVMMFYYIAFHLYFYLVPYGFTSMATITWYAACLHAMVYCLRYHEVKAFQRGRVSFEQPRSLYSEIPQPQWNMLLPPLWSMFYPLNRSQRSIYDDE 491
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig75.14001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JH19_9PHAE4.520e-25763.85Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LRD0_ECTSI6.400e-10465.36Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S4DCY7_HETAK2.270e-7943.60Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
D8LRC9_ECTSI3.610e-7950.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YR56_9STRA7.560e-7050.83Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A7S3Y6C3_HETAK1.860e-6645.45Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2AJJ9_9STRA2.430e-6540.27Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
A0A4D9D9V5_9STRA8.240e-5633.76Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S0XCD7_9STRA2.950e-5533.24Hypothetical protein (Fragment) n=2 Tax=Chromulina... [more]
A0A7S2SN08_9STRA5.300e-5432.60Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig75contigP-fluviatile_contig75:23925..30725 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score201.4
Seed ortholog evalue1.4e-48
Seed eggNOG ortholog35128.Thaps20868
Preferred nameTMEM259
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0006950,GO:0008150,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010604,GO:0010941,GO:0012505,GO:0019222,GO:0030162,GO:0031323,GO:0031325,GO:0031329,GO:0031331,GO:0032268,GO:0032270,GO:0033554,GO:0034976,GO:0042176,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0045732,GO:0045862,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051173,GO:0051246,GO:0051247,GO:0051716,GO:0060255,GO:0060548,GO:0061136,GO:0065007,GO:0080090,GO:0080134,GO:0080135,GO:1901214,GO:1901215,GO:1901800,GO:1903050,GO:1903052,GO:1903362,GO:1903364,GO:1904292,GO:1904294,GO:1905897,GO:1905898
EggNOG free text desc.positive regulation of ERAD pathway
EggNOG OGs2XG4I@2836,KOG2092@1,KOG2092@2759
COG Functional cat.S
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-06_003000.1
Exons9
Model size2191
Cds size2190
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817183.4676654-CDS-P-fluviatile_contig75:23924..241741622817183.4676654-CDS-P-fluviatile_contig75:23924..24174Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 23925..24174 +
1693571417.5548337-CDS-P-fluviatile_contig75:23924..241741693571417.5548337-CDS-P-fluviatile_contig75:23924..24174Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 23925..24174 +
1622817183.4782114-CDS-P-fluviatile_contig75:24594..251981622817183.4782114-CDS-P-fluviatile_contig75:24594..25198Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 24595..25198 +
1693571417.5678782-CDS-P-fluviatile_contig75:24594..251981693571417.5678782-CDS-P-fluviatile_contig75:24594..25198Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 24595..25198 +
1622817183.4881656-CDS-P-fluviatile_contig75:26430..265151622817183.4881656-CDS-P-fluviatile_contig75:26430..26515Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 26431..26515 +
1693571417.5782168-CDS-P-fluviatile_contig75:26430..265151693571417.5782168-CDS-P-fluviatile_contig75:26430..26515Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 26431..26515 +
1622817183.4977117-CDS-P-fluviatile_contig75:26897..270471622817183.4977117-CDS-P-fluviatile_contig75:26897..27047Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 26898..27047 +
1693571417.5880845-CDS-P-fluviatile_contig75:26897..270471693571417.5880845-CDS-P-fluviatile_contig75:26897..27047Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 26898..27047 +
1622817183.5066772-CDS-P-fluviatile_contig75:27665..278991622817183.5066772-CDS-P-fluviatile_contig75:27665..27899Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 27666..27899 +
1693571417.606219-CDS-P-fluviatile_contig75:27665..278991693571417.606219-CDS-P-fluviatile_contig75:27665..27899Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 27666..27899 +
1622817183.5163636-CDS-P-fluviatile_contig75:28333..284351622817183.5163636-CDS-P-fluviatile_contig75:28333..28435Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 28334..28435 +
1693571417.98879-CDS-P-fluviatile_contig75:28333..284351693571417.98879-CDS-P-fluviatile_contig75:28333..28435Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 28334..28435 +
1622817183.5291703-CDS-P-fluviatile_contig75:29192..292791622817183.5291703-CDS-P-fluviatile_contig75:29192..29279Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 29193..29279 +
1693571418.005338-CDS-P-fluviatile_contig75:29192..292791693571418.005338-CDS-P-fluviatile_contig75:29192..29279Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 29193..29279 +
1622817183.5482235-CDS-P-fluviatile_contig75:29708..299941622817183.5482235-CDS-P-fluviatile_contig75:29708..29994Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 29709..29994 +
1693571418.0164707-CDS-P-fluviatile_contig75:29708..299941693571418.0164707-CDS-P-fluviatile_contig75:29708..29994Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 29709..29994 +
1622817183.5604796-CDS-P-fluviatile_contig75:30333..307251622817183.5604796-CDS-P-fluviatile_contig75:30333..30725Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 30334..30725 +
1693571418.0274775-CDS-P-fluviatile_contig75:30333..307251693571418.0274775-CDS-P-fluviatile_contig75:30333..30725Porterinema fluviatile SAG_2381CDSP-fluviatile_contig75 30334..30725 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig75.14001.1prot_P-fluviatile_contig75.14001.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig75 23925..30725 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig75.14001.1

>prot_P-fluviatile_contig75.14001.1 ID=prot_P-fluviatile_contig75.14001.1|Name=mRNA_P-fluviatile_contig75.14001.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=730bp
MSPPRFFFLATCCSSSGAKGRGVPRTTMEYERALFRVYDKSMEGFHSPAV
RNACNVLKKCFLVISAGLFATLVLLHRQFVNNPGCLAPLLEAAALREGLL
IPPDSSSPSPSSAKAFVGTVTANNTLGEIDIGAGGVIVDPNGPPPRREGA
NGGGREGGDERGEEKSGSGEDEDHPTRIQLPSGSWLPYDIMIGVSIGGGG
GGSSGGGDRRRWWGLRGASNNGEEDQGQGKVGRDGRRTADGEGGGVGAEA
EVSKEDTGKGGDESSNAGYPADTEGDSSGATNNTGFYADYTFAFEPIVML
LPEKIQESHQFTWLNFTIEPSVCLGDAGFVSRLLAATVVGYDEIMVNMFM
FSMRSKGLLKNTKTGGDWMWPMDAEPTTGFLHFFTTVAFKCEVLLRSVMA
FVLMSTVTAMTVRTLLSSGVVIMFPMIMLMERMGLQGVDMNQMLALSYPW
LGMPIEHLRNQNKPIGPFILGHLMQMVIFYTVYNACLLAWSYWLYGKTMA
TSLQVWLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFLAFHVYFYHFQ
MGFFGLAAWCSFFGMFAVKLYVLQAIELPAYTSGEISHDNPRAHFVELPW
PTWGAALPPMWSLFIPPNASSVGVYGDDVPDRPDGADGSGAAAAAREAAV
AVGGGAATSATVGGGAGAGGRGGGSGGQGEGGERRDPPAAARSGGGAAEG
RGGARARGRERRRARADGSARTEQERPLVG
back to top

mRNA from alignment at P-fluviatile_contig75:23925..30725+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig75.14001.1 ID=mRNA_P-fluviatile_contig75.14001.1|Name=mRNA_P-fluviatile_contig75.14001.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6801bp|location=Sequence derived from alignment at P-fluviatile_contig75:23925..30725+ (Porterinema fluviatile SAG_2381)
ATGTCGCCACCCCGCTTCTTTTTCCTTGCCACGTGCTGCTCCAGTAGCGG
GGCGAAAGGCAGAGGCGTCCCCCGCACAACCATGGAGTATGAGAGGGCAC
TCTTTCGCGTTTACGACAAATCGATGGAAGGCTTCCATTCCCCTGCTGTG
AGGAATGCTTGCAACGTTTTGAAAAAGTGTTTCCTCGTCATCTCTGCCGG
GCTCTTTGCGACGCTTGTTCTCTTGCACCGTCAGTTCGTCAACAACCCAG
GTGCGAGGCGAATAAGGAGCTGTTCGACGTGCTTGTGAATCATATCAGTA
AAGACAGAGAGTGAGGAATGTGGAGCCCAGACGATCGTCCGGAACCCCTG
CTGGGCTCTCTTTCCCACTGCTGTGGTTTTGTTGCGGCTAAACCTTCGCC
GCCGGACGCCGGACGCAGGACGCCAGACCTCGTACTCCACGAAGACCTCG
TCCTCCACGAAGACCGTGGATATGGACCCGCAATCGGCAGTCGAACTACT
GAATTCCCTTTTGCGTGGGTAGATTGGTCTTGGATGGCGTACAAAGATGA
AACGCGGTCGGCAGCAACACCTTCCGGCGTGTACGGCACCCACTGTCCCC
CCCTCCCCGCAAACTCCTCATCCGCTTCTCCGGCAATCTTGATTGCTTTG
TGCGGACCAATCCACTGCAGGTTGTCTGGCGCCCTTGCTGGAGGCAGCAG
CGTTGAGAGAGGGGCTGCTGATACCGCCCGACTCCTCGTCGCCTTCGCCT
TCCTCGGCGAAGGCGTTCGTCGGGACCGTGACAGCGAACAACACGCTGGG
CGAGATAGACATCGGCGCCGGCGGCGTGATAGTGGACCCAAACGGGCCGC
CGCCAAGGCGCGAGGGAGCCAATGGAGGAGGCAGGGAGGGTGGAGACGAG
AGGGGGGAAGAGAAGAGCGGCAGCGGCGAAGACGAGGACCATCCCACGAG
GATCCAGCTCCCTTCCGGAAGCTGGTTACCATACGACATCATGATCGGGG
TCTCGATCGGTGGCGGCGGTGGCGGTAGCTCGGGCGGCGGCGACCGGCGA
CGGTGGTGGGGGCTGCGCGGCGCCTCAAACAACGGGGAAGAAGACCAGGG
GCAAGGCAAGGTGGGAAGGGACGGTAGGAGAACGGCCGATGGCGAAGGGG
GCGGGGTTGGGGCGGAGGCGGAGGTGTCGAAGGAGGACACTGGCAAGGGA
GGCGACGAAAGCAGCAACGCCGGGTATCCGGCCGACACCGAGGGTGACTC
CTCCGGGGCGACCAACAACACTGGGTGAGATGGTGTGGAAGCACACATTG
ATACGGTCCGGGAGGGTGACACGGCATACATGTCGTGTCATGAGTTCCCG
GTGGCGAGGTTAGTGTTGTTGTTGAGTTTTCTTAGGTCGGGGGGAGTATT
CGTTCGCGCCGAACCGCTTATGTGATATGTTTCCCAGCATTTCTCTCCAC
ACTATGTAGATGTCAGTCGTCGACGCAGCGGGTCGCCAAAACACGATCCG
ATGGTCTCGGCCAGAGATGTTGTAAGACCTACTCCGTGAGCGGCAGGCCC
ACTACCAATCGAACTCTCAATATCCCGAGGCATGCCTCGGGCCTGGATGC
CGAGGACGAAGGGCGATCGATGTCCTGAGCACCCACCGTCAGCAGTTTTG
CTCTGATGTGGGAGAAGCGTTTGTGAGCATCTCGGACAAGAGGGGGGGTA
TTGCCAAGGTGGGCCTGGTGACGTGCCCCTGCTGAAGTGAAATGAAAGCC
CGCACCGCCACGCTGGGTGAAATCTCTCGAAGGTATTTTGGTCGAAATGT
GAAGGACACCGCTGGTCAGGAATATAAGAATGCATCTCAGGAAAATACGA
CTCTCGAGGCAGCTTGCCTCGGAAGAGTCAACGGTAAAGGCGCCGTGAGA
GATTGGTATCTTGCTGAGACACGGCCATTTTACCAAGAGCAAGGCGGAGG
GTCTCCTCCTCGCCCCCTGGCCACTCTTGTCTTCTATCTATCTCTCCTCG
ATACATCTTACAACCCTAGCCGCCCTTGGTAGTGAGTGAATACTGCCAAG
ACACCGGATTCGCCTCTGCCAGTAGCCCGTGTCCTCAGTTATCTACTTTA
TTTTTCCACTGGCCCAAGAAATCTAGGGGTGGCGTCTGGGTGCGCTCACG
GTATCCGCTTATATATAGCTCCCACCTTGTTTCGAAATCCGAAGAGAAGG
CTTTCAAAGCCTCCGGCGAGACTCACGCCACAACCTGCCGCATCCAGACG
GAAGCTGCAGCTGCCTGGCGAAGGAACCACCCCCGAAACATTGCCTAGCG
CCAACGGCGTGATGGTTTGACTCTACACGTCTGATGTCCAGTCTGTGGTG
TGTTGCTCCGCTTGAGCTCTTCTCGTAGGGTGTCCAGCACTACACTCGCC
CAGGCCCATGTTTTGTCTCGTGCTGTTTGCTTTCGATGCTCAAAACCGTT
CTCAAGGTTGCTTCTTTCGGGATTGTCGGCGTTTTTCGTACGATTCGTTC
CGGCAGATTCTACGCGGACTACACCTTCGCGTTCGAGCCGATCGTGATGC
TCCTCCCGGAAAAAATCCAAGAGAGCCACCAGTTCACATGGGTGAGAGCA
GAGCAGAGCACCATAAAGCCGACCCCTTCGCTCTGTTCTCTTGGGGTCCC
CCTTCCCCTGCCCACCGCCCGGTGGTTGTACCCCGGGGGTTTCGATTCGG
TCGTGGTACACGACGAAATATTCGAGGGTAACGCTGTCGCCTCTCTCGCC
GGCGGTCGGCCTTCCCGCCTTGCGAGGTGCGCCAAAAAGAACGGCGGTTG
TCGGCTGCTGCTGCTGCTGCTGCTGCTGCTCCCTACTGCCGACTGCTGCC
GAAGCTGCTGTTTGCCTGTCTCTCTCCTTTGTTCTGAATCTCGCTTGTTT
CGCTACCCCGCAAGCAATGGAATTTTCGGCCGGATGCTGGCGCGTGGTTT
CGTGGTTGTTTCCCTGCTCGCAGCTTAACTTTACGATTGAGCCGAGCGTG
TGCTTGGGCGATGCGGGGTTCGTGTCGCGGCTGTTGGCGGCGACGGTGGT
CGGGTACGACGAAATCATGGTCAACATGTTCATGTTCTCCATGAGGTCCA
AGGGTTTGCTGAAAAACACCAAGGTGAGCAGGACGGGGAGGGACCCGGCC
ACAACCACAGAGACAAAAACAACAACGACAGGAATCAACAAGCATCGGCA
ACAACGCACCCAAACGTGCTTGAATCAGACAGCAATGTCACGCGATGTGG
TATCGCAATTCCCCTGATTTTCTGCTAGGGTATAGCCCACAGTCATATGT
TCAGGCTCGGCTGCCGATGTCATCGCCGACTCTCTCCTTGCTCATGTCGC
CCCGCTGCTAGTTTGTCGAGAACTGTGCGTGATGGCCCTCTTATGCACCC
CCCCTCCCCGCCACTCGCTCTTCCGTCGTTACCTTCTTATTATGTCTCGC
AATCGTTCTGCTTTTCCTCGCCATGTCGAACTTCCCTTTGCCTTTGCTGG
GGTGGAACTGCACTGGAAATTGGAACGCAAATCAATCTCCTTGCGTGGCT
TTTATTACGACGGAACAACCAAACCTAACATGAACATCGACGATGGCGGC
GGCGGCGGCGGCGGCGGCGTTACCGGCCTATCGCTGCGAAAATTCACTCC
CTTGGCGTGACACAACTGTAAAAACGAAAACGCGAACAACGCGAACATCG
GTATCGCGGCCATAATCCCATGACCCTCCGGCCGGAACAAGACCGGGGGG
GACTGGATGTGGCCGATGGACGCGGAGCCCACCACGGGCTTCCTCCACTT
CTTCACGACCGTGGCTTTCAAGTGCGAGGTGCTGCTGCGGTCGGTGATGG
CGTTCGTACTCATGTCGACGGTGACGGCAATGACGGTGCGGACCCTGCTC
AGCTCCGGGGTGGTGATCATGTTCCCGATGATCATGCTGATGGAGAGGAT
GGGGCTCCAGGGAGTCGACATGAACGTGAGAGTTTATTTCCTTGTTTTCA
GGCTTTTTCTGTCCGTCTGTCCGTCCGTCCGTCTGTCCGTCTATCTGCCT
ACCATCTGTCTCGTCTTTTTTGTCTGTTGAGGCGCAAGGAACACATGCGG
CGAGCGGGCCGCCGCACCCATCCTCGCGTCCAAAGTCCAAACTTGCCCCG
CGGTGGCTGCCGTGGACAGCCGCGCCGGCCGCGCGGCTTTGAGCAGATTC
ATGTTTGATGCAGATTTACTTTGAGCTGTCGCAGATATTAGAGCGTGGGC
TTTGGTAGAGTGAGAGCTGCTCCAGGGGATTGGCCAGCGACCTCACATTG
TACTCTGCGTCCGTGCTCGCCCTGTACCCTCCATGCCGCCGCCGCTACCG
AACTCGCCCTCCCCGCCCCTTTCCCCTTCGTCCGCAACCGACCTTCTGCG
TGCAAGCAGCAAATGCTAGCGCTCTCGTACCCGTGGCTGGGGATGCCGAT
TGAGCATCTGCGAAATCAGAACAAGCCCATAGGGCCGTTTATCCTGGGCC
ACCTTATGCAGGTATGTGGCGAATAGAGGTGCCTTTGCTTACGTGGACGC
ACGTTCACGGGCAGGATTGTGGTGTCATATGATGCTTCCCTGCGTTATGG
ACAAAGGGGCTCAGGCGACGAATGGGGAGTTCCCGCTTCTCGTTTGTCCG
GCGCCTCGCTGGCAGGCTTATTCGTGGGTTGTGAGATGGCTACAATGTTC
GTCGGCATTATAACAACAGCGAATTCATTCTGGGTGCCGTGCCTACCCTG
TACACGGACAGGGAACGCCCTCCTACACTCCAACTGACTTTTTTCTACCA
GCTATTTTCGCGAGAGCGCGTGCTGCTTACGGCTAGGCATTTCATTTTGC
GCTGGTTGAATCTACGCATGTCGTATTATTTCGGCGTTGGTCCGATATGA
GGGCGGGCTGCATTTTTTCGATTTGGCCAGCAGAGCCTGGTAGCGGCAGC
CCCACCGCAGCCAATACCCCTACCGCCCGCTCTTCCGATCTGCTGAAGGC
TGGTTTGCCATTACTCCTACCGCTCGCTCCTCCGATCTGCCGAAGGCTGG
TTAACCATAACGCGCCGCCACAACTGGTCTGCGCAACAACCAGCGTACCC
ACACTCCCCTCGGAATCCGAGTACAGAGTCCCGTATCCAGCTGCCCAAGC
AGGTTAAACCGACGCTTTCCTTCCTTCCTTCCTTCCTTCCTTCCCTCCTC
GCTTCCTTGCTATCTTTGTTTCCCGCGTGTGCGTGTGCGTGTGCGTGTGC
GTGTGCGTGTTTGCCCAGATGGTGATCTTCTACACGGTGTACAACGCCTG
CCTGCTGGCGTGGTCCTACTGGCTCTACGGAAAGACCATGGCCACCTCTC
TTCAGGTGCGCGCTTCTTGCGTTAGAAAATGTCCCGTGTCAACAAATCGA
AAGGTGTACTACGCAGGCGAGAGACGAGGGGGAGGAGGGGATGGGATCTG
GACGTGTGAACTAAATTGAAATGTGGGTGTCGTGGGTGCTGGGAAACCTT
GGGGCGACTGCCATCAGCATACGCAACGGCGGCGACGGATTTTTGTTGCG
CCTCGCCGACAAAGATCATTCAACAGTTATCCCTAAACCCCCGTCGTTTC
TCCTCTCCACGCACATCAACCAACACCTTTCCGCACAGCCTTTCAGGCTA
ATTCTGGCAGTGACGCCCTCCCCCGGACGCAACTGTATGCCTCACGTAAT
CGCCCCCCCACCCCCTTTCCTCCAACCTACGTGCCGGGTTACTCTGTTGC
TGCCCCTTCCCTcccCCCCCGTCTCCCTTCTCAGGTGTGGTTGTACGGCA
TGGTGATGTTGTACGAATACTTTGCGCTCATCTTCGTGCGCGCGCGGTCG
AGCATCGTGTTCTTCTCGAGGACCGCTGCGCTGTCCTTCTTGGCCTTCCA
CGTGTACTTCTACCACTTCCAGATGGGTTTCTTCGGCCTCGCCGCTTGGT
GCAGCTTCTTCGGCATGTTCGCCGTGAAGCTGTACGTGCTCCAGGCAATC
GAGCTGCCGGCTTACACGAGCGGGGAGATCTCCCACGACAACCCGCGGGC
ACACTTCGTCGAGCTCCCCTGTGAGTGCCAACCATTCTTGCCGGATGTGT
GCTTGGATGTTGGCTTGTTTTGTCTGTGTTCGCGTGCGCGCGTGTGTATG
CGTGTGCGAGGGAAAAAAATCCGGACGCGCGTCTTCGGACCGCAAGGCTA
TTGCTAAGTTATGGCGCGCTTGCCTACGTTTTTCGTTTCGCCCCTTCCGC
TCTCTCCTCTCGTGTTCTTGACCTGACGCCTTTTTCCTCTCTCCCAATCT
CGCTCCGGGTTCTATCCCGTCCGCCGACTCGGTTCGCTCCTCCCTTGGCT
TCGCGCGTGCCGCCCCCCCCCCCCTTCCCCTTCCCCAATAAACGAATGAA
ATACATCAGGGCCAACGTGGGGCGCAGCCTTGCCGCCGATGTGGTCTCTC
TTCATTCCGCCGAATGCCTCCTCCGTGGGAGTCTACGGCGACGACGTCCC
GGATCGACCGGACGGTGCCGACGGTTCAGGGGCGGCGGCAGCGGCACGGG
AGGCGGCGGTAGCGGTAGGCGGAGGCGCCGCAACATCAGCAACAGTGGGA
GGCGGCGCGGGCGCCGGAGGCCGGGGTGGAGGCAGCGGCGGGCAGGGTGA
GGGGGGAGAGCGACGCGATCCCCCCGCCGCCGCGCGCAGTGGTGGTGGTG
CGGCCGAGGGCAGGGGCGGGGCAAGGGCAAGAGGACGAGAGCGACGGCGG
GCGCGGGCCGACGGATCCGCAAGAACAGAGCAGGAGAGGCCGTTGGTTGG
G
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig75:23925..30725+

>mRNA_P-fluviatile_contig75.14001.1 ID=mRNA_P-fluviatile_contig75.14001.1|Name=mRNA_P-fluviatile_contig75.14001.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4380bp|location=Sequence derived from alignment at P-fluviatile_contig75:23925..30725+ (Porterinema fluviatile SAG_2381)
ATGTCGCCACCCCGCTTCTTTTTCCTTGCCACGTGCTGCTCCAGTAGCGG
GGCGAAAGGCAGAGGCGTCCCCCGCACAACCATGGAGTATGAGAGGGCAC
TCTTTCGCGTTTACGACAAATCGATGGAAGGCTTCCATTCCCCTGCTGTG
AGGAATGCTTGCAACGTTTTGAAAAAGTGTTTCCTCGTCATCTCTGCCGG
GCTCTTTGCGACGCTTGTTCTCTTGCACCGTCAGTTCGTCAACAACCCAG
ATGTCGCCACCCCGCTTCTTTTTCCTTGCCACGTGCTGCTCCAGTAGCGG
GGCGAAAGGCAGAGGCGTCCCCCGCACAACCATGGAGTATGAGAGGGCAC
TCTTTCGCGTTTACGACAAATCGATGGAAGGCTTCCATTCCCCTGCTGTG
AGGAATGCTTGCAACGTTTTGAAAAAGTGTTTCCTCGTCATCTCTGCCGG
GCTCTTTGCGACGCTTGTTCTCTTGCACCGTCAGTTCGTCAACAACCCAG
GTTGTCTGGCGCCCTTGCTGGAGGCAGCAGCGTTGAGAGAGGGGCTGCTG
ATACCGCCCGACTCCTCGTCGCCTTCGCCTTCCTCGGCGAAGGCGTTCGT
CGGGACCGTGACAGCGAACAACACGCTGGGCGAGATAGACATCGGCGCCG
GCGGCGTGATAGTGGACCCAAACGGGCCGCCGCCAAGGCGCGAGGGAGCC
AATGGAGGAGGCAGGGAGGGTGGAGACGAGAGGGGGGAAGAGAAGAGCGG
CAGCGGCGAAGACGAGGACCATCCCACGAGGATCCAGCTCCCTTCCGGAA
GCTGGTTACCATACGACATCATGATCGGGGTCTCGATCGGTGGCGGCGGT
GGCGGTAGCTCGGGCGGCGGCGACCGGCGACGGTGGTGGGGGCTGCGCGG
CGCCTCAAACAACGGGGAAGAAGACCAGGGGCAAGGCAAGGTGGGAAGGG
ACGGTAGGAGAACGGCCGATGGCGAAGGGGGCGGGGTTGGGGCGGAGGCG
GAGGTGTCGAAGGAGGACACTGGCAAGGGAGGCGACGAAAGCAGCAACGC
CGGGTATCCGGCCGACACCGAGGGTGACTCCTCCGGGGCGACCAACAACA
CTGGGTTGTCTGGCGCCCTTGCTGGAGGCAGCAGCGTTGAGAGAGGGGCT
GCTGATACCGCCCGACTCCTCGTCGCCTTCGCCTTCCTCGGCGAAGGCGT
TCGTCGGGACCGTGACAGCGAACAACACGCTGGGCGAGATAGACATCGGC
GCCGGCGGCGTGATAGTGGACCCAAACGGGCCGCCGCCAAGGCGCGAGGG
AGCCAATGGAGGAGGCAGGGAGGGTGGAGACGAGAGGGGGGAAGAGAAGA
GCGGCAGCGGCGAAGACGAGGACCATCCCACGAGGATCCAGCTCCCTTCC
GGAAGCTGGTTACCATACGACATCATGATCGGGGTCTCGATCGGTGGCGG
CGGTGGCGGTAGCTCGGGCGGCGGCGACCGGCGACGGTGGTGGGGGCTGC
GCGGCGCCTCAAACAACGGGGAAGAAGACCAGGGGCAAGGCAAGGTGGGA
AGGGACGGTAGGAGAACGGCCGATGGCGAAGGGGGCGGGGTTGGGGCGGA
GGCGGAGGTGTCGAAGGAGGACACTGGCAAGGGAGGCGACGAAAGCAGCA
ACGCCGGGTATCCGGCCGACACCGAGGGTGACTCCTCCGGGGCGACCAAC
AACACTGGATTCTACGCGGACTACACCTTCGCGTTCGAGCCGATCGTGAT
GCTCCTCCCGGAAAAAATCCAAGAGAGCCACCAGTTCACATGGATTCTAC
GCGGACTACACCTTCGCGTTCGAGCCGATCGTGATGCTCCTCCCGGAAAA
AATCCAAGAGAGCCACCAGTTCACATGGCTTAACTTTACGATTGAGCCGA
GCGTGTGCTTGGGCGATGCGGGGTTCGTGTCGCGGCTGTTGGCGGCGACG
GTGGTCGGGTACGACGAAATCATGGTCAACATGTTCATGTTCTCCATGAG
GTCCAAGGGTTTGCTGAAAAACACCAAGCTTAACTTTACGATTGAGCCGA
GCGTGTGCTTGGGCGATGCGGGGTTCGTGTCGCGGCTGTTGGCGGCGACG
GTGGTCGGGTACGACGAAATCATGGTCAACATGTTCATGTTCTCCATGAG
GTCCAAGGGTTTGCTGAAAAACACCAAGACCGGGGGGGACTGGATGTGGC
CGATGGACGCGGAGCCCACCACGGGCTTCCTCCACTTCTTCACGACCGTG
GCTTTCAAGTGCGAGGTGCTGCTGCGGTCGGTGATGGCGTTCGTACTCAT
GTCGACGGTGACGGCAATGACGGTGCGGACCCTGCTCAGCTCCGGGGTGG
TGATCATGTTCCCGATGATCATGCTGATGGAGAGGATGGGGCTCCAGGGA
GTCGACATGAACACCGGGGGGGACTGGATGTGGCCGATGGACGCGGAGCC
CACCACGGGCTTCCTCCACTTCTTCACGACCGTGGCTTTCAAGTGCGAGG
TGCTGCTGCGGTCGGTGATGGCGTTCGTACTCATGTCGACGGTGACGGCA
ATGACGGTGCGGACCCTGCTCAGCTCCGGGGTGGTGATCATGTTCCCGAT
GATCATGCTGATGGAGAGGATGGGGCTCCAGGGAGTCGACATGAACCAAA
TGCTAGCGCTCTCGTACCCGTGGCTGGGGATGCCGATTGAGCATCTGCGA
AATCAGAACAAGCCCATAGGGCCGTTTATCCTGGGCCACCTTATGCAGCA
AATGCTAGCGCTCTCGTACCCGTGGCTGGGGATGCCGATTGAGCATCTGC
GAAATCAGAACAAGCCCATAGGGCCGTTTATCCTGGGCCACCTTATGCAG
ATGGTGATCTTCTACACGGTGTACAACGCCTGCCTGCTGGCGTGGTCCTA
CTGGCTCTACGGAAAGACCATGGCCACCTCTCTTCAGATGGTGATCTTCT
ACACGGTGTACAACGCCTGCCTGCTGGCGTGGTCCTACTGGCTCTACGGA
AAGACCATGGCCACCTCTCTTCAGGTGTGGTTGTACGGCATGGTGATGTT
GTACGAATACTTTGCGCTCATCTTCGTGCGCGCGCGGTCGAGCATCGTGT
TCTTCTCGAGGACCGCTGCGCTGTCCTTCTTGGCCTTCCACGTGTACTTC
TACCACTTCCAGATGGGTTTCTTCGGCCTCGCCGCTTGGTGCAGCTTCTT
CGGCATGTTCGCCGTGAAGCTGTACGTGCTCCAGGCAATCGAGCTGCCGG
CTTACACGAGCGGGGAGATCTCCCACGACAACCCGCGGGCACACTTCGTC
GAGCTCCCCTGTGTGGTTGTACGGCATGGTGATGTTGTACGAATACTTTG
CGCTCATCTTCGTGCGCGCGCGGTCGAGCATCGTGTTCTTCTCGAGGACC
GCTGCGCTGTCCTTCTTGGCCTTCCACGTGTACTTCTACCACTTCCAGAT
GGGTTTCTTCGGCCTCGCCGCTTGGTGCAGCTTCTTCGGCATGTTCGCCG
TGAAGCTGTACGTGCTCCAGGCAATCGAGCTGCCGGCTTACACGAGCGGG
GAGATCTCCCACGACAACCCGCGGGCACACTTCGTCGAGCTCCCCTGGCC
AACGTGGGGCGCAGCCTTGCCGCCGATGTGGTCTCTCTTCATTCCGCCGA
ATGCCTCCTCCGTGGGAGTCTACGGCGACGACGTCCCGGATCGACCGGAC
GGTGCCGACGGTTCAGGGGCGGCGGCAGCGGCACGGGAGGCGGCGGTAGC
GGTAGGCGGAGGCGCCGCAACATCAGCAACAGTGGGAGGCGGCGCGGGCG
CCGGAGGCCGGGGTGGAGGCAGCGGCGGGCAGGGTGAGGGGGGAGAGCGA
CGCGATCCCCCCGCCGCCGCGCGCAGTGGTGGTGGTGCGGCCGAGGGCAG
GGGCGGGGCAAGGGCAAGAGGACGAGAGCGACGGCGGGCGCGGGCCGACG
GATCCGCAAGAACAGAGCAGGAGAGGCCGTTGGTTGGGGGCCAACGTGGG
GCGCAGCCTTGCCGCCGATGTGGTCTCTCTTCATTCCGCCGAATGCCTCC
TCCGTGGGAGTCTACGGCGACGACGTCCCGGATCGACCGGACGGTGCCGA
CGGTTCAGGGGCGGCGGCAGCGGCACGGGAGGCGGCGGTAGCGGTAGGCG
GAGGCGCCGCAACATCAGCAACAGTGGGAGGCGGCGCGGGCGCCGGAGGC
CGGGGTGGAGGCAGCGGCGGGCAGGGTGAGGGGGGAGAGCGACGCGATCC
CCCCGCCGCCGCGCGCAGTGGTGGTGGTGCGGCCGAGGGCAGGGGCGGGG
CAAGGGCAAGAGGACGAGAGCGACGGCGGGCGCGGGCCGACGGATCCGCA
AGAACAGAGCAGGAGAGGCCGTTGGTTGGG
back to top