mRNA_P-fluviatile_contig74.13992.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig74.13992.1
Unique NamemRNA_P-fluviatile_contig74.13992.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig74.13992.1 vs. uniprot
Match: A0A6H5L8L8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8L8_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 1.090e-92
Identity = 230/277 (83.03%), Postives = 238/277 (85.92%), Query Frame = 2 
Query:  185 RDGDWACPSCNNNCYAFRTECNRCNTPKPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGDWACPSCGNNCFAFRNECNRCNTPKPGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG------EEAPAGAEPTCGKEXXXXXDNNRIYVSGLPNTITETDLVEKFSTIGIIARIRQ----KRGYKDQWPFSVRIYKDDSTGKPKGDCIIKYEEATSAHAALKWFDGIDFKGGKIAVAMAAKPSLNNRY 985
            R+GDWACPSC NNC+AFR ECNRC TPKPG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     RDGDWACPSCGNNCFAFRNECNRC TPKP G  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       EE PAG E TCGK+     DNNR+YVSGLP TITETDLV+KFSTIGIIARIRQ    KRGYKDQWPFSVRIYKD +TGKPKGDCIIKYEE  SAHAA++WFDGIDFKGGKI VAMAAKPSLNNRY
Sbjct:   75 REGDWACPSCGNNCFAFRQECNRCQTPKPGGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----RDGDWACPSCGNNCFAFRNECNRCQTPKPSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDDGREEEPAGTESTCGKDCGDECDNNRVYVSGLPTTITETDLVDKFSTIGIIARIRQARASKRGYKDQWPFSVRIYKDSNTGKPKGDCIIKYEEPNSAHAAMRWFDGIDFKGGKIGVAMAAKPSLNNRY 346
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BLAST of mRNA_P-fluviatile_contig74.13992.1 vs. uniprot
Match: D8LIQ1_ECTSI (RRM domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIQ1_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 4.930e-66
Identity = 105/121 (86.78%), Postives = 109/121 (90.08%), Query Frame = 2 
Query:  623 EEAPAGAEPTCGKEXXXXXDNNRIYVSGLPNTITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDDSTGKPKGDCIIKYEEATSAHAALKWFDGIDFKGGKIAVAMAAKPSLNNRY 985
            EE PAG E TCGK+     DNNR+YVSGLP TITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDD+TGKPKGDCIIKYEE  SAHAAL+WFDGIDFKGGKI VAMAAKPSLNNRY
Sbjct:   38 EEEPAGTESTCGKDCGDECDNNRVYVSGLPTTITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDDNTGKPKGDCIIKYEEPNSAHAALRWFDGIDFKGGKIGVAMAAKPSLNNRY 158
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BLAST of mRNA_P-fluviatile_contig74.13992.1 vs. uniprot
Match: A0A1Y1IL69_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IL69_KLENI)

HSP 1 Score: 132 bits (331), Expect = 2.220e-30
Identity = 103/220 (46.82%), Postives = 124/220 (56.36%), Query Frame = 2 
Query:  407 RDGDWACP--SCGNNCFAFRNECNRCNTPKPGG--------------------------------VGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEAPAGAEPTCGKEXXXXXDNNRIYVSGLPNTITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDDSTGKPKGDCIIKYEEATSAHAALKWFDGIDFKGGKIAVAMAAK 964
            RDGDW CP  SCGNN FA R ECNRC TP+P G                                 G            XXXXXXXXXXXXXXXXXXXX  XXX G +    A   C  +     DN RIY+SGLP+  TE ++ E FS IG I RIRQKRGYKDQWP++++IY DD+ GK KGD ++ YE+  +AH+A  +F+G   +G K+ V MA K
Sbjct:   50 RDGDWICPNPSCGNNNFAKRTECNRCGTPRPAGGAAXXXXXXXXXXXXXXARESGYNDRGGGGFRSGGGDWSRPPESREXXXXXXXXXXXXXXXXXXXXSHXXXDGGDDSGPAVKQCDDKCGDSCDNARIYISGLPDNTTEDEIRELFSGIGQIGRIRQKRGYKDQWPWNIKIYTDDA-GKQKGDGVLTYEDPAAAHSAGGFFNGHSLRGSKLTVTMAQK 268
[Close]
BLAST of mRNA_P-fluviatile_contig74.13992.1 vs. uniprot
Match: A0A803KS81_CHEQI (RRM domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803KS81_CHEQI)

HSP 1 Score: 119 bits (298), Expect = 4.470e-27
Identity = 58/117 (49.57%), Postives = 80/117 (68.38%), Query Frame = 2 
Query:  626 EAPAGAEPT----CGKEXXXXXDNNRIYVSGLPNTITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDDSTGKPKGDCIIKYEEATSAHAALKWFDGIDFKGGKIAVAMAAK 964
            +AP  AEP     C +      DN+RIY+S LP  +   +L E F +IGI+ARI+QKRGYKDQWP+S+++Y DDS GK KGD ++ YE+ ++AH+A  +F+G D +G KI V MA K
Sbjct:   89 DAPTSAEPPKVKQCDENCGDSCDNSRIYISNLPPDVAIEELRELFGSIGIVARIKQKRGYKDQWPYSIKLYTDDS-GKNKGDGVLSYEDPSAAHSARGFFNGYDIRGHKINVTMAEK 204
[Close]
BLAST of mRNA_P-fluviatile_contig74.13992.1 vs. uniprot
Match: A0A388KUY0_CHABU (Uncharacterized protein n=2 Tax=Chara braunii TaxID=69332 RepID=A0A388KUY0_CHABU)

HSP 1 Score: 127 bits (318), Expect = 4.870e-27
Identity = 122/321 (38.01%), Postives = 148/321 (46.11%), Query Frame = 2 
Query:  173 RGSTRDGDWACP--SCNNNCYAFRTECNRCNTPKPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDGDWACP--SCGNNCFAFRNECNRCNTPKPGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEA-------------------------------------------PAG------AEPT----CGKEXXXXXDNNRIYVSGLPNTITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDDSTGKPKGDCIIKYEEATSAHAALKWFDGIDFKGGKIAVAMAAK 964
            RGS RDGDW CP  SC N+ +A RTECN+C  P+P  XXXXXXXXXXXXXXXXXX                         R  DW CP  SC N  FA R ECN+C TPKP G G        XXXX         XXX                 A                                           PAG       EP     C        DN RIY+SGLP  +T  +L + F  IG +ARI+QKRGYKDQWPF++++Y+D+S G+ KGD  + YE+  +AH+A  +F+    +G +I V MA K
Sbjct:  242 RGSERDGDWLCPNPSCANSNFARRTECNKCGAPRPAGXXXXXXXXXXXXXXXXXXYDDRRGGGAGGQ-------------RGEDWTCPNPSCNNLNFARRTECNKCRTPKPQGSGGSGDAYSGXXXXRYEDRGGYGXXXRGGDRVSGFSDSSRNGYADGRGQGGEGYGAPRTDTSSGYGSDHRGGSDHRSGGSSEYKSSGPAGDYKSGEVEPVKVKQCDAHCGDTCDNTRIYISGLPLDVTTDELRDLFGGIGQVARIKQKRGYKDQWPFNIKLYQDES-GRNKGDGTLTYEDPQAAHSAGGFFNDHVIRGHQIKVTMAEK 548
[Close]
BLAST of mRNA_P-fluviatile_contig74.13992.1 vs. uniprot
Match: A0A2K1JP98_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1JP98_PHYPA)

HSP 1 Score: 120 bits (300), Expect = 4.080e-26
Identity = 99/217 (45.62%), Postives = 124/217 (57.14%), Query Frame = 2 
Query:  407 RDGDWACPS--CGNNCFAFRNECNRCNTPKPGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--------------------------EEAPAGAE---PTCGKEXXXXXDNNRIYVSGLPNTITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDDSTGKPKGDCIIKYEEATSAHAALKWFDGIDFKGGKIAVAMAAK 964
            R GDW CP+  CGN  FA R ECN+C  PKP   GXXXXXXX      XXXXXXXXXXXX        XXXXX                           EE+    +     C +      DN RIY+SGLP  + E +L E F  IG +ARI+QKRGYKDQWP++++IY+D+S GK KGD ++ YE+  +AH+A  +F+  + +G KI VAMAAK
Sbjct:   88 RSGDWTCPNVTCGNVNFARRMECNKCQAPKPQSTGXXXXXXXGYGGEQXXXXXXXXXXXXNSYDEPGHXXXXXXXYDREQGRSHESRGGXXXXXYGAQSREESKDAVDVPVKQCDENCGDSCDNARIYISGLPLDVKEDELRELFGGIGQVARIKQKRGYKDQWPYNIKIYQDES-GKNKGDAVLSYEDPHAAHSAGGFFNDYEMRGHKIKVAMAAK 303
[Close]
BLAST of mRNA_P-fluviatile_contig74.13992.1 vs. uniprot
Match: A0A7S0IE44_MICPS (Hypothetical protein (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0IE44_MICPS)

HSP 1 Score: 115 bits (288), Expect = 6.020e-26
Identity = 64/183 (34.97%), Postives = 93/183 (50.82%), Query Frame = 2 
Query:  413 GDWACPSCGNNCFAFRNECNRCNTPKPGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEAPAGAEPTCGKEXXXXXDNNRIYVSGL-PNTITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDDSTGKPKGDCIIKYEEATSAHAALKWFDGIDFKGGKIAVAMA 958
            GDW C  CGN+ F++R  C +CN PK   +                                        E+A  G   T G        +NRI++ G  P  + E DL E F  IGIIAR+RQ+ G+ DQWP +V+IYKD+S GKPK + +IKY++  +A +A  ++DG + KG K++V++A
Sbjct:   30 GDWTCDGCGNSNFSWRKTCKKCNAPKSQAL-------------------------------------KDAEKAATGGWLTAGLSDT----SNRIFIKGFDPEKVNEDDLKELFGGIGIIARVRQRHGFPDQWPHAVKIYKDES-GKPKDEAVIKYDDPMAAQSAPGFYDGFELKGSKLSVSIA 170
[Close]
BLAST of mRNA_P-fluviatile_contig74.13992.1 vs. uniprot
Match: A0A803LCU5_CHEQI (RRM domain-containing protein n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LCU5_CHEQI)

HSP 1 Score: 119 bits (298), Expect = 8.410e-26
Identity = 58/117 (49.57%), Postives = 80/117 (68.38%), Query Frame = 2 
Query:  626 EAPAGAEPT----CGKEXXXXXDNNRIYVSGLPNTITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDDSTGKPKGDCIIKYEEATSAHAALKWFDGIDFKGGKIAVAMAAK 964
            +AP  AEP     C +      DN+RIY+S LP  +   +L E F +IGI+ARI+QKRGYKDQWP+S+++Y DDS GK KGD ++ YE+ ++AH+A  +F+G D +G KI V MA K
Sbjct:  188 DAPTSAEPPKVKQCDENCGDSCDNSRIYISNLPPDVAIEELRELFGSIGIVARIKQKRGYKDQWPYSIKLYTDDS-GKNKGDGVLSYEDPSAAHSARGFFNGYDIRGHKINVTMAEK 303
[Close]
BLAST of mRNA_P-fluviatile_contig74.13992.1 vs. uniprot
Match: A9T0V1_PHYPA (Predicted protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A9T0V1_PHYPA)

HSP 1 Score: 119 bits (297), Expect = 9.680e-26
Identity = 88/204 (43.14%), Postives = 112/204 (54.90%), Query Frame = 2 
Query:  407 RDGDWAC--PSCGNNCFAFRNECNRCNTPKPGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEAPA-GAEPT---------------CGKEXXXXXDNNRIYVSGLPNTITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDDSTGKPKGDCIIKYEEATSAHAALKWFDGIDFKGGKIAVAMAAK 964
            R GDW C    CGN  FA R ECN+C   KP    XXXXXXXXX           XXXXXXX                  GA+P                C +      DN RIY+SGLP  + E +L E F  IG +AR++QKRGYKDQWP++++IY+D+S GK KGD ++ YE+  +AH+A  +F+  + +G KI VAMAAK
Sbjct:   98 RSGDWTCLNAGCGNVNFARRMECNKCQASKPQSAAXXXXXXXXXREGGGNSYDEGXXXXXXXRGHDREQGRAYESRGGGYGAQPREDITVDGSKDVPVKQCDENCGDSCDNARIYISGLPLDVKEDELQELFGGIGQVARVKQKRGYKDQWPYNIKIYQDES-GKNKGDAVLSYEDPHAAHSAGGFFNDYEMRGHKIKVAMAAK 300
[Close]
BLAST of mRNA_P-fluviatile_contig74.13992.1 vs. uniprot
Match: K8EJS2_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EJS2_9CHLO)

HSP 1 Score: 117 bits (293), Expect = 2.160e-25
Identity = 71/194 (36.60%), Postives = 94/194 (48.45%), Query Frame = 2 
Query:  410 DGDWACPSCGNNCFAFRNECNRCNTPKPGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEEAPAGA--------EPTCGKEXXXXXDNNRIYVSGL-PNTITETDLVEKFSTIGIIARIRQKRGYKDQWPFSVRIYKDDSTGKPKGDCIIKYEEATSAHAALKWFDGIDFKGGKIAVAMAAK 964
            DG W C SC N  FA+R  C RC+ PK   V                                        EE  A A        +PT          NNRI+V G  P T T  DL E F  IG+I+R+RQ+ G+ DQWP++V+IY D+STGK K +C I Y++  +A +A  ++DG DFKG KI+V++A K
Sbjct:   74 DGSWQCDSCSNTNFAWRKTCKRCDLPKSQKV--------------------------------------KDEEKKAAAGWLLDGVDDPT----------NNRIFVKGFDPETTTSDDLRELFGGIGMISRVRQRTGFPDQWPWAVKIYSDESTGKNKDECTITYDDPMAAQSAPGFYDGYDFKGKKISVSLATK 219
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig74.13992.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L8L8_9PHAE1.090e-9283.03Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LIQ1_ECTSI4.930e-6686.78RRM domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A1Y1IL69_KLENI2.220e-3046.82Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A803KS81_CHEQI4.470e-2749.57RRM domain-containing protein n=1 Tax=Chenopodium ... [more]
A0A388KUY0_CHABU4.870e-2738.01Uncharacterized protein n=2 Tax=Chara braunii TaxI... [more]
A0A2K1JP98_PHYPA4.080e-2645.62Uncharacterized protein n=2 Tax=Physcomitrium pate... [more]
A0A7S0IE44_MICPS6.020e-2634.97Hypothetical protein (Fragment) n=1 Tax=Micromonas... [more]
A0A803LCU5_CHEQI8.410e-2649.57RRM domain-containing protein n=1 Tax=Chenopodium ... [more]
A9T0V1_PHYPA9.680e-2643.14Predicted protein n=1 Tax=Physcomitrium patens Tax... [more]
K8EJS2_9CHLO2.160e-2536.60Uncharacterized protein n=1 Tax=Bathycoccus prasin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig74contigP-fluviatile_contig74:563751..570837 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size1868
Cds size1305
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig74.13992.1prot_P-fluviatile_contig74.13992.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig74 563888..570411 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817177.496119-UTR-P-fluviatile_contig74:563750..5638871622817177.496119-UTR-P-fluviatile_contig74:563750..563887Porterinema fluviatile SAG_2381UTRP-fluviatile_contig74 563751..563887 +
1693571394.993174-UTR-P-fluviatile_contig74:563750..5638871693571394.993174-UTR-P-fluviatile_contig74:563750..563887Porterinema fluviatile SAG_2381UTRP-fluviatile_contig74 563751..563887 +
1622817177.570255-UTR-P-fluviatile_contig74:570411..5708371622817177.570255-UTR-P-fluviatile_contig74:570411..570837Porterinema fluviatile SAG_2381UTRP-fluviatile_contig74 570412..570837 +
1693571395.398961-UTR-P-fluviatile_contig74:570411..5708371693571395.398961-UTR-P-fluviatile_contig74:570411..570837Porterinema fluviatile SAG_2381UTRP-fluviatile_contig74 570412..570837 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817177.5060854-CDS-P-fluviatile_contig74:563887..5639481622817177.5060854-CDS-P-fluviatile_contig74:563887..563948Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 563888..563948 +
1693571395.0024068-CDS-P-fluviatile_contig74:563887..5639481693571395.0024068-CDS-P-fluviatile_contig74:563887..563948Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 563888..563948 +
1622817177.5156465-CDS-P-fluviatile_contig74:564266..5644881622817177.5156465-CDS-P-fluviatile_contig74:564266..564488Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 564267..564488 +
1693571395.0189207-CDS-P-fluviatile_contig74:564266..5644881693571395.0189207-CDS-P-fluviatile_contig74:564266..564488Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 564267..564488 +
1622817177.5252008-CDS-P-fluviatile_contig74:565991..5661231622817177.5252008-CDS-P-fluviatile_contig74:565991..566123Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 565992..566123 +
1693571395.0304174-CDS-P-fluviatile_contig74:565991..5661231693571395.0304174-CDS-P-fluviatile_contig74:565991..566123Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 565992..566123 +
1622817177.5349832-CDS-P-fluviatile_contig74:567711..5678131622817177.5349832-CDS-P-fluviatile_contig74:567711..567813Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 567712..567813 +
1693571395.0399802-CDS-P-fluviatile_contig74:567711..5678131693571395.0399802-CDS-P-fluviatile_contig74:567711..567813Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 567712..567813 +
1622817177.5470185-CDS-P-fluviatile_contig74:568709..5688361622817177.5470185-CDS-P-fluviatile_contig74:568709..568836Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 568710..568836 +
1693571395.051959-CDS-P-fluviatile_contig74:568709..5688361693571395.051959-CDS-P-fluviatile_contig74:568709..568836Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 568710..568836 +
1622817177.5589101-CDS-P-fluviatile_contig74:569750..5704111622817177.5589101-CDS-P-fluviatile_contig74:569750..570411Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 569751..570411 +
1693571395.3836167-CDS-P-fluviatile_contig74:569750..5704111693571395.3836167-CDS-P-fluviatile_contig74:569750..570411Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 569751..570411 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig74.13992.1

>prot_P-fluviatile_contig74.13992.1 ID=prot_P-fluviatile_contig74.13992.1|Name=mRNA_P-fluviatile_contig74.13992.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=435bp
MVEGAWWWWRGAGAARGTGTGPAPAATTTAMLSARSVTAATRRSPAAAAA
AAAAAGVAMAAGAAAAADTMEAAVAAAAAAAAAAAAAAVAGTATGRAPAA
ATTALPSATSATAATLPSPGGSGAAAEAAVAVAAAGTQAGPPPAAGKGPA
PARGTVAAAATARRPPPALNPLAARSAAKSATTTASTCRGCLTPSRRPIS
WRSSAPSASSRASDRSAVTRTSGHSPSAYTRTTPRASPRATASSSTRRLP
PPTPPSSGSTASTSRGARSPSPWPRSLRLTTATRPFVARSDCGRKGGSRE
ALPCEIGIRPARFLVNDPTRRTAMRRTTGAVNLCLPPFKVPSSDASIGPD
PELLEFNREVNRIKVKSRVHAQREQRRRGAILEKPKEASMGYYVTKVEQV
LLWATALFAAWLRREAGRGEGYAHDLHTPSVVRQ*
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mRNA from alignment at P-fluviatile_contig74:563751..570837+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig74.13992.1 ID=mRNA_P-fluviatile_contig74.13992.1|Name=mRNA_P-fluviatile_contig74.13992.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7087bp|location=Sequence derived from alignment at P-fluviatile_contig74:563751..570837+ (Porterinema fluviatile SAG_2381)
GATTGCCCGGGGTGCGGCAACAACTGCTTCGCCTCCCGCAGTGAGTGTAA
CCGCTGCCAGACGCCCAAGCCACGGCGGCGGCGGCGGCGGCGGCTACGCG
GGCGGCGGTGGGGGCTACGGCGGAGGCGGCGGCGGTTATGGTGGAGGGGG
CGTGGTGGTGGTGGCGGGGGGCAGGGGCAGCACGAGGGACGGGGACTGGT
GAGCGGAGTGGTAGATGAAGAGCAAGCCAAGAGGCGTATCATTCTTGGCC
GAAATCGGGCGCATTGCGCGTTGCTGAATGATGGCTTCCTGTTGAAAAAT
ACTCTCGAAGCATTATGGAGGGGCAGGGGCGGGCGTTTTTGTAGCCCCCA
CGCCCCCCTTCTCCATCTCTACCCAATGCAAGAACTAGTGAAAACCGTGA
TTCGAATATCCCAACCAACACGTATGGGGGGTTTGGACCACAAGAAAACA
CGCCGCATACAGTTTGTGAAGGCAAACATGTAATATTTCCGGTTGTGTTG
TTTCCTCCCACCTCAGGGCCTGCCCCAGCTGCAACAACAACTGCTATGCT
TTCCGCACGGAGTGTAACCGCTGCAACACGCCGAAGCCCGGCGGCGGCGG
CGGCGGCGGCGGCGGCGGCGGGGGTGGCTATGGCGGCGGGCGCGGCGGCG
GCGGCGGATACGATGGAGGCGGCGGTCGCGGCGGCGGCGGCGGCGGCGGC
GGCGGCGGCGGCGGCGGCGGTGGCAGGGACGGCGACTGGTAAGAGTAAAA
ACCCAGGGTCTATTTACCGCTAGCCTACCGTAGGCCACGCAAGATGTCAC
ACGTTCTCGGTCGATCTTCAACCCTCGATCACCCCGCGGTATGAGAGGCC
ATTGCGTGAAACGGAGCGGCTTTCAAAAGATTGTGTCGAAAGCTTTGTCG
TGACCCATAATTGGATACCGGCCGACCCCTCGTCGTTGAGATGTAGAGCC
TGTGACAGCGGGGGTGTGATAACTTTTGCGACCCACGGTAGTGGACCGGA
GAAGATTTGGCCATGCAAATACTAAAACACCCTCGAGTGGCAGTAGTTGT
GGCAATGTCCTCTTTGCGGTTAATGGTATGGCCCTCTGAGGGACCGACCC
TTCCTCATTGGTTACCCGACCTGACGGGACGGGAGTAGACGTTACGAACG
AGACGGAACGACACGGAGTGGGACAGGATGGGTTGCGACAGGATGAGATG
GGATGGGATGGGAGGGAACGAGACGAAATTGGACGACATCGGATGGGGTG
GTTAGTGATGGGAGCGGTGGGACGAGATTGGTAGGGACGAGACGGAAGGA
GACGGGATGGGTGCGGACGGGACGGGACGTGACGGGCTGGGAAAGGATGG
GACGTGACGGTCTGGGATAGGATGGGACTGACGGTCTGGGATAGGATGGG
ACGTGACGGGCTGGGATAGGATGGGACGGGACGGGACGCGACGGGACGAA
TTGCGGTGGTATTGGACGGTGTCACGGATTTCGGCCGTTGCCGGCGACTC
GTTTGGTCTATTGCACCGCGAACCGCATCGGAGAAAGTCGTGCACACGTC
GCCCGCCTTCCATATCGCACCACATCGGTGGGGCATGTCTCTTTCAATCC
TCCCGCCAATCGTACCTCCTAGAGGAAGATAGGTGGGATCGTTGTTTTGC
GCTGCTCTACGTAGGCTCGAGATTTTACCTATTAAAAAAAAAGGGACAAT
CCAATTGATAGCATCAAGACGCCCCCTACGTTGATTTCGATAGATCCGGA
TGGCATTGGCGATCACTTGCCGATTGGATCTTTAGTCCGATCACACGCGA
ATCGCCCTCCGGTATTTGAGGCGTCTTCTTTGTTAAGTCGATTTTTCCCA
TCGATATACGTGTATCTCCTTTCGGTGGTTTGTGAAAGGATATCGGTGGC
GCGCATGATTTTCTCTGGGTTTTTTTCGCCAATGATTCCGGTGATCATCC
TTCGCTGCGGCAGCAAAGACTGATCGCGATGCCCTCTTGTGCTGGTTCGC
AGTTTTGCGCCGCTGTCCAGAGACGATCGAATCCTCTCCCTCGCGTGATC
CCCCCTCCAGTTTCAGCCGCATTCAGCGCCTTCCCCCAAAAAAAAAAAAA
CATACACGCACGCGTTCAGATTTTTTTTTGCGTCCACCGACTCTCCTTCC
CCCTTTCGATCTTTCTTTTTACAAGCATGACATCCCGTTGTGCTGCCCTT
GTCCGCTTCACTTTTTTGTTACGTGCCCTATTTTCCTCTAGGGCGTGCCC
CAGCTGCGGCAACAACTGCTTTGCCTTCCGCAACGAGTGCAACCGCTGCA
ACACTCCCAAGCCCGGGGGGGTCGGGGGCGGCGGCGGAGGCGGCGGTGGC
CGTGGCGGCGGCCGGGACGCAAGGTAAGGCCTTGACATCAATTGACACTA
AGTTTTTCGAAGAATATCGTCCGACATAACGTCGCCGGAAACTCGCCTGC
GGTCTTGATTTCCCTCGCTGTCTCTTACCCCCCACACTCCTCTCTCCCTC
TCTCATTCTCTCTCCCCCTCTTTTACTCTCTCTGCCCCTCGCCTCTCCCT
CTCTCTCTCTCTCTCTCGTTTCTTTTCTCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCTCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCGTT
CTGTTTCGCTTCGCGTCCTGCTTCTCCAATTCCACCGCTGAACCCAATCC
TCAAGTTTCAACCGCCGAACCGCCGTTCGAAGCGAATTGGCATTTTCAAA
TACCAGTGGCCTTTACCCTCGAAACTCTATCCCGAGCTTCCGCAATAATC
TTTGAGTTACCCCCCTCAGTGAGCCCCCATCAACAAGAGGATAAAGAAGA
AAGCGCCGAAACAGCACGACAAGCAATAAGTTGACCTCCGGGGTGATCGC
TTGTTGTTTAAAATGCCCCCCTCCCTTTGGGTTATCCCCGGGCATTACCT
CTCTGGTGAAAACGTGTTCCACACCCAGGGAAAAACACATAAAATCTAGA
ACTTGATTCCGCAGCTGTCCATTGGCGTTGCTGATCCGCTAGCTTATGAG
GGATTTCGTAAAAGCGTAGCTTGCCCGCTGGCCATGTGATGCGGCGCGTA
GACGCCGAGCGTGTAGCAGCCTCTCGCCTCGGTTTGCCCGATCCCTTTGG
CCTCTTGGCTACTCGGTGGAGGTTGCAAAAGCGTCCCCATCGGCTGTTAT
CTTTCCGCTGCTTCTTGAATGCCATTTCGTGTATGGTATTCAGGTCCTCC
ATGGTTGCCGGCGTCGCTGCAAGTGTGTGAATTTTAGCTCGGCCCCTACG
GGCTTCACCTCAGGGGTGACCCTTGAGAGAATTGAACGTTTCGCTCCCTA
CCCTTTGAGCTATAGTCCCGGGGTTAGCGTTTTGCACAAGAAAAGGTGCC
TTTCCCCACTCTGATAACCCAAAAGATGCATCGGTTGTCCCTAGAGCGGG
AACAGCGTCAGAGCTGCCTGGTCACTTGTGCCTCTGTGCGTAGAATCTAC
GCCACGCTGGTCGCCTGAGCGGCGAACTCGTTTTTTTTTTTCCCGGCCAG
CATGGAAGCGTCCGACGTGTTCGTAGCAAACCGACACGAGAAAACTCGGG
AATCTTACCTCCTTCATGAGTTTGCCGGCTTGTGCTCTCCTCTTCATTTC
ATACCGTCATGAGCGCGAACATGCCCCCCGCCGTGCCCCCCTCAAACGAC
AGTTCGCTTGAGACCCGGCTGGCAGCTGTATCTGATCCTTTGAAGAAGAA
TCTTGCTCTTCTTCGTCAAACCATGAACGGCATATGCCTGCAATTAAAAA
CGCAAAACTCGGCGCAATTTTCATCGATGTTTCCTCCCCTTGCTGCGGGT
GCTGCAACCGGTGCTGCAATGGTTGACTCAAGCTTGGCCAATGAAGTTAA
TTTCGGCGGTGACATGTTTCATGTGCGTACGGATGCGGCCCGTGTATATA
CGTCTGGAAAGCAGGTCCCCCCCCCGCCGCAGGGAAAGGTCCCGCTCCCG
CTCGAGGGACCGTAGCGGCGGCGGCTACGGCGAGGAGGCCCCCGCCGGCG
CTGAACCCACTTGGTGAGCCTTTCGTCTTTGTGCGTCGTCTCAAGTATTA
TTATGATTATGTTATTTTTCCTTTTTTTATTGGTTGTTGTGTGAAAAGGG
TGTTTGCCCGAGATGAGATAAGGTGCCCCAAGCCTTATATACTGACATGT
GGTACCCACATACCCCCCCGGATACGAGCGAGCGGACAGCTCAGCATAGT
AGACAGATACGCGGGTACCACGACGCACCCCCCGTAGCATGTACGGTAAC
CGGAACCCGACCGGCTGGCGGCGGACAAAAAAACCACCCATTTTCACGTG
CCCGGATTCGAACCCGGGACTTCAAAATTGCAGGGATGACAATCCTGCCG
TCGATGCCACTTGTGAAAAGGGTGTTTGCCCGACATGAGATAAGGTGCCC
CAAGCCTTATATACTGACATGTGGTACCCACAGTTGTAATTGTTATTTCC
ATTATTATTTTTGTAGTGCGCCCCTGCCTGGAACCGAGTTTGCTTGCACC
ACGCCTTTTTTTTCGTGGGATTTCGAAGGAGATTTTTGGTGCGATGCACA
CACGCCGCCGCTGTTTGCTACCCAGCGAGCAGGTTGCACGTAGCGTACCC
TCCCCCCCCTTCTCTCATCTGCAACGGTTGCGGCGAATAGCACCGCGATT
AATCGTGATAGTTCCATTTCTGAACAAAACCCTTCGTAGAATTCTAACCT
TGTTTTTGTTTTTTCTGCGGCCAAGGATCGCGCAGAAGAGTTTGCGATCA
TACGCATTTGTATTCCCAGTACCGTACCAGTTGATTTTTTCAATGTTTAA
TTGTTTCTCTTTTCCAGCGGCCAATGATTGCGGAGAAGATTGAGCGATCA
ATCATTTCTTACATTCCGTTTCATCTTATCATTGCCTTGAATATTTTTAT
TTCCCCCAGCGGCAAGGAGTGCGGCGAAGAGTGCGACAACAACCGCATCT
ACGTGTCGGGGTTGCCTAACACCATCACGGAGACCGATCTCGTGGAGAAG
TTCAGCACCATCGGCATCATCGCGCGCATCAGACAGGTATGTATGAAAAA
GCATCTCTCCCTGTGTTCTCGCTGTACGTTTCCCGTCATGTCCTCCAGGT
TTGTGTCCGGACCTGTCGAAATCTCAAGTCAAAATCATGCGGGGTTCACT
TCCCGTACCAGACAGCGTCAACTGTAATTTTAAGCGGCAGAGCTCGGCCT
CATCGGGCCTGTCCACAATCGATATTCATTGAATCGGTAGTGTTTGTCAC
GGAGGGTGGGAAGTGGGACGCGGTGGGCCGATGGGTGTCCTCTTGCTATC
TGTCTCACTGCTTGTTTCGATGGAGACATAGTCTATTAACAGTCTGTTCA
TGTACTAATGTATTTCTTTGTTTTACGGGTTTTCTCGACTGGCGGGAAAG
ATCAATGGGTCGTTCGCTTAACTCGTTTCACGGTTCATTTTCGTCTGGCG
GGAAAGGTCAGGGGCCGTTCGCTTGTCACCGTCCCCCAATGACGCTCCGC
GCCGGCGAGCTCCCGTGTCTCGCTTACCGTTTCTACCCCTCCTTTCTGGC
ACGCTTGTGCTCATGATTTAAGACTAAGACGCGACGGTCGTTGCTCGAAG
GACAATGCGAGAGGAAGGCAAACCGCGAATACAATACGCCACGAAACCTG
TCAAATGAAGGATACAGCCTGGGTGCCGTCGTCGTCCCGGCGATTCCCTG
TTCAACCGGCGATGCCCCATTGAGCGGGTGCAAGATCCCGTGACACCGGT
GCATTCCGGCTAAATAATCCATGCTCGAGTTCAGCATCAATGCCCTGAAA
AGCGGTCAAGGAATCATCTCTCACTATGGACCGCTAAAACGGGCCCACAA
GCTTAAGCTTACATAAACTTAAAATTAATGATTTTGGCGGACCGCTTTTT
CTCGTTACCCACCCCTTTTTTTTCGCGACGCCCGATCTACCCGAGAGCAG
AAGCGCGGTTACAAGGACCAGTGGCCATTCTCCGTCCGCATATACAAGGA
CGACTCCACGGGCAAGCCCAAGGGCGACTGCATCATCAAGTACGAGGAGG
CTACCTCCGCCCACGCCGCCCTCAAGTGGTTCGACGGCATCGACTTCAAG
GGGGGCAAGATCGCCGTCGCCATGGCCGCGAAGCCTTCGCTTAACAACCG
CTACTAGGCCATTTGTAGCTCGATCCGATTGCGGTCGAAAAGGAGGCAGC
CGTGAAGCTCTCCCTTGCGAAATCGGCATAAGGCCGGCTCGATTTTTGGT
TAACGATCCGACTAGACGTACAGCCATGCGGCGGACTACGGGGGCCGTGA
ACCTTTGCCTACCCCCCTTTAAGGTGCCCTCGAGTGACGCATCGATTGGA
CCAGATCCCGAGTTGCTCGAGTTTAATCGAGAAGTCAATCGAATCAAAGT
AAAGTCAAGAGTCCACGCACAAAGGGAGCAAAGGAGGAGGGGGGCGATAT
TGGAGAAGCCCAAGGAGGCCTCGATGGGTTACTACGTTACGAAGGTCGAA
CAGGTGCTGCTCTGGGCAACCGCCTTATTTGCGGCGTGGCTACGTCGAGA
GGCAGGGAGGGGAGAGGGCTATGCTCATGATTTGCATACCCCGTCAGTCG
TTCGGCAATAGCGGAGGATGGGGAGGTTATAGGGGGGAGGTGGGGCGGGG
ATTACGAGAGGCGATGATCAAATGGAGTGATGAGGCCCCGGTTCTTGACC
GAAAAACAACGAACAATGTCAACGCCAGTCGGAGGAAAGTCGTCATCGTG
CCGGAATCGTGTCGGTGTACGACACGTTCGTTGGTGAACTAGCATCGGTT
GTTAGAGTGGAGCAGGTAGGGAGGGCGGGACGATACGAGGCGATCGTCAC
GTGCCCTGACCGCAGGCGGCCTACCTGCCGGCCTGTATCGACTGGCAAGC
TCGTTTCAGCCGCTCGCAGGGCTTTCGGCGTCGCCTTGCCTCATCAAATA
TTCACGCGATCTTGGATTCAGGCATCGTGTAGTACAGGTGCACATGATCG
CACCAGAGTTTGCGTCAGGGTGGTGGGGTTCGAAAAA
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Coding sequence (CDS) from alignment at P-fluviatile_contig74:563751..570837+

>mRNA_P-fluviatile_contig74.13992.1 ID=mRNA_P-fluviatile_contig74.13992.1|Name=mRNA_P-fluviatile_contig74.13992.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2610bp|location=Sequence derived from alignment at P-fluviatile_contig74:563751..570837+ (Porterinema fluviatile SAG_2381)
ATGGTGGAGGGGGCGTGGTGGTGGTGGCGGGGGGCAGGGGCAGCACGAGG
GACGGGGACTGATGGTGGAGGGGGCGTGGTGGTGGTGGCGGGGGGCAGGG
GCAGCACGAGGGACGGGGACTGGGCCTGCCCCAGCTGCAACAACAACTGC
TATGCTTTCCGCACGGAGTGTAACCGCTGCAACACGCCGAAGCCCGGCGG
CGGCGGCGGCGGCGGCGGCGGCGGCGGGGGTGGCTATGGCGGCGGGCGCG
GCGGCGGCGGCGGATACGATGGAGGCGGCGGTCGCGGCGGCGGCGGCGGC
GGCGGCGGCGGCGGCGGCGGCGGCGGTGGCAGGGACGGCGACTGGGCCTG
CCCCAGCTGCAACAACAACTGCTATGCTTTCCGCACGGAGTGTAACCGCT
GCAACACGCCGAAGCCCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGG
GGTGGCTATGGCGGCGGGCGCGGCGGCGGCGGCGGATACGATGGAGGCGG
CGGTCGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGCGGTG
GCAGGGACGGCGACTGGGCGTGCCCCAGCTGCGGCAACAACTGCTTTGCC
TTCCGCAACGAGTGCAACCGCTGCAACACTCCCAAGCCCGGGGGGGTCGG
GGGCGGCGGCGGAGGCGGCGGTGGCCGTGGCGGCGGCCGGGACGCAAGGG
CGTGCCCCAGCTGCGGCAACAACTGCTTTGCCTTCCGCAACGAGTGCAAC
CGCTGCAACACTCCCAAGCCCGGGGGGGTCGGGGGCGGCGGCGGAGGCGG
CGGTGGCCGTGGCGGCGGCCGGGACGCAAGCAGGTCCCCCCCCCGCCGCA
GGGAAAGGTCCCGCTCCCGCTCGAGGGACCGTAGCGGCGGCGGCTACGGC
GAGGAGGCCCCCGCCGGCGCTGAACCCACTTGCAGGTCCCCCCCCCGCCG
CAGGGAAAGGTCCCGCTCCCGCTCGAGGGACCGTAGCGGCGGCGGCTACG
GCGAGGAGGCCCCCGCCGGCGCTGAACCCACTTGCGGCAAGGAGTGCGGC
GAAGAGTGCGACAACAACCGCATCTACGTGTCGGGGTTGCCTAACACCAT
CACGGAGACCGATCTCGTGGAGAAGTTCAGCACCATCGGCATCATCGCGC
GCATCAGACAGCGGCAAGGAGTGCGGCGAAGAGTGCGACAACAACCGCAT
CTACGTGTCGGGGTTGCCTAACACCATCACGGAGACCGATCTCGTGGAGA
AGTTCAGCACCATCGGCATCATCGCGCGCATCAGACAGAAGCGCGGTTAC
AAGGACCAGTGGCCATTCTCCGTCCGCATATACAAGGACGACTCCACGGG
CAAGCCCAAGGGCGACTGCATCATCAAGTACGAGGAGGCTACCTCCGCCC
ACGCCGCCCTCAAGTGGTTCGACGGCATCGACTTCAAGGGGGGCAAGATC
GCCGTCGCCATGGCCGCGAAGCCTTCGCTTAACAACCGCTACTAGGCCAT
TTGTAGCTCGATCCGATTGCGGTCGAAAAGGAGGCAGCCGTGAAGCTCTC
CCTTGCGAAATCGGCATAAGGCCGGCTCGATTTTTGGTTAACGATCCGAC
TAGACGTACAGCCATGCGGCGGACTACGGGGGCCGTGAACCTTTGCCTAC
CCCCCTTTAAGGTGCCCTCGAGTGACGCATCGATTGGACCAGATCCCGAG
TTGCTCGAGTTTAATCGAGAAGTCAATCGAATCAAAGTAAAGTCAAGAGT
CCACGCACAAAGGGAGCAAAGGAGGAGGGGGGCGATATTGGAGAAGCCCA
AGGAGGCCTCGATGGGTTACTACGTTACGAAGGTCGAACAGGTGCTGCTC
TGGGCAACCGCCTTATTTGCGGCGTGGCTACGTCGAGAGGCAGGGAGGGG
AGAGGGCTATGCTCATGATTTGCATACCCCGTCAGTCGTTCGGCAATAGA
AGCGCGGTTACAAGGACCAGTGGCCATTCTCCGTCCGCATATACAAGGAC
GACTCCACGGGCAAGCCCAAGGGCGACTGCATCATCAAGTACGAGGAGGC
TACCTCCGCCCACGCCGCCCTCAAGTGGTTCGACGGCATCGACTTCAAGG
GGGGCAAGATCGCCGTCGCCATGGCCGCGAAGCCTTCGCTTAACAACCGC
TACTAGGCCATTTGTAGCTCGATCCGATTGCGGTCGAAAAGGAGGCAGCC
GTGAAGCTCTCCCTTGCGAAATCGGCATAAGGCCGGCTCGATTTTTGGTT
AACGATCCGACTAGACGTACAGCCATGCGGCGGACTACGGGGGCCGTGAA
CCTTTGCCTACCCCCCTTTAAGGTGCCCTCGAGTGACGCATCGATTGGAC
CAGATCCCGAGTTGCTCGAGTTTAATCGAGAAGTCAATCGAATCAAAGTA
AAGTCAAGAGTCCACGCACAAAGGGAGCAAAGGAGGAGGGGGGCGATATT
GGAGAAGCCCAAGGAGGCCTCGATGGGTTACTACGTTACGAAGGTCGAAC
AGGTGCTGCTCTGGGCAACCGCCTTATTTGCGGCGTGGCTACGTCGAGAG
GCAGGGAGGGGAGAGGGCTATGCTCATGATTTGCATACCCCGTCAGTCGT
TCGGCAATAG
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