mRNA_P-fluviatile_contig74.13983.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig74.13983.1
Unique NamemRNA_P-fluviatile_contig74.13983.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig74.13983.1 vs. uniprot
Match: D7FWJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWJ7_ECTSI)

HSP 1 Score: 88.2 bits (217), Expect = 6.940e-18
Identity = 38/61 (62.30%), Postives = 50/61 (81.97%), Query Frame = 3 
Query:  435 MGDEEPSYESATRDVLLSAAKIIGEKCVNENLAFAKCKAENSDPEKCLKLGLDVLQCNNRV 617
            MG+E+  + SATRDVL+S AK++G  CV+ENLAF KCKAENSDPE C+KLG+ VL+C ++ 
Sbjct:    1 MGEEDMPFPSATRDVLISTAKLLGSSCVDENLAFTKCKAENSDPEACMKLGVAVLECTSKA 61
[Close]
BLAST of mRNA_P-fluviatile_contig74.13983.1 vs. uniprot
Match: G0SUU6_RHOT2 (NADH-ubiquinone oxidoreductase n=5 Tax=Rhodosporidium toruloides TaxID=5286 RepID=G0SUU6_RHOT2)

HSP 1 Score: 73.9 bits (180), Expect = 4.560e-12
Identity = 34/84 (40.48%), Postives = 48/84 (57.14%), Query Frame = 3 
Query:  480 LLSAAKIIGEKCVNENLAFAKCKAENSDPEKCLKLGLDVLQCNNRVLSKIGSTCPDEFEAFRSCMDKTQMNFAMCRESEKALRD 731
            L SA+  +GE C   N  F  CKAEN DPE CLK G  V +C   +++K+ STC  EF+A   C++     F +CR+ E+   +
Sbjct:   18 LKSASFFLGEYCKPYNEDFMLCKAENRDPEHCLKEGRKVTRCAQDLIAKVRSTCLKEFDAHWQCLENNNQEFYLCRKEERVFNN 101
[Close]
BLAST of mRNA_P-fluviatile_contig74.13983.1 vs. uniprot
Match: A0A0M0JYK2_9EUKA (NADH dehydrogenase 1 alpha subcomplex 8 n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JYK2_9EUKA)

HSP 1 Score: 71.2 bits (173), Expect = 1.730e-11
Identity = 34/103 (33.01%), Postives = 57/103 (55.34%), Query Frame = 3 
Query:  435 MGDEEPSYESATRDVLLSAAKIIGEKCVNENLAFAKCK-AENSDPEKCLKLGLDVLQCNNRVLSKIGSTCPDEFEAFRSCMDKTQMNFAMCRESEKALRDAYH 740
            M +  PS      + L +AA++IG KC +ENL F KCK  +  +P  C   G +V +C   +  +I +    EF+A+ SC+D   +  AMC++++ A   A++
Sbjct:    1 MSEVGPSSRPPKANELYAAARVIGNKCFDENLEFMKCKETKGGEPSACAAEGQEVHKCVYGLYKEISAKAGAEFKAYASCLDGADLRVAMCKKTQSAFETAFY 103
[Close]
BLAST of mRNA_P-fluviatile_contig74.13983.1 vs. uniprot
Match: A0A6L2NXU0_TANCI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A6L2NXU0_TANCI)

HSP 1 Score: 70.9 bits (172), Expect = 2.300e-11
Identity = 34/89 (38.20%), Postives = 49/89 (55.06%), Query Frame = 3 
Query:  468 TRDVLLSAAKIIGEKCVNENLAFAKCKAENSDPEKCLKLGLDVLQCNNRVLSKIGSTCPDEFEAFRSCMDKTQMNFAMCRESEKALRDA 734
            T  VL+SA+K I  +C  EN+AF KCK ++S+PEKCL+ G  V +C   +L  +   C  E +++  CM      F  CR  +K    A
Sbjct:   11 TSAVLMSASKHIATRCRGENVAFLKCKKDDSNPEKCLEKGRQVTRCVLSLLRDLHQQCTKEMDSYAGCMYYNTDEFERCRPEQKKFEKA 99
[Close]
BLAST of mRNA_P-fluviatile_contig74.13983.1 vs. uniprot
Match: J4HW73_9APHY (NADH-ubiquinone oxidoreductase n=1 Tax=Fibroporia radiculosa TaxID=599839 RepID=J4HW73_9APHY)

HSP 1 Score: 71.2 bits (173), Expect = 6.320e-11
Identity = 35/82 (42.68%), Postives = 48/82 (58.54%), Query Frame = 3 
Query:  480 LLSAAKIIGEKCVNENLAFAKCKAENSDPEKCLKLGLDVLQCNNRVLSKIGSTCPDEFEAFRSCMDKTQMNFAMCRESEKAL 725
            L SAA  +G  C + N  F  CKAEN DPE CLK G  V +C   ++SK+  +C  EFE   +C++K    +  CR+ E+AL
Sbjct:   37 LKSAAFFLGAYCKDYNDDFMLCKAENRDPEHCLKEGRRVTRCAIDLISKMRDSCMQEFEQHWTCLEKNNQEYYPCRKPERAL 118
[Close]
BLAST of mRNA_P-fluviatile_contig74.13983.1 vs. uniprot
Match: A0A6A6KHU1_HEVBR (CHCH domain-containing protein n=4 Tax=rosids TaxID=71275 RepID=A0A6A6KHU1_HEVBR)

HSP 1 Score: 68.6 bits (166), Expect = 1.610e-10
Identity = 32/89 (35.96%), Postives = 51/89 (57.30%), Query Frame = 3 
Query:  468 TRDVLLSAAKIIGEKCVNENLAFAKCKAENSDPEKCLKLGLDVLQCNNRVLSKIGSTCPDEFEAFRSCMDKTQMNFAMCRESEKALRDA 734
            T  VL +++K I  +C+ EN+AF KCK ++ +PEKCL  G +V +C   +L  +   C  E +A+  CM      F +CR+ ++A   A
Sbjct:   14 TSAVLTASSKHISARCLQENVAFLKCKKKDPNPEKCLDKGQEVTRCVLGLLKDLHQRCTKEMDAYVGCMYYHTNEFDLCRKEQQAFEKA 102
[Close]
BLAST of mRNA_P-fluviatile_contig74.13983.1 vs. uniprot
Match: A0A7S3UBL5_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3UBL5_9CHLO)

HSP 1 Score: 69.3 bits (168), Expect = 1.660e-10
Identity = 31/85 (36.47%), Postives = 50/85 (58.82%), Query Frame = 3 
Query:  477 VLLSAAKIIGEKCVNENLAFAKCKAENSDPEKCLKLGLDVLQCNNRVLSKIGSTCPDEFEAFRSCMDKTQMNFAMCRESEKALRD 731
            VL+SA+K I   C + N AF +CKA++ +P  CLK G  V +C  ++L ++ +  P+EF ++  CMD    N   CR+ +  L +
Sbjct:   43 VLMSASKYIARSCKDVNKAFMECKAKDLNPSACLKEGEAVTECLLKLLKRLHTEAPEEFNSYVKCMDYHSNNLEKCRKEQAILEE 127
[Close]
BLAST of mRNA_P-fluviatile_contig74.13983.1 vs. uniprot
Match: A0A0C3QR08_9AGAM (NADH-ubiquinone oxidoreductase n=1 Tax=Tulasnella calospora MUT 4182 TaxID=1051891 RepID=A0A0C3QR08_9AGAM)

HSP 1 Score: 69.7 bits (169), Expect = 2.170e-10
Identity = 37/94 (39.36%), Postives = 50/94 (53.19%), Query Frame = 3 
Query:  450 PSYESA--TRDVLLSAAKIIGEKCVNENLAFAKCKAENSDPEKCLKLGLDVLQCNNRVLSKIGSTCPDEFEAFRSCMDKTQMNFAMCRESEKAL 725
            PS E    T   L SAA  IG  C + N  F  CKAEN +PE CLK G  V +C   +++K+   C  EF+    C++     + MCR+ E+AL
Sbjct:   25 PSVEEVGTTSAPLKSAAFFIGAYCKDFNEDFMLCKAENRNPEHCLKEGRKVTRCATDIITKLRENCLAEFDKHWQCLENNNQQYYMCRKPERAL 118
[Close]
BLAST of mRNA_P-fluviatile_contig74.13983.1 vs. uniprot
Match: Q1KUV1_9ROSI (CHCH domain-containing protein n=1 Tax=Tarenaya spinosa TaxID=228870 RepID=Q1KUV1_9ROSI)

HSP 1 Score: 67.4 bits (163), Expect = 4.110e-10
Identity = 34/89 (38.20%), Postives = 48/89 (53.93%), Query Frame = 3 
Query:  468 TRDVLLSAAKIIGEKCVNENLAFAKCKAENSDPEKCLKLGLDVLQCNNRVLSKIGSTCPDEFEAFRSCMDKTQMNFAMCRESEKALRDA 734
            T  VL + AK IG + + EN+AF KCK  +S+PEKCL  G DV +C   +L  +   C  E +A+  C+      F +CR  + A   A
Sbjct:   14 TSSVLTALAKHIGVRYMPENVAFLKCKKNDSNPEKCLDKGRDVTRCALGLLKDLHQKCTKEMDAYVGCLYYYTNEFDLCRNEQLAFEKA 102
[Close]
BLAST of mRNA_P-fluviatile_contig74.13983.1 vs. uniprot
Match: S8DNJ9_FOMPI (NADH-ubiquinone oxidoreductase n=5 Tax=Fomitopsidaceae TaxID=1769247 RepID=S8DNJ9_FOMPI)

HSP 1 Score: 68.9 bits (167), Expect = 4.120e-10
Identity = 35/87 (40.23%), Postives = 49/87 (56.32%), Query Frame = 3 
Query:  465 ATRDVLLSAAKIIGEKCVNENLAFAKCKAENSDPEKCLKLGLDVLQCNNRVLSKIGSTCPDEFEAFRSCMDKTQMNFAMCRESEKAL 725
            AT   L SAA  +G  C + N  F  CKAEN DPE CLK G  V +C   +++K+  +C  EFE   +C++K    +  CR+ E+ L
Sbjct:   33 ATSAPLKSAAFFLGAYCKDYNEDFMLCKAENRDPEHCLKEGRRVTRCAIDLITKMRESCAAEFEQHWNCLEKHNQEYYPCRKPERTL 119
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig74.13983.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
D7FWJ7_ECTSI6.940e-1862.30Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
G0SUU6_RHOT24.560e-1240.48NADH-ubiquinone oxidoreductase n=5 Tax=Rhodosporid... [more]
A0A0M0JYK2_9EUKA1.730e-1133.01NADH dehydrogenase 1 alpha subcomplex 8 n=1 Tax=Ch... [more]
A0A6L2NXU0_TANCI2.300e-1138.20NADH dehydrogenase [ubiquinone] 1 alpha subcomplex... [more]
J4HW73_9APHY6.320e-1142.68NADH-ubiquinone oxidoreductase n=1 Tax=Fibroporia ... [more]
A0A6A6KHU1_HEVBR1.610e-1035.96CHCH domain-containing protein n=4 Tax=rosids TaxI... [more]
A0A7S3UBL5_9CHLO1.660e-1036.47Hypothetical protein n=1 Tax=Picocystis salinarum ... [more]
A0A0C3QR08_9AGAM2.170e-1039.36NADH-ubiquinone oxidoreductase n=1 Tax=Tulasnella ... [more]
Q1KUV1_9ROSI4.110e-1038.20CHCH domain-containing protein n=1 Tax=Tarenaya sp... [more]
S8DNJ9_FOMPI4.120e-1040.23NADH-ubiquinone oxidoreductase n=5 Tax=Fomitopsida... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig74contigP-fluviatile_contig74:454921..458820 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score77.0
Seed ortholog evalue5.7e-12
Seed eggNOG ortholog130081.XP_005709220.1
Preferred nameNDUFA8
KEGG koko:K03952
KEGG TC3.D.1.6
KEGG Pathwayko00190,ko01100,ko04714,ko04723,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04714,map04723,map04932,map05010,map05012,map05016
KEGG ModuleM00146
GOsGO:0003674,GO:0003824,GO:0003954,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005746,GO:0005747,GO:0005758,GO:0006091,GO:0006119,GO:0006120,GO:0006139,GO:0006163,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0007005,GO:0008137,GO:0008150,GO:0008152,GO:0009117,GO:0009123,GO:0009126,GO:0009141,GO:0009144,GO:0009150,GO:0009161,GO:0009167,GO:0009199,GO:0009205,GO:0009259,GO:0009536,GO:0009987,GO:0010257,GO:0015980,GO:0016020,GO:0016043,GO:0016310,GO:0016491,GO:0016651,GO:0016655,GO:0017144,GO:0019637,GO:0019693,GO:0019866,GO:0022607,GO:0022900,GO:0022904,GO:0030964,GO:0031090,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032981,GO:0032991,GO:0033108,GO:0034622,GO:0034641,GO:0042773,GO:0042775,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044429,GO:0044444,GO:0044446,GO:0044455,GO:0044464,GO:0044877,GO:0045271,GO:0045333,GO:0046034,GO:0046483,GO:0050136,GO:0055086,GO:0055114,GO:0065003,GO:0070013,GO:0070469,GO:0071704,GO:0071840,GO:0072521,GO:0098796,GO:0098798,GO:0098800,GO:0098803,GO:1901135,GO:1901360,GO:1901564,GO:1902494,GO:1990204
EggNOG free text desc.mitochondrial electron transport, NADH to ubiquinone
EggNOG OGsKOG3458@1,KOG3458@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-25_003330.1
Exons4
Model size1787
Cds size315
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig74.13983.1prot_P-fluviatile_contig74.13983.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig74 456120..457782 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817180.9357843-UTR-P-fluviatile_contig74:454920..4553151622817180.9357843-UTR-P-fluviatile_contig74:454920..455315Porterinema fluviatile SAG_2381UTRP-fluviatile_contig74 454921..455315 +
1693571405.0967116-UTR-P-fluviatile_contig74:454920..4553151693571405.0967116-UTR-P-fluviatile_contig74:454920..455315Porterinema fluviatile SAG_2381UTRP-fluviatile_contig74 454921..455315 +
1622817180.9464676-UTR-P-fluviatile_contig74:456080..4561191622817180.9464676-UTR-P-fluviatile_contig74:456080..456119Porterinema fluviatile SAG_2381UTRP-fluviatile_contig74 456081..456119 +
1693571405.1152964-UTR-P-fluviatile_contig74:456080..4561191693571405.1152964-UTR-P-fluviatile_contig74:456080..456119Porterinema fluviatile SAG_2381UTRP-fluviatile_contig74 456081..456119 +
1622817180.9925148-UTR-P-fluviatile_contig74:457782..4588201622817180.9925148-UTR-P-fluviatile_contig74:457782..458820Porterinema fluviatile SAG_2381UTRP-fluviatile_contig74 457783..458820 +
1693571405.2977161-UTR-P-fluviatile_contig74:457782..4588201693571405.2977161-UTR-P-fluviatile_contig74:457782..458820Porterinema fluviatile SAG_2381UTRP-fluviatile_contig74 457783..458820 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817180.9585571-CDS-P-fluviatile_contig74:456119..4561891622817180.9585571-CDS-P-fluviatile_contig74:456119..456189Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 456120..456189 +
1693571405.2700236-CDS-P-fluviatile_contig74:456119..4561891693571405.2700236-CDS-P-fluviatile_contig74:456119..456189Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 456120..456189 +
1622817180.9690418-CDS-P-fluviatile_contig74:456497..4566091622817180.9690418-CDS-P-fluviatile_contig74:456497..456609Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 456498..456609 +
1693571405.280585-CDS-P-fluviatile_contig74:456497..4566091693571405.280585-CDS-P-fluviatile_contig74:456497..456609Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 456498..456609 +
1622817180.9793334-CDS-P-fluviatile_contig74:457649..4577821622817180.9793334-CDS-P-fluviatile_contig74:457649..457782Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 457650..457782 +
1693571405.2893162-CDS-P-fluviatile_contig74:457649..4577821693571405.2893162-CDS-P-fluviatile_contig74:457649..457782Porterinema fluviatile SAG_2381CDSP-fluviatile_contig74 457650..457782 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig74.13983.1

>prot_P-fluviatile_contig74.13983.1 ID=prot_P-fluviatile_contig74.13983.1|Name=mRNA_P-fluviatile_contig74.13983.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=105bp
MGDEEPSYESATRDVLLSAAKIIGEKCVNENLAFAKCKAENSDPEKCLKL
GLDVLQCNNRVLSKIGSTCPDEFEAFRSCMDKTQMNFAMCRESEKALRDA
YHKA*
back to top

mRNA from alignment at P-fluviatile_contig74:454921..458820+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig74.13983.1 ID=mRNA_P-fluviatile_contig74.13983.1|Name=mRNA_P-fluviatile_contig74.13983.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3900bp|location=Sequence derived from alignment at P-fluviatile_contig74:454921..458820+ (Porterinema fluviatile SAG_2381)
CCGGGACCCAAACCCTGCGGAGACACGGGTACATTACATCCCTCCCCGAC
CCAAGGTCGATGAGAACGAATTTGAAAACAACGACCCGGCCGGTTGGTCG
ATCGATCGTCAATCAAAGCGCAGTGAGGAGGAGCTCCGCGCAGGGAGGGA
GATCCTGCTGCTGTCGACCCGGCTGATTCGATTGCCGAGTTGCTGGTTGT
GCGTTGTTTCATCATTCGACGGCCCCGCTGAATATCCCCTGTCCGTCAGC
TGAATGCCCGTGGGGCTCATGATCACCACCATCACAAGCACCCAAGCCCT
GGTTATGAAAGGAGCATCACACGTGTGATGTAGGCAGCACTCAAAAGACG
AGTGTCATCCTTTTTTGCCAGCGTGCTTCCGGCGTTGCTCAGCAAGTGAG
CTCGAAATCCTCGTTTTCCCTCTAGTCCTGAACGCACCCTGTTGGTGGTT
GGTGGTTGATGCACCCTTGGCGAGAAAATCATGCATCACAAGGAAGGCTT
TAGTCAGTTGTCTGTCGCAGCAGAGCACTATGCAGTAGCGCAGCAGTATC
CTTCCCGCCGCGGACTCTTGCGGAGAGTTCTCCAGAGGTGGTGGGCAGCA
GTCGGATGTTTCTGCTACATGTTGGAGAGGAAGTCATTTTGTTGTACCGT
CCACCATCCTTGCGGTTTTGCAGGTATGGGCGCTCACACAAGTTACGGAG
TGGCGAAGGCCGTTTTCGGCCGCTTGCGCCAGTGTGTCTTGCAGCAGAAA
ATTGAATTAAAGCGCAGCAGCATTTCGAGCCATTCATTCGAACGTTCGTC
GGTTAGGCTCGCTGTCGGACGAGAAGCGATCACCGGACAAAGTCTCGCTC
CTTTCAGCCGGTGGGCGAATGTGTTGTGCTTACCTTAAAATATCCATTTA
TATTTTGTTCGATTTACTCCCACGTCGTCCATTGAGCGGGGTTGAGAGGG
CGGCGAACCTGGCCTTGAACGCCGTAGGTACCCAACCGCCGCGCATCCTC
TCTCTCGCACACACCCTTTCTCTCTCGCGTTGTCCCACCGCCGCCGGCAT
CCTCGCCGCATGCTTTCTTACGTCGCTTCCTCTCCACCCCTCTCCACCTC
CCTCCTCTGCTTCCCCATCCGCCGTGGAAATTTTTCGCCCTGATCGGTCC
TGTTCTTCAGCCAATAACCCAAAGCAACCGACGCCGACGAGAAGAAATCA
TGGGTGACGAGGAGCCGAGCTACGAGTCAGCGACGAGGGATGTACTGCTC
TCTGCGGCCAAGATAATAGGTAGGGACGCAGCGGGTTGCCGGATTTGTTA
CTTTTCTGGGCTATTGCAACTGCTGTTGTTTTGGCGCCGCACAAGCGAAG
CCTTCTCGTGCACAAAATCGTGTAAAACGGCTGAAAGAAGGAAGTCCGCA
GTCGAAATTGGTTGGTATTCTTTTCGATGACACGGCGATGTTGATTAGGC
TGGATTTTCTCCCAAAGCAGTCGAGTTCAATTTTCTTGCTGACGCGCCAG
GGATCGCTGAAGAGTTGTCATTCCGTGTTTAATATTTCACTGTTTTGTGC
AACTCCTTTGCCACATGACCAACCCAGGCGAGAAGTGCGTTAACGAGAAC
CTCGCTTTCGCTAAGTGCAAGGCGGAGAACTCTGACCCGGAGAAGTGCCT
GAAGCTCGGGCTGGACGTCTTGCAATGCAACAACAGAGTGTGAGTGCTGC
AGGTTTTAGAACTGCTGTGGCGGTTGTAGTAGCGCCGGGGGGCACCCTTC
AGCAGGGGGGGGATTCAATTGAAAATCTTGTCGCGCCAGATACGGACTGG
ACTGAAAACGGACGGACGAGTATGTACCAAAACACGTGACGCCGAATCCC
CAATTGGGTCAGTCCGCCTTGCGCGTCAAGGTGCCTCGAAAGAAAAAGCC
AGCTTCACCTTTTGATATGGCCGGACGATAATCCTCAACTCGCAACACTT
CGGAACACGACGGCGCAAGCCCTGAGCTTTTAGCGACGTCAACGTGCTCA
CAAGTGCAGAGAACAAGCGGGAGAGCCTAACGTTTCGAGTTGAAAGCCAT
GCCTCCCTCGTGGCGTGTAGCCGGGTATGGGGGCTGCGAGGAGCGTCATA
TCCCCCATTTTTCGAAAATTCCGCTGTCTTTGCTCCCGCGCGCTCGCAAC
ACTCACTTGCTTCGCCCGATTATGGTTCTCAAGGCAAAGTATGTTCGGAT
CGGCTTAATTTTTGTGCGGGCGTAAGCGCCCTCCCGACTAGACAATCCCA
CTCCCGGTCGGGCCTTGGGGGCCTCAAATATCGATATCGGAGGCAGGTTC
ATTGCTGTCGCGTTGACGATTCTATTTCACACTTCAAAACGTGATATTCG
ATCGGCTCTCATGGCTGGCAAACTTTTCTTCCGTCAATCTCGCTGGCGAA
CGACATCTAGGAAAACGTGTGCGTGCGAGCTAGCGTCGAAGCGTCGTTGG
GGGAGGCGAAGCGCGTCTAATTCCTTGATGTTCCGTATTTGAAACGTGTT
GTTTGGGTTATATCCGGCGCCTACTAGCATGACGTATCTCAAAATCTCAG
GGTCTGGGTCAGGATCTCCTCCGCAGAATCACGTATCCAGAGGTCTCGGC
ATGTTCATTTCCGAGGAATCAGTGTAACTGTTTTGACGCTTGCCTCCTCC
CTCTCTCGCTCCCCCCCCCCGCCCACTACACCTTCAACCGTGCCGACTCC
CTCGTTTCTGTGCTTTCCCGTAATTTCAGGCTGTCAAAGATTGGGAGTAC
GTGTCCGGACGAGTTCGAGGCGTTCCGTAGTTGCATGGACAAGACACAAA
TGAATTTTGCTATGTGCCGGGAAAGCGAGAAGGCTCTCAGAGACGCATAC
CACAAGGCGTAGGCTGGGATACTCTCGAAGGCTATCTAGTCGCAAGCGGG
CAGCGATCAAGAGCCGGGCGAATCAGGAGGAGACGAAGGGGGCGGGCTTC
AGCGAAAATGAAACGACCGCCCCGTTTATTGGTATATCGGCAAAGAGGTT
GACGTGACAAGCTGTTGCGGTTATAAATTAATTTCTCGTTTCGCGTGGGG
GTTTGGATTAGGGAAAGGGGATGGATAGCGTGTCGTGACAGCTACGTTTC
GTACGAGTCTTTTCCAAACGAGCGTGGTGGTGCCGCTTGTAGAGGGGGCT
GATGGGCAGCCGGGGCTGCGGGCAAAGCGTTTCCTCTGCGTCAATCTTCC
GGACAAGCATGAGGGGCGGCAGCTCGCCGATTATCTTGTCGCGAGAAGTA
AGTTCCTTTGCCGAAGGTTCGCCCGATGGCGAATTCCTTACGGCCTCGTG
GGCAGCCTCTGACAGAGTGTACGAGCCTCGCCATTTTTGCAGGCTGCTGG
TTTATGTGAATACCGCTATTGAACTACCCGTTGCGGTAGTATCGTTTTTA
GAACCACGTTTGGGTCAGAACAGGTTTTAGATATTTTGGTGGGCCAGCAG
CGACTAGCCCGTTGCTGGGTTCGCAACCCAGAGTGCCTTCGAGGCTCCGC
ATTTTCAGCTGCCTGTTGTGCTGCACGATTCTTGTGTACTCTTGACTGAC
TTGTCCGAGGGCTACGCACTGATGCTAAGCTCTGAGTCGGGCGTTCAAAT
CGTCGGCTGCGATCGTTTGTGCTTCTCTTCGTCCTCGTAAACAAACCGAC
GGCATGGCACACACGACCATCGACCGACTCTCAGTATCATAAACAGTATC
ACATTCAAATCACGTCGCAAGCTAAACAAGTCGAGGGGGCGCGTGTCTCG
TCATTAGATCGAGAGGTTAGCGGATTGAGGTCCACTGGCTGACGCGGGCA
AGCTCAGCACTTGGTTATCCACAAAAACAAGAAATGGGGGTGTTCGCATG
TGTCACGGTAGTGGAGGAATCTGTTGAAGGACGAAGAGCATGGAAACGTT
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig74:454921..458820+

>mRNA_P-fluviatile_contig74.13983.1 ID=mRNA_P-fluviatile_contig74.13983.1|Name=mRNA_P-fluviatile_contig74.13983.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=630bp|location=Sequence derived from alignment at P-fluviatile_contig74:454921..458820+ (Porterinema fluviatile SAG_2381)
ATGGGTGACGAGGAGCCGAGCTACGAGTCAGCGACGAGGGATGTACTGCT
CTCTGCGGCCAAGATAATAGATGGGTGACGAGGAGCCGAGCTACGAGTCA
GCGACGAGGGATGTACTGCTCTCTGCGGCCAAGATAATAGGCGAGAAGTG
CGTTAACGAGAACCTCGCTTTCGCTAAGTGCAAGGCGGAGAACTCTGACC
CGGAGAAGTGCCTGAAGCTCGGGCTGGACGTCTTGCAATGCAACAACAGA
GTGCGAGAAGTGCGTTAACGAGAACCTCGCTTTCGCTAAGTGCAAGGCGG
AGAACTCTGACCCGGAGAAGTGCCTGAAGCTCGGGCTGGACGTCTTGCAA
TGCAACAACAGAGTGCTGTCAAAGATTGGGAGTACGTGTCCGGACGAGTT
CGAGGCGTTCCGTAGTTGCATGGACAAGACACAAATGAATTTTGCTATGT
GCCGGGAAAGCGAGAAGGCTCTCAGAGACGCATACCACAAGGCGTAGGCT
GTCAAAGATTGGGAGTACGTGTCCGGACGAGTTCGAGGCGTTCCGTAGTT
GCATGGACAAGACACAAATGAATTTTGCTATGTGCCGGGAAAGCGAGAAG
GCTCTCAGAGACGCATACCACAAGGCGTAG
back to top