mRNA_P-fluviatile_contig73.13923.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig73.13923.1
Unique NamemRNA_P-fluviatile_contig73.13923.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig73.13923.1 vs. uniprot
Match: D8LRI6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRI6_ECTSI)

HSP 1 Score: 395 bits (1014), Expect = 2.450e-128
Identity = 225/382 (58.90%), Postives = 267/382 (69.90%), Query Frame = 1 
Query:  238 ILGLTIAALPAR-SLLSPSMSTQIWRSQAESCSAKRLWCARFLSRRPHVSPTMRCTEQSTSRRARDSSGD---RATWGLSLSSWVAGAASFSSTALHSSTSAGMGAWXXXXXXXXXXXXKN----GTVGGAEAGGAMDEGGDSDGPVDARVCTSSSR-KADTPFPPAEMGLGLLAPKTSAPFAPWVWLSAVWGLYAVWLRRSPLLTKALTSGALALGGDMAAQYFEFQQQTGSGRKGPFLKDTRRLLAVAIDSILITGPALHALYGLLERVIPTAAGGFAPATWHLVIDTFVFDPMFITSFFCVTGMLESRSLKRDVLPALRREFWPTVHGSWVVSLVFCPLQFVTFRYLPLEFRVLSVNVCDIVWTSVLSYFSHKAPPEEG 1356
            +L + +  LPA  SLL P            +C   R W    + R   V+P MRC  +  + RA  ++ +   +A+WG+ +SSWVAGA SFS +A+H+ST  G+GAW    XXXXXXXX      GT G     GAM EG D+ G  D   C++  R + +      +M  G   PK SA F PWVWLSA+WG+YA WLRRSPL+ KA+TSG L L GDMAAQ+FEFQQ+  SGR+GPFLK+ RRL AVAIDSILITGPALHALYGLLE +IPT  GGF PA  H+VIDTFVFDPMF+ SFFCVTGMLESR L++ +LPALRREFWP V GSW+VSL+FCPLQF TFRYLPLEFRVLSVN CDI WTSV+SYFSHKA P EG
Sbjct:   12 LLSIMVVLLPATWSLLMPP-----------TCFPSRFW----VPRHAQVAPKMRCQGECGTTRAATAAANASRQASWGVGVSSWVAGATSFSRSAIHASTPEGVGAWWNGSXXXXXXXXXXXXXXGTDGXXXXXGAMGEGDDAKGASDMNACSTQHRDRGERASSTVDMSGG--EPKKSASFGPWVWLSAMWGMYAAWLRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNNRRLTAVAIDSILITGPALHALYGLLECLIPTVGGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRPLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSHKAVPAEG 376
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BLAST of mRNA_P-fluviatile_contig73.13923.1 vs. uniprot
Match: A0A6H5JK43_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK43_9PHAE)

HSP 1 Score: 395 bits (1014), Expect = 3.210e-128
Identity = 234/382 (61.26%), Postives = 268/382 (70.16%), Query Frame = 1 
Query:  238 ILGLTIAALPAR-SLLSPSMSTQIWRSQAESCSAKRLWCARFLSRRPHVSPTMRCTEQ--STSRRARDSSGDR-ATWGLSLSSWVAGAASFSSTALHSSTSAGMGAWXXXXXXXXXXXXK----NGTVGGAEAGGAMDEGGDSDGPVDARVCTSSSR-KADTPFPPAEMGLGLLAPKTSAPFAPWVWLSAVWGLYAVWLRRSPLLTKALTSGALALGGDMAAQYFEFQQQTGSGRKGPFLKDTRRLLAVAIDSILITGPALHALYGLLERVIPTAAGGFAPATWHLVIDTFVFDPMFITSFFCVTGMLESRSLKRDVLPALRREFWPTVHGSWVVSLVFCPLQFVTFRYLPLEFRVLSVNVCDIVWTSVLSYFSHKAPPEEG 1356
            IL + +  LPA  SLL P  S              R W    + R P V+P MRC  Q  +T   A  ++  R A+WG+ +SSWVA A  FS +ALH+ST  G+GAW   XXXXXXXXX     NGT G      AM EG D     D   C++  R + +   P  EM  G  A K SA F PWVWLSA+WG+YA WLRRSPL+ KA+TSG L L GDMAAQ+FEFQQ+  SGR+GPFLK+TRRL AVAIDSILITGPALHALYGLLE +IPTAAGGF PA  H+VIDTFVFDPMF+ SFFCVTGMLESRSL++ +LPALRREFWP V GSW+VSL+FCPLQF TFRYLPLEFRVLSVN CDI WTSV+SYFSHKA P EG
Sbjct:   12 ILSIIVVLLPAAWSLLMPRASFP-----------SRFW----VPRHPQVAPKMRCHGQCGTTPATAPVANASREASWGVGVSSWVAEATYFSRSALHASTPEGIGAWWNGXXXXXXXXXXXXXXNGTDGXXXXXXAMGEGDDGKRASDMNACSTQHRDRGEGASPTVEMSGG--ASKKSARFGPWVWLSAMWGMYAAWLRRSPLVAKAVTSGVLGLSGDMAAQFFEFQQKAESGRRGPFLKNTRRLTAVAIDSILITGPALHALYGLLECLIPTAAGGFVPAALHVVIDTFVFDPMFVASFFCVTGMLESRSLRKSILPALRREFWPAVQGSWLVSLLFCPLQFATFRYLPLEFRVLSVNACDIAWTSVMSYFSHKAVPTEG 376
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BLAST of mRNA_P-fluviatile_contig73.13923.1 vs. uniprot
Match: A0A7S3XMM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMM5_HETAK)

HSP 1 Score: 183 bits (465), Expect = 5.810e-50
Identity = 90/189 (47.62%), Postives = 121/189 (64.02%), Query Frame = 1 
Query:  790 LYAVWLRRSPLLTKALTSGALALGGDMAAQYFEFQQQTGSGR--KGPFLKDTRRLLAVAIDSILITGPALHALYGLLERVIPTAAGGFAPATWHLVIDTFVFDPMFITSFFCVTGMLESRSLKRDVLPALRREFWPTVHGSWVVSLVFCPLQFVTFRYLPLEFRVLSVNVCDIVWTSVLSYFSHKAPPE 1350
            LY+  L+ +P+LTKAL++  +A  GD A Q +E  ++T +       F+ D RR LAV +D I ITGP LH  Y LLE ++PT  GG  PA  H+  DTF+ DP+F+ +FF  TG+ E R L  D LP LRREF   + GSW VS V  P+QF +FRY+P+ +RVL VN  D+ WT+ +S+FSHK   E
Sbjct:   23 LYSSMLKNAPMLTKALSAAGIAASGDFATQIWEHWRETSNQGILVDKFILDRRRQLAVMMDGIFITGPILHLAYELLEHLVPTEGGGALPAVLHVAADTFLLDPLFVCTFFLTTGLFERRPLWADTLPRLRREFPAALRGSWSVSAVCLPVQFASFRYVPVRYRVLLVNCIDLAWTATMSFFSHKESAE 211
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BLAST of mRNA_P-fluviatile_contig73.13923.1 vs. uniprot
Match: W7TTT3_9STRA (Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TTT3_9STRA)

HSP 1 Score: 183 bits (464), Expect = 4.350e-48
Identity = 89/191 (46.60%), Postives = 126/191 (65.97%), Query Frame = 1 
Query:  778 AVWGLYAVWLRRSPLLTKALTSGALALGGDMAAQYFEFQQQTGSGRKG----PFLKDTRRLLAVAIDSILITGPALHALYGLLERVIPTAAGGFAPATWHLVIDTFVFDPMFITSFFCVTGMLESRSLKRDVLPALRREFWPTVHGSWVVSLVFCPLQFVTFRYLPLEFRVLSVNVCDIVWTSVLSYFSHK 1338
            ++WG YA  L   P+LTKA+T+G +AL GD+ AQ FE++       KG    PF  +  R LAV I+ ++ITGP LH LY  LE  +P A  GF  A  H+ +D F+FDP+F+  FF + G++E + L RD+ P ++RE+W  + G W VS++F PL+F TFR LPL  RVL VN+ D+VWT+V+S+F H+
Sbjct:  154 SLWGQYAELLESKPVLTKAITAGLIALFGDLLAQVFEYKLTCRRLAKGEEPAPFHLNFLRCLAVTIEGVVITGPGLHYLYTALESWMP-AQRGFLAAFTHVAVDEFIFDPLFVLCFFFLCGLIEGKHLSRDIFPQVQREYWSALKGGWGVSIMFLPLEFATFRCLPLRLRVLVVNLTDVVWTAVVSFFGHR 343
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BLAST of mRNA_P-fluviatile_contig73.13923.1 vs. uniprot
Match: A0A836CPL7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPL7_9STRA)

HSP 1 Score: 172 bits (437), Expect = 1.030e-46
Identity = 77/126 (61.11%), Postives = 99/126 (78.57%), Query Frame = 1 
Query:  979 TGPALHALYGLLERVIPTAAGGFAPATWHLVIDTFVFDPMFITSFFCVTGMLESRSLKRDVLPALRREFWPTVHGSWVVSLVFCPLQFVTFRYLPLEFRVLSVNVCDIVWTSVLSYFSHKAPPEEG 1356
            TGP LH LYGLLE  IPT AGG  PA  H+++DTF+FDP+F+ +FF  T + E +S+KR+V+P L RE+WP V GSW VS++F PLQ+  FRYLPL+ RVLS+NVCD+ WT+VLS+FSHK P E+G
Sbjct:    1 TGPGLHYLYGLLESHIPTTAGGLIPAALHVLLDTFLFDPVFVGTFFLTTALFEGKSMKREVVPQLEREYWPAVVGSWGVSVLFWPLQWACFRYLPLQLRVLSINVCDVAWTAVLSFFSHK-PDEDG 125
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BLAST of mRNA_P-fluviatile_contig73.13923.1 vs. uniprot
Match: A0A836CK90_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK90_9STRA)

HSP 1 Score: 170 bits (430), Expect = 2.040e-45
Identity = 74/126 (58.73%), Postives = 95/126 (75.40%), Query Frame = 1 
Query:  961 IDSILITGPALHALYGLLERVIPTAAGGFAPATWHLVIDTFVFDPMFITSFFCVTGMLESRSLKRDVLPALRREFWPTVHGSWVVSLVFCPLQFVTFRYLPLEFRVLSVNVCDIVWTSVLSYFSHK 1338
            ID + ITGP LH LYGLLE  IPT AGG  PA  H+++DTF+FDP+F+ SFF  T + E RSL+RDV P L RE+WP + GSW VS++F P+Q+  FRYLPL+ RV S+N+CD+ WT+ LSY SH+
Sbjct:    2 IDGVCITGPGLHFLYGLLESHIPTTAGGALPAAAHVLLDTFLFDPVFVCSFFFTTALFEGRSLRRDVAPRLAREYWPALRGSWGVSVLFWPVQWAAFRYLPLQLRVASINLCDVAWTAALSYASHR 127
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BLAST of mRNA_P-fluviatile_contig73.13923.1 vs. uniprot
Match: A0A6U1B1H0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A6U1B1H0_9STRA)

HSP 1 Score: 144 bits (364), Expect = 2.400e-35
Identity = 76/183 (41.53%), Postives = 112/183 (61.20%), Query Frame = 1 
Query:  787 GLYAVWLRRSPLLTKALTSGALALGGDMAAQYFEFQQQTGSGRKGPFLKDTRRLLAVAIDSILITGPALHALYGLLERVIPTAAGGFAPATWHLVIDTFVFDPMFITSFFCVTGMLESRSLKRDVLPALRREFWPTVHGSWVVSLVFCPLQFVTFRYLPLEFRVLSVNVCDIVWTSVLSYFSH 1335
            G Y   L  +P+ TKA+++G +   GDM AQ  E  ++TG     PF  D  R  A  +D +L+TGP+LH  Y LLERVIP+  G        + +D  +FDP+ I +FFC T ++E    ++D++  LR ++W T  G + VS    P+QF++FRY+P++ RVL VN+CD+ WTSV+S  SH
Sbjct:   69 GWYLALLSSAPIRTKAVSTGCIECLGDMIAQTAE-ARRTGL----PF--DRVRSFACFVDGLLVTGPSLHYGYALLERVIPSVGGPVWATLIQITVDELIFDPIDIATFFCTTSLIE----RKDLVQRLRNDYWSTFWGGFGVSFACTPIQFISFRYMPVKTRVLVVNLCDLAWTSVVSVLSH 240
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BLAST of mRNA_P-fluviatile_contig73.13923.1 vs. uniprot
Match: A0A1Z5JHC7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JHC7_FISSO)

HSP 1 Score: 134 bits (338), Expect = 1.830e-31
Identity = 74/195 (37.95%), Postives = 112/195 (57.44%), Query Frame = 1 
Query:  772 LSAVWGLYAVWLRRSPLLTKALTSGALALGGDMAAQYFEFQQQTGSGRKGPFLKDTRRLLAVAIDSILITGPALHALYGLLERVIPTAAG-GFAPATWHLVIDTFVFDPMFITSFFCVTGMLESRSLKRDVLPALRREFWPTVHGSWVVSLVFCPLQFVTFRYLPLEFRVLSVNVCDIVWTSVLSYFSHKAPPEE 1353
            L A+   Y +WL   PLLTK++TS  +   GD  AQ +E             +   RR LA  ++ +L +GP +H  Y L E ++P     GFA    H+++D+ + D +F+TS F +TG+LE  S K+ +    +R+   T+  SW+ SL   P++ V FRYLP+ +RVL+VNV DIVW +V+S+ SHK   +E
Sbjct:   83 LGALLQTYTLWLTTQPLLTKSITSAVMGCVGDAVAQRWEHHP----------IYSKRRGLAAMVEGLLWSGPLMHRAYSLFEHILPVGNNMGFALI--HVLLDSLLLDSVFVTSAFWITGLLEGFSFKQ-LRQQYQRDIGGTLKASWLTSLFLLPVEVVCFRYLPVTYRVLAVNVLDIVWDTVISFMSHKTRGKE 264
[Close]
BLAST of mRNA_P-fluviatile_contig73.13923.1 vs. uniprot
Match: A0A7S2M641_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2M641_9STRA)

HSP 1 Score: 132 bits (331), Expect = 1.170e-30
Identity = 77/207 (37.20%), Postives = 115/207 (55.56%), Query Frame = 1 
Query:  775 SAVWGLYAVWLRRSPLLTKALTSGALALGGDMAAQYFEFQQQ-------TGSGRK--------GPFLKDTRRLLAVAIDSILITGPALHALYGLLERVIPTAAGGFA-----PATWHLVIDTFVFDPMFITSFFCVTGMLESRSLKRDVLPALRREFWPTVHGSWVVSLVFCPLQFVTFRYLPLEFRVLSVNVCDIVWTSVLSYFSH 1335
            SA +  Y   L  +PLLTK +T G +A  GD  AQ+FE++ +        GS  K        G +  + RR +A  ++ +LI+ P +H  Y L E V+PT  GG A      A  H++ D  + D +F+ +    TG+LE    ++ V+P LRR + PT+  S +   +  PLQF++FR+LPL  RVLSVN  D++WT V+S+ SH
Sbjct:   72 SAFFAWYLSALDATPLLTKCVTGGLIAFVGDYGAQFFEWKSKQAPKESYNGSTTKQRSTISIHGTY--NIRRGIARFLECLLISSPLMHYGYDLFETVVPTVGGGSALYRSIAALTHVLADCVLLDAIFVMTGIVFTGLLEGHRFRQQVIPNLRRVYLPTLKASVMTCGLLAPLQFLSFRFLPLSLRVLSVNAVDLIWTGVISFVSH 276
[Close]
BLAST of mRNA_P-fluviatile_contig73.13923.1 vs. uniprot
Match: A0A7S3LFT8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFT8_9STRA)

HSP 1 Score: 129 bits (323), Expect = 1.450e-28
Identity = 77/226 (34.07%), Postives = 119/226 (52.65%), Query Frame = 1 
Query:  712 EMGLGLLAPKTSAPFAPWVWLSAVWGL--------------YAVWLRRSPLLTKALTSGALALGGDMAAQYFE-FQQQTGSGRKGPFLK-DTRRLLAVAIDSILITGPALHALYGLLERVIPTAAGGFAPATWHLVIDTFVFDPMFITSFFCVTGMLESRSLKRDVLPALRREFWPTVHGSWVVSLVFCPLQFVTFRYLPLEFRVLSVNVCDIVWTSVLSYFSHKA 1341
            ++G GL A +       WVW SA   L              Y + L  +PL+TK +T+G +   GD  AQ  E F  Q  +       K D RR L+  +    I+GP +H  Y L +RV+P    G A    H++ D+   D +F+ + + VTG +E     R V+P LR+++ PT+  SW  S+   P++FV FR+LPL +RVL+VN  D++W  V+S+ +H++
Sbjct:  138 QIGGGLQAWQCLLAALVWVWQSAAPNLLPLISQGLHASMAWYMMQLSVNPLVTKGITAGVIGSLGDFLAQSLENFLHQRKNNAPVVHSKYDPRRGLSTLLYGFFISGPLMHFAYDLFDRVLPIHGNGAALV--HVLADSIFLDAIFVAATYIVTGRMEGYKF-RQVMPQLRKDYLPTLKASWATSIFLMPVEFVCFRFLPLNYRVLAVNFIDLIWDGVISFMAHRS 360
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig73.13923.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRI6_ECTSI2.450e-12858.90Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JK43_9PHAE3.210e-12861.26Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XMM5_HETAK5.810e-5047.62Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
W7TTT3_9STRA4.350e-4846.60Mpv17/PMP22 n=2 Tax=Monodopsidaceae TaxID=425072 R... [more]
A0A836CPL7_9STRA1.030e-4661.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CK90_9STRA2.040e-4558.73Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U1B1H0_9STRA2.400e-3541.53Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A1Z5JHC7_FISSO1.830e-3137.95Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A7S2M641_9STRA1.170e-3037.20Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A7S3LFT8_9STRA1.450e-2834.07Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig73contigP-fluviatile_contig73:156540..161962 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score401.7
Seed ortholog evalue4.3e-109
Seed eggNOG ortholog2880.D8LRI6
KEGG koko:K13348
KEGG Pathwayko04146,map04146
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0044424,GO:0044464
EggNOG free text desc.Belongs to the peroxisomal membrane protein PXMP2 4 family
EggNOG OGsKOG1944@1,KOG1944@2759
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionMpv17/PMP22
Ec32 orthologEc-18_004680.1
Exons5
Model size2174
Cds size1317
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817170.899179-UTR-P-fluviatile_contig73:156539..1570091622817170.899179-UTR-P-fluviatile_contig73:156539..157009Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 156540..157009 -
1693571358.0296438-UTR-P-fluviatile_contig73:156539..1570091693571358.0296438-UTR-P-fluviatile_contig73:156539..157009Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 156540..157009 -
1622817170.9102228-UTR-P-fluviatile_contig73:157078..1572521622817170.9102228-UTR-P-fluviatile_contig73:157078..157252Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 157079..157252 -
1693571358.048137-UTR-P-fluviatile_contig73:157078..1572521693571358.048137-UTR-P-fluviatile_contig73:157078..157252Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 157079..157252 -
1622817170.979295-UTR-P-fluviatile_contig73:161749..1619621622817170.979295-UTR-P-fluviatile_contig73:161749..161962Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 161750..161962 -
1693571358.102317-UTR-P-fluviatile_contig73:161749..1619621693571358.102317-UTR-P-fluviatile_contig73:161749..161962Porterinema fluviatile SAG_2381UTRP-fluviatile_contig73 161750..161962 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817170.9232345-CDS-P-fluviatile_contig73:157252..1576041622817170.9232345-CDS-P-fluviatile_contig73:157252..157604Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 157253..157604 -
1693571358.06155-CDS-P-fluviatile_contig73:157252..1576041693571358.06155-CDS-P-fluviatile_contig73:157252..157604Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 157253..157604 -
1622817170.9435277-CDS-P-fluviatile_contig73:158147..1583921622817170.9435277-CDS-P-fluviatile_contig73:158147..158392Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 158148..158392 -
1693571358.0701745-CDS-P-fluviatile_contig73:158147..1583921693571358.0701745-CDS-P-fluviatile_contig73:158147..158392Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 158148..158392 -
1622817170.9572322-CDS-P-fluviatile_contig73:158999..1595641622817170.9572322-CDS-P-fluviatile_contig73:158999..159564Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 159000..159564 -
1693571358.0797863-CDS-P-fluviatile_contig73:158999..1595641693571358.0797863-CDS-P-fluviatile_contig73:158999..159564Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 159000..159564 -
1622817170.9686103-CDS-P-fluviatile_contig73:161594..1617491622817170.9686103-CDS-P-fluviatile_contig73:161594..161749Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 161595..161749 -
1693571358.0900686-CDS-P-fluviatile_contig73:161594..1617491693571358.0900686-CDS-P-fluviatile_contig73:161594..161749Porterinema fluviatile SAG_2381CDSP-fluviatile_contig73 161595..161749 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig73.13923.1prot_P-fluviatile_contig73.13923.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig73 157253..161749 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig73.13923.1

>prot_P-fluviatile_contig73.13923.1 ID=prot_P-fluviatile_contig73.13923.1|Name=mRNA_P-fluviatile_contig73.13923.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=439bp
MRIMRAPAILGLTIAALPARSLLSPSMSTQIWRSQAESCSAKRLWCARFL
SRRPHVSPTMRCTEQSTSRRARDSSGDRATWGLSLSSWVAGAASFSSTAL
HSSTSAGMGAWWNGGGALGGGGGKNGTVGGAEAGGAMDEGGDSDGPVDAR
VCTSSSRKADTPFPPAEMGLGLLAPKTSAPFAPWVWLSAVWGLYAVWLRR
SPLLTKALTSGALALGGDMAAQYFEFQQQTGSGRKGPFLKDTRRLLAVAI
DSILITGPALHALYGLLERVIPTAAGGFAPATWHLVIDTFVFDPMFITSF
FCVTGMLESRSLKRDVLPALRREFWPTVHGSWVVSLVFCPLQFVTFRYLP
LEFRVLSVNVCDIVWTSVLSYFSHKAPPEEGDSVPIKRGSGKGTSKAAKG
TAANVAGGRNLKARHFYGDSGKGRRSDCASERLVRASV*
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mRNA from alignment at P-fluviatile_contig73:156540..161962-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig73.13923.1 ID=mRNA_P-fluviatile_contig73.13923.1|Name=mRNA_P-fluviatile_contig73.13923.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5423bp|location=Sequence derived from alignment at P-fluviatile_contig73:156540..161962- (Porterinema fluviatile SAG_2381)
CAGCGAAGCTTACCATCGACACTCAAAAGCATCCTCTATCTCTCTCGGCC
TCCCACGCCGAAGTGCGTTGATTGCAGGTCTCTCAGAGGAAAAAAACTTC
TTGTACTCCGGAGAGCGTTCAGCAACAGCCTGAGCGCGCTACGCAGCAGC
TACGCGTTTGCACTGCGGTGGCCGCTCCACGTGTGTCGAGACACACCCAC
CCACCCAGCGCACATGCGGATCATGAGGGCGCCTGCGATACTGGGGCTCA
CGATAGCAGCACTACCTGCCCGGAGCCTCCTATCCCCGTCGATGTCGACT
CAGATATGGCGAAGCCAGGCGGAAAGCTGTTCTGCCAAGCGGCTATGGTG
CGCGCGTTTCCTTTCAAGGTGAGTTTGTGAAATGTTTCACCTGGGGTTCC
TTCACGCTGACTCTCCTCGACTCGAATAAAAGCTACCGGTCAACACCGCA
TTCGTTCACGACAGTAAAGAATTGTAGCGCCCTGCACCAAAAGCACGGTA
CTAAACTATGACCATGAGCATCAGTCGCGGTAATATGCTACGTGCTCGGC
AGGGTGGCAGGGTGAACTTCGCTGCAATTCACGTTTCCCATTTTTCATAA
TCTCGGATTGTCTTGGATCTCACCCGATAGCGCCGACCTCGTTCTCCGTT
TCGCTATACTAACCCGGTGACTACCGTAGGTCGCATAAGATCTCACATCC
CCTGGATCGGTTTTTGAAGCTCGATATCTCGACAGCGAGGAGTTACCTAG
CATCGAACGATGCGTCACCAAAGCTCTCGACAGCTTCTCTCGAAAGCCGC
TACGTTTGACGAAACTACCTCTTCTACCTCGGAGATATTGTTTTTTTTTA
TCTCATCTGTTTTGTTCGAATGGCGCCTTGCCACCCGGGGCATCTTGCCT
GAACATCCGAACCGTGTTCGCACAGAAAGTTCCTCTCCCTAAGGCCCCCA
CTCGCTTCCTCCTGCGGTACTGACTGAAAGTTTTTTTTCGAGAAGAGTTT
CAGCCACCTCTTTCCCACTGTGTTCGCACGCACTAGTTAGGCGCCCATGC
GCCGGCAAGACCGCAAGCCCGAAATTGAGCGTCGAAAATCGATCCAGCGG
GTATGATATCTCATGCGACCTGCGCTACCATACGCATGTTCGCAACTACT
TCGGCTTGAAGATGACGCCTTAGGACTTGTGATTTAGAACCTATCGCGAC
TCTGCTGCGTCGTTGGCAAGCTTGTCGAGTATCTGCACACCTAGGACGGC
GCCGTTGTGGGTTATCTCAGTCACCGCGTTCGGACTAGGCTGCGCTGCAA
CCGACGTTGATTCGCTTGATGCACGCCCATCAATAGACGCCAGATACCCC
AGACCAGTTGAAACGCGGCGTTCGGTGAAAATCCAAGAGATTGTCGTTGT
CGCGAGGTGGCTGCAAGAGCTCGGCTCTCAACATCCTTCTTCCGGCCTGT
CACACTCCCTCGAGGGGAAGCCAGGCCGGCAATCTCCTACGTGTGTTCGG
AAGGGGTCGGCCAACATTGCCACTGCTAGTACCGGATGACTCAGAACTGC
TTGACTTTTGCCACTTGCACCCCACACAATGCGTTAGGAAAGTTGGCTCT
CGTTGGCTCTCCTTCAATCGCATTTTTTCGGCTCGTCATCGGTTGCGCCC
GTAGTTTGACTCTCGCCAGGAAATATATTCCGCACTTGATGACGATTTAG
ATGATGAGCTTGATTTGGCGAACGCCATCCTCGCAGAACGGCAGCAAGCA
ATCGCCAGATCCCACGGCAAGAACAACCAAGCTCCTCACCACTCAGAGAC
TCTTGCACTTGGACTGCCGTCAGATTTTTTATTTGCCACATGGGTCGCGT
CTGAAACGTGGAATTGAGACGAGAAAAAGGCCCAAACTTCCACAAAGTCC
CAGCAGTAGTCTAATGCAGCAGTGTCGTGTGGAGCTGCCATCGGTGTGCA
AGCTGCCCCTGACGTGTGAAAACCTCACATGAAAAAAATGAGCCTCGTGC
TCTATCTATGTGAAAGGACGTTTGCAGGGTCAACGGTGGGAGTACATCAA
CTATGCTGAGTTCCTCCGGTGGCCTTGGTTGGTACTCCTCCTGTCGGCGT
TGACGTTGGCACGAGTGCGAGTACTTTTACAACTTTGCGCAGGCATTGCT
CCCACATACGTTGCACGTGACAGCTGCAATGTACCACCGGCCGAAGCGGA
CAGGCACCGTCCATCCACGTGACGACTGCTCTCGTGACGCTCGTCATGAG
GCCTCCCTGTGCATATGAGCGCATCCGGCCTTGAATGGACTTGTCTTTCC
ATGGTCTACGAATTTCAAAAGTACCCCCCGCAACCCCCTCCCTGCTCGCC
GGTGGTTTCCTCGTTGGCGTGCCCCCCCTCTCCCCCCGTCTCGCACAGAC
GGCCGCACGTCAGCCCGACGATGCGATGCACAGAACAATCCACCAGCAGG
CGGGCTCGCGACTCCTCCGGTGACCGCGCAACGTGGGGATTAAGCCTGTC
GTCGTGGGTAGCGGGCGCGGCTTCTTTCTCGAGTACGGCGCTGCATTCGT
CCACCTCCGCTGGGATGGGAGCCTGGTGGAACGGGGGCGGCGCTCTCGGG
GGCGGGGGCGGCAAAAACGGCACCGTCGGCGGCGCGGAAGCGGGGGGTGC
GATGGACGAAGGAGGCGATAGCGATGGGCCGGTGGACGCGCGTGTGTGCA
CCAGCAGCAGCAGGAAAGCGGACACGCCTTTTCCGCCGGCCGAGATGGGT
CTGGGCCTACTCGCACCCAAGACAAGCGCCCCATTCGCTCCGTGGGTTTG
GCTCTCGGCAGTGTGGGGGTTATACGCGGTGTGGCTAAGGCGATCCCCAC
TGCTGACAAAGGCGCTGACATCGGGGGCGCTGGCTCTCGGCGGGGACATG
GCGGCGCAATATTTCGAGTTTCAGCAGCAGACCGGCAGCGGGCGGAAAGG
ACCGTTCTTGAAGGTGGGCCAGGGTAAATGAAGGTCAGCGTGGTGTTCGC
TGGAGGCGGTGCGAGAAGTCGTTGTTTTGCTCGCTTAGCTTGCGGTCGAG
GGGCTGTTGTCGCCGGTTTAAGCGTTGCTGATCCGGTTCCGCGACGGAAT
GACAAGACAAACGCTCCCACAGTTTATTTTCCTTATTTACGTCCACGTGT
GTTCCAAAAGCGACAACCTTCAGGTTGCCGCGTTGTGATTTTCGCACAGG
CGGCATGCAGGAAGTGGTGCTCGACATTGGTGTGTCAGTGTGCCCTTGCT
TTCTCAGCTGGAGTGTGAAGCTTGCATTAGGGTGCTGTCACGCATCAAGC
GTTTCCTCGTGGAGATCTGCCGATTGGGGAGAGCGAAACAGCACGGCTAT
GTCCACACCTCGGCTACAGTCTAAGAGTGGTGACTTTCTCCGGGGGGTCG
TTTTGTGACGCTGCCCTCCCCGACACGAGCAGCAGACAATCCCGGCAGGG
GATTGCTTCCATTCATCGAACCGAGTGCGAAAACAAACGATATTTTGCCT
GCGCCCTCGCTCGCATCTCTCATTTTGTGGCTCTATTCTGCTCGCACGAC
CATTGCTATGCTGCTTCCAGGACACCCGCCGGCTTCTCGCGGTGGCGATC
GACAGCATTTTGATTACGGGGCCCGCGCTCCACGCTCTCTACGGGCTGCT
GGAGCGGGTCATCCCCACAGCCGCCGGCGGCTTCGCCCCCGCCACGTGGC
ACCTGGTGATAGACACCTTTGTCTTCGACCCGATGTTCATCACCTCGTTC
TTCTGCGTCACCGGCATGCTCGAAAGTCGCTCTCTCAAGAGGGACGTCCT
TCCGGCCCTCCGGAGGTGAGATGACTGCTGGTGGCTTGACAGGATGACCT
ATGACACACGGCGCGACGAAAATCAAGAAACGAGAGCAGTGGGCGTCGAC
AATTTTGTGTTTGTCCACGCATGTTGACGGCTCTTGTTTGTTTGAAGCGA
AGGTTTCACCCCGTGCCAGCTGGGCGTTGTTTTGTGTACACTCAGAGCCC
TTACATGCTCCCCTGTGTGTCGCTGTGGCAGTTGCAGCGCGTGCCGCACT
CGTTCCGTAGGCGCCGCATTGCACAGATGCCTTGTCGGCAGTGCACTCAG
CCGAGAGCATCAGGCGGCTGGAGGCGCGGCACATTGCGCCCAAAATACAA
CGCGCTCTTAGCGCGAGTCGGACAGTCACGTGCAATTCAAATGGTTGTCG
TAGTATTTTCGGGAAATGTGGGACCACATCTATTCAACTACCCTCCAACG
TTAGGACGCAACACCAGTGGAATGTCCACCCCTTGCTCTCCAGCTGTCTT
TACCCACAAGACAACCGACGCCCCTTGTTCCGCCACGTCGACCATCTTAC
GGCTGCAGAGAATTCTGGCCAACAGTGCACGGGTCTTGGGTGGTGTCCTT
GGTGTTTTGCCCTCTCCAGTTCGTCACCTTCCGGTACCTCCCGCTGGAGT
TCCGGGTGCTGTCGGTGAACGTGTGCGATATCGTCTGGACGTCTGTGCTC
AGCTACTTCAGCCATAAGGCACCCCCGGAGGAAGGAGATTCCGTTCCGAT
TAAACGTGGTTCGGGCAAGGGGACTTCAAAGGCGGCGAAAGGGACCGCGG
CAAATGTTGCTGGTGGTCGTAATTTGAAGGCACGACATTTCTATGGTGAC
AGTGGGAAAGGAAGGAGAAGTGATTGCGCGAGTGAGCGCCTTGTCCGAGC
AAGTGTTTGAAGCGCTGCAGGGTGCTACCCTGGGTTGTGCCAGGAGGGTA
AATATTCCGAAGCTTTGTTCCACCTAGTCGTTGTCGCACACAAAAATTAC
GTGGTCCAGGGAGCCGTAGAAGGCAGTCTTCCCCGGCATGTTTCACCCGT
TCGTTTTTATGCAGGCCATGTGCCACTTGTGCTCGTTGCGCTGCGATCGC
GCCGGCACCAAAGCGAGATTCGCCGCCTGAGTACCTGTAGAACCGCAAAC
GAGTTTTTCTCGTTTTTTTTTTTTATTTGCTCCGTTACGTTCAAGTTTGT
TTTGGTTTGATTTGGTTTGCTTTGTGTTGTTCCGGCGTTCCTGGATTCGT
ACCAGGATTGTGATCCTACGTGCTTTTAGATCTTTCCCGGCGTGGTTTCC
CCCGACAATTGCACAGATTGGAGGCAGCAGGAAAGAGAGTTTTGGCATCT
GGAGTTTTGCTGATTGTTGAGAGGCATTCTGCTCGAAAGGTGCGTTTTGA
TCGCGATCGTGCGCTACTGTCCACTCTCTTTCGATTTGATTGGTTGTTTT
TGAGAAAATCATGGATGGGGATGTGTGAGGTAGCGTTAGTACCCCTTCGA
GTCTACAGGTGGTTTCAACAGAGGTTGTCTAGGAGCGAAGCGTGAACTCT
CCCGTAGGTTGTCAGGCACCTGTAACTGCCGGGCTGGCAGTTCAGCTGGA
TTACGAAGGGGACTTCATGTACA
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Coding sequence (CDS) from alignment at P-fluviatile_contig73:156540..161962-

>mRNA_P-fluviatile_contig73.13923.1 ID=mRNA_P-fluviatile_contig73.13923.1|Name=mRNA_P-fluviatile_contig73.13923.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2634bp|location=Sequence derived from alignment at P-fluviatile_contig73:156540..161962- (Porterinema fluviatile SAG_2381)
ATGCGGATCATGAGGGCGCCTGCGATACTGGGGCTCACGATAGCAGCACT
ACCTGCCCGGAGCCTCCTATCCCCGTCGATGTCGACTCAGATATGGCGAA
GCCAGGCGGAAAGCTGTTCTGCCAAGCGGCTATGGTGCGCGCGTTTCCTT
TCAAGATGCGGATCATGAGGGCGCCTGCGATACTGGGGCTCACGATAGCA
GCACTACCTGCCCGGAGCCTCCTATCCCCGTCGATGTCGACTCAGATATG
GCGAAGCCAGGCGGAAAGCTGTTCTGCCAAGCGGCTATGGTGCGCGCGTT
TCCTTTCAAGACGGCCGCACGTCAGCCCGACGATGCGATGCACAGAACAA
TCCACCAGCAGGCGGGCTCGCGACTCCTCCGGTGACCGCGCAACGTGGGG
ATTAAGCCTGTCGTCGTGGGTAGCGGGCGCGGCTTCTTTCTCGAGTACGG
CGCTGCATTCGTCCACCTCCGCTGGGATGGGAGCCTGGTGGAACGGGGGC
GGCGCTCTCGGGGGCGGGGGCGGCAAAAACGGCACCGTCGGCGGCGCGGA
AGCGGGGGGTGCGATGGACGAAGGAGGCGATAGCGATGGGCCGGTGGACG
CGCGTGTGTGCACCAGCAGCAGCAGGAAAGCGGACACGCCTTTTCCGCCG
GCCGAGATGGGTCTGGGCCTACTCGCACCCAAGACAAGCGCCCCATTCGC
TCCGTGGGTTTGGCTCTCGGCAGTGTGGGGGTTATACGCGGTGTGGCTAA
GGCGATCCCCACTGCTGACAAAGGCGCTGACATCGGGGGCGCTGGCTCTC
GGCGGGGACATGGCGGCGCAATATTTCGAGTTTCAGCAGCAGACCGGCAG
CGGGCGGAAAGGACCGTTCTTGAAGACGGCCGCACGTCAGCCCGACGATG
CGATGCACAGAACAATCCACCAGCAGGCGGGCTCGCGACTCCTCCGGTGA
CCGCGCAACGTGGGGATTAAGCCTGTCGTCGTGGGTAGCGGGCGCGGCTT
CTTTCTCGAGTACGGCGCTGCATTCGTCCACCTCCGCTGGGATGGGAGCC
TGGTGGAACGGGGGCGGCGCTCTCGGGGGCGGGGGCGGCAAAAACGGCAC
CGTCGGCGGCGCGGAAGCGGGGGGTGCGATGGACGAAGGAGGCGATAGCG
ATGGGCCGGTGGACGCGCGTGTGTGCACCAGCAGCAGCAGGAAAGCGGAC
ACGCCTTTTCCGCCGGCCGAGATGGGTCTGGGCCTACTCGCACCCAAGAC
AAGCGCCCCATTCGCTCCGTGGGTTTGGCTCTCGGCAGTGTGGGGGTTAT
ACGCGGTGTGGCTAAGGCGATCCCCACTGCTGACAAAGGCGCTGACATCG
GGGGCGCTGGCTCTCGGCGGGGACATGGCGGCGCAATATTTCGAGTTTCA
GCAGCAGACCGGCAGCGGGCGGAAAGGACCGTTCTTGAAGGACACCCGCC
GGCTTCTCGCGGTGGCGATCGACAGCATTTTGATTACGGGGCCCGCGCTC
CACGCTCTCTACGGGCTGCTGGAGCGGGTCATCCCCACAGCCGCCGGCGG
CTTCGCCCCCGCCACGTGGCACCTGGTGATAGACACCTTTGTCTTCGACC
CGATGTTCATCACCTCGTTCTTCTGCGTCACCGGCATGCTCGAAAGTCGC
TCTCTCAAGAGGGACGTCCTTCCGGCCCTCCGGAGGACACCCGCCGGCTT
CTCGCGGTGGCGATCGACAGCATTTTGATTACGGGGCCCGCGCTCCACGC
TCTCTACGGGCTGCTGGAGCGGGTCATCCCCACAGCCGCCGGCGGCTTCG
CCCCCGCCACGTGGCACCTGGTGATAGACACCTTTGTCTTCGACCCGATG
TTCATCACCTCGTTCTTCTGCGTCACCGGCATGCTCGAAAGTCGCTCTCT
CAAGAGGGACGTCCTTCCGGCCCTCCGGAGAGAATTCTGGCCAACAGTGC
ACGGGTCTTGGGTGGTGTCCTTGGTGTTTTGCCCTCTCCAGTTCGTCACC
TTCCGGTACCTCCCGCTGGAGTTCCGGGTGCTGTCGGTGAACGTGTGCGA
TATCGTCTGGACGTCTGTGCTCAGCTACTTCAGCCATAAGGCACCCCCGG
AGGAAGGAGATTCCGTTCCGATTAAACGTGGTTCGGGCAAGGGGACTTCA
AAGGCGGCGAAAGGGACCGCGGCAAATGTTGCTGGTGGTCGTAATTTGAA
GGCACGACATTTCTATGGTGACAGTGGGAAAGGAAGGAGAAGTGATTGCG
CGAGTGAGCGCCTTGTCCGAGCAAGTGTTTGAAGAATTCTGGCCAACAGT
GCACGGGTCTTGGGTGGTGTCCTTGGTGTTTTGCCCTCTCCAGTTCGTCA
CCTTCCGGTACCTCCCGCTGGAGTTCCGGGTGCTGTCGGTGAACGTGTGC
GATATCGTCTGGACGTCTGTGCTCAGCTACTTCAGCCATAAGGCACCCCC
GGAGGAAGGAGATTCCGTTCCGATTAAACGTGGTTCGGGCAAGGGGACTT
CAAAGGCGGCGAAAGGGACCGCGGCAAATGTTGCTGGTGGTCGTAATTTG
AAGGCACGACATTTCTATGGTGACAGTGGGAAAGGAAGGAGAAGTGATTG
CGCGAGTGAGCGCCTTGTCCGAGCAAGTGTTTGA
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