mRNA_P-fluviatile_contig72.13893.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig72.13893.1
Unique NamemRNA_P-fluviatile_contig72.13893.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig72.13893.1 vs. uniprot
Match: D7FZG5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZG5_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 2.240e-101
Identity = 187/270 (69.26%), Postives = 209/270 (77.41%), Query Frame = 2 
Query:   14 ILRSLAEELVWKGDREDEXXXXXXEDC------LDEMDLESLGISMMDDETAEEVQEQLRREWGSMSVQNNQNAYQIDTAELQSKLSRAMEVLGCQAWDVGVVLTTDKEVSQLNRQYRGMDSSTDILSFSNHDMSDNPGVLPKVRFPAEMDLGDMYISLAYVDRQIKRDMLEQQXXXXXXXXXXXXXXXGDGAVAATSGGFTGAHVEDHEWWDSERGVSGAMSRVFDIQVRTSMLLVHGLIHLMGYDHETAEDYEAMVALEEEVLRAVFG 805
            +L +LA+ELVW+GD ++  XXXXX         ++ +DLESLGIS+MDDE AEEVQEQLRREWG+ SVQN Q  Y+IDTAELQSK+ + MEVLGCQAWDVG VLTTDKEV +LNRQYRGM +STDILSF NHDMS +PGVLPKVRFPAEMDLGDM+ISLAYVDRQIKRD  E  XXXXXXXXXXX                           DSERGVSGAMSRVFD+Q R SMLLVHGLIHL+GYDHET  DY+AMVA+EEEVLRAVFG
Sbjct:   41 LLAALADELVWEGDGDEGEXXXXXXXXXXXXAGMEGLDLESLGISIMDDEDAEEVQEQLRREWGTASVQNEQKEYEIDTAELQSKMRQTMEVLGCQAWDVGAVLTTDKEVFRLNRQYRGMSTSTDILSFPNHDMSGSPGVLPKVRFPAEMDLGDMFISLAYVDRQIKRDREEXXXXXXXXXXXXX--------------------XXXXXXXDSERGVSGAMSRVFDVQERASMLLVHGLIHLLGYDHETESDYKAMVAVEEEVLRAVFG 290
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BLAST of mRNA_P-fluviatile_contig72.13893.1 vs. uniprot
Match: A0A835Z8A0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8A0_9STRA)

HSP 1 Score: 175 bits (443), Expect = 1.530e-48
Identity = 105/242 (43.39%), Postives = 141/242 (58.26%), Query Frame = 2 
Query:  125 ISMMDDETAEEVQEQLRREWGSMSVQNNQNAYQIDTAELQSKLSRAMEVLGCQAWDVGVVLTTDKEVSQLNRQYRGMDSSTDILSFSNHDMS-----------------DNPGVLPKVRFPAEMDLGDMYISLAYVDRQIKRDMLEQQXXXXXXXXXXXXXXXGDGAVAATSGGFTGAHVEDHEWWDSERGVSGAMSRVFDIQVRTSMLLVHGLIHLMGYDHETAEDYEAMVALEEEVLRAV 799
            I +++  + EE+  +     G++ V+N Q +Y+IDT +L+  +  A ++LG   WDV + LTTDK V +LN QYRG D STDILSFS +++                  + PG L KVR P EMDLG+M +SLAYVDR I++D  EQ                 DG           +  E+H+     RGVSGAMSRVF +Q R  +L +HGL+HL+GYDHET EDYE MVA EEE+LRA+
Sbjct:   15 IEVLEIPSDEELAAECASRTGTVYVRNTQRSYKIDTQQLEQHIRAARDLLGYSNWDVSLWLTTDKTVRKLNSQYRGKDKSTDILSFSYNELQCSYRLLHGGSHSTKLQVETPGKLAKVRHPEEMDLGEMMVSLAYVDRVIQQDKAEQ-----------------DGQ----------SQEEEHD-----RGVSGAMSRVFTVQERLPLLCIHGLLHLVGYDHETDEDYEVMVAREEELLRAL 224
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BLAST of mRNA_P-fluviatile_contig72.13893.1 vs. uniprot
Match: B7FP01_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FP01_PHATC)

HSP 1 Score: 115 bits (288), Expect = 1.460e-26
Identity = 71/205 (34.63%), Postives = 108/205 (52.68%), Query Frame = 2 
Query:  185 GSMSVQNNQNAYQIDTAELQSKLSRAMEVLGCQAWDVGVVLTTDKEVSQLNRQYRGMDSSTDILSFSNHDMSDNPGVL--PKVRFPAEMDLGDMYISLAYVDRQIKRDMLEQQXXXXXXXXXXXXXXXGDGAVAATSGGFTGAHVEDHEWWDSERGVSGAMSRVFDIQVRTSMLLVHGLIHLMGYDHETAEDYEAMVALEEEVLR 793
            G + V+NNQ +  ID   L++ +++  +++G + +DV ++L  D+E+ + N + RGMD  TD+LSF   +  + PGVL  P V      ++GDM I + YV R  + D                                  A     +  D +RGVS AM+ V D + R +MLLVHG++HL+GYDH   +DY+ MVA EEE+LR
Sbjct:   16 GDIYVENNQESLNIDLERLKATIAKIRDLMGYRTYDVSLLLVDDQEMRETNEETRGMDEPTDVLSFPFTEAIE-PGVLTPPVVDIGDYYNMGDMMIDVPYVIRACQDD----------------------------------AKYSHSDLEDEDRGVSAAMAMVMDPEERINMLLVHGMLHLVGYDHIDDDDYQLMVAKEEEILR 185
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BLAST of mRNA_P-fluviatile_contig72.13893.1 vs. uniprot
Match: A0A7S1ZIF3_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1ZIF3_9STRA)

HSP 1 Score: 118 bits (295), Expect = 1.710e-26
Identity = 70/202 (34.65%), Postives = 110/202 (54.46%), Query Frame = 2 
Query:  224 IDTAELQSKLSRAMEVLGCQAWDVGVVLTTDKEVSQLNRQYRGMDSSTDILSFS-NHDMSDNPGVLPKVRFPAE--MDLGDMYISLAYVDRQIKRDMLEQQXXXXXXXXXXXXXXXGDGAVAATSGGFTGAHVEDHEWWDSE---------RGVSGAMSRVFDIQVRTSMLLVHGLIHLMGYDHETAEDYEAMVALEEEVLR 793
            ID + LQ K+S   +++G + +DV ++LT D+ ++++N   RGM+  TDILSF  ++++   PGVL    F  E   +LG+M + + Y++R+I+                                       ED E+++           RGVSGAM++V+D++ R  ML VHG++HL+GYDHET ED+E MV  EEEVL+
Sbjct:  124 IDISTLQHKVSIIRQIIGYETYDVSILLTDDELITEINNDTRGMNKPTDILSFPFDNEVIVEPGVLGDAEFDHEDFYNLGEMIVDVPYIERRIE---------------------------------------EDREYYEXXXXXXXXXXXRGVSGAMAKVYDVEERIGMLFVHGMLHLVGYDHETDEDFELMVTKEEEVLK 286
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BLAST of mRNA_P-fluviatile_contig72.13893.1 vs. uniprot
Match: A0A448ZRN4_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRN4_9STRA)

HSP 1 Score: 117 bits (294), Expect = 3.320e-26
Identity = 75/208 (36.06%), Postives = 112/208 (53.85%), Query Frame = 2 
Query:  185 GSMSVQNNQNAY-QIDTAELQSKLSRAMEVLGCQAWDVGVVLTTDKEVSQLNRQYRGMDSSTDILSFSNHDMSDNPGVL---PKVRFPAEMDLGDMYISLAYVDRQIKRDMLEQQXXXXXXXXXXXXXXXGDGAVAATSGGFTGAHVEDHEWWDSE-RGVSGAMSRVFDIQVRTSMLLVHGLIHLMGYDHETAEDYEAMVALEEEVLR 793
            G++S+ N+Q A  +ID   LQ  + R  +++G + +DV ++L  D E+ + N + RG++S TDILSF  H   DN   L   P+   P    LGDM + + YV R+ K D+L ++               GD               +D +  D + RGVSGAM+ + D + R  MLLVHG++HL+GYDH   +DY  MV  EEE+L+
Sbjct:  113 GTVSIYNDQEALKEIDEDALQRTVHRISKIIGYETYDVTLLLVDDDEMRETNLETRGINSPTDILSFPFHSREDNKAGLLKEPEFDIPDYYTLGDMVVCVPYVIRRCKEDILFRKEQAEGATNDEKKSEYGD---------------DDSDLIDDDDRGVSGAMANIDDPEKRIRMLLVHGMLHLVGYDHIEDDDYVEMVEREEELLK 305
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BLAST of mRNA_P-fluviatile_contig72.13893.1 vs. uniprot
Match: F0XVF3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVF3_AURAN)

HSP 1 Score: 115 bits (287), Expect = 3.500e-26
Identity = 76/205 (37.07%), Postives = 108/205 (52.68%), Query Frame = 2 
Query:  185 GSMSVQNNQNAYQIDTAELQSKLSRAMEVLGCQAWDVGVVLTTDKEVSQLNRQYRGMDSSTDILSFSNHDMSDNPGVLPKV---RFPAEMDLGDMYISLAYVDRQIKRDMLEQQXXXXXXXXXXXXXXXGDGAVAATSGGFTGAHVEDHEWWDSERGVSGAMSRVFDIQVRTSMLLVHGLIHLMGYDHETAEDYEAMVALEEEVL 790
            G++ ++N Q +  ID   ++S     +E L C  +DVG+ LTTD  + + N ++RGM  STDILSF  HD    PG LP         +++LGDM +S+ YV R+ ++D                             GG       DH      RGV+ AM+ V D++ R  MLLVHGL HL+ YDHET +++E MVALE+E+L
Sbjct:   37 GTVLIRNTQRSIPIDVDAVESVTRALLERLRCSEFDVGIWLTTDATIRKYNTRFRGMRKSTDILSFPFHDEL-APGALPDAVDRDDEDDLNLGDMVVSVPYVRRRAEKD-----------------------------GG------RDHA---PGRGVAAAMAPVADVEERIHMLLVHGLCHLLNYDHETDDEFEDMVALEDELL 202
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BLAST of mRNA_P-fluviatile_contig72.13893.1 vs. uniprot
Match: A0A0G4EXT6_VITBC (ACPS domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EXT6_VITBC)

HSP 1 Score: 120 bits (301), Expect = 4.410e-26
Identity = 67/204 (32.84%), Postives = 111/204 (54.41%), Query Frame = 2 
Query:  185 GSMSVQNNQNAYQIDTAELQSKLSRAMEVLGCQAWDVGVVLTTDKEVSQLNRQYRGMDSSTDILSFSNHDMSDNPGVLPKVRFPAEMDLGDMYISLAYVDRQIKRDMLEQQXXXXXXXXXXXXXXXGDGAVAATSGGFTGAHVEDH-EWWDSERGVSGAMSRVFDIQVRTSMLLVHGLIHLMGYDHETAEDYEAMVALEEEVLR 793
            G +++ N+Q    +D   L+ ++    +++G  A+D+GV L  ++ +  LNR +R  D  TDILSF   D  + PG LPKV    ++DLGD++IS  YV  +   D  E +                             A +ED+ E+  +ERGVSGAM++ F ++ R  +L++HG++HL+GYD ++  D+  MV  EE+V++
Sbjct:  145 GEITLTNSQREIALDMGLLERQIKHIRDIIGVSAFDIGVELVDNQRMQHLNRDFRAKDRPTDILSFRCFDDIE-PGSLPKVTSAEDLDLGDIFISAEYVQERCDEDRAEME-----------------------------AQLEDNGEFVSTERGVSGAMAKTFTVRERLPLLVIHGILHLLGYDDQSDSDWSMMVNREEQVIK 318
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BLAST of mRNA_P-fluviatile_contig72.13893.1 vs. uniprot
Match: A0A4D9DAX9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAX9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.110e-25
Identity = 70/222 (31.53%), Postives = 114/222 (51.35%), Query Frame = 2 
Query:  185 GSMSVQNNQNAYQIDTAELQSKLSRAMEVLGCQAWDVGVVLTTDKEVSQLNRQYRGMDSSTDILSFSNHDMSDNPGVLPKVRFPAE---MDLGDMYISLAYVDRQIKRDMLEQQXXXXXXXXXXXXXXXGDGAVAATSGGFTGAHVEDHEWWDSERGVSGAMSRVFDIQVRTSMLLVHGLIHLMGYDHETAEDYEAMVALEEEVL---RAVFGGESVAGASP 832
            G++ ++N+Q    +D   L +++   +E++G    DV + LT D+ + + N +YRG  ++TDILSF  H+  + PGV     +       DLGDM +S+ YV RQ +RD ++                                  +    W  ERG SGAM+RVF +Q R   L++HG++HL+G+DHET ++Y  MV  E+ VL   +  F   +++ A+P
Sbjct:   75 GTIQIRNSQRTIALDLDLLNTQVRAILEIVGKSDHDVSLWLTNDRSIREYNDRYRGKRTATDILSFPFHEY-EAPGVPTSESWALTGEVKDLGDMIVSVPYVQRQCQRDQVDW-------------------------------FEKGENLWSGERGASGAMARVFGVQDRLPFLVIHGVLHLLGFDHETDKEYNEMVKEEDRVLAEFKKKFASTALSEAAP 264
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BLAST of mRNA_P-fluviatile_contig72.13893.1 vs. uniprot
Match: A0A1Z5JES7_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JES7_FISSO)

HSP 1 Score: 112 bits (281), Expect = 4.410e-25
Identity = 72/205 (35.12%), Postives = 105/205 (51.22%), Query Frame = 2 
Query:  185 GSMSVQNNQ-NAYQIDTAELQSKLSRAMEVLGCQAWDVGVVLTTDKEVSQLNRQYRGMDSSTDILSFSNHDMSDNPGVL--PKVRFPAEMDLGDMYISLAYVDRQIKRDMLEQQXXXXXXXXXXXXXXXGDGAVAATSGGFTGAHVEDHEWWDSERGVSGAMSRVFDIQVRTSMLLVHGLIHLMGYDHETAEDYEAMVALEEEVL 790
            G +  QN+Q N  +ID A L   L+R    +G + + V + L  D+E+ ++N + RG+D+ TDILSF   +  + PG L  P+   P    LGD+ + + YV R+ + D    +                                        ERGVSGAM+R++D + R  MLL+HG++HL+GYDHE  EDYE MVA EEE+L
Sbjct:   51 GKILFQNDQTNVLEIDEARLLETLNRIRRHIGYETYGVSLELIGDEEMQEINLESRGVDAPTDILSFPFSEYIE-PGTLEPPQFDIPDYYQLGDLLVDVPYVMRRCQEDKEYYEQLD----------------------------XXXXXXXXXERGVSGAMARIYDAEERIHMLLIHGMLHLVGYDHEDDEDYELMVAKEEEIL 226
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BLAST of mRNA_P-fluviatile_contig72.13893.1 vs. uniprot
Match: W7UC15_9STRA (Rrna maturation factor n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UC15_9STRA)

HSP 1 Score: 115 bits (289), Expect = 9.870e-25
Identity = 70/222 (31.53%), Postives = 112/222 (50.45%), Query Frame = 2 
Query:  185 GSMSVQNNQNAYQIDTAELQSKLSRAMEVLGCQAWDVGVVLTTDKEVSQLNRQYRGMDSSTDILSFSNHDMSDNPGVLPKVRFPAE---MDLGDMYISLAYVDRQIKRDMLEQQXXXXXXXXXXXXXXXGDGAVAATSGGFTGAHVEDHEWWDSERGVSGAMSRVFDIQVRTSMLLVHGLIHLMGYDHETAEDYEAMVALEEEVL---RAVFGGESVAGASP 832
            G++ ++N+Q    +D   L +++   +E++G    DV + LT D+ + + N +YRG  ++TDILSF  H+  + PG+     +       DLGDM +S+ YV RQ +RD  +                                  +    W  ERG SGAM+RVF +Q R   L++HG++HL+G+DHET +DY  MV  E+ VL   +  F    ++ A+P
Sbjct:  211 GTIQIRNSQRTIALDLDLLHAQVRTILEIVGKSDHDVSLWLTNDRSIREYNDRYRGKRTATDILSFPFHEY-EAPGIPTSESWALTGEVKDLGDMIVSVPYVQRQCQRDQADWLE-------------------------------KGENLWSGERGASGAMARVFGVQDRLPFLVIHGVLHLLGFDHETDKDYNEMVKEEDRVLAEFKKKFASTGLSEAAP 400
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig72.13893.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FZG5_ECTSI2.240e-10169.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z8A0_9STRA1.530e-4843.39Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
B7FP01_PHATC1.460e-2634.63Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S1ZIF3_9STRA1.710e-2634.65Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448ZRN4_9STRA3.320e-2636.06Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
F0XVF3_AURAN3.500e-2637.07Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A0G4EXT6_VITBC4.410e-2632.84ACPS domain-containing protein n=1 Tax=Vitrella br... [more]
A0A4D9DAX9_9STRA1.110e-2531.53Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1Z5JES7_FISSO4.410e-2535.12Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
W7UC15_9STRA9.870e-2531.53Rrna maturation factor n=1 Tax=Nannochloropsis gad... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig72contigP-fluviatile_contig72:564167..568622 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score304.7
Seed ortholog evalue4.1e-80
Seed eggNOG ortholog2880.D7FZG5
Preferred nameYBEY
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044464
EggNOG free text desc.metalloendopeptidase activity
EggNOG OGs2R6QZ@2759,COG0319@1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionEndoribonuclease YbeY
Ec32 orthologEc-19_003220.1
Exons6
Model size1337
Cds size768
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig72.13893.1prot_P-fluviatile_contig72.13893.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig72 564633..568519 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817167.6626046-UTR-P-fluviatile_contig72:564166..5646321622817167.6626046-UTR-P-fluviatile_contig72:564166..564632Porterinema fluviatile SAG_2381UTRP-fluviatile_contig72 564167..564632 -
1693571349.7179303-UTR-P-fluviatile_contig72:564166..5646321693571349.7179303-UTR-P-fluviatile_contig72:564166..564632Porterinema fluviatile SAG_2381UTRP-fluviatile_contig72 564167..564632 -
1622817167.7335129-UTR-P-fluviatile_contig72:568519..5686221622817167.7335129-UTR-P-fluviatile_contig72:568519..568622Porterinema fluviatile SAG_2381UTRP-fluviatile_contig72 568520..568622 -
1693571350.8472857-UTR-P-fluviatile_contig72:568519..5686221693571350.8472857-UTR-P-fluviatile_contig72:568519..568622Porterinema fluviatile SAG_2381UTRP-fluviatile_contig72 568520..568622 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817167.6720717-CDS-P-fluviatile_contig72:564632..5648211622817167.6720717-CDS-P-fluviatile_contig72:564632..564821Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 564633..564821 -
1693571350.644383-CDS-P-fluviatile_contig72:564632..5648211693571350.644383-CDS-P-fluviatile_contig72:564632..564821Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 564633..564821 -
1622817167.6818035-CDS-P-fluviatile_contig72:565612..5658701622817167.6818035-CDS-P-fluviatile_contig72:565612..565870Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 565613..565870 -
1693571350.7893226-CDS-P-fluviatile_contig72:565612..5658701693571350.7893226-CDS-P-fluviatile_contig72:565612..565870Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 565613..565870 -
1622817167.692318-CDS-P-fluviatile_contig72:566339..5664201622817167.692318-CDS-P-fluviatile_contig72:566339..566420Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 566340..566420 -
1693571350.802128-CDS-P-fluviatile_contig72:566339..5664201693571350.802128-CDS-P-fluviatile_contig72:566339..566420Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 566340..566420 -
1622817167.7031872-CDS-P-fluviatile_contig72:567422..5675151622817167.7031872-CDS-P-fluviatile_contig72:567422..567515Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 567423..567515 -
1693571350.8148994-CDS-P-fluviatile_contig72:567422..5675151693571350.8148994-CDS-P-fluviatile_contig72:567422..567515Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 567423..567515 -
1622817167.7139163-CDS-P-fluviatile_contig72:568020..5681341622817167.7139163-CDS-P-fluviatile_contig72:568020..568134Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 568021..568134 -
1693571350.8251805-CDS-P-fluviatile_contig72:568020..5681341693571350.8251805-CDS-P-fluviatile_contig72:568020..568134Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 568021..568134 -
1622817167.7232573-CDS-P-fluviatile_contig72:568486..5685191622817167.7232573-CDS-P-fluviatile_contig72:568486..568519Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 568487..568519 -
1693571350.8336256-CDS-P-fluviatile_contig72:568486..5685191693571350.8336256-CDS-P-fluviatile_contig72:568486..568519Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 568487..568519 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig72.13893.1

>prot_P-fluviatile_contig72.13893.1 ID=prot_P-fluviatile_contig72.13893.1|Name=mRNA_P-fluviatile_contig72.13893.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=256bp
MDLESLGISMMDDETAEEVQEQLRREWGSMSVQNNQNAYQIDTAELQSKL
SRAMEVLGCQAWDVGVVLTTDKEVSQLNRQYRGMDSSTDILSFSNHDMSD
NPGVLPKVRFPAEMDLGDMYISLAYVDRQIKRDMLEQQAAAVAAAAAKKG
GGDGDGAVAATSGGFTGAHVEDHEWWDSERGVSGAMSRVFDIQVRTSMLL
VHGLIHLMGYDHETAEDYEAMVALEEEVLRAVFGGESVAGASPPRTNLSQ
ASSST*
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mRNA from alignment at P-fluviatile_contig72:564167..568622-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig72.13893.1 ID=mRNA_P-fluviatile_contig72.13893.1|Name=mRNA_P-fluviatile_contig72.13893.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4456bp|location=Sequence derived from alignment at P-fluviatile_contig72:564167..568622- (Porterinema fluviatile SAG_2381)
AGAGGAAGAAGACATACTGCGTTCTCTGGCGGAGGAGTTGGTCTGGAAAG
GGGACCGTGAAGATGAGGAGGATGACGACGATGGGGAGGACTGTCTGGAT
GAAATGGATCTCGAGAGCTTGGGGATTTCGATGATGGTCAGTCCTGTCCG
TGGTATTGTACCCTGTCGAGCCGTAATTTACTAAGCACAACCTGCCCTCT
CCGGTTGCATGAACCAACTCGTGCATCTCTCTCTATAGACTCTTCATCGG
AGCGATTGCTCGCTTGCCCCTTTTAGCTTACGCAGCGGATATTGGATCCA
CTTAAGTCTTCATGTACGGAGCACGAGCTTCACGGGAACGTAGCCCTTTG
TCGACAAAACGCACCGATTGCTCCCGATTTGTTTGTTTCCAGCCGAAGAA
CGCCTTTCGGTAGTAAAGCATAGGCCGTGAGACTTGGAATATCGTGTGCT
CTTGTTTTGATCCCGTTGCATGTGCTCGTGTTGGGCAGGATGACGAGACT
GCGGAGGAAGTCCAGGAGCAGCTGCGGCGTGAATGGGGATCGATGTCAGT
GCAAAACAATCAGAACGCCTACCAAATCGACACCGCTGAACTGCAGTCGA
AGGTGCGGCACAGGAAACGTGCTGTTTTTTAGTCGCGCGTTTCCCCCTCC
CGAGAGAAATTTGAAATTGCGGCGGTCGTGGTATGTATGCGATTCGCAGA
AATTGTGTCGAGATTCAGTCGAATGCCGTTGCACACGGCAGGCGATCGGG
AATTGTCGATCACCCAGCTTTGACCCATTGCATTGTTATTCATTCCGGGG
CTCGAAGTAGGATGTCACTTCCTTGCCTCCGAAGCCGCTAGGCACAGGGG
ATGACGTCGCACGGCTGAGAGCAATGCCGCCCTCTACATGTCAGGCACTG
GAGGAAGACCGCATCGTCGTGGCTCCAAAACTGGACGATCAAGTTGATCA
TGACCATGTGTTGCAGCAGAACTTTCTCGCAGGCCTCCCGCTCTATCTCC
CACGGGAACTGACTGATACGAGCCTTGAATAACAGAAGCTAACAACGTTG
ACAAACGCCCTCGTTGCCCCTTCTGCTGGTGCTGACGTGCGCGCGACGCG
GTAACAGCTCAGCCGGGCGATGGAGGTCCTTGGGTGCCAGGCGTGGGACG
TCGGGGTGGTGCTCACGACAGACAAAGAGGTGTCTCAGCTGAACCGCCAG
GTGAGACAACAAGTAGGCATGCGGCCGACAGACCTCACCCCCCCGTAAGG
CGATGAACATGGGGCGGGCGGGGGGTACTCGATTCAAGCATGCCGTAGCC
GTTAGACCATAGGCATCGGGTCCCTACCACGCCCGGACGGAGCGATTTGC
CGGGATTTCACCGGCCCAGGCTCTTGCACTCACCAAGCGCGAAGCGCTGC
GATGCATTCCGTGAGTCGCACGAAGGGTGGGCGGGATCCTACTGTGGATG
TCGGCCAATGGCTTCCCGATCTTGCACACGAATGACAGCCTCAACTGAGC
TGCAGTTTATTTGTTGGTATCATCCCAAAGCCAGCCATTGGGATGTACTA
CGGCAGGGCCTCGCAGGTGCATCATCACTTTACCATTGCGTGGTACGACC
ATGTCCCATGTAAGGAGATAAATTCTCCACCCCGCACACATGGATTTGCT
TCCACCACCATGATTACCCCCCCCAAAAAAGGAGTAGCGGTAACCCGGTT
GCCTAGCTCAGGCAGTGAGCAGCATGTTTTACAGCGCCGTCGCCAACCCG
GCGCCAACTCAGCCCCTTGCCGCGCCATCGGGCCGGTGCATCTCTTTCGA
GAGCGTCGGGGGCGGGGGGGGGGCAAAGGGGTTCATTCGTCGCTCATTTA
TGCGCGAGTGTTTGTCGACGAATGAGGTCCCAGCCGACGTGTCCGCGTGA
AACCAATTTGAAAACCAGCGGTGGAGTGCAACCGCGTACTACTCCCAAGA
TTTTTTACTGATGGTGTTTCGGTTACATTTTTCATTTTATATTTGTTACA
AGGCAAATGGTGGGCCTGTTGCGCAGACTCCGTGGCTTCATCGCGGGATG
GCGCCGGTGCGCCCTTTGCCCGGTTTGTTTCCGTTGTGGATGCTCCGGGC
GACCAAGTGAACGTACAATGTTTTGTGCGTGCCCTACACCGTCTTGCTAA
CAAAGTTCTCACGTTGATCCGATTCCGTTGCTCTGCCCGCCTGCGGCACC
AGTACCGGGGGATGGATTCGTCGACCGACATATTGTCGTTTTCCAACCAC
GACATGTCCGACAATCCCGGGGTGCTCCCAAAGGTACGTCAAACGCATTC
TCAACGCTCGCAGTGCGAAGTCTGATCGCGGAGGGGATGGTAAACATGTA
TTCTACGGACATCTTGCCCTTGTTGATGTACTTATCGCAGTCCTTTCATC
TGCGAAAAGCAATCTCCCCGTTCTTGCCACCCGCGCCGCTTAAAATTGAT
GGGGAAATGCATTCGTACGTCGTTTCTGTTGACGATCGACTCGAATGTCG
ATCACAACCCTCGCGCGACGTCGCTGCCTCGTTGGTGACTTCGGATCCGC
CACTGCATTTGAAGAGGTAACCCTATCTACAGTGGCCACTGGCCCGTGAG
GGTTCACGCAACCCATTGCGTGCGTGGTTGTCAGCGGCACGTGCAGAATG
CTGGTGTTTAGACAGGCACTGGGTTTATTCAGTTACCGCCGCGATGCCGG
GTTGACCACGGTGCTCGCTTTATTGTGTCTTGGCATCTTCTGCGAAACGC
AGGTTAGGTTTCCTGCGGAGATGGACCTGGGCGACATGTACATCTCACTT
GCCTACGTCGACCGACAGATTAAAAGGGATATGCTAGAGCAACAAGCCGC
AGCGGTGGCGGCGGCGGCGGCGAAGAAGGGTGGTGGTGATGGTGATGGTG
CTGTCGCGGCCACCTCTGGGGGCTTCACGGGGGCACATGTAGAGGACCAC
GAGTGGTGGGACAGCGAGAGGGGGGTGAGCGGGGCTATGTCCAGGGTTTT
CGACATCCAGGTGTGTAAACGAAGCAACGGTTAGGTTTGCCTTACTACCA
AGATTTTGTACCGGGGAGAAGGTGGAGGAGGCGCGAGAGTGGGACTACCC
CCAAGTATTCAGGCACATGGCCCATTTTTCTTGGCCTTTTCCGAAGGCCA
GCTCCGCGCTTGGTGCATGTGGAAGTACAGCGGGTGGGGAGAGGGGGATC
CTCTCTTGATTTGGAATTGATTCACATGGAGAAAAATTCTGCTCCGTGCT
CTATGTCCCCCATGTGGTCGATCGGTTGGCGGATGCTTGCGATGGCCGAT
GCAAAATCTCATCGCAGGGTTCTGTGGGAGTGGAGTAGATGGCGGGGTTA
GGATGCGTGTGTGCGACGAGGCCACAGCTGCCGGCGCGCGTGTACCTCCG
CGCTTATAGATATATCTGTGCGTAGTGCGCTGACGCCCCTGCCAAGAAAG
ATAGCGCGCTAAACTTGACTTCACGCACCAATGTGCGAACAGCGGTTGCT
TCATTGATCGGTCCGGCCGCCTGGTCCGTTCGCGCCTCTGTCTTCTGGTA
TGCGGGCGTGCGTTGCTTCGGTTACCCACGGAACTATTCGCTGGCGGTAT
ATGTGTTTCATTGTGACCGGTGGTCTGATTCCGGCTCTTCGGGCCAATAG
TGGCGAGCAGGTGCAACTATGTACAGATACGAAGGGTGTCTCCATGTCTT
GATTTCTTCAATTGACCAAACTTTCTCGATCCCATTTTTCCTCTGCTTGG
TCTGCACCCCTGGAATACCTCCCTTTCCCCCCCCCCCCGCCCATAAAACA
GGTTCGAACGTCTATGCTGCTCGTGCACGGATTGATTCACCTCATGGGTT
ACGACCACGAGACCGCGGAAGACTACGAAGCCATGGTTGCATTGGAAGAG
GAGGTGTTGCGGGCCGTATTCGGGGGGGAGAGCGTCGCCGGCGCATCACC
GCCACGAACGAACCTGAGCCAAGCAAGCAGTAGCACGTGACTCTAGCGCC
TGCTTAGTTTCGTTTCCTTTGCGTGCGCCAGCGTCACAATATTGGAAACC
TGCACGAGGTTCGTGGATTTCTAGGGGTGGAGGAACGGTTCGTTCGAGGA
GCGTGGTCCAGGTAGTGACACATCAGCGGGAACGGCACCCCTCGAACGAG
TGTTGTGGTTCCAAGTCAAGAGGTAGGATTGAGTAGAAGATTTGCGGCGT
CAGAATGGTCGGTGGAAGAAGTTAGTACCGATGCTTGGTTTTCGAGCAAA
GTTATTAAAGTTGTTCCTGCGGGTGTGGTTCGAGTTTCGCAGAGGCGCGT
CGTGGTCGTTTCTTTTTTCACAGAGCGACACAATCGGCACCAACAACTTC
GTCTCTTCGAAAGGGCGTGTTGTGTGTCCTTCCCCTTGGCAAAAGGCACG
TTGCTCTCTACGTAGCTAGCGTTGCAACACTCCGCGAGGCAAAATCTGGT
CGAAGA
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Coding sequence (CDS) from alignment at P-fluviatile_contig72:564167..568622-

>mRNA_P-fluviatile_contig72.13893.1 ID=mRNA_P-fluviatile_contig72.13893.1|Name=mRNA_P-fluviatile_contig72.13893.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1536bp|location=Sequence derived from alignment at P-fluviatile_contig72:564167..568622- (Porterinema fluviatile SAG_2381)
ATGGATCTCGAGAGCTTGGGGATTTCGATGATGATGGATCTCGAGAGCTT
GGGGATTTCGATGATGGATGACGAGACTGCGGAGGAAGTCCAGGAGCAGC
TGCGGCGTGAATGGGGATCGATGTCAGTGCAAAACAATCAGAACGCCTAC
CAAATCGACACCGCTGAACTGCAGTCGAAGGATGACGAGACTGCGGAGGA
AGTCCAGGAGCAGCTGCGGCGTGAATGGGGATCGATGTCAGTGCAAAACA
ATCAGAACGCCTACCAAATCGACACCGCTGAACTGCAGTCGAAGCTCAGC
CGGGCGATGGAGGTCCTTGGGTGCCAGGCGTGGGACGTCGGGGTGGTGCT
CACGACAGACAAAGAGGTGTCTCAGCTGAACCGCCAGCTCAGCCGGGCGA
TGGAGGTCCTTGGGTGCCAGGCGTGGGACGTCGGGGTGGTGCTCACGACA
GACAAAGAGGTGTCTCAGCTGAACCGCCAGTACCGGGGGATGGATTCGTC
GACCGACATATTGTCGTTTTCCAACCACGACATGTCCGACAATCCCGGGG
TGCTCCCAAAGTACCGGGGGATGGATTCGTCGACCGACATATTGTCGTTT
TCCAACCACGACATGTCCGACAATCCCGGGGTGCTCCCAAAGGTTAGGTT
TCCTGCGGAGATGGACCTGGGCGACATGTACATCTCACTTGCCTACGTCG
ACCGACAGATTAAAAGGGATATGCTAGAGCAACAAGCCGCAGCGGTGGCG
GCGGCGGCGGCGAAGAAGGGTGGTGGTGATGGTGATGGTGCTGTCGCGGC
CACCTCTGGGGGCTTCACGGGGGCACATGTAGAGGACCACGAGTGGTGGG
ACAGCGAGAGGGGGGTGAGCGGGGCTATGTCCAGGGTTTTCGACATCCAG
GTTAGGTTTCCTGCGGAGATGGACCTGGGCGACATGTACATCTCACTTGC
CTACGTCGACCGACAGATTAAAAGGGATATGCTAGAGCAACAAGCCGCAG
CGGTGGCGGCGGCGGCGGCGAAGAAGGGTGGTGGTGATGGTGATGGTGCT
GTCGCGGCCACCTCTGGGGGCTTCACGGGGGCACATGTAGAGGACCACGA
GTGGTGGGACAGCGAGAGGGGGGTGAGCGGGGCTATGTCCAGGGTTTTCG
ACATCCAGGTTCGAACGTCTATGCTGCTCGTGCACGGATTGATTCACCTC
ATGGGTTACGACCACGAGACCGCGGAAGACTACGAAGCCATGGTTGCATT
GGAAGAGGAGGTGTTGCGGGCCGTATTCGGGGGGGAGAGCGTCGCCGGCG
CATCACCGCCACGAACGAACCTGAGCCAAGCAAGCAGTAGCACGTGAGTT
CGAACGTCTATGCTGCTCGTGCACGGATTGATTCACCTCATGGGTTACGA
CCACGAGACCGCGGAAGACTACGAAGCCATGGTTGCATTGGAAGAGGAGG
TGTTGCGGGCCGTATTCGGGGGGGAGAGCGTCGCCGGCGCATCACCGCCA
CGAACGAACCTGAGCCAAGCAAGCAGTAGCACGTGA
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