mRNA_P-fluviatile_contig72.13877.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig72.13877.1 vs. uniprot
Match: D7FYY2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYY2_ECTSI) HSP 1 Score: 251 bits (640), Expect = 5.560e-72 Identity = 179/329 (54.41%), Postives = 230/329 (69.91%), Query Frame = 1
Query: 1 MMAAAAIRGARRSLYALLLGLMMLSAAC-QAKKLWGVDVGKKEEARQTRRGEFAALLQKASGEGGGARGTGSVISQQVGMALDALAEADLASMSLSQLCTQMIDGMLELVKDEEWIGQFAEPGELGKMASSTGLSAMLADESIASPEKDDLMELIQLENSPILYKTKFYELVEKWTGKLLSFRMDVADPAKLAAMIRSAFLTAGFDRAAVEQMMEVVEHPEILAAQIKTLASDPTVKQQLIEAAEGFMSAANAMADAVGDGDAEELLELLAAMEKEDPEMXXXXXXXXXXXXXXXXXXXXEDAEGAGVAGGFLKGMG--TGRPGLAAEL 978
MM A+RG RRSL +++ L++LSA C A KLWGVDVGKKE+ +GEFA+LL KA+G G G G I +VG L +A+ DL+ +SLS+L T +ID LE +KDE++I QFAEPG LG++A ++GLSA+L ++ +AS E+DDL+ L+ LE+SPILYKTKFYE+V+K+ GK ++FRMDVA+P KL ++ AG D+ + Q+MEVVEHPEI+A QIK +ASDP V +Q AAEGFM+ D D D +EL+E+LAAM + XXXXXXXXXXXXXXXXX DAEG A G KGMG GR GLAAEL
Sbjct: 2 MMMMGAMRGMRRSL-CVVVSLVLLSAVCVSAGKLWGVDVGKKED-----KGEFASLLNKATGMDRG-DGAGGGIGDEVGSILAQVADMDLSQLSLSELGTNVIDMFLETIKDEQFISQFAEPGVLGELAQNSGLSALLGEDGMASVERDDLLALLALEDSPILYKTKFYEIVDKFIGKTVAFRMDVANPVKLRRLVLETLQAAGLDQPMITQIMEVVEHPEIMAQQIKAMASDPAVIEQAKAAAEGFMTGMEVGNDM--DYDDDELMEMLAAMGQXXXXXXXXXXXXXXXXXXXXXXL---DAEGG--AAGLFKGMGGGAGRQGLAAEL 316 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig72.13877.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig72.13877.1 >prot_P-fluviatile_contig72.13877.1 ID=prot_P-fluviatile_contig72.13877.1|Name=mRNA_P-fluviatile_contig72.13877.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=327bp MMAAAAIRGARRSLYALLLGLMMLSAACQAKKLWGVDVGKKEEARQTRRGback to top mRNA from alignment at P-fluviatile_contig72:443567..454462+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig72.13877.1 ID=mRNA_P-fluviatile_contig72.13877.1|Name=mRNA_P-fluviatile_contig72.13877.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10896bp|location=Sequence derived from alignment at P-fluviatile_contig72:443567..454462+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig72:443567..454462+ >mRNA_P-fluviatile_contig72.13877.1 ID=mRNA_P-fluviatile_contig72.13877.1|Name=mRNA_P-fluviatile_contig72.13877.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1962bp|location=Sequence derived from alignment at P-fluviatile_contig72:443567..454462+ (Porterinema fluviatile SAG_2381)back to top |