mRNA_P-fluviatile_contig72.13850.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig72.13850.1
Unique NamemRNA_P-fluviatile_contig72.13850.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig72.13850.1 vs. uniprot
Match: D7FYW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW7_ECTSI)

HSP 1 Score: 344 bits (882), Expect = 2.970e-111
Identity = 228/401 (56.86%), Postives = 270/401 (67.33%), Query Frame = 2
Query:  218 MYVSSALSVSSPFGGGYRDSHAESVAVETSKIELQPSVLVDRDLRRTDIDS-PSVTEAAHLQERCVDMAMELFELKTRYDQQDKELKWTKREAEFRERNFKEVQRVCEEERRSSRSFMRRVKILEDQNSKLAEDNTNLRLDKDRLLSVVRRHKEAHRSDSVAAHRERLRKRNMSEKEVNRCDLASAKLELKAIGQENNRLLCKAREQDNRISELENEAAALAAKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEALLRLEAVERANVAQKAEEKAKEARESAELLAESLRIQLAMTAEKLEAKDSARARHQGSLTRYQKTIEAQAMALQATRQQLLGEKVRRQESERQARLRHIAAIDSKSRAVATAPANASGAGARTSK--GAPPTARRAA 1411
            MY + A SV SPFGGG+ DSHAE + V+ SKIELQP+++VDRDLRR D+D+ PSVTEAAHLQERCVDMA ELFELKTR+D+                               SS+SFMRRVK LE++NSKLA DN +LRLD++RLL VVRR+K+A R +SVAAHR+RLRKR+MSEKEVNRCDLASAKL LKA+GQEN RLL KA+ Q +RI ELEN    LA KL                                    HEALLRL+AVE+A+ A +            E + E+LR++L  T +KLEAKDSARARHQGS+ RYQK I++QAMALQA R+QLLGEKVRRQESERQARLRHIAAIDSKSRA A       GAGA +++   + PTARR A
Sbjct:    4 MYTARATSVLSPFGGGHCDSHAEPIPVQASKIELQPTIMVDRDLRRADLDAAPSVTEAAHLQERCVDMATELFELKTRFDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKSFMRRVKTLEEENSKLAADNADLRLDRERLLGVVRRYKDAGRKESVAAHRDRLRKRHMSEKEVNRCDLASAKLGLKAMGQENKRLLSKAKGQASRIRELENGTEVLAKKLSELEHELECAINQKDAVQQESDKALAQEQRAKSDMEHEALLRLQAVEQASSASRXXXXXXXXXXXXEAVIETLRVKLESTVKKLEAKDSARARHQGSVVRYQKMIDSQAMALQAAREQLLGEKVRRQESERQARLRHIAAIDSKSRAAA-------GAGATSTRRPASSPTARRPA 397          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig72.13850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYW7_ECTSI2.970e-11156.86Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig72contigP-fluviatile_contig72:79002..86823 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons11
Model size1429
Cds size1212
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig72.13850.1prot_P-fluviatile_contig72.13850.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig72 79219..86823 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817163.2067401-UTR-P-fluviatile_contig72:79001..792181622817163.2067401-UTR-P-fluviatile_contig72:79001..79218Porterinema fluviatile SAG_2381UTRP-fluviatile_contig72 79002..79218 +
1693571328.378548-UTR-P-fluviatile_contig72:79001..792181693571328.378548-UTR-P-fluviatile_contig72:79001..79218Porterinema fluviatile SAG_2381UTRP-fluviatile_contig72 79002..79218 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817163.2203422-CDS-P-fluviatile_contig72:79218..793171622817163.2203422-CDS-P-fluviatile_contig72:79218..79317Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 79219..79317 +
1693571328.3898363-CDS-P-fluviatile_contig72:79218..793171693571328.3898363-CDS-P-fluviatile_contig72:79218..79317Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 79219..79317 +
1622817163.233135-CDS-P-fluviatile_contig72:80162..802461622817163.233135-CDS-P-fluviatile_contig72:80162..80246Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 80163..80246 +
1693571328.3995821-CDS-P-fluviatile_contig72:80162..802461693571328.3995821-CDS-P-fluviatile_contig72:80162..80246Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 80163..80246 +
1622817163.2472374-CDS-P-fluviatile_contig72:81004..811211622817163.2472374-CDS-P-fluviatile_contig72:81004..81121Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 81005..81121 +
1693571328.4078362-CDS-P-fluviatile_contig72:81004..811211693571328.4078362-CDS-P-fluviatile_contig72:81004..81121Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 81005..81121 +
1622817163.2588089-CDS-P-fluviatile_contig72:81366..814491622817163.2588089-CDS-P-fluviatile_contig72:81366..81449Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 81367..81449 +
1693571328.415926-CDS-P-fluviatile_contig72:81366..814491693571328.415926-CDS-P-fluviatile_contig72:81366..81449Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 81367..81449 +
1622817163.270314-CDS-P-fluviatile_contig72:82185..823301622817163.270314-CDS-P-fluviatile_contig72:82185..82330Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 82186..82330 +
1693571328.4242358-CDS-P-fluviatile_contig72:82185..823301693571328.4242358-CDS-P-fluviatile_contig72:82185..82330Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 82186..82330 +
1622817163.2818475-CDS-P-fluviatile_contig72:83070..831841622817163.2818475-CDS-P-fluviatile_contig72:83070..83184Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 83071..83184 +
1693571328.4330995-CDS-P-fluviatile_contig72:83070..831841693571328.4330995-CDS-P-fluviatile_contig72:83070..83184Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 83071..83184 +
1622817163.2955036-CDS-P-fluviatile_contig72:84025..840971622817163.2955036-CDS-P-fluviatile_contig72:84025..84097Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 84026..84097 +
1693571328.4420903-CDS-P-fluviatile_contig72:84025..840971693571328.4420903-CDS-P-fluviatile_contig72:84025..84097Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 84026..84097 +
1622817163.309573-CDS-P-fluviatile_contig72:84921..851071622817163.309573-CDS-P-fluviatile_contig72:84921..85107Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 84922..85107 +
1693571328.4513702-CDS-P-fluviatile_contig72:84921..851071693571328.4513702-CDS-P-fluviatile_contig72:84921..85107Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 84922..85107 +
1622817163.3230317-CDS-P-fluviatile_contig72:85355..854361622817163.3230317-CDS-P-fluviatile_contig72:85355..85436Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 85356..85436 +
1693571328.4599807-CDS-P-fluviatile_contig72:85355..854361693571328.4599807-CDS-P-fluviatile_contig72:85355..85436Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 85356..85436 +
1622817163.335206-CDS-P-fluviatile_contig72:85947..860071622817163.335206-CDS-P-fluviatile_contig72:85947..86007Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 85948..86007 +
1693571328.4684553-CDS-P-fluviatile_contig72:85947..860071693571328.4684553-CDS-P-fluviatile_contig72:85947..86007Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 85948..86007 +
1622817163.3468814-CDS-P-fluviatile_contig72:86652..868231622817163.3468814-CDS-P-fluviatile_contig72:86652..86823Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 86653..86823 +
1693571328.4768536-CDS-P-fluviatile_contig72:86652..868231693571328.4768536-CDS-P-fluviatile_contig72:86652..86823Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 86653..86823 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig72.13850.1

>prot_P-fluviatile_contig72.13850.1 ID=prot_P-fluviatile_contig72.13850.1|Name=mRNA_P-fluviatile_contig72.13850.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=404bp
MYVSSALSVSSPFGGGYRDSHAESVAVETSKIELQPSVLVDRDLRRTDID
SPSVTEAAHLQERCVDMAMELFELKTRYDQQDKELKWTKREAEFRERNFK
EVQRVCEEERRSSRSFMRRVKILEDQNSKLAEDNTNLRLDKDRLLSVVRR
HKEAHRSDSVAAHRERLRKRNMSEKEVNRCDLASAKLELKAIGQENNRLL
CKAREQDNRISELENEAAALAAKLSELKQEAEAVRKEKTNVQQDFEETAA
SERRAQSDLEHEALLRLEAVERANVAQKAEEKAKEARESAELLAESLRIQ
LAMTAEKLEAKDSARARHQGSLTRYQKTIEAQAMALQATRQQLLGEKVRR
QESERQARLRHIAAIDSKSRAVATAPANASGAGARTSKGAPPTARRAAAT
RSA*
back to top

mRNA from alignment at P-fluviatile_contig72:79002..86823+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig72.13850.1 ID=mRNA_P-fluviatile_contig72.13850.1|Name=mRNA_P-fluviatile_contig72.13850.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7822bp|location=Sequence derived from alignment at P-fluviatile_contig72:79002..86823+ (Porterinema fluviatile SAG_2381)
CAGCGAGGAGAGCGTAGCCACGCCATAAACGTGTGTGTGCAGTATCCTTC GTTTTCTCTCTTTTTAGATGCGGAGGGACAGCTGAAGAACAGTTTTGGCA GTTGACCCCTAGATATCCACTCTATTCGCAGGATACACGAGGGTCGGTGC TCGGAAGCCGCCGCGGGGAGGCCACACCGACTACTGTGGACAACAGCCAG GCTTGGGGAAAAGGATAATGTACGTTTCATCAGCATTATCGGTCTCATCT CCGTTCGGCGGAGGGTACCGTGACAGCCATGCTGAGTCGGTTGCTGTGGA AACGTCGAAGATCGAGGTTAGTCTGCAAGCTGCAACAGCAGGTTGTCTAC CGAGTGCATTCGTTGGCTTGGTTACAGGATCGTGTGTGTACTGGAGTCTC GTCAGAGGGTATTGTTCAGCGGAGGAACGAATGGTGTCCATGCGCTTCAC AAGTATGCGCGGATCTGCGTGCGTGAGGACGTGTTGAAGACCTAGGGCAG AGCGGGATCCATCCAGCATAGATCCGACGACTCCGATGTTGTTCCGGAAA TGTCACTCAAATACCTTCCGCGCGCAGTACTTGATGATACTCCCGTCGAC CCGTATGACTTCCGTGCGGTACCGACTCAAGCACGTTGGTTCGATTCTCG AACCTATTCTTCCATTTTCCCAGAAGCTTTCGAGACTTTGTTCCATGTTT CAATGAGATCCTCTTCATCAACCCGCACATGACAACTGCGGTTATCCCCC CCTCTCCGCCCTACTACATGTACATACGCGCCACCACAGCATTGTCCCTA ATACACCAACAACCAAGGAGCTGGCAGTTGTTGTCGCATATTTCTTGATT TCACTTGCACCATACAGACCAAAAACAGGAACGTCTTGAAATCGCATGAT TTTCCGCCGGGAGCTTACTATTAATAGTTTTTCCCGCTGTGACTTATTCG TCCCTGGTGGCTCCCCGACAGCAGCGCATACACATTACCATTCGCTCCCT TGTACTCAACGCTACCCTTGAGAACGACCTCTATTGTCCTGCCAGCACGC AACAAGCGAAACACGCCGCTCGTCCTGTACCCCACCCCTCCCTCATCGTG TCGCTTCCCGGTACTCCCGCAACGAACGCTGGTTTTTCCATTCCAAACGT CGGGCGCCCAGCTGCAACCGTCGGTGCTGGTGGATCGGGACTTGCGCCGG ACAGATATCGATTCCCCCTCGGTCACCGAAGCGGCACACCTACAGGTTCA CCTTCAGACCTGCTTGCGTTTGGTAGACTTCCGCCCGCCGAGCGAAAGCA CCTCACCGTGTCATCGGTGGGCTTGTCAGATTGTTGTGTTTTACGGTGAA GGGAAGGTTGGATTTATTTGGTATGCAACCGTAGCCGAAAGGCCGGTGGT TCTGACATTTGCAGAAACGGTACGTGCTTTGTTTGCTGCACGCCATGCAT TCAGCATCTTTCGACCGTTGTACTCTGCACGAACTTAGCTTGGGGGAATG GCACGATACCGCACTTCCGAAACTGTACCGCATGCACTGATCTAGGGAAG TGTTTGGTTTACACCTGCCATCTTGGATTGGAATTTCAGATCCAAATATG CCTGCGGACGGTGCCCGAAACATTGCCAAGGCACACAACGGCTGTCGCTG GGCTTGTAGTAAGCTCACGGCGGAGGGATCGGGCGTATTGTTCGTGAAAA ACTGGAGTGAAAGCGCCGTTTATCTTGATTGCCGACTGCGTGTTTCCATG ATGCACCGGTGCTTGCCTGAACCAGATCGCATGCATTATGGCGTCCCTCA ACGAGGAGCCTTCTTCGAGCGTACACACCAGATTCATTAGCCAAGTTCAA ACAGTAGCTACAACGCGCTGAGCCCGATGCCCTGCAGCACTTAGGATCAA AGAAAGGCGCTCGCACCAATGAATCCCGAGCATCTCTTGACGTACGAAAC TCACCCGAATATCTGTCACAGATTGTCATCCCATTTGATCAACTGATGCA CAGGAACGGTGCGTTGATATGGCCATGGAACTGTTCGAGCTCAAGACTAG GTACGATCAGCAAGACAAGGAGCTCAAGTGGACAAAGAGGGAAGCCGAAT TTAGGGAACGGAATTTTAAGGTACAATATTTTCGATGTCTTCGATGTACT AAGGGACTGACTGCCGGTGCTACGACAGTAGATAATGATCAGACACATAC ACGGAACAGATTCACGTCTTTGCAAGCCTTGGCTTTGATGCCCCCTTTAC CCCTTAGTTGATATCGGTAGTTCGTTTCATTCTTTGTGTGGCACTCTGAT CTTTACTCTTTGTATATCAGTCTGATCTGTGGTGTTGTTTTGTGGTCGGG GTCGGCGTGAACCAGGAGGTACAGAGAGTTTGCGAAGAGGAGCGGCGAAG CTCCAGATCTTTCATGAGGAGGGTGAAGATCCTGGAAGACCAGAACAGGT GAGCTCGAGCTCGTTTATCAGATTTTTCACCCGGAACGAGCACAACTTAA TAAATTGCGACAGGGATCTTCTCGTGTGTTTTATGTCTGTAGCTCCACAT TTGCCCCTTACGGGCGGGCGACATCCTTGCCAACGCTTTGCTTACCAGAT TTTCATCTCGACAAGTTCATTGGTAGTTAACCCGCTCTGCGCACGGGAAG AGATGCGGTATGAATACCGTTCATTGTTGTCTCACAGAGCACAGCCGGCG ACACGAAACCCTGCCAGCCAGGCTTACATGCAGGTCCCAGCAGCGCGTCA TTATTCAAAAGGCACTTACTTAAGTATAACAGCGAGGTCCCCCAAACCGG AAAAACGCAACGAGGATGCGCCTGTGCTTGTGTCAATATCTGTAGGCAGC GCTCTTCTGAAATCCGACAACAATGCAGGATCTCGCGCACAGCTTTATTT GCCGTTGCTCGCGTGCTCCGCCTGCACTAAGGGAATCTCTGCAGAACCAG GCAGATAAATGTTGTTTGGGACTCTGCCTCATAGCTCTCGCGCATCTCGC CATGCTAGCGAACGGAGACGTACACGAAGATGACTACGACAATAGCAAAA ACTCGATGCCAGAAATAATAGCAGCCAATCAAAGAACCCAGCGGCCATGC CTTCGTTGACAGCTGCACAAACACATCAATGGACGTTGCTCCGCTGCGAA AATGCATCTCCCGGTGCGCGGGCGAGCGAATCAGCAAGCTCGCCGAGGAC AACACCAACCTGCGGCTGGACAAGGACCGGCTACTGAGTGTGGTACGGAG GCACAAGGAGGCCCATCGATCGGATTCCGTCGCCGCTCACCGGGAGCGCC TCCGAAAGCGCAACATGTCCGAGAAGGAGGTACGGTGCGACGACGAGTAC CTAGCCGCGTACGATATCGCGAAGCCCTTCGACCTGTCTCTGGGGTATGC GGCAGTAATGATCCAAACATAAGAGGTTGCTAGCGCCGAGGATGCGTTTG GTGGGGTGTCCGGCTGCGATCGGTATGCTTCCTTCGAAGGGATCAAACAA ACCCTTCCTTTTGGGATTTGGAGTTCACTTAACTCGTTGCACCAGACGGG GGGGGCGGCGGGTATAGCCTGGTGTCCCCGAAACACTTGTTTGAGTTTGG CACTGTTGTATTTGTGGCCATTTATTCTAGTGCTTCCTCTTCTAAGGAAA GTTGGGGAACGAAGGCGAAACGCAACTGAAGCAAACTTTTCTCTCCCGGT TTATCATCCTTGTCGCCTTCTCAAGTAGCACACGTCAGGGTAATGAGTCG CTTCACCATGTCGAAACATGGCCGATTTTGGAAGTAGTGCCTTAGAGCGC ATGGAGGTCATTCCCCGTGCGTCCTTTAGCCATGTCGACGCAAATACCAG AACAGAGTACGCCTGCTTTTATGTTGTTGTTTTTGCAATGATCGTGTGGT TGATCTCCAATCTGTGGACATCATAATTGAAACCAAGCGCGGATGGATGG ACGAAAGCAAGACTGATTAGACCTTCTTTGGCGCACGAAAATCACAGCGA CGGAACACCGACGACACCAGTTCGCCTTCCTTCCTGAGTCCTGCGATGCT TCCATTGCATGCCCGTCAGGTGAACCGGTGCGACCTGGCCTCGGCGAAGC TAGAGCTCAAGGCGATTGGGCAAGAGAACAACCGACTGCTATGCAAAGCG AGGGAGCAAGACAACCGTATCAGCGAGCTCGAGGTGCCAATATCGCACAC GCCGGCTCACCCAGTCTCGTTCCCACCTCGCTGGGGCTGAGAAGAGTTGC TGTTAAAGCGCTGATATGGACCGTTTCAGACGTGTTTTGACCGAGGATCC AGGGCTTGTGCAGGAGAAGACCGATGTTTTCCCATCGAACAGTGCAGCTT TGCTTTTGCCAAAGCAGCAAGGCGCGTGCGCTCCGTGCGAGATCGATACG GGCTAGGCGCCAGTGCACGGGCAGCGAAGCCTACCTACAGCTCAAGCCCC CGAATCCCGCCCTCTTGATCTTGCTTTGTCGACTATTTGCAAAGCCCAAG TGATTGCTCGAGTACTCCGTTCTGAACGGCCAGAACGGCAAAGGATCTTT ATTGTGCTCTTTCGACTCCCAAGAGGAGAAGAAACCATTGTCGATATCGG AAATGGGCGCGGTCAACGATCGCGATATCTCTCTTGCTTGCTAGGCTAAA AAACAACAAGTCTTTCCTGTTTCTGCCGCCGTGTTATCTACCGCCCCAAG TAGACGTGGCCCTTGAAAGTACCACACCTTCCTGAAGAATCCCCCGTCAC TCTCCATGTTTCCCAACTCTGCCCTTCTGCTGAACGCGCAAAAATAAAAA AAATGAGATATATCGCTCTTTGAAGGACGTTCGGGGACCTCACGGAATAT CCATTCCGCCGCCGACTACGTCCCATACGAAACCCGGTAGGCGTGCCCCA TCCCGTCTTTGCAAGGGGCGCGAGGTCCTTGATCTCACGATTTCCGCACG AATATTTATGAGTATCCCTCGTCTGTGTTTTCCCCGCTTCCCTCTCTCTT TTGCGCAACACGCAAACCCCACAGAATGAGGCGGCGGCGCTGGCTGCGAA GCTGTCCGAACTGAAGCAAGAGGCGGAAGCTGTGAGGAAAGAAAAGGTGA AAGATGTGCCCTGGATCTGGCAGGCTATTCTGCACATATTCTTGGACCTC CGAACCTCCCACAACCCCCCAGACCCAACTAGTTGCAAAAACACTCTGAT TGACCCTGCTTGGTCGCGTGTTTGGATTCAACGAAAGGGAACCTCTCGCA CTTTCGTGCTTCAGGAACGTCTACATCATCGTAAGCCGATTGAAGTTATC TACCCCCGCTCTGGCGAGCGGGGATCACGTACAACAACACACCCAACGGT CGAGCGATGCAAGGCAGTGCACTCATCCAATTTTGTGTTCACTCTGTTGC TGGTGAACTGCCACCATTTTGGGGCTTGGAGAGCGAAATTGGCTGAAACG GTCCTGAACAGGCTGGCAGGTATCAAGATTCCAAGACCGGTCAGTTTCTT ATCCCCCCTTGGCTGCGCCCCCGCCCCCTTCCCTGTAATCGCGACGGCGA TCGGTTCAAAGCTAGTGGCGGTGTCGAAACCGTAAGCGTAGCCAAGCACG GATCAAATGTTGAGCAAATTTTTCTTCTTGCTAGGATCAGGGCTGGTCAG GTCGTGCTCGACCACGCATGTTAGCGCAGTTCCCAGTAACACGACACGAA AGGCCGGCGTGAACCGAACCCAGGCGTGGAGTGATACTGTGACCCACCTT TTCGAGGGACAACAAGATGCACTTCACTTTTTATCTCCCCCCCTTGCCCT CATGAGTACGCCCCCTTGCCCTCGCTCTCTCACTCGCGCTCTCTCTCTTA ATGACTGCTCATCTGCCTGATTTTCTCTTTGTCTCCCTGCTACCTTGTAC GCGCAACTGACGCGGGGCAGACCAACGTGCAGCAAGATTTTGAAGAGACG GCGGCGTCGGAGCGAAGGGCTCAGTCCGACTTGGAGCACGAAGCTCTCCT GAGGCTAGAGGCGGTCGAGCGCGCCAACGTAGCCCAGAAGGCGGAGGAGA AGGCCAAGGAAGCCAGAGAATCAGCAGAGCTGCTGGCTGAATCCTTACGA ATCCAGGTTTCTGCGTCACTTGCCTTCCACTGCTCACCTCAGGGCAATCC GTGGGGTTCCTCGCAAAGTGACGCCATTGAGTTTTTGTTTTTCAATCGGA GACTCAAGTTATCATCTTGGGCAAATGTCGGTTTAGCTTCGACCGGGACG GGACGTGTCACGGTAGTTTCCGCATTTTTTGTGCCCCTCGTGGCCTTGCT GTCGCCGACCTTGTCTTTGATCCTATCATACATGTCCTGCTGTGATACTG GCAGCTGGCGATGACGGCGGAAAAGCTGGAGGCGAAGGACTCGGCGAGAG CTAGGCACCAGGGCAGCCTGACTCGTTACCAGAAGGTAAGGGAACAGCGA TGGAGAGATGAGAGGATGCGATTGACTTGCTGCCAAGCTGCTGGACTAGA TGCATTCGCGTGGAGATCAAGTACTCGATCATGGGCAAACGAGACTTGCC CCTTGTGCGTACCGTGTCTTGAACCTCGGCGAGTAGGCGAATCATTGCCA AGGAGATATACACTCCCTGAATGTGAGTTCAGGCACTTGCGTCTCAACTC CACGCATGAAGAAGAAAACCACGGAACGCGTGCTTATTATATAACAGGAT TAATAATCCCTTCCGAACCTTGGAATAGGTACGACAGAGATCTCAAGTGT GCCTCGACGTACGAATTTTGTCGTCTTGCCACCATCAAGCTGGGATTGCA CTACCTAAGCGAGTTATACAACTTACGCACACATGAAGGCTTCCAAACTG TTCCGAAACGCTGCGCTAAAGCCAATATCACTTTGACCGCTTGGCGTGAG CATGACACCGTTTATCCCCGAAATGCCGTTGCTCCTCGTTTCGAAGACGA TTGAGGCCCAAGCAATGGCGCTCCAGGCCACCCGCCAACAGCTCCTTGGC GAGAAGGTTCGAGAGAAAGAGTCACCGTAGGGCCAACGCTGTCCTTCGCT ACGAAAAACGCCTTTGTGAAGCACTCGGACGATCTCGCTAGGAAACCAGC CAGATCGATGGCCAGGTTGACCGTGCTTCGCTTCGTAGATAGGGCCTGTT GTGGTGCCTAAGGATGAGTACGGTTTCTCCTTCGCGACAGGCGGGAGCAT CTTGATGGGCGGTTGAGCCTTCCTTCATTGAAACGCAAAGATTTACGGGA AGCGTTTGCCGCGCAACGTCGTTCAGTAGAGTATCTCCGCCCAAAGCACA GGTAGATCGAGCGCGTAGACAAGTGAGAGGGTTGTTCTTTCGCAGGTAAA GATGGCGATGCTTCATTTTCTTTCCATAAAGCATGACGCTGGCTAGGTGA TGGCTTCCTCTGAGAGTGAAAGTGTGTTGCTCGACGCCTACACTTTGGAG CGAAATCTTACGTTTAGCTCTCAACTGTAGAGAAATAAATAACAGTGCCC CGTGCCCCTGATGTGTAGGTCAGCATCTGGGCCCCTCACACAAGTGAGGA CACAGCAGTGTTTTCCTACAGATGAGGAAAACATTCAGCGGCTCTTCTTC CTCCGAATCCGTCTTTCTTCTTCGCACCTCTTCTTTTCATTTTTTGCGCA GGTCCGAAGACAGGAGTCAGAGCGTCAAGCTCGGCTTCGGCACATTGCTG CGATAGACTCAAAGTCTCGAGCCGTTGCCACGGCTCCCGCTAACGCCAGT GGCGCCGGCGCTCGAACCTCCAAGGGGGCACCGCCGACAGCGAGGCGTGC CGCGGCAACGCGATCCGCTTGA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig72:79002..86823+

>mRNA_P-fluviatile_contig72.13850.1 ID=mRNA_P-fluviatile_contig72.13850.1|Name=mRNA_P-fluviatile_contig72.13850.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2424bp|location=Sequence derived from alignment at P-fluviatile_contig72:79002..86823+ (Porterinema fluviatile SAG_2381)
ATGTACGTTTCATCAGCATTATCGGTCTCATCTCCGTTCGGCGGAGGGTA
CCGTGACAGCCATGCTGAGTCGGTTGCTGTGGAAACGTCGAAGATCGAGA
TGTACGTTTCATCAGCATTATCGGTCTCATCTCCGTTCGGCGGAGGGTAC
CGTGACAGCCATGCTGAGTCGGTTGCTGTGGAAACGTCGAAGATCGAGCT
GCAACCGTCGGTGCTGGTGGATCGGGACTTGCGCCGGACAGATATCGATT
CCCCCTCGGTCACCGAAGCGGCACACCTACAGCTGCAACCGTCGGTGCTG
GTGGATCGGGACTTGCGCCGGACAGATATCGATTCCCCCTCGGTCACCGA
AGCGGCACACCTACAGGAACGGTGCGTTGATATGGCCATGGAACTGTTCG
AGCTCAAGACTAGGTACGATCAGCAAGACAAGGAGCTCAAGTGGACAAAG
AGGGAAGCCGAATTTAGGGAACGGAATTTTAAGGAACGGTGCGTTGATAT
GGCCATGGAACTGTTCGAGCTCAAGACTAGGTACGATCAGCAAGACAAGG
AGCTCAAGTGGACAAAGAGGGAAGCCGAATTTAGGGAACGGAATTTTAAG
GAGGTACAGAGAGTTTGCGAAGAGGAGCGGCGAAGCTCCAGATCTTTCAT
GAGGAGGGTGAAGATCCTGGAAGACCAGAACAGGAGGTACAGAGAGTTTG
CGAAGAGGAGCGGCGAAGCTCCAGATCTTTCATGAGGAGGGTGAAGATCC
TGGAAGACCAGAACAGCAAGCTCGCCGAGGACAACACCAACCTGCGGCTG
GACAAGGACCGGCTACTGAGTGTGGTACGGAGGCACAAGGAGGCCCATCG
ATCGGATTCCGTCGCCGCTCACCGGGAGCGCCTCCGAAAGCGCAACATGT
CCGAGAAGGAGCAAGCTCGCCGAGGACAACACCAACCTGCGGCTGGACAA
GGACCGGCTACTGAGTGTGGTACGGAGGCACAAGGAGGCCCATCGATCGG
ATTCCGTCGCCGCTCACCGGGAGCGCCTCCGAAAGCGCAACATGTCCGAG
AAGGAGGTGAACCGGTGCGACCTGGCCTCGGCGAAGCTAGAGCTCAAGGC
GATTGGGCAAGAGAACAACCGACTGCTATGCAAAGCGAGGGAGCAAGACA
ACCGTATCAGCGAGCTCGAGGTGAACCGGTGCGACCTGGCCTCGGCGAAG
CTAGAGCTCAAGGCGATTGGGCAAGAGAACAACCGACTGCTATGCAAAGC
GAGGGAGCAAGACAACCGTATCAGCGAGCTCGAGAATGAGGCGGCGGCGC
TGGCTGCGAAGCTGTCCGAACTGAAGCAAGAGGCGGAAGCTGTGAGGAAA
GAAAAGAATGAGGCGGCGGCGCTGGCTGCGAAGCTGTCCGAACTGAAGCA
AGAGGCGGAAGCTGTGAGGAAAGAAAAGACCAACGTGCAGCAAGATTTTG
AAGAGACGGCGGCGTCGGAGCGAAGGGCTCAGTCCGACTTGGAGCACGAA
GCTCTCCTGAGGCTAGAGGCGGTCGAGCGCGCCAACGTAGCCCAGAAGGC
GGAGGAGAAGGCCAAGGAAGCCAGAGAATCAGCAGAGCTGCTGGCTGAAT
CCTTACGAATCCAGACCAACGTGCAGCAAGATTTTGAAGAGACGGCGGCG
TCGGAGCGAAGGGCTCAGTCCGACTTGGAGCACGAAGCTCTCCTGAGGCT
AGAGGCGGTCGAGCGCGCCAACGTAGCCCAGAAGGCGGAGGAGAAGGCCA
AGGAAGCCAGAGAATCAGCAGAGCTGCTGGCTGAATCCTTACGAATCCAG
CTGGCGATGACGGCGGAAAAGCTGGAGGCGAAGGACTCGGCGAGAGCTAG
GCACCAGGGCAGCCTGACTCGTTACCAGAAGCTGGCGATGACGGCGGAAA
AGCTGGAGGCGAAGGACTCGGCGAGAGCTAGGCACCAGGGCAGCCTGACT
CGTTACCAGAAGACGATTGAGGCCCAAGCAATGGCGCTCCAGGCCACCCG
CCAACAGCTCCTTGGCGAGAAGACGATTGAGGCCCAAGCAATGGCGCTCC
AGGCCACCCGCCAACAGCTCCTTGGCGAGAAGGTCCGAAGACAGGAGTCA
GAGCGTCAAGCTCGGCTTCGGCACATTGCTGCGATAGACTCAAAGTCTCG
AGCCGTTGCCACGGCTCCCGCTAACGCCAGTGGCGCCGGCGCTCGAACCT
CCAAGGGGGCACCGCCGACAGCGAGGCGTGCCGCGGCAACGCGATCCGCT
TGAGTCCGAAGACAGGAGTCAGAGCGTCAAGCTCGGCTTCGGCACATTGC
TGCGATAGACTCAAAGTCTCGAGCCGTTGCCACGGCTCCCGCTAACGCCA
GTGGCGCCGGCGCTCGAACCTCCAAGGGGGCACCGCCGACAGCGAGGCGT
GCCGCGGCAACGCGATCCGCTTGA
back to top