mRNA_P-fluviatile_contig72.13850.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig72.13850.1 vs. uniprot
Match: D7FYW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW7_ECTSI) HSP 1 Score: 344 bits (882), Expect = 2.970e-111 Identity = 228/401 (56.86%), Postives = 270/401 (67.33%), Query Frame = 2
Query: 218 MYVSSALSVSSPFGGGYRDSHAESVAVETSKIELQPSVLVDRDLRRTDIDS-PSVTEAAHLQERCVDMAMELFELKTRYDQQDKELKWTKREAEFRERNFKEVQRVCEEERRSSRSFMRRVKILEDQNSKLAEDNTNLRLDKDRLLSVVRRHKEAHRSDSVAAHRERLRKRNMSEKEVNRCDLASAKLELKAIGQENNRLLCKAREQDNRISELENEAAALAAKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEALLRLEAVERANVAQKAEEKAKEARESAELLAESLRIQLAMTAEKLEAKDSARARHQGSLTRYQKTIEAQAMALQATRQQLLGEKVRRQESERQARLRHIAAIDSKSRAVATAPANASGAGARTSK--GAPPTARRAA 1411
MY + A SV SPFGGG+ DSHAE + V+ SKIELQP+++VDRDLRR D+D+ PSVTEAAHLQERCVDMA ELFELKTR+D+ SS+SFMRRVK LE++NSKLA DN +LRLD++RLL VVRR+K+A R +SVAAHR+RLRKR+MSEKEVNRCDLASAKL LKA+GQEN RLL KA+ Q +RI ELEN LA KL HEALLRL+AVE+A+ A + E + E+LR++L T +KLEAKDSARARHQGS+ RYQK I++QAMALQA R+QLLGEKVRRQESERQARLRHIAAIDSKSRA A GAGA +++ + PTARR A
Sbjct: 4 MYTARATSVLSPFGGGHCDSHAEPIPVQASKIELQPTIMVDRDLRRADLDAAPSVTEAAHLQERCVDMATELFELKTRFDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSKSFMRRVKTLEEENSKLAADNADLRLDRERLLGVVRRYKDAGRKESVAAHRDRLRKRHMSEKEVNRCDLASAKLGLKAMGQENKRLLSKAKGQASRIRELENGTEVLAKKLSELEHELECAINQKDAVQQESDKALAQEQRAKSDMEHEALLRLQAVEQASSASRXXXXXXXXXXXXEAVIETLRVKLESTVKKLEAKDSARARHQGSVVRYQKMIDSQAMALQAAREQLLGEKVRRQESERQARLRHIAAIDSKSRAAA-------GAGATSTRRPASSPTARRPA 397 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig72.13850.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig72.13850.1 >prot_P-fluviatile_contig72.13850.1 ID=prot_P-fluviatile_contig72.13850.1|Name=mRNA_P-fluviatile_contig72.13850.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=404bp MYVSSALSVSSPFGGGYRDSHAESVAVETSKIELQPSVLVDRDLRRTDIDback to top mRNA from alignment at P-fluviatile_contig72:79002..86823+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig72.13850.1 ID=mRNA_P-fluviatile_contig72.13850.1|Name=mRNA_P-fluviatile_contig72.13850.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7822bp|location=Sequence derived from alignment at P-fluviatile_contig72:79002..86823+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig72:79002..86823+ >mRNA_P-fluviatile_contig72.13850.1 ID=mRNA_P-fluviatile_contig72.13850.1|Name=mRNA_P-fluviatile_contig72.13850.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2424bp|location=Sequence derived from alignment at P-fluviatile_contig72:79002..86823+ (Porterinema fluviatile SAG_2381)back to top |