mRNA_P-fluviatile_contig72.13849.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig72.13849.1
Unique NamemRNA_P-fluviatile_contig72.13849.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig72.13849.1 vs. uniprot
Match: D7FYW6_ECTSI (Nudix hydrolase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW6_ECTSI)

HSP 1 Score: 382 bits (981), Expect = 2.830e-127
Identity = 190/238 (79.83%), Postives = 211/238 (88.66%), Query Frame = 3 
Query:  117 MLKYTTDHYDGVIVDEASLKLHDSVDEFKALLATSLEAWRSDGKKGVWLKVPAHRTELVPVSIDLGFELHHAEKAYIMLNMWLPPTENQLPGNASHQVGVGAVVLNDDGDMLVVREKNGPLRGTGIWKLPTGLIDAGEDLPNAAAREVLEETGVETEFDSVLAFRHGHRGLFGKSDLFFVVRMQLKPGFDPYALRPQESEIEECMWMSRKQFAKQTAESGTVLLREITKVMEAHLASE 830
            +L++TTD YDGV VD ASL    + +EFK++L  SLEAWRS GKKGVWLKVPA RTELVPVSIDLGFELHHAEKAYIMLNMWLP T +QLP NASHQVGVGA+VLN+DGD+LVVRE+NGPLRGTGIWK PTGLIDAGEDLP+AAAREV EETG++TEFDSVLAFRHGHRGLFGKSDLFFVVRM+L PG D  AL+PQESEIEEC WM RK FAKQ+AESGTVLL+E+T +ME HLA E
Sbjct:    2 LLEHTTDIYDGVTVDGASLPA--TTEEFKSVLEASLEAWRSTGKKGVWLKVPADRTELVPVSIDLGFELHHAEKAYIMLNMWLPSTASQLPANASHQVGVGALVLNEDGDVLVVRERNGPLRGTGIWKFPTGLIDAGEDLPDAAAREVREETGLDTEFDSVLAFRHGHRGLFGKSDLFFVVRMRLTPGADSSALQPQESEIEECQWMPRKLFAKQSAESGTVLLQELTTIMEGHLAGE 237
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BLAST of mRNA_P-fluviatile_contig72.13849.1 vs. uniprot
Match: A0A2P6TQS8_CHLSO (Nudix hydrolase 8 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TQS8_CHLSO)

HSP 1 Score: 231 bits (590), Expect = 4.210e-66
Identity = 116/221 (52.49%), Postives = 150/221 (67.87%), Query Frame = 3 
Query:  135 DHYDGVIVDEASLKLHDSVDEFKALLATSLEAWRSDGKKGVWLKVPAHRTELVPVSIDLGFELHHAEKAYIMLNMWLPPTENQLPGNASHQVGVGAVVLNDDGDMLVVREKNGPLRGTGIWKLPTGLIDAGEDLPNAAAREVLEETGVETEFDSVLAFRHGHRGLFGKSDLFFVVRMQLKPGFDPYALRPQESEIEECMWMSRKQFAKQTAESGTVLLREI 797
            D YDG+I+D  +L    +V+EF A +  S+ AW++ G +G+WLK+P  R   V  ++D GFE HHAE  Y+ML  WLP TEN+LP NASHQVGVGA VLN+  ++LVV+E+NGPLRG G+WK+PTGL+ AGED+  AA REVLEETGV   FD VLA R  H   FGKSD+FF V ++L+PG  P  LR QE E+    WM   ++      +   LLR+I
Sbjct:   19 DAYDGLILDPEALP--STVEEFTAAMDESIPAWQAHGYRGIWLKLPLSRAHFVGHAVDRGFEFHHAETDYLMLTRWLPDTENKLPPNASHQVGVGAFVLNEQREVLVVQERNGPLRGKGVWKMPTGLVQAGEDISEAAEREVLEETGVRARFDCVLAMRQAHGFAFGKSDMFFCVALKLEPG--PQELRMQEDELVGVRWMPLAEYLAIDFHASRPLLRQI 235
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BLAST of mRNA_P-fluviatile_contig72.13849.1 vs. uniprot
Match: A0A7S3VTM7_DUNTE (Hypothetical protein n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VTM7_DUNTE)

HSP 1 Score: 224 bits (570), Expect = 2.120e-65
Identity = 117/231 (50.65%), Postives = 150/231 (64.94%), Query Frame = 3 
Query:  105 QKATMLKYTTDHYDGVIVDEASLKLHDSVDEFKALLATSLEAWRSDGKKGVWLKVPAHRTELVPVSIDLGFELHHAEKAYIMLNMWLPPTENQLPGNASHQVGVGAVVLNDDGDMLVVREKNGPLRGTGIWKLPTGLIDAGEDLPNAAAREVLEETGVETEFDSVLAFRHGHRGLFGKSDLFFVVRMQLKPGFDPYALRPQESEIEECMWMSRKQFAKQTAESGTVLLREI 797
            Q   ML+Y  D Y GVIVD   L     V  FKA L  SL+AW+ DGK+G+WLKVP      VP +++LGF  HHAE  YIML  W+    + +P NASHQVG+GA V+N+   +L+V+EKNGPL+G G+WK+PTGL+DAGED+  AA REV EETG+ T FDSVLA R  H    GKSDLF +V +  +PG     + P ESE+E C WM  +++A Q  + G  L  +I
Sbjct:   41 QPELMLEYANDAYGGVIVDTKGLP--SDVHHFKAALRDSLQAWQQDGKRGIWLKVPLLLATHVPPAVELGFRPHHAEPEYIMLVNWVGSGVSTIPPNASHQVGIGACVINEHRQILMVQEKNGPLKGKGVWKIPTGLVDAGEDIHTAAEREVQEETGIRTTFDSVLAVRQAHGFGAGKSDLFVMVGLIPEPGQSK--VTPCESELEACKWMPLEEYADQPFQRGVALYDKI 267
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BLAST of mRNA_P-fluviatile_contig72.13849.1 vs. uniprot
Match: A0A1Y1IAP3_KLENI (Nudix hydrolase homolog n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAP3_KLENI)

HSP 1 Score: 223 bits (567), Expect = 2.850e-65
Identity = 117/235 (49.79%), Postives = 151/235 (64.26%), Query Frame = 3 
Query:  135 DHYDGVIVDEASLKLHDSVDEFKALLATSLEAWRSDGKKGVWLKVPAHRTELVPVSIDLGFELHHAEKAYIMLNMWLPPTENQLPGNASHQVGVGAVVLNDDGDMLVVREKNGPLRGTGIWKLPTGLIDAGEDLPNAAAREVLEETGVETEFDSVLAFRHGHRGLFGKSDLFFVVRMQLKPGFDPYALRPQESEIEECMWMSRKQFAKQTAESGTVLLREITKVMEAHLASEQLG 839
            D YDG+IV EA L L  +V+EF++ L  S+  W++ GKKG+WLK+P    +LVP +I  GF  HHA+  Y ML +WLP   + LP NASHQVGVGA +LND G++L V+EKNGPLRGTGIWKLPTGL + GED+  AA REV EETG++ EF  VL FR  H    GKSDLFFV  ++       + + PQESEI +  W+S K F +Q   +   L R +  +  A    +  G
Sbjct:   23 DRYDGMIV-EADL-LPSTVEEFRSRLEASILHWKAQGKKGIWLKLPLSHVDLVPTAIKAGFGYHHADPGYCMLTLWLPEVPSTLPANASHQVGVGAFLLNDAGEVLAVQEKNGPLRGTGIWKLPTGLANHGEDICAAAVREVKEETGIDAEFQEVLCFRQAHGIAHGKSDLFFVCALRALS----HDITPQESEIADAKWLSLKSFREQPFFADRPLFRTMMDICAAQARGDYRG 251
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BLAST of mRNA_P-fluviatile_contig72.13849.1 vs. uniprot
Match: E1Z7H0_CHLVA (Nudix hydrolase domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z7H0_CHLVA)

HSP 1 Score: 217 bits (553), Expect = 7.980e-64
Identity = 104/214 (48.60%), Postives = 143/214 (66.82%), Query Frame = 3 
Query:  111 ATMLKYTTDHYDGVIVDEASLKLHDSVDEFKALLATSLEAWRSDGKKGVWLKVPAHRTELVPVSIDLGFELHHAEKAYIMLNMWLPPTENQLPGNASHQVGVGAVVLNDDGDMLVVREKNGPLRGTGIWKLPTGLIDAGEDLPNAAAREVLEETGVETEFDSVLAFRHGHRGLFGKSDLFFVVRMQLKPGFDPYALRPQESEIEECMWMSRKQF 752
            A ++    D YDG I DE S+    +  EF   L  SL  W+  G +G+WLK+PA +  ++  ++D GFE HHAEK Y+ML  WLP +EN+LP NASHQVG+GA V+N+  ++LVV+E++GPLRG G+WK+PTGL+  GED+  AA REVLEETG+   FD+VLA R  H   FGKSD+FFVV ++++ G     L  QE E+    WM  +++
Sbjct:    2 AALISGHEDAYDGFICDEQSVPA--APGEFGVALDASLAVWQQKGYRGIWLKMPAAKAHVIGHAVDRGFEFHHAEKEYVMLTRWLPSSENKLPPNASHQVGMGAFVMNERREVLVVQERSGPLRGQGVWKMPTGLVQQGEDISEAAEREVLEETGIRARFDAVLAMRQAHGFAFGKSDMFFVVALKMEAGPQARELCMQEDELVGVRWMGLEEY 213
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BLAST of mRNA_P-fluviatile_contig72.13849.1 vs. uniprot
Match: A0A5J4Y3E2_9CHLO (Nudix hydrolase 2-like n=1 Tax=Trebouxia sp. A1-2 TaxID=2608996 RepID=A0A5J4Y3E2_9CHLO)

HSP 1 Score: 220 bits (561), Expect = 1.030e-63
Identity = 108/215 (50.23%), Postives = 146/215 (67.91%), Query Frame = 3 
Query:  111 ATMLKYTTDHYDGVIVDEASLKLHDSVDEFKALLATSLEAWRSDGKKGVWLKVPAHRTELVPVSIDLGFELHHAEKAYIMLNMWLPPTENQLPGNASHQVGVGAVVLNDDGDMLVVREKNGPLRGTGIWKLPTGLIDAGEDLPNAAAREVLEETGVETEFDSVLAFRHGHRGLFGKSDLFFVVRMQLKPGFDPYALRPQESEIEECMWMSRKQFA 755
            A ML    D Y+G IV    L    + DEF + L  SL+ W+  GKKG+W+ VPA +++L+PV++  GF  HHAEK Y+ML  WLP TE+ LP NASHQVG+GA V+N   ++LVV+E+ GPL+G+G+WK+PTGL+  GED+  AA REVLEETG+E  F++VLA R  H+  FGKSD+FF V   LKP  D   L  Q +E++   WM  +++A
Sbjct:   74 AQMLLGRADAYEGFIVSADDLP--STSDEFDSRLQQSLQDWQKSGKKGIWITVPADKSQLIPVAVQHGFTFHHAEKGYVMLTRWLPTTEDTLPPNASHQVGIGAFVVNSKKEVLVVQERFGPLKGSGVWKMPTGLVLVGEDITEAAEREVLEETGLEATFEAVLAIRQSHKAAFGKSDMFFAVA--LKPVDDSQKLVAQATEVDGVKWMPLEEYA 284
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BLAST of mRNA_P-fluviatile_contig72.13849.1 vs. uniprot
Match: A0A2P6VEC6_9CHLO (Nudix hydrolase 8 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VEC6_9CHLO)

HSP 1 Score: 219 bits (557), Expect = 1.930e-63
Identity = 114/238 (47.90%), Postives = 155/238 (65.13%), Query Frame = 3 
Query:  108 KATMLKYTTDHYDGVIVDEASLKLHDSVDEFKALLATSLEAWRSDGKKGVWLKVPAHRTELVPVSIDLGFELHHAEKAYIMLNMWLPPT-ENQLPGNASHQVGVGAVVLNDDGDMLVVREKNGPLRGTGIWKLPTGLIDAGEDLPNAAAREVLEETGVETEFDSVLAFRHGHRGLFGKSDLFFVVRMQLKPGFDPYALRPQESEIEECMWMSRKQFAKQTAESGTVLLREITKVMEAH 818
            +A +L+   D+YDG+IVD+       +  EF   L  SL AWR  G +G+WLK+P  R   V  ++D GF+ HHAE+ Y+ML  WLP   EN+LP NASHQVGVGA VLN+  ++LVV+EK+GPLRG G+WK+PTGL+  GED+  AA REVLEETGV   FD+VLA R  H   +GKSD+FFVV ++L+PG  P  L+ QE E+    WM  +++  +   +   L ++I     A+
Sbjct:   16 QAGLLQGHEDNYDGLIVDDFEAPPGTAA-EFADALQGSLAAWRDKGYRGIWLKLPTTRAHYVGHAVDAGFDFHHAEQDYVMLTTWLPTDCENKLPPNASHQVGVGAFVLNERREVLVVQEKSGPLRGKGVWKMPTGLVQQGEDVTEAAEREVLEETGVRARFDAVLAMRQAHGFAWGKSDMFFVVALKLEPG--PQVLQMQEDELVGVRWMPLEEYFAEPFTAARPLFKQIHAACRAY 250
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BLAST of mRNA_P-fluviatile_contig72.13849.1 vs. uniprot
Match: A0A7J7PRR4_9CHLO (NUDIX hydrolase domain-like protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PRR4_9CHLO)

HSP 1 Score: 221 bits (562), Expect = 2.540e-63
Identity = 111/216 (51.39%), Postives = 142/216 (65.74%), Query Frame = 3 
Query:  117 MLKYTTDHYDGVIVDEASLKLHDSVDEFKALLATSLEAWRSDGKKGVWLKVPAHRTELVPVSIDLGFELHHAEKAYIMLNMWLPPTENQLPGNASHQVGVGAVVLNDDGDMLVVREKNGPLRGTGIWKLPTGLIDAGEDLPNAAAREVLEETGVETEFDSVLAFRHGHRGLFGKSDLFFVVRMQLKPGFDP-YALRPQESEIEECMWMSRKQFAKQ 761
            ML+   D YDG+IV   SL        FKA L  SL+AW   GK+G+WL+VP   ++L+PV+++ GF  HHAEK Y+M+  WLP TEN LP NASHQVGVGAVV+N   +MLVV+E NGPLRG G WK+PTGL+  GEDL +A  REVLEETGV  +F  ++A R  H  +FGKSD+FF   + L+ G D    L+  E EI    WM  +++  Q
Sbjct:   66 MLEAEEDRYDGIIVKPDSLPADPGT--FKAALEESLQAWTKQGKRGIWLRVPIALSQLIPVAVEPGFTFHHAEKDYVMMTKWLPQTENTLPPNASHQVGVGAVVVNARQEMLVVQEANGPLRGQGFWKMPTGLVQEGEDLVDAVEREVLEETGVRAKFSGLIAIRQAHGFMFGKSDMFFCCGLTLQEGSDTGQQLKACEREIAAVKWMPVQEYTSQ 279
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BLAST of mRNA_P-fluviatile_contig72.13849.1 vs. uniprot
Match: A0A061R3E1_9CHLO (Nudix hydrolase 2-like n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R3E1_9CHLO)

HSP 1 Score: 217 bits (552), Expect = 4.400e-63
Identity = 110/214 (51.40%), Postives = 141/214 (65.89%), Query Frame = 3 
Query:  111 ATMLKYTTDHYDGVIVDEASLKLHDSVDEFKALLATSLEAWRSDGKKGVWLKVPAHRTELVPVSIDLGFELHHAEKAYIMLNMWLPPTENQLPGNASHQVGVGAVVLNDDGDMLVVREKNGPLRGTGIWKLPTGLIDAGEDLPNAAAREVLEETGVETEFDSVLAFRHGHRGLFGKSDLFFVVRMQLKPGFDPYALRPQESEIEECMWMSRKQF 752
            ++ L  T D Y GV+V  + L     +  FK  L +SL+ WR +G KGVWLK+P     LVP +++ GF  HHAE  Y+ML  WL  + + LP NASHQVGVGA VLND G++L V+E NGPL+G G WK+PTG++  GEDL   A REVLEETG++ EF +VLA R  H   FGKSDLFFV  M+ KPG  P  L+P E+EIE   W+  ++F
Sbjct:    9 SSTLSATGDSYGGVVVHSSGLPKEPQI--FKTSLQSSLKVWRRNGTKGVWLKLPIEYAALVPEAVEQGFIYHHAEADYVMLCHWLQDSPSTLPPNASHQVGVGAFVLNDRGEVLAVQEGNGPLKGKGAWKMPTGIVSTGEDLHEGACREVLEETGIDAEFQAVLAVRQAHGFGFGKSDLFFVCAMRPKPG--PQELKPCETEIETAAWIPLEEF 218
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BLAST of mRNA_P-fluviatile_contig72.13849.1 vs. uniprot
Match: A0A7S3HM02_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HM02_9STRA)

HSP 1 Score: 218 bits (555), Expect = 1.210e-62
Identity = 108/215 (50.23%), Postives = 149/215 (69.30%), Query Frame = 3 
Query:  117 MLKYTTDHYDGVIVDEASLKLHDSVDEFKALLATSLEAWRSDGKKGVWLKVPAHRTELVPVSIDLGFELHHAEKAYIMLNMWLPPTENQLPGNASHQVGVGAVVLNDDGDMLVVREKNGPLRGTGIWKLPTGLIDAGEDLPNAAAREVLEETGVETEFDSVLAFRHGHRGLFGKSDLFFVVRMQLKPGFDPYALRPQESEIEECMWMSRKQFAKQ 761
            +L +T D YDGVI+   +L     V  F+ +L +S++ W+ + ++GVWLKVP  ++ LV  +++ GF  HHAEK Y+M+N WL   EN++P NASHQVGVG +V+N+ G +L+V+EKNGPLRGTG+WK+PTGL D GEDL  AA REV EETG+ETEF S++  R  H  LFGKSDLFFV    LKP      ++P  +EI  C W++ + + +Q
Sbjct:   51 VLNHTVDRYDGVIISSKALPT--DVVSFQTILGSSIQFWKENRRRGVWLKVPIEKSVLVAPAVEAGFVFHHAEKDYVMMNHWLSEDENRMPLNASHQVGVGCIVINN-GKLLMVQEKNGPLRGTGVWKMPTGLSDPGEDLYEAAVREVFEETGIETEFVSIINIRQSHTALFGKSDLFFVCL--LKPKNTTITMQP--AEIAACEWVNAEVYLQQ 258
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig72.13849.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FYW6_ECTSI2.830e-12779.83Nudix hydrolase domain-containing protein n=1 Tax=... [more]
A0A2P6TQS8_CHLSO4.210e-6652.49Nudix hydrolase 8 n=1 Tax=Chlorella sorokiniana Ta... [more]
A0A7S3VTM7_DUNTE2.120e-6550.65Hypothetical protein n=1 Tax=Dunaliella tertiolect... [more]
A0A1Y1IAP3_KLENI2.850e-6549.79Nudix hydrolase homolog n=1 Tax=Klebsormidium nite... [more]
E1Z7H0_CHLVA7.980e-6448.60Nudix hydrolase domain-containing protein (Fragmen... [more]
A0A5J4Y3E2_9CHLO1.030e-6350.23Nudix hydrolase 2-like n=1 Tax=Trebouxia sp. A1-2 ... [more]
A0A2P6VEC6_9CHLO1.930e-6347.90Nudix hydrolase 8 n=1 Tax=Micractinium conductrix ... [more]
A0A7J7PRR4_9CHLO2.540e-6351.39NUDIX hydrolase domain-like protein n=1 Tax=Scened... [more]
A0A061R3E1_9CHLO4.400e-6351.40Nudix hydrolase 2-like n=1 Tax=Tetraselmis sp. GSL... [more]
A0A7S3HM02_9STRA1.210e-6250.23Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig72contigP-fluviatile_contig72:72056..76994 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score384.8
Seed ortholog evalue3.8e-104
Seed eggNOG ortholog2880.D7FYW6
KEGG rclassRC00005
KEGG koko:K13648
KEGG ReactionR05191
KEGG Pathwayko00520,map00520
GOsGO:0000166,GO:0003674,GO:0003824,GO:0004551,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005886,GO:0006950,GO:0006979,GO:0008150,GO:0009605,GO:0009607,GO:0009611,GO:0009966,GO:0009967,GO:0010646,GO:0010647,GO:0016020,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0023051,GO:0023056,GO:0035529,GO:0036094,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044424,GO:0044444,GO:0044464,GO:0047631,GO:0048037,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050662,GO:0050789,GO:0050794,GO:0050896,GO:0051287,GO:0051704,GO:0051707,GO:0065007,GO:0071944,GO:0080151,GO:0097159,GO:1901265,GO:1901363,GO:2000031,GO:2001023,GO:2001025,GO:2001038,GO:2001040
EggNOG free text desc.8-hydroxy-dADP phosphatase activity
EggNOG OGsKOG0648@1,KOG0648@2759
EC2.4.1.43
COG Functional cat.L
CAZyGT8
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01003
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionNUDIX hydrolase domain
Ec32 orthologEc-19_002730.1
Exons6
Model size1596
Cds size939
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig72.13849.1prot_P-fluviatile_contig72.13849.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig72 72597..76878 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817163.0794513-UTR-P-fluviatile_contig72:72055..725961622817163.0794513-UTR-P-fluviatile_contig72:72055..72596Porterinema fluviatile SAG_2381UTRP-fluviatile_contig72 72056..72596 -
1693571328.2910492-UTR-P-fluviatile_contig72:72055..725961693571328.2910492-UTR-P-fluviatile_contig72:72055..72596Porterinema fluviatile SAG_2381UTRP-fluviatile_contig72 72056..72596 -
1622817163.1720095-UTR-P-fluviatile_contig72:76878..769941622817163.1720095-UTR-P-fluviatile_contig72:76878..76994Porterinema fluviatile SAG_2381UTRP-fluviatile_contig72 76879..76994 -
1693571328.3686173-UTR-P-fluviatile_contig72:76878..769941693571328.3686173-UTR-P-fluviatile_contig72:76878..76994Porterinema fluviatile SAG_2381UTRP-fluviatile_contig72 76879..76994 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817163.0927715-CDS-P-fluviatile_contig72:72596..729441622817163.0927715-CDS-P-fluviatile_contig72:72596..72944Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 72597..72944 -
1693571328.302083-CDS-P-fluviatile_contig72:72596..729441693571328.302083-CDS-P-fluviatile_contig72:72596..72944Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 72597..72944 -
1622817163.1063683-CDS-P-fluviatile_contig72:73424..736211622817163.1063683-CDS-P-fluviatile_contig72:73424..73621Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 73425..73621 -
1693571328.3103368-CDS-P-fluviatile_contig72:73424..736211693571328.3103368-CDS-P-fluviatile_contig72:73424..73621Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 73425..73621 -
1622817163.1190736-CDS-P-fluviatile_contig72:74407..744461622817163.1190736-CDS-P-fluviatile_contig72:74407..74446Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 74408..74446 -
1693571328.3200524-CDS-P-fluviatile_contig72:74407..744461693571328.3200524-CDS-P-fluviatile_contig72:74407..74446Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 74408..74446 -
1622817163.1315682-CDS-P-fluviatile_contig72:75080..751931622817163.1315682-CDS-P-fluviatile_contig72:75080..75193Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 75081..75193 -
1693571328.3342323-CDS-P-fluviatile_contig72:75080..751931693571328.3342323-CDS-P-fluviatile_contig72:75080..75193Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 75081..75193 -
1622817163.1439092-CDS-P-fluviatile_contig72:76048..761401622817163.1439092-CDS-P-fluviatile_contig72:76048..76140Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 76049..76140 -
1693571328.3484719-CDS-P-fluviatile_contig72:76048..761401693571328.3484719-CDS-P-fluviatile_contig72:76048..76140Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 76049..76140 -
1622817163.1557221-CDS-P-fluviatile_contig72:76728..768781622817163.1557221-CDS-P-fluviatile_contig72:76728..76878Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 76729..76878 -
1693571328.3587492-CDS-P-fluviatile_contig72:76728..768781693571328.3587492-CDS-P-fluviatile_contig72:76728..76878Porterinema fluviatile SAG_2381CDSP-fluviatile_contig72 76729..76878 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig72.13849.1

>prot_P-fluviatile_contig72.13849.1 ID=prot_P-fluviatile_contig72.13849.1|Name=mRNA_P-fluviatile_contig72.13849.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=313bp
MLKYTTDHYDGVIVDEASLKLHDSVDEFKALLATSLEAWRSDGKKGVWLK
VPAHRTELVPVSIDLGFELHHAEKAYIMLNMWLPPTENQLPGNASHQVGV
GAVVLNDDGDMLVVREKNGPLRGTGIWKLPTGLIDAGEDLPNAAAREVLE
ETGVETEFDSVLAFRHGHRGLFGKSDLFFVVRMQLKPGFDPYALRPQESE
IEECMWMSRKQFAKQTAESGTVLLREITKVMEAHLASEQLGEAADAGADA
GTGEWRRASAPANGGGVGGEEGREDGACRRAKRRRHAAAFTARMLESSRK
YGGKSMLYHGKL*
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mRNA from alignment at P-fluviatile_contig72:72056..76994-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig72.13849.1 ID=mRNA_P-fluviatile_contig72.13849.1|Name=mRNA_P-fluviatile_contig72.13849.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4939bp|location=Sequence derived from alignment at P-fluviatile_contig72:72056..76994- (Porterinema fluviatile SAG_2381)
GTGCTACAGGAGGCGAAGCGAAACCACTAGCCCCACCGCCCCCGGCGTCG
CCCGTGAGCAATCCAGCCAATCCTTCGCAGCGGCAGCGCCATCAGCGGCT
ACAGCAAAAGGCGACAATGCTCAAGTACACGACCGATCACTACGACGGCG
TGATAGTCGACGAGGCCAGCCTCAAGCTCCACGACAGCGTCGATGAGTTC
AAGGCCTTGCTAGCGACCTCGCTCGAGGCCTGGAGATCCGACGGGAAGAA
GGGTGTGTGGCTCAAGGTGTGACCTGCACTCTGCCATCTGCGTACGTGTG
TATTGAGTGCGTTCGTGCGTGCTACTTCTCAAGCATGTATTTTCTTTTTC
TTTTGCGACAACGGCGGACCGTCGTCGTCCCCGCTCGGGTGGGAAGAGAT
TGCAAGCAGGCTTTCGCCCTTTGCTACCATTCTCCATAGTCGTTGGCAGG
CGGTGTTTGTCTCAGGGCGCGGAATCACGCGTGCATCTTGGAAGCTCCGA
TGTTGATGTATTTCGGCTTCAGCAGAAAGACGCCGTCATTGAACAGCCAA
GAGGGCCGTGTCGACACGTGCTTGCGGATCGACCGGCTGTTTTCGGTAGC
AAAACGCTGCGGGATCAACACGAAACCGCTGGATGCACGTTTCGGGTCAA
CCTTTATGCCTCGCGTGCTGGAAGAAATCTGCGTCTCCTCCTACTAAGAG
CCCTGGGCGCATACCCCAGCATATTGTCGATGGCCTTGGTGTCTGACAGG
AGATGGAGGAATTCGCCCGGGGTTATTTCCGTATGGTAAAGTATTCTCGC
GACGCAAAAACCTGCTACTATGCCTCGGCGCCGAACCCCTCGTGGCTCGA
TCAGGTGCCGGCACACAGGACGGAGCTCGTCCCTGTCTCGATCGACCTCG
GTTTCGAACTTCACCACGCCGAAAAGGCATACATCATGCTCAACATGTGA
GTTGAGCCTTCAATGGGGAGTACCCGGCGGAACAGAGAGGAGCACTCGGA
CCGAATGGTGCCCTTTTTTCTAGCTTTCGTGTCAGCAGACGGCGTGTGTC
CGAGGCCAGTGGCGTTCGGTTTCTATGTAGAGTGTTTTGCACGTTGGGAC
AAATCCACGGTACGTAGAACTGTGGTCGCCTTGCCTCGTTCGCTTTGCTA
TTCCCTTGACCACATTGCCGGAGGTTGTGTCCTTCCAATGTTTTCTATAT
ACCGCCCTTTGTTTCGCCCTGTGGTGTGGAGTAATCGGTATGCGTGCCTT
GGATGATGGCACACAGAAGCATTTTTTCAAGGGCCTCTCACTCTCCAGGG
TTGGCTTTGTTATTCTCAAAATAATGTTGCGTGTAGCCCTCACCATAACT
TGTTGTGAGATGCCCTCCGCCACCCTTGCTACCACCACTACACCGTGTAC
GACACGTTGTGGACGAAAAGTCTGCGCTTTTCACGAATCGTAATCTCCAT
CTTAACATTGGAAGTACCCGTTGAATATCAAAACCGTGAGCCGGCGGCGC
GTTGGATCACCCCACGCCACTGACAATTGGAGATCAAAATTACTTATGCA
TTACACGGCACCGCGAACCAATCGTCGAACAGCGGATCGGAAGTTTGAGC
TTTTAAGTGTTATTGCTGCTGCCGTTTTGCTTGGTTTTTCGTACTTGTGA
TTGTTGTTGTCGTTCTTGTCGGTGTTTCTCGCAGAGTCGTCGCCACTGGA
GTCTCGTCTCATCTTCACTCGTCTTGAGTCTCTCGATGCGCATCCCGGTT
TGCCTCTCCGGCGCGTGAAACGTCAACTACTCTCTCGGCCTTGTCGCGTA
GGTGGCTGCCTCCTACGGAGAATCAGCTTCCAGGGAACGCTAGCCATCAG
GTTGGTGTGGGTGCGGTCGTTCTCAACGACGACGGAGACATGCTCGTTGT
GCGGGAAAAGAACGGTGAGCTTGTGTGCGTTGCAGCAACTTTTGTTTATC
ATGAAAACCCATGGGTTGTGAATATTACTAAGCTTGAATGCGTGAGCTCT
CTCCTTGACCTGGGTAAGGGTCGCACGTGTTTCTCAAAGCGCGTGCTCCT
CTTGCGGGCCTTTAAGAGCAACACGTTGAAGGTCCGCCTAGCGTGTACAA
TTTTTAATACTGCGAAAGGGTGCATTATCGCAAATCTTCAAAGGCCACGG
CGGTCAGATTAAGTGCGAGATGAACCAGTGAGCAAGCGGGGTGGACGACA
AGTGGTATGTTTCATTGAACCCGCGTTCCGGTTTGCTGCAGGGTGGGCGA
GTGGGTGGGTGGGGCTGGGGCCTGTCCTCGCGTGTGATCGGTCCGCTTCT
TCGGCCAGGTCAGCGCTGGGGTTCGCTGGATGGGCAAGCACGTGCCCATT
GCCACCCTCGCCCGAGCACTGCACCACGCCGTATCACCTTGTTGTTAATC
GACTCGGCCACGCTTTTCTCTCACCAGCGCTCACGTATATTGCAACAAAT
TTGTCGGCTGCCGCCGCTCCCGCTGCCGCTTTTGTTGCTGTTGCTACTGC
CACCGCTGCCACTGCCGCCGCTGTTGTTGTACGCCATGGGGGCCACAGGT
CCGTTACGAGGCACGGGCATTTGGAAGCTCCCGACCGGTGAGTGTGTGTG
GTGCTTCTTTTTCTCCCGAGTTCTAGTTGGGCTTGTCCCTGGTGATGCTG
ATGCTGTCTGTAGCTGTTCTTGCCGTATCTGTTGTTGTGCCATGTAGCTC
AACGCCGAAGGGAGAAAAGGGAAATTGTTTTGTTCACCAAGCCCATCAGG
CTGCCCCTCTTGAATATTGCGCTTCATGCACCGCGCACTCTTGATCCGCT
TTGACTATCGGATGCTGTAGCCAACGCCCCTCCGGACTTGCGAGAGTGGC
GCATCGTTATCGCCTTCCTATTAAGGAGCGTGTAGGGGCGGAGGGACGAC
GAGCGGGAGGGTTTGTATGCTGCTCTTGGGTATGGAATGTTCGTGTTTGC
AGATCGTTTAGTAGTCGAGGGGTGATGATTGTGGGACAAATTGCTATTCA
CGAGACGGATGAGTTGGCAAAGCCGTTTTCTTCAATATTGCGCCATCGCA
CCCCCCCCCATCCCCTATGTTTTATGTCCTAGGTCGCCTTTATTACACCG
TCCTTGTTCAAGTGAAACGATCTCGTCTGGCGTGTGACATTGTGGGCCTC
CTTCCAAAAACCCCGATGCTGACAATCAAAATCCAACCTAATTGAAACGA
CAAACGGACACTTACGTTCGCTCCTCCCCACGTACCCTTCTCCTCCCACG
TCGATTCTCCGCCCCCCCCAAGAAACGGCAGCAGGCATGCAGTCATGACG
CTGTCACGTGCCTCACATAATCCCGCGCTGATCGTGTTGTTATTATTTGT
CGTGTTCAAACAAACCTCGTCAGGTTTGATCGATGCCGGCGAGGATTTGC
CGAATGCGGCGGCTAGGGAGGTGCTCGAAGAGACGGGTGTCGAAACGGAG
TTCGACTCTGTGCTAGCGTTCCGCCACGGACACCGTGGGCTTTTTGGAAA
GAGCGACCTTTTTTTCGTCGTCAGGATGCAGTTGAAACCCGGTTTCGATC
CGTACGCTCTACGGCCGCAGGTAAGACAAGGCCGGCTGTAGCTACCTTTT
TCTTGGACTTTCTTGCGCTTTTGTCCGCAGTGGCAAACGGATGAGGCTTG
TTCGTTCCAGCAGGATCCCCCGCGTAATAAATTCCAGTGTTCTTCTCAAA
TTCAGCGCAGCCATTGCCCTTCTGTTCGTCGTAGACCTTGAAACTGTTTT
CCTGTGTTGAGTAGTTAAGACGGGGCTTGCGGTTTGTCCATCCCATGGTC
GACCCGTGACTCGGGTGACGTCGAGTACATTTTCCCCCCCGTTGAGGGAA
GGAGCTTCGGTCCTTGGCCTACTCCTTTGTCACCCCTGGTCCCAAACTCT
CTCAATCAGTCCTCTCGTTCAAGTCATCTCGCAGATGCTGCCTCCGACAA
CTCCAACAGAACATACAAGTTTTGAGACATAAAAACACTTGCCGTCCAGT
GTATCCGACACACAAGTCACGTGCAAGGACACTCCACAAACGACGCGCAG
GAATCCGAGATCGAGGAGTGCATGTGGATGTCGCGCAAGCAGTTTGCCAA
ACAGACCGCCGAGTCCGGCACGGTTCTGCTGCGAGAGATAACCAAGGTCA
TGGAGGCCCATCTGGCCTCAGAACAGCTGGGCGAAGCGGCTGATGCGGGA
GCGGATGCAGGTACAGGAGAGTGGCGAAGAGCTTCAGCACCCGCGAATGG
TGGCGGTGTCGGAGGCGAGGAAGGGCGAGAGGACGGGGCTTGTAGAAGGG
CAAAGCGGCGGAGGCACGCTGCCGCTTTCACCGCGAGGATGCTCGAGTCG
TCGCGAAAGTACGGCGGCAAGAGCATGCTTTACCATGGGAAACTGTAGAA
AAGTGTGGAGTACGCCCGGACTCCGTTATATCCTGCACCGGAGTTGTTGG
TTGCTATCGTGAGCCATGCTGCATTCTTCGTGATGCGGCGGGCGGAAATG
ACGGTGAGGGAGAGGACGCGTACGGTGTGAAGGAGGGTTCGGGGCAATTG
TTGTGTGTTGGCGTATGGAGGACTGCTAATATCCTCCTGATGTTTGTCCC
CTTTGTTTTGGGAGTGCTCGTATGCCGCCTCCCTTGTTCGGGAATGCAGC
GCCAGTGACTTATACCTAGCCGGGCAAAAGGTCATGATCGGAAGCATTTT
GACAGGTTGAATAATATGTTGTTACTTGAAGTGCATTGTGACGTTGCGAA
GACATGATCGTGCCATGTCGCCGAGATGAAATCGGCGCTAGGGGCCGGGG
AGGAGGAAGACTATGCAGATATGTAACGATTTTCGTGCATCACCAGGAAA
CATGCATGACGAACACCACCAAACCTTTCTACGCTCCGCTGGCGTACAAT
GAAGTCTTTGTTTGCCGACATCCGGCGCTGCTACGCTAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig72:72056..76994-

>mRNA_P-fluviatile_contig72.13849.1 ID=mRNA_P-fluviatile_contig72.13849.1|Name=mRNA_P-fluviatile_contig72.13849.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1878bp|location=Sequence derived from alignment at P-fluviatile_contig72:72056..76994- (Porterinema fluviatile SAG_2381)
ATGCTCAAGTACACGACCGATCACTACGACGGCGTGATAGTCGACGAGGC
CAGCCTCAAGCTCCACGACAGCGTCGATGAGTTCAAGGCCTTGCTAGCGA
CCTCGCTCGAGGCCTGGAGATCCGACGGGAAGAAGGGTGTGTGGCTCAAG
ATGCTCAAGTACACGACCGATCACTACGACGGCGTGATAGTCGACGAGGC
CAGCCTCAAGCTCCACGACAGCGTCGATGAGTTCAAGGCCTTGCTAGCGA
CCTCGCTCGAGGCCTGGAGATCCGACGGGAAGAAGGGTGTGTGGCTCAAG
GTGCCGGCACACAGGACGGAGCTCGTCCCTGTCTCGATCGACCTCGGTTT
CGAACTTCACCACGCCGAAAAGGCATACATCATGCTCAACATGTGCCGGC
ACACAGGACGGAGCTCGTCCCTGTCTCGATCGACCTCGGTTTCGAACTTC
ACCACGCCGAAAAGGCATACATCATGCTCAACATGTGGCTGCCTCCTACG
GAGAATCAGCTTCCAGGGAACGCTAGCCATCAGGTTGGTGTGGGTGCGGT
CGTTCTCAACGACGACGGAGACATGCTCGTTGTGCGGGAAAAGAACGGTG
GCTGCCTCCTACGGAGAATCAGCTTCCAGGGAACGCTAGCCATCAGGTTG
GTGTGGGTGCGGTCGTTCTCAACGACGACGGAGACATGCTCGTTGTGCGG
GAAAAGAACGGTCCGTTACGAGGCACGGGCATTTGGAAGCTCCCGACCGG
TCCGTTACGAGGCACGGGCATTTGGAAGCTCCCGACCGGTTTGATCGATG
CCGGCGAGGATTTGCCGAATGCGGCGGCTAGGGAGGTGCTCGAAGAGACG
GGTGTCGAAACGGAGTTCGACTCTGTGCTAGCGTTCCGCCACGGACACCG
TGGGCTTTTTGGAAAGAGCGACCTTTTTTTCGTCGTCAGGATGCAGTTGA
AACCCGGTTTCGATCCGTACGCTCTACGGCCGCAGGTTTGATCGATGCCG
GCGAGGATTTGCCGAATGCGGCGGCTAGGGAGGTGCTCGAAGAGACGGGT
GTCGAAACGGAGTTCGACTCTGTGCTAGCGTTCCGCCACGGACACCGTGG
GCTTTTTGGAAAGAGCGACCTTTTTTTCGTCGTCAGGATGCAGTTGAAAC
CCGGTTTCGATCCGTACGCTCTACGGCCGCAGGAATCCGAGATCGAGGAG
TGCATGTGGATGTCGCGCAAGCAGTTTGCCAAACAGACCGCCGAGTCCGG
CACGGTTCTGCTGCGAGAGATAACCAAGGTCATGGAGGCCCATCTGGCCT
CAGAACAGCTGGGCGAAGCGGCTGATGCGGGAGCGGATGCAGGTACAGGA
GAGTGGCGAAGAGCTTCAGCACCCGCGAATGGTGGCGGTGTCGGAGGCGA
GGAAGGGCGAGAGGACGGGGCTTGTAGAAGGGCAAAGCGGCGGAGGCACG
CTGCCGCTTTCACCGCGAGGATGCTCGAGTCGTCGCGAAAGTACGGCGGC
AAGAGCATGCTTTACCATGGGAAACTGTAGGAATCCGAGATCGAGGAGTG
CATGTGGATGTCGCGCAAGCAGTTTGCCAAACAGACCGCCGAGTCCGGCA
CGGTTCTGCTGCGAGAGATAACCAAGGTCATGGAGGCCCATCTGGCCTCA
GAACAGCTGGGCGAAGCGGCTGATGCGGGAGCGGATGCAGGTACAGGAGA
GTGGCGAAGAGCTTCAGCACCCGCGAATGGTGGCGGTGTCGGAGGCGAGG
AAGGGCGAGAGGACGGGGCTTGTAGAAGGGCAAAGCGGCGGAGGCACGCT
GCCGCTTTCACCGCGAGGATGCTCGAGTCGTCGCGAAAGTACGGCGGCAA
GAGCATGCTTTACCATGGGAAACTGTAG
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