mRNA_P-fluviatile_contig72.13847.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig72.13847.1 vs. uniprot
Match: A0A6H5KQ72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ72_9PHAE) HSP 1 Score: 511 bits (1315), Expect = 6.350e-178 Identity = 256/314 (81.53%), Postives = 277/314 (88.22%), Query Frame = 1
Query: 1 MSRPMDEEESSLLLILLDASPTFWTKREGARRSQNERPESGELKLSSFQDTVEATLMFVESYLMMHRQNEVCFVACTARESTIVFPTAETEREQRSLGSGSMSTKEFHDCLWEGLYHVVKKAHAAGEAG---EGCALAGGLSKGLCYVNRKLRESPSIQA---RALVLSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGGLYLEHRGVGIVPYMFSTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRVVEIAYVCSVCLSVFCEFSPVCTTCGTRAWPQKVARGRKRPAGGVGAPNGR 924
MSRPMDEEE SLLLI+LDAS FWTKRE RR Q +RPESGE+KLSSFQDTVEATLMFVESYLMMHR+NEVCFVACTARESTI+FPT EREQRSLG GS+STKEF +CLW+GL VV++ HAA AG EGCALAG LSKGLCYVN+K+RES SIQA RALVLSG+PDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGGLYLEH+GVG+ YMF+TFLPSQSCRKYLKLR QQSVDFRAACFCHKRVV+IAYVCSVCLSVFCEFSPVCTTCGTRAWP+K+ RG+ + G NGR
Sbjct: 1 MSRPMDEEEPSLLLIILDASSAFWTKREAVRRRQKQRPESGEVKLSSFQDTVEATLMFVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAADAAGGGDEGCALAGSLSKGLCYVNKKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKRGKHKALAGTTVANGR 314
BLAST of mRNA_P-fluviatile_contig72.13847.1 vs. uniprot
Match: D7FYW3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW3_ECTSI) HSP 1 Score: 353 bits (906), Expect = 2.330e-117 Identity = 181/223 (81.17%), Postives = 195/223 (87.44%), Query Frame = 1
Query: 1 MSRPMDEEESSLLLILLDASPTFWTKREGARRSQNERPESGELKLSSFQDTVEATLMFVESYLMMHRQNEVCFVACTARESTIVFPTAETEREQRSLGSGSMSTKEFHDCLWEGLYHVVKKAHAAGEAG---EGCALAGGLSKGLCYVNRKLRESPSIQARALVLSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGGLYLEHRGVGI 660
MSRPMDEEE SLLLI+LDAS FWTKRE RR Q ERPESGE+KLSSFQDTVEATLMFVESYLMMHR+NEVCFVACTARESTI+FPT EREQR+LG GS+STKEF DCLW+GL VV++ HAA EAG EGCALAG LSKGLCY+NRK+RES SIQARALVLSG+PDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTG + G G+
Sbjct: 1 MSRPMDEEEPSLLLIILDASSAFWTKREAVRRRQKERPESGEVKLSSFQDTVEATLMFVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRTLGRGSVSTKEFQDCLWDGLGRVVERGHAADEAGGGDEGCALAGSLSKGLCYINRKMRESSSIQARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGKGARKTTGTGM 223
BLAST of mRNA_P-fluviatile_contig72.13847.1 vs. uniprot
Match: A0A835ZC01_9STRA (Putative general transcription factor IIH subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC01_9STRA) HSP 1 Score: 269 bits (688), Expect = 1.270e-83 Identity = 134/289 (46.37%), Postives = 193/289 (66.78%), Query Frame = 1
Query: 19 EEESSLLLILLDASPTFWTKREGARRSQNERPESGELKLSSFQDTVEATLMFVESYLMMHRQNEVCFVACTARESTIVFPTAETEREQRSLGSGSMSTKEFHDCLWEGLYHVVKKAHAAGEAGEGCA------LAGGLSKGLCYVNRKLRESPSIQARALVLSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLGESSTFLQQAAYLTGGLYLEHRGVGIVPYMFSTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRVVEIAYVCSVCLSVFCEFSPVCTTCGTRAWPQ 867
+E+ SLL+++ DAS W ++ + + +FQ T+EA ++F++SYL+MHR+N++ VAC S +VFPT E++ SL +G +S+K C+ +GL ++ A A G A A +A LS+ LC+ +RK+ E+PS+Q R LV+ PD PE+YN+VMN IFSAQKA + VDC +G S F+QQAA +TGG+Y + ++ + + LPSQ+CRKYL+ + Q++VDFRAACFCH+R++EIAYVCSVCLSVFCEFSP+C TCGTRA P+
Sbjct: 2 DEDPSLLVVVFDASQGAWAAKDALAAQGS--------TVGTFQGTLEAMMVFLQSYLLMHRRNDIAVVACGEAGSRMVFPTPAIEKDNVSLATGGVSSKRVQSCIVDGLRELMS-ASACGTASVQPAVSSKAPIAKALSQALCFTHRKITENPSVQTRLLVVQAGPDAPESYNAVMNCIFSAQKAQIPVDCLCVGPDSVFMQQAADVTGGVYCHVQEPNVLQQLLTLILPSQACRKYLRTKGQETVDFRAACFCHRRLIEIAYVCSVCLSVFCEFSPICATCGTRAVPK 281
BLAST of mRNA_P-fluviatile_contig72.13847.1 vs. uniprot
Match: A0A5D6XQC8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQC8_9STRA) HSP 1 Score: 220 bits (561), Expect = 2.090e-64 Identity = 129/304 (42.43%), Postives = 179/304 (58.88%), Query Frame = 1
Query: 16 DEEESSLLLILLDASPTFWTKREGARRSQNERPESGELKLSSFQDTVEATLMFVESYLMMHRQNEVCFVACTARESTIVFPTAETEREQRSLGSGSMSTKEFHDCLWEGLYHVVKKAHAAGEAG------EGCALAGGLSKGLCYVNRKLRESPSIQARALVLSGAPDVPETYNSVMNAIFSAQKAGVLVD-CAVLGESSTFLQQAAYLTGGLY---LEHRGVGIVPYMFSTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRVVEIAYVCSVCLSVFCEFSPVCTTCGTRA--WPQKVARGRKR 891
D LL+++LD +P +W AR + G+ S+FQ V +TL+FV +YL++HR N + VA A + +++P AE +Q + GS S K V++K A G A A+A LS+ LC++NR +RE ++ R LV+ +PDV + Y S+MN IFSAQK V VD C + E S+FLQQAAYLTGG+Y ++H G ++ Y+ S +LP S RK LKL Q SVDFRA CFCHK V+ A+VC VCLS+FCEF P+C+TCG R+ P K + +KR
Sbjct: 23 DAVSEGLLVLVLDTNPRYWFAEGQAR-------DGGD---SAFQQLVASTLVFVNAYLLLHRSNRIVVVAAHAGRAEMLYPDAE---QQDTSGSAEQSAKVNTS--------VLQKLRALGNAPIDASKPNATAIAASLSRALCFINRAIREQSDLRPRVLVIQKSPDVAQHYISIMNGIFSAQKKSVAVDACVLASEHSSFLQQAAYLTGGIYYKPIDHSG--LLQYLLSIYLPDPSMRKLLKLPSQDSVDFRAMCFCHKEVISTAFVCPVCLSLFCEFQPICSTCGIRSRIQPAKKLQQKKR 303
BLAST of mRNA_P-fluviatile_contig72.13847.1 vs. uniprot
Match: H3GBC5_PHYRM (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=H3GBC5_PHYRM) HSP 1 Score: 211 bits (537), Expect = 5.640e-61 Identity = 115/291 (39.52%), Postives = 168/291 (57.73%), Query Frame = 1
Query: 34 LLLILLDASPTFWTKREGARRSQNERPESGELKLSSFQDTVEATLMFVESYLMMHRQNEVCFVACTARESTIVFPTAETEREQRSLGSGSMSTKEFHDCLWEGLYHVVKKAHAAGEAGEGCALAGGLSKGLCYVNRKLRESPSIQARALVLSGAPDVPETYNSVMNAIFSAQKAGVLVD-CAVLGESSTFLQQAAYLTGGLYLEHRGV-GIVPYMFSTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRVVEIAYVCSVCLSVFCEFSPVCTTCGTRAWPQKVARG--RKRP 894
LL++++D SP W + G G + Q + +TL+FV SYL++HR N + +A A +S +++P + EQ + + + + + L + + A+A +S+ LC++NR + E P ++ R LV+ +PDV E Y ++MN IFSAQK V VD C + E S+F+QQAAYLTGG+Y + G G++ Y+ S +LP S RK LKL Q SVDFRA CFCH+ V+ AYVC VCLS+FCEF P+C+TCG R+ Q G +KRP
Sbjct: 21 LLVLVVDTSPVHWFAQGG-----------GAADRAGLQQLISSTLVFVNSYLLLHRSNRIVIIAAHAGKSAMLYP----DPEQEDTSGNAEQAAKVNAGVMQRLQQLSDAPLDPAKPNR-TAIAASISRALCFINRAINEEPDLRPRILVVQKSPDVSEHYIAIMNGIFSAQKKSVAVDACILAAEHSSFMQQAAYLTGGIYYKPNGPSGLLQYLISIYLPDPSMRKLLKLPSQDSVDFRAMCFCHREVISTAYVCPVCLSLFCEFRPICSTCGIRSHIQPKKNGVLKKRP 295
BLAST of mRNA_P-fluviatile_contig72.13847.1 vs. uniprot
Match: A0A421GZV4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GZV4_9STRA) HSP 1 Score: 209 bits (531), Expect = 4.210e-60 Identity = 118/296 (39.86%), Postives = 166/296 (56.08%), Query Frame = 1
Query: 19 EEESSLLLILLDASPTFWTKREGARRSQNERPESGELKLSSFQDTVEATLMFVESYLMMHRQNEVCFVACTARESTIVFPTAETEREQRSLGSGSMSTKEFHDCLWEGLYHVVKKAHAAGEAGEGCALAGGLSKGLCYVNRKLRESPSIQARALVLSGAPDVPETYNSVMNAIFSAQKAGVLVD-CAVLGESSTFLQQAAYLTGGLYLEHRG-VGIVPYMFSTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRVVEIAYVCSVCLSVFCEFSPVCTTCGTRAW--PQKVARGRKRP 894
E LL++++D +P W EGA G + Q + +TL+FV SYL++HR N + +A A +S +++P E S + L E + A A+A LS+ LC++NR + E P ++ R LV+ +PD+ E Y ++MN IFSAQK V VD C + E S+F+QQAAYLTGG+Y + G++ Y+ S +LP S RK LKL Q SVDFRA CFCH+ V+ AYVC VCLS+FCEF P+C+TCG R+ P+K +KRP
Sbjct: 15 EASEGLLVLVIDTNPVHWFA-EGA----------GPADRAGLQQLISSTLVFVNSYLLLHRSNRIVIIAAHAGKSAMLYPDPNQEDTSGSAEQAAKVNAGVMQRLQE-----LSDAPLDPAKPNRTAIAAALSRSLCFINRAINEEPELKPRILVIQKSPDMSEHYIAIMNGIFSAQKRSVAVDACILASEQSSFMQQAAYLTGGIYYKPNDHSGLLQYLISIYLPDPSTRKLLKLPSQDSVDFRAMCFCHREVISTAYVCPVCLSLFCEFRPICSTCGIRSHIQPKKNGLMKKRP 294
BLAST of mRNA_P-fluviatile_contig72.13847.1 vs. uniprot
Match: K3WG36_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WG36_GLOUD) HSP 1 Score: 209 bits (532), Expect = 4.650e-60 Identity = 123/304 (40.46%), Postives = 176/304 (57.89%), Query Frame = 1
Query: 13 MDEEESSLLLILLDASPTFWTKREGARRSQNERPESGELKLSSFQDTVEATLMFVESYLMMHRQNEVCFVACTARESTIVFPTAETEREQRSLGSGSMSTKEFHDCLWEGLYHVVKKAHAAGEAG------EGCALAGGLSKGLCYVNRKLRESPSIQARALVLSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLG-ESSTFLQQAAYLTGGLYLEHRG-VGIVPYMFSTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRVVEIAYVCSVCLSVFCEFSPVCTTCGTRAWPQ---KVARGRKR 891
+D + LL++++D +P +W E +R G +FQ V +TL+FV SYL++HR N + +A A ++ +++P + + GS S K V++K A E A+A +S+ LC++NR + E ++ R LV+ +PDV E Y S+MN IFSAQK GV VD VL + S+FLQQAAYLTGG+Y + G++ Y+ S +LP S RK LKL Q SVDFRA CFCHKRV+ A+VC VCLS+FCEF P+C+TCG R+ Q K+ + +KR
Sbjct: 26 IDVVQEGLLVLVVDTNPQYWFVNE-------QRSGGGP---QAFQQLVASTLVFVNSYLLLHRSNRIVIIAAHAGKAEMLYPDPN---QGDTSGSAEQSAKVNAK--------VMQKLQALSELPVDPAKPNATAIAASISRALCFINRAINEQSDLRPRILVIQKSPDVSEHYISIMNGIFSAQKKGVAVDACVLARDQSSFLQQAAYLTGGIYYKPNDHSGLLQYLLSIYLPDPSMRKLLKLPSQDSVDFRAMCFCHKRVISTAFVCPVCLSLFCEFQPICSTCGIRSRIQPAKKMQQQKKR 308
BLAST of mRNA_P-fluviatile_contig72.13847.1 vs. uniprot
Match: F0WU60_9STRA (General transcription factor IIH subunit putative n=2 Tax=Albugo TaxID=65356 RepID=F0WU60_9STRA) HSP 1 Score: 208 bits (529), Expect = 6.350e-60 Identity = 116/302 (38.41%), Postives = 183/302 (60.60%), Query Frame = 1
Query: 13 MDEEESSLLLILLDASPTFWTKR-EGARRSQNERPESGELKLSSFQDTVEATLMFVESYLMMHRQNEVCFVACTARESTIVFPTAETEREQRSLGSGSMSTKEFHDCLWEGLYHVVKKAHAAGEAGEGCALAGGLSKGLCYVNRKLRESPSIQARALVLSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLGES-STFLQQAAYLTGGLYLEHRGV-GIVPYMFSTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRVVEIAYVCSVCLSVFCEFSPVCTTCGTRAW---PQKVARGRKRPAG 900
M++ ++ L+++LD +P+ W + +G Q++ S FQ TV++ L+FV SYL+++R N + +A A S ++P A +E E S + + + + L + ++ H +++G +S+GLC +NR L+E+ + R V+ +PDVPE Y S+MN+IFSAQK V +D +L E S F+QQA YLTGG+Y + R + G++ Y+ + +LP + RK L+ Q+SVDFRA CFCHK+ V A+VC VCLS+FC+F P+C+TCG R+ P+K+A KRP G
Sbjct: 1 MEQTGAAFLVLILDTNPSHWWRNVDGMPTDQSD---------SLFQRTVKSVLIFVSSYLLLNRSNRLILLAAHAGSSVTLYPDALSESESESGDQIGL----IRNIVLKNLLALSEQTHDVTSKST-TSISGSISRGLCCMNRVLKENAQLCPRIFVIQRSPDVPEHYISIMNSIFSAQKKTVAIDACILSEEHSPFMQQATYLTGGIYYKPRVIDGLLQYLITLYLPDPNMRKMLRFPSQESVDFRAMCFCHKKAVSTAFVCPVCLSLFCQFQPICSTCGVRSRLSIPRKLAT-PKRPRG 287
BLAST of mRNA_P-fluviatile_contig72.13847.1 vs. uniprot
Match: A0A662YF30_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YF30_9STRA) HSP 1 Score: 207 bits (527), Expect = 2.070e-59 Identity = 115/296 (38.85%), Postives = 171/296 (57.77%), Query Frame = 1
Query: 34 LLLILLDASPTFWTKREGARRSQNERPESGELKLSSFQDTVEATLMFVESYLMMHRQNEVCFVACTARESTIVFPTAETEREQRSLGSGSMSTKEFHDCLWEGLYHVVKKAHAAGEAG------EGCALAGGLSKGLCYVNRKLRESPSIQARALVLSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLG-ESSTFLQQAAYLTGGLYLEHRGVG-IVPYMFSTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRVVEIAYVCSVCLSVFCEFSPVCTTCGTRA--WPQKVARGRKR 891
LL++++D +P W + G + ++FQ + +TL+FV SYL++HR N + +A A +S +++P + + + GS + K V+++ G+A A+A LS+ LC++NR + + P ++ R LV+ APDV E Y ++MN IFSAQK V VD +L E S+F+QQAAYLTGG+Y + G ++ Y+ S +LP S RK LKL Q SVDFRA CFCH+ V+ A+VC VCLS+FCEF P+C+TCG R+ P K +KR
Sbjct: 28 LLVLVIDTNPLHWFAQGGGTSDR-----------TAFQQLISSTLVFVNSYLLLHRSNRIVIIAAHAGKSAMLYPDPD---QADTSGSAEQAAKVNAG--------VMRRLQELGDAELDPAKPNRTAIAASLSRSLCFINRAINDQPDLRPRILVIQKAPDVSEHYIAIMNGIFSAQKKSVAVDACILSAEHSSFMQQAAYLTGGIYYKPNDAGGLLQYLISIYLPDPSMRKLLKLPSQDSVDFRAMCFCHREVISTAFVCPVCLSLFCEFRPICSTCGIRSRIQPNKSGLPKKR 301
BLAST of mRNA_P-fluviatile_contig72.13847.1 vs. uniprot
Match: A0A8K1C5A8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5A8_PYTOL) HSP 1 Score: 208 bits (530), Expect = 2.550e-59 Identity = 121/307 (39.41%), Postives = 170/307 (55.37%), Query Frame = 1
Query: 13 MDEEESSLLLILLDASPTFWTKREGARRSQNERPESGELKLSSFQDTVEATLMFVESYLMMHRQNEVCFVACTARESTIVFPTAETEREQRSLGSGSMSTKEFHDCLWEGLYHVVKKAHAAGEAG------EGCALAGGLSKGLCYVNRKLRESPSIQARALVLSGAPDVPETYNSVMNAIFSAQKAGVLVDCAVLG-ESSTFLQQAAYLTGGLYLEHRG-VGIVPYMFSTFLPSQSCRKYLKLRKQQSVDFRAACFCHKRVVEIAYVCSVCLSVFCEFSPVCTTCGTRA--WPQKVARGRKRPAGG 903
++ LL+I++D +P W + +Q + SFQ + +TL+FV SYL++HR N + +A A S +++P + + G+ S K + V++K A E A+A +S+ LC++NR + E+ + R LV+ +PDV E Y S+MN IFSAQK V VD +L E S F+QQAAYLTGG+Y + G++ Y+ S +LP S RK LKL Q SVDFRA CFCH+ VV AYVC VCLS+FCEF P+C+TCG R+ P K KRP G
Sbjct: 63 IETSSEGLLVIVIDTNPQQWFANAKLQNAQTQ----------SFQQLISSTLVFVNSYLLLHRNNRIVIIAAHAGRSEMLYPDPA---QNDTSGTAEQSLKVTN--------RVMEKLKALSEIPMDPSKPNATAIAASISRSLCFINRAITENADLSPRILVIQKSPDVSEHYISIMNGIFSAQKKNVAVDACILSREHSPFMQQAAYLTGGIYYKPNDHSGLLEYLLSIYLPDPSLRKLLKLPTQDSVDFRAMCFCHQEVVSTAYVCPVCLSLFCEFKPICSTCGIRSRIQPSKKLPPSKRPKSG 348 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig72.13847.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig72.13847.1 >prot_P-fluviatile_contig72.13847.1 ID=prot_P-fluviatile_contig72.13847.1|Name=mRNA_P-fluviatile_contig72.13847.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=310bp MSRPMDEEESSLLLILLDASPTFWTKREGARRSQNERPESGELKLSSFQDback to top mRNA from alignment at P-fluviatile_contig72:43770..48229+ Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig72.13847.1 ID=mRNA_P-fluviatile_contig72.13847.1|Name=mRNA_P-fluviatile_contig72.13847.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4460bp|location=Sequence derived from alignment at P-fluviatile_contig72:43770..48229+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig72:43770..48229+ >mRNA_P-fluviatile_contig72.13847.1 ID=mRNA_P-fluviatile_contig72.13847.1|Name=mRNA_P-fluviatile_contig72.13847.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1860bp|location=Sequence derived from alignment at P-fluviatile_contig72:43770..48229+ (Porterinema fluviatile SAG_2381)back to top |