mRNA_P-fluviatile_contig71.13832.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig71.13832.1 vs. uniprot
Match: D8LRF1_ECTSI (C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRF1_ECTSI) HSP 1 Score: 96.7 bits (239), Expect = 6.560e-21 Identity = 48/64 (75.00%), Postives = 53/64 (82.81%), Query Frame = -2
Query: 3 MLITQWVGAAMEILDNRKENRFRLFEKCGMAMAVDSSGNDRINLEGLDTPCTCMSEEDSSDDEG 194
+LITQWVGAAME LD+R+E RFRLFEKCGMAM VD SG+DRI LEGLD P T + DSSDDEG
Sbjct: 528 VLITQWVGAAMEELDSREEYRFRLFEKCGMAMTVDGSGDDRITLEGLDKPYTFAGDGDSSDDEG 591
BLAST of mRNA_P-fluviatile_contig71.13832.1 vs. uniprot
Match: A0A6H5JS09_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS09_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 1.300e-18 Identity = 45/64 (70.31%), Postives = 51/64 (79.69%), Query Frame = -2
Query: 3 MLITQWVGAAMEILDNRKENRFRLFEKCGMAMAVDSSGNDRINLEGLDTPCTCMSEEDSSDDEG 194
+LITQWVGAAME LD+R+E FRLFEKCG+AM V SG+DRI LEGLD P T + DSSDDEG
Sbjct: 324 VLITQWVGAAMEELDSREEYLFRLFEKCGLAMTVGGSGDDRITLEGLDKPYTFAGDGDSSDDEG 387
BLAST of mRNA_P-fluviatile_contig71.13832.1 vs. uniprot
Match: A0A6H5JTC1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTC1_9PHAE) HSP 1 Score: 88.2 bits (217), Expect = 1.750e-18 Identity = 41/63 (65.08%), Postives = 53/63 (84.13%), Query Frame = -2
Query: 6 MLITQWVGAAMEILDNRKENRFRLFEKCGMAMAVDSSGNDRINLEGLDTPCTCMSEEDSSDDE 194
+LIT+W+GAAM L++++ R+RLFEKCGMAM VD SG+DRI L+GLD PCT ++EDSSDDE
Sbjct: 77 VLITRWMGAAMARLNSQQAYRYRLFEKCGMAMTVDGSGDDRITLKGLDKPCTFANDEDSSDDE 139
BLAST of mRNA_P-fluviatile_contig71.13832.1 vs. uniprot
Match: A0A6H5JEK5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEK5_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 2.860e-18 Identity = 40/64 (62.50%), Postives = 51/64 (79.69%), Query Frame = -2
Query: 3 MLITQWVGAAMEILDNRKENRFRLFEKCGMAMAVDSSGNDRINLEGLDTPCTCMSEEDSSDDEG 194
+LIT+W+GAAM L++++ RFRLFEKCGM M VD SG+DRI LEGLD P T ++ED S+DEG
Sbjct: 26 VLITRWIGAAMARLNSQQAFRFRLFEKCGMGMTVDGSGDDRITLEGLDKPYTFANDEDCSEDEG 89
BLAST of mRNA_P-fluviatile_contig71.13832.1 vs. uniprot
Match: A0A6H5KLU8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLU8_9PHAE) HSP 1 Score: 89.0 bits (219), Expect = 3.080e-18 Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = -2
Query: 6 MLITQWVGAAMEILDNRKENRFRLFEKCGMAMAVDSSGNDRINLEGLDTPCTCMSEEDSSDDE 194
+LITQW+GAAM LD+++ R+RLFEKCGMAM VD SG+DRI LEGLD P T ++EDSSDDE
Sbjct: 83 VLITQWMGAAMARLDSQQAYRYRLFEKCGMAMTVDGSGDDRITLEGLDKPYTFANDEDSSDDE 145
BLAST of mRNA_P-fluviatile_contig71.13832.1 vs. uniprot
Match: A0A6H5K7D5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7D5_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 5.480e-18 Identity = 41/63 (65.08%), Postives = 52/63 (82.54%), Query Frame = -2
Query: 6 MLITQWVGAAMEILDNRKENRFRLFEKCGMAMAVDSSGNDRINLEGLDTPCTCMSEEDSSDDE 194
+LITQW+GAAM L++++ R+RLFEKCGMAM VD SG+DR+ LEGLD P T + +EDSSDDE
Sbjct: 158 VLITQWMGAAMARLNSQQAYRYRLFEKCGMAMTVDGSGDDRMTLEGLDKPYTFVYDEDSSDDE 220
BLAST of mRNA_P-fluviatile_contig71.13832.1 vs. uniprot
Match: A0A6H5JXH0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXH0_9PHAE) HSP 1 Score: 87.8 bits (216), Expect = 8.320e-18 Identity = 44/64 (68.75%), Postives = 50/64 (78.12%), Query Frame = -2
Query: 3 MLITQWVGAAMEILDNRKENRFRLFEKCGMAMAVDSSGNDRINLEGLDTPCTCMSEEDSSDDEG 194
+LITQWVGAAME L++R+E RF LFEKCGMA VD SG+ RI LEGLD P T + DSSDDEG
Sbjct: 408 VLITQWVGAAMEELNSREEYRFHLFEKCGMAKTVDGSGDGRITLEGLDKPYTFAGDGDSSDDEG 471
BLAST of mRNA_P-fluviatile_contig71.13832.1 vs. uniprot
Match: A0A6H5JBK8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBK8_9PHAE) HSP 1 Score: 85.5 bits (210), Expect = 1.010e-17 Identity = 40/64 (62.50%), Postives = 52/64 (81.25%), Query Frame = -2
Query: 6 LMLITQWVGAAMEILDNRKENRFRLFEKCGMAMAVDSSGNDRINLEGLDTPCTCMSEEDSSDDE 197
+++ITQW+GAAM L++++ R+RLFEKCGMAM VD SG+DRI LEGLD P T ++ED SDDE
Sbjct: 55 VLIITQWMGAAMARLNSQQAYRYRLFEKCGMAMTVDGSGDDRITLEGLDKPYTFANDEDGSDDE 118
BLAST of mRNA_P-fluviatile_contig71.13832.1 vs. uniprot
Match: A0A6H5KL79_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KL79_9PHAE) HSP 1 Score: 82.4 bits (202), Expect = 1.200e-17 Identity = 39/63 (61.90%), Postives = 50/63 (79.37%), Query Frame = -2
Query: 6 MLITQWVGAAMEILDNRKENRFRLFEKCGMAMAVDSSGNDRINLEGLDTPCTCMSEEDSSDDE 194
+LITQW+GAAM L+ ++ R+R+FEKCGMAM VD SG+DRI LEGLD P T ++EDSS D+
Sbjct: 75 VLITQWMGAAMARLNRQQTYRYRIFEKCGMAMTVDGSGDDRITLEGLDKPYTFANDEDSSSDD 137
BLAST of mRNA_P-fluviatile_contig71.13832.1 vs. uniprot
Match: A0A6H5K7A3_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7A3_9PHAE) HSP 1 Score: 87.0 bits (214), Expect = 1.560e-17 Identity = 42/63 (66.67%), Postives = 52/63 (82.54%), Query Frame = -2
Query: 6 MLITQWVGAAMEILDNRKENRFRLFEKCGMAMAVDSSGNDRINLEGLDTPCTCMSEEDSSDDE 194
+LITQW+GAAM L++++ R+RLFEKCGMAM VD SG+DRI LEGLD P T ++EDSSDDE
Sbjct: 526 VLITQWMGAAMARLNSQQAYRYRLFEKCGMAMTVDGSGDDRITLEGLDKPYTFANDEDSSDDE 588 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig71.13832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig71.13832.1 >prot_P-fluviatile_contig71.13832.1 ID=prot_P-fluviatile_contig71.13832.1|Name=mRNA_P-fluviatile_contig71.13832.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=120bp APSSSLESSSLMQVHGVSKPSKLIRSLPELSTAIAMPHFSKRRNRFSLRLback to top mRNA from alignment at P-fluviatile_contig71:644086..644445+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig71.13832.1 ID=mRNA_P-fluviatile_contig71.13832.1|Name=mRNA_P-fluviatile_contig71.13832.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=360bp|location=Sequence derived from alignment at P-fluviatile_contig71:644086..644445+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig71:644086..644445+ >mRNA_P-fluviatile_contig71.13832.1 ID=mRNA_P-fluviatile_contig71.13832.1|Name=mRNA_P-fluviatile_contig71.13832.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=720bp|location=Sequence derived from alignment at P-fluviatile_contig71:644086..644445+ (Porterinema fluviatile SAG_2381)back to top |