mRNA_P-fluviatile_contig7.13661.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig7.13661.1 vs. uniprot
Match: D8LMD9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD9_ECTSI) HSP 1 Score: 266 bits (679), Expect = 1.660e-88 Identity = 128/177 (72.32%), Postives = 147/177 (83.05%), Query Frame = 1
Query: 1 ALDKYPVVTKSTSSGLIGLLGDVLAQSIGWVLWGGPPLWATPDALWRSCAVMLDGFFINGPLLHYAYEILEEYLPAEESLLAAVIQVGVDVFVIDPVFAFIFVWSTGLIEGRSVRHEILGTLEHDYPTMVLWLVVIGLCWAPLQIYLFNRYPVQFRVLTADLIDLVWTCVTSFFCHV 531
ALD YPV+TKS SSG IGLLGDVLAQ + ++ P W T +WRSCAVM+DG INGPLLHYAYE+LE +PA +S+LAA+ QV VDV VIDPVFAF+FVWSTGLIEGRSVR EIL T+ H YPT+VLWL+VIG+ WAP+QIYLFNRYPVQ+RVLTADLIDLVWTCV+S F HV
Sbjct: 9 ALDAYPVLTKSISSGFIGLLGDVLAQWVEYLFGAAFPPWKTTAMVWRSCAVMIDGLLINGPLLHYAYEMLESRMPAGDSILAAMTQVCVDVLVIDPVFAFMFVWSTGLIEGRSVRGEILPTIVHHYPTLVLWLIVIGVGWAPIQIYLFNRYPVQYRVLTADLIDLVWTCVSSLFSHV 185
BLAST of mRNA_P-fluviatile_contig7.13661.1 vs. uniprot
Match: D8LMD8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMD8_ECTSI) HSP 1 Score: 182 bits (461), Expect = 4.050e-54 Identity = 88/174 (50.57%), Postives = 124/174 (71.26%), Query Frame = 1
Query: 4 LDKYPVVTKSTSSGLIGLLGDVLAQSIGWVLWGGPP--LWATPDALWRSCAVMLDGFFINGPLLHYAYEILEEYLPAEESLLAAVIQVGVDVFVIDPVFAFIFVWSTGLIEGRSVRHEILGTLEHDYPTMVLWLVVIGLCWAPLQIYLFNRYPVQFRVLTADLIDLVWTCVTSF 519
L+K P++ K +S L+G LGDV++Q + W + GG +W +A+ +S AV +DGF ++ PLLH AY L+ +LPAEES A+ QV VDV V+DP+F +F+ +TGL+EGRS EI+ T+E DY T+V WLVVIGL APLQ+Y FNR+PV++RVL +D +D++WT V F
Sbjct: 89 LEKRPLIWKCATSALVGALGDVISQGVYWAIRGGRANAVWHDTNAVRQSLAVAIDGFCVSAPLLHLAYGALDRWLPAEESKAYALAQVLVDVLVLDPIFGLLFMVTTGLLEGRSFSQEIIRTIEDDYVTLVFWLVVIGLALAPLQVYTFNRFPVKWRVLISDGMDVLWTFVACF 262
BLAST of mRNA_P-fluviatile_contig7.13661.1 vs. uniprot
Match: A0A6H5L428_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L428_9PHAE) HSP 1 Score: 118 bits (296), Expect = 1.100e-27 Identity = 54/69 (78.26%), Postives = 62/69 (89.86%), Query Frame = 1
Query: 256 QVGVDVFVIDPVFAFIFVWSTGLIEGRSVRHEILGTLEHDYPTMVLWLVVIGLCWAPLQIYLFNRYPVQ 462
Q+GVDV VIDPVFAF+F+W TGLIEGRSV+ EIL T+ H YPT+VLWLVVIG+ WAP+QIYLFNRYPVQ
Sbjct: 650 QIGVDVLVIDPVFAFMFIWYTGLIEGRSVQGEILPTIVHHYPTLVLWLVVIGVGWAPVQIYLFNRYPVQ 718
BLAST of mRNA_P-fluviatile_contig7.13661.1 vs. uniprot
Match: A0A7S3XMM5_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XMM5_HETAK) HSP 1 Score: 106 bits (265), Expect = 1.680e-25 Identity = 66/181 (36.46%), Postives = 90/181 (49.72%), Query Frame = 1
Query: 4 LDKYPVVTKSTSSGLIGLLGDVLAQSIGWVLW---GGPPLWATPDAL--WRSCAVMLDGFFINGPLLHYAYEILEEYLPAEES-LLAAVIQVGVDVFVIDPVFAFIFVWSTGLIEGRSVRHEILGTLEHDYPTMVLWLVVIGLCWAPLQIYLFNRYPVQFRVLTADLIDLVWTCVTSFFCH 528
L P++TK+ S+ I GD Q W W + L R AVM+DG FI GP+LH AYE+LE +P E L AV+ V D F++DP+F F +TGL E R + + L L ++P + + P+Q F PV++RVL + IDL WT SFF H
Sbjct: 28 LKNAPMLTKALSAAGIAASGDFATQI--WEHWRETSNQGILVDKFILDRRRQLAVMMDGIFITGPILHLAYELLEHLVPTEGGGALPAVLHVAADTFLLDPLFVCTFFLTTGLFERRPLWADTLPRLRREFPAALRGSWSVSAVCLPVQFASFRYVPVRYRVLLVNCIDLAWTATMSFFSH 206
BLAST of mRNA_P-fluviatile_contig7.13661.1 vs. uniprot
Match: A0A7S3DNH3_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DNH3_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 4.580e-21 Identity = 67/188 (35.64%), Postives = 98/188 (52.13%), Query Frame = 1
Query: 4 LDKYPVVTKSTSSGLIGLLGDVLAQSIGWVLWGGPPLWATP-----DALWRSCAVMLDGFFINGPLLHYAYEILEEYLPAEESLL-------AAVIQVGVDVFVIDPVFAFIFVWSTGLIEGRSVRHEILGTLEHDY-PTMVLWLVVIGLCWAPLQIYLFNRYPVQFRVLTADLIDLVWTCVTSFFCH 528
L ++P+VTKS ++GL+G GD +AQ + W PP DA R ++++DG ++GPL+H+AYE +E + P + A+ V D V+D +F +W+TGL+EG SVR + DY PT+ V L PL++ F PV FRVL + IDL+W V S H
Sbjct: 177 LQRHPLVTKSVTAGLLGWGGDSVAQRLEG--WKQPPQGRHSRQGRYDAR-RGGSLLVDGLLLSGPLMHFAYEWMETWWPIPSATAYWWQGWGIALTHVLADTLVLDSIFVASTLWTTGLLEGYSVR-QCWWQFRQDYIPTLKAGGVTSFLV-LPLELACFKCLPVSFRVLAVNFIDLIWDTVISHMAH 359
BLAST of mRNA_P-fluviatile_contig7.13661.1 vs. uniprot
Match: A0A7S3LFT8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LFT8_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.860e-20 Identity = 65/181 (35.91%), Postives = 96/181 (53.04%), Query Frame = 1
Query: 4 LDKYPVVTKSTSSGLIGLLGDVLAQSIGWVLW----GGPPLWATPDALWRSCAVMLDGFFINGPLLHYAYEILEEYLPAEESLLAAVIQVGVDVFVIDPVFAFIFVWSTGLIEGRSVRHEILGTLEHDY-PTM-VLWLVVIGLCWAPLQIYLFNRYPVQFRVLTADLIDLVWTCVTSFFCH 528
L P+VTK ++G+IG LGD LAQS+ L P + + D R + +L GFFI+GPL+H+AY++ + LP + AA++ V D +D +F TG +EG R +++ L DY PT+ W I L P++ F P+ +RVL + IDL+W V SF H
Sbjct: 183 LSVNPLVTKGITAGVIGSLGDFLAQSLENFLHQRKNNAPVVHSKYDPR-RGLSTLLYGFFISGPLMHFAYDLFDRVLPIHGNG-AALVHVLADSIFLDAIFVAATYIVTGRMEGYKFR-QVMPQLRKDYLPTLKASWATSIFLM--PVEFVCFRFLPLNYRVLAVNFIDLIWDGVISFMAH 358
BLAST of mRNA_P-fluviatile_contig7.13661.1 vs. uniprot
Match: A0A2V3J3C5_9FLOR (Protein Mpv17 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3C5_9FLOR) HSP 1 Score: 86.3 bits (212), Expect = 1.200e-17 Identity = 56/178 (31.46%), Postives = 94/178 (52.81%), Query Frame = 1
Query: 4 LDKYPVVTKSTSSGLIGLLGDVLAQSIGWVLWGGPPLWATPDALW--RSCAVMLDGFFINGPLLHYAYEILEEYLPAEESLLAAVIQVGVDVFVIDPVFAFIFVWSTGLIEGRSVRHEILGTLEHDY-PTMVLWLVVIGLCWAPLQIYLFNRYPVQFRVLTADLIDLVWTCVTSFFCH 528
LDKYP+VTK +SG++ + D++AQ + +W R+ A + + PLLH YE+ E Y+PA +L + Q+ +D V PV+ F+F+ ++EGR EI TL Y P++++ L++ + +Q F P ++RVL +++DLV+T + S H
Sbjct: 47 LDKYPLVTKMLTSGVLVAISDLIAQLV-----------EARGYIWVQRTIAFSVAEIVFSAPLLHVLYELYERYIPAV-NLRNLLSQLVLDGVVAMPVWLFVFLVLVSILEGRWTLVEIWETLRTKYIPSLIVTLILTPV----VQSVNFTVVPPKYRVLVVNIVDLVYTTILSLLAH 208
BLAST of mRNA_P-fluviatile_contig7.13661.1 vs. uniprot
Match: UPI0018AE4B44 (protein Mpv17-like isoform X2 n=2 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE4B44) HSP 1 Score: 84.3 bits (207), Expect = 2.060e-16 Identity = 55/176 (31.25%), Postives = 89/176 (50.57%), Query Frame = 1
Query: 1 ALDKYPVVTKSTSSGLIGLLGDVLAQSIGWVLWGGPPLWATPDALWRSCAVMLDGFFINGPLLHYAYEILEEYLPAEESLLAAVIQVGVDVFVIDPVFAFIFVWSTGLIEGRSVRHEILGTLEHDYPTMVLWLVVIGLCWAPLQIYLFNRYPVQFRVLTADLIDLVWTCVTSFFCH 528
ALDK+PV+TKS +S L+ L+GD++ Q + A+ L RS GF + GP LH+ Y L + + S A + + +D F+ P+F +F+ ++EGR +++ L+ ++P+ + V W P Q +F P QF+VL D + L W + SF H
Sbjct: 115 ALDKHPVLTKSITSALLTLIGDLICQLM--------IEQASKLDLKRSLIFTTLGFVLVGPTLHFWYLSLSKLVTTTGSS-GAFVCLLLDQFLFSPIFIGVFLSLVVILEGRP--SQVVPKLKQEWPSSM---VANWQLWIPFQFLIFRFVPQQFQVLATDFVALAWNAILSFKAH 276
BLAST of mRNA_P-fluviatile_contig7.13661.1 vs. uniprot
Match: A0A0E9XNA4_ANGAN (Uncharacterized protein n=2 Tax=Anguilla anguilla TaxID=7936 RepID=A0A0E9XNA4_ANGAN) HSP 1 Score: 81.3 bits (199), Expect = 6.710e-16 Identity = 56/174 (32.18%), Postives = 88/174 (50.57%), Query Frame = 1
Query: 4 LDKYPVVTKSTSSGLIGLLGDVLAQSIGWVLWGGPPLWATPDALWRSCAVM------LDGFFINGPLLHYAYEILEEYLPAEESLLAAVIQVGVDVFVIDPVFAFIFVWSTGLIEGRSVRHEILGTLEHDY-PTMVL-WLVVIGLCWAPLQIYLFNRYPVQFRVLTADLIDLVW 501
L KYP++TKS +SG++ LG++L+Q++ T L + V+ + G F GPL HY Y+++E P+ E A+ ++ +D V P F +F + ++EGR++ G + Y P + + W V W P Q N PVQFRVL A+L+ L W
Sbjct: 25 LKKYPILTKSVTSGILSALGNLLSQALE-----SRKKRTTDGNLRKGLNVLGPARFAVYGLFCTGPLSHYFYQLMELVFPSSEPY-CALKRLLLDRLVFAPAFLLLFFFVMNVLEGRTIS-AFQGKVRAGYWPALKMNWKV-----WTPFQFININYVPVQFRVLFANLVALFW 186
BLAST of mRNA_P-fluviatile_contig7.13661.1 vs. uniprot
Match: UPI001B7EE91C (peroxisomal membrane protein 2-like n=4 Tax=Acipenseroidei TaxID=186622 RepID=UPI001B7EE91C) HSP 1 Score: 80.1 bits (196), Expect = 1.740e-15 Identity = 58/183 (31.69%), Postives = 89/183 (48.63%), Query Frame = 1
Query: 4 LDKYPVVTKSTSSGLIGLLGDVLAQ---------SIGWVL-WGGPPLWATPDALWRSCAVMLDGFFINGPLLHYAYEILEEYLPAEESLLAAVIQVGVDVFVIDPVFAFIFVWSTGLIEGRS-------VRHEILGTLEHDYPTMVLWLVVIGLCWAPLQIYLFNRYPVQFRVLTADLIDLVW 501
L KYP++TKS +SG++ LG++L+Q ++G L WGGP +A + G + GP+ HY Y+ LE ++P+ S + ++ +D V P F +F + +EG+S V+ E L+ + W V W P Q N PVQFRVL A+L+ L W
Sbjct: 25 LKKYPILTKSVTSGILSALGNLLSQGLQRRGKGSNLGKGLEWGGPARFA------------VYGLCVTGPVSHYFYQCLELFVPSSASH-CILKRLLLDRLVFSPAFLLVFFLAMNFLEGKSWAAFQKRVKTEYWSALKMN------WKV-----WTPFQFININYVPVQFRVLFANLVALFW 183 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13661.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig7.13661.1 >prot_P-fluviatile_contig7.13661.1 ID=prot_P-fluviatile_contig7.13661.1|Name=mRNA_P-fluviatile_contig7.13661.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=178bp ALDKYPVVTKSTSSGLIGLLGDVLAQSIGWVLWGGPPLWATPDALWRSCAback to top mRNA from alignment at P-fluviatile_contig7:3169022..3170509- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig7.13661.1 ID=mRNA_P-fluviatile_contig7.13661.1|Name=mRNA_P-fluviatile_contig7.13661.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1488bp|location=Sequence derived from alignment at P-fluviatile_contig7:3169022..3170509- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig7:3169022..3170509- >mRNA_P-fluviatile_contig7.13661.1 ID=mRNA_P-fluviatile_contig7.13661.1|Name=mRNA_P-fluviatile_contig7.13661.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1068bp|location=Sequence derived from alignment at P-fluviatile_contig7:3169022..3170509- (Porterinema fluviatile SAG_2381)back to top |