mRNA_P-fluviatile_contig7.13647.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig7.13647.1 vs. uniprot
Match: D8LMF1_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMF1_ECTSI) HSP 1 Score: 125 bits (314), Expect = 2.850e-30 Identity = 60/74 (81.08%), Postives = 67/74 (90.54%), Query Frame = 2
Query: 53 MPTYSEMAKAAILALNERQGSSIPAIKKHVEATYPSLTFLPHQLRSALKKGVKTGVFVKVKASYKLSPEAKKPP 274
MPTYSEMAK AILAL ER GSS+PAIKKH++ATYP+L FLPHQLR ALKKG +TG F+KVKASYK+SPEAKKPP
Sbjct: 1 MPTYSEMAKVAILALKERNGSSVPAIKKHIQATYPTLNFLPHQLRGALKKGTETGTFIKVKASYKVSPEAKKPP 74
BLAST of mRNA_P-fluviatile_contig7.13647.1 vs. uniprot
Match: D7G4I5_ECTSI (H15 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4I5_ECTSI) HSP 1 Score: 102 bits (253), Expect = 8.580e-22 Identity = 51/72 (70.83%), Postives = 59/72 (81.94%), Query Frame = 2
Query: 56 PTYSEMAKAAILALNERQGSSIPAIKKHVEATYPSLTFLPHQLRSALKKGVKTGVFVKVKASYKLSPEAKKP 271
PTYS M AI AL ER GSS+PA+KK + ATYPSL F PHQ+RSALKKG ++G F+KVK+SYKLSPEAKKP
Sbjct: 7 PTYSVMVFDAIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKP 78
BLAST of mRNA_P-fluviatile_contig7.13647.1 vs. uniprot
Match: D8LQ80_ECTSI (Histone H1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ80_ECTSI) HSP 1 Score: 99.8 bits (247), Expect = 3.180e-21 Identity = 52/78 (66.67%), Postives = 60/78 (76.92%), Query Frame = 2
Query: 47 SNMPTYSEMAKAAILALNERQGSSIPAIKKHVEATYPSLTFLPHQLRSALKKGVKTGVFVKVKASYKLSPEAKKPPPK 280
S PTY+ M AI L ER GSSI AIKK + ATYP+L F PHQ+RSALKKGV++G F+K+KASYKLS EAKKP PK
Sbjct: 3 STKPTYNAMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFIKMKASYKLSAEAKKPAPK 80
BLAST of mRNA_P-fluviatile_contig7.13647.1 vs. uniprot
Match: A0A7S2Y1F8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1F8_9STRA) HSP 1 Score: 97.1 bits (240), Expect = 3.300e-20 Identity = 48/73 (65.75%), Postives = 59/73 (80.82%), Query Frame = 2
Query: 53 MPTYSEMAKAAILALNERQGSSIPAIKKHVEATYPSLTFLPHQLRSALKKGVKTGVFVKVKASYKLSPEAKKP 271
MP+Y +MAKAAILAL +R GSS+PAIK ++ A YPS+ FLPH LR+ALKK V+ G +KVKASYKLS + KKP
Sbjct: 1 MPSYYDMAKAAILALKDRTGSSLPAIKAYITANYPSVKFLPHALRAALKKAVEAGKLIKVKASYKLSADEKKP 73
BLAST of mRNA_P-fluviatile_contig7.13647.1 vs. uniprot
Match: A0A6H5KCU1_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCU1_9PHAE) HSP 1 Score: 99.0 bits (245), Expect = 1.150e-19 Identity = 50/74 (67.57%), Postives = 58/74 (78.38%), Query Frame = 2
Query: 56 PTYSEMAKAAILALNERQGSSIPAIKKHVEATYPSLTFLPHQLRSALKKGVKTGVFVKVKASYKLSPEAKKPPP 277
PTY+ M AI L ER GSSI AIKK + ATYP+L F PHQ+R ALKKGV++G F+K+KASYKLSPEAKKP P
Sbjct: 99 PTYNVMVFDAIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRGALKKGVESGKFIKMKASYKLSPEAKKPAP 172
BLAST of mRNA_P-fluviatile_contig7.13647.1 vs. uniprot
Match: A0A6H5JHR9_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHR9_9PHAE) HSP 1 Score: 94.4 bits (233), Expect = 1.850e-19 Identity = 46/63 (73.02%), Postives = 54/63 (85.71%), Query Frame = 2
Query: 83 AILALNERQGSSIPAIKKHVEATYPSLTFLPHQLRSALKKGVKTGVFVKVKASYKLSPEAKKP 271
AI AL ER GSS+PA+KK + ATYPSL F PHQ+RSALKKG ++G F+KVK+SYKLSPEAKKP
Sbjct: 5 AIKALKERGGSSLPALKKQIMATYPSLNFTPHQMRSALKKGTESGKFIKVKSSYKLSPEAKKP 67
BLAST of mRNA_P-fluviatile_contig7.13647.1 vs. uniprot
Match: D8LQ75_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ75_ECTSI) HSP 1 Score: 94.0 bits (232), Expect = 9.460e-19 Identity = 48/66 (72.73%), Postives = 55/66 (83.33%), Query Frame = 2
Query: 83 AILALNERQGSSIPAIKKHVEATYPSLTFLPHQLRSALKKGVKTGVFVKVKASYKLSPEAKKPPPK 280
AI +L ER GSSI AIKK + ATYP+L F PHQ+RSALKKGV+TG F+KVK+SYKLS EAKKP PK
Sbjct: 5 AIKSLKERNGSSIQAIKKSITATYPALNFTPHQMRSALKKGVETGKFIKVKSSYKLSAEAKKPVPK 70
BLAST of mRNA_P-fluviatile_contig7.13647.1 vs. uniprot
Match: A0A6H5KST0_9PHAE (H15 domain-containing protein n=6 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KST0_9PHAE) HSP 1 Score: 92.8 bits (229), Expect = 1.430e-18 Identity = 48/66 (72.73%), Postives = 54/66 (81.82%), Query Frame = 2
Query: 83 AILALNERQGSSIPAIKKHVEATYPSLTFLPHQLRSALKKGVKTGVFVKVKASYKLSPEAKKPPPK 280
AI L ER GSSI AIKK + ATYP+L F PHQ+RSALKKGV++G FVK+KASYKLS EAKKP PK
Sbjct: 5 AIKTLKERNGSSIQAIKKSITATYPTLNFTPHQMRSALKKGVESGKFVKMKASYKLSAEAKKPAPK 70
BLAST of mRNA_P-fluviatile_contig7.13647.1 vs. uniprot
Match: D8LJB8_ECTSI (H15 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJB8_ECTSI) HSP 1 Score: 90.9 bits (224), Expect = 1.280e-16 Identity = 49/82 (59.76%), Postives = 61/82 (74.39%), Query Frame = 2
Query: 53 MPTYSEMAKAAILALNERQGSSIPAIKKHVEATYPSLTFLPHQLRSALKKGVKTGVFVKVKASYKLSPEAKKPPPKIKVAKK 298
MPTY EM A+ AL ER GSS+ AIKKH+ A+YPSLTF H +RSALKKGV++G F+KVK SYKLS ++P K + A+K
Sbjct: 1 MPTYDEMTIEAVKALKERNGSSLFAIKKHITASYPSLTFTAHFMRSALKKGVESGKFIKVKNSYKLSAYRQEPAAKPQEAQK 82
BLAST of mRNA_P-fluviatile_contig7.13647.1 vs. uniprot
Match: A0A6H5JIM8_9PHAE (H15 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM8_9PHAE) HSP 1 Score: 90.1 bits (222), Expect = 2.230e-16 Identity = 46/67 (68.66%), Postives = 53/67 (79.10%), Query Frame = 2
Query: 53 MPTYSEMAKAAILALNERQGSSIPAIKKHVEATYPSLTFLPHQLRSALKKGVKTGVFVKVKASYKLS 253
MPTY EM A+ AL ER GSS+ AIKKH+ A+YPSLTF H LRSALKKGV++G F+KVK SYKLS
Sbjct: 1 MPTYDEMTVEAVKALKERNGSSLFAIKKHITASYPSLTFTGHFLRSALKKGVESGKFIKVKNSYKLS 67 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13647.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig7.13647.1 >prot_P-fluviatile_contig7.13647.1 ID=prot_P-fluviatile_contig7.13647.1|Name=mRNA_P-fluviatile_contig7.13647.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=169bp MPTYSEMAKAAILALNERQGSSIPAIKKHVEATYPSLTFLPHQLRSALKKback to top mRNA from alignment at P-fluviatile_contig7:2970614..2974323+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig7.13647.1 ID=mRNA_P-fluviatile_contig7.13647.1|Name=mRNA_P-fluviatile_contig7.13647.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3710bp|location=Sequence derived from alignment at P-fluviatile_contig7:2970614..2974323+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig7:2970614..2974323+ >mRNA_P-fluviatile_contig7.13647.1 ID=mRNA_P-fluviatile_contig7.13647.1|Name=mRNA_P-fluviatile_contig7.13647.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1014bp|location=Sequence derived from alignment at P-fluviatile_contig7:2970614..2974323+ (Porterinema fluviatile SAG_2381)back to top |