mRNA_P-fluviatile_contig7.13620.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig7.13620.1 vs. uniprot
Match: D8LMI2_ECTSI (BTB_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMI2_ECTSI) HSP 1 Score: 1021 bits (2640), Expect = 0.000e+0 Identity = 556/711 (78.20%), Postives = 593/711 (83.40%), Query Frame = 2
Query: 197 MKARGTKLERGISTVPNTNVEDIIESDSPVAMAGFLATRGEARGLSTKAQAELQQEIGHVSKRLHDKWGALEKKXXXXXXTRRDAANLYGITGGGGPIVELNVGGTDMDVLRADLVRVEESVLALVFGGRWEGRLPRDSRGRVFVDVAPAVFRKIVQFLVKLGRATPGKPLELPTLTPEEQPNFDHLVLVLGLWPHVYEGHSPEAPPPPPRVKPKDIPAPAVEPADARKFGRQVATMFAVEEVALEMAELEFQAAREKYDREVASVAEFAGAPAGWGREGIDDDIVELNVGGTVISTRRSTLCRCPDSILARMFDHNTEKKAPPFVRDTKGRYFVQYNDYCFTKIIEVLRMKRWPWPPTKSSFANGTTLDGMSNSRFRIFVREDEREDFGSLCTYFFPGSENFIHEAVGRAGAAGAAASLMARAAQQPPVSKGIVPPRPVSAPAPSSAGVADPERG------DRD---------------HRXXXXXXXXXXXXXXXXXXXXXXX-------------------------------GLTKRRSSSRIDVKKLPSEISVLEIRVALVRKVTPLPRNSAHAMIAVQIHPDDKDLTEQRTVLWHFDTAPPRVGALVIVLCNLPNIKHQGILFTAVVLCMDDDLLVPPSDAPIGELVTVKGHPSLPSKNASAVSMIWEKVLNEELFQVGDDEVVRYEHKKIPGPLMTSKGPIMCT 2173
MKARGTK ERG + VP TNVEDI+E+DSP AM+ FLATRGEARGLSTKAQAELQ++IG VSKR+HDKWG LEKK RRDAAN YGITGGGGPIVELNVGGTDMDVLRADLVR EESVLALVFGGRWEGRLPRDSRGRVFVDV+P+VFRKIVQFLVKLGRATPGKP+ELPTLTPEEQPNFDHLVLVLGLW HVYEG + APPPP RVKPKDIPAPAV+PADARKFGRQVAT FAVEEV LE AELE+QAA+EKYDREVASVAEFAGAP G+GREG+DDD+VELN+GGTV+STRRSTL RCPDS+LARMFDH+TEKK PPFVRDTKGRYFVQYNDYCF KIIEVLRMKRWPWPP+KSSFANGTTLD MSNSRFRIFVREDEREDF SL +YFFPGSENFIHEA+GRAG AGA S M RA+Q P SKGI+PP P P P S+ DPER DRD HR XXXXXXXXXXXXXXXXXX GLTKRR+SSR+D KKLPSEISVLEIRV LVRKVTPLPRNSAHAMIAVQ+HP+DKDLTEQRTVLWHFDTAPP VG VI+LCNLP+IKHQGI+FTAVVLCMDDDLL+PP DAPIGELVTVKGHP PSKN AVSM+WEKVLNEELFQVGDDEVVRYEHKK PGPLMTS+GPIMCT
Sbjct: 1 MKARGTKSERG-NAVPKTNVEDIVETDSPAAMSSFLATRGEARGLSTKAQAELQEQIGQVSKRIHDKWGILEKKWRDLERDRRDAANSYGITGGGGPIVELNVGGTDMDVLRADLVRAEESVLALVFGGRWEGRLPRDSRGRVFVDVSPSVFRKIVQFLVKLGRATPGKPVELPTLTPEEQPNFDHLVLVLGLWRHVYEGRAALAPPPPSRVKPKDIPAPAVDPADARKFGRQVATAFAVEEVVLETAELEYQAAKEKYDREVASVAEFAGAPGGFGREGVDDDMVELNIGGTVVSTRRSTLTRCPDSVLARMFDHSTEKKTPPFVRDTKGRYFVQYNDYCFAKIIEVLRMKRWPWPPSKSSFANGTTLDAMSNSRFRIFVREDEREDFSSLTSYFFPGSENFIHEAIGRAGNAGA--SSMGRASQ--PRSKGIMPPDPSLDPDPVSS-ADDPERSEHRDLRDRDRXXXXXXXXXXXXXXHRDRDRDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHRSSASHGGHHGLTKRRTSSRVDTKKLPSEISVLEIRVGLVRKVTPLPRNSAHAMIAVQVHPNDKDLTEQRTVLWHFDTAPPSVGTSVILLCNLPSIKHQGIMFTAVVLCMDDDLLIPPPDAPIGELVTVKGHPPTPSKNERAVSMVWEKVLNEELFQVGDDEVVRYEHKKTPGPLMTSRGPIMCT 705
BLAST of mRNA_P-fluviatile_contig7.13620.1 vs. uniprot
Match: A0A6H5K7U7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7U7_9PHAE) HSP 1 Score: 708 bits (1827), Expect = 4.880e-249 Identity = 352/412 (85.44%), Postives = 376/412 (91.26%), Query Frame = 2
Query: 197 MKARGTKLERGISTVPNTNVEDIIESDSPVAMAGFLATRGEARGLSTKAQAELQQEIGHVSKRLHDKWGALEKKXXXXXXTRRDAANLYGITGGGGPIVELNVGGTDMDVLRADLVRVEESVLALVFGGRWEGRLPRDSRGRVFVDVAPAVFRKIVQFLVKLGRATPGKPLELPTLTPEEQPNFDHLVLVLGLWPHVYEGHSPEAPPPPPRVKPKDIPAPAVEPADARKFGRQVATMFAVEEVALEMAELEFQAAREKYDREVASVAEFAGAPAGWGREGIDDDIVELNVGGTVISTRRSTLCRCPDSILARMFDHNTEKKAPPFVRDTKGRYFVQYNDYCFTKIIEVLRMKRWPWPPTKSSFANGTTLDGMSNSRFRIFVREDEREDFGSLCTYFFPGSENFIHEAVGRAG 1432
MKARGTK ERG + VP TNVEDI+E DSP AM+ FLATRGEARGLSTKAQAELQ+EIG VSKR+HDKWG LEKK RRDAAN YGITGGGGPIVELNVGGTDMDVLR DLVR EESVLALVFGGRWEGRLPRDSRGRVFVDV+P+VFRKIVQFLVKLGRATPGKP+ELPTLTPEEQPNFDHLVLVLGLW HVYEG + APPPP RVKPKDIPAPAV+PADARKFGRQVAT FAVEEV LE AELE+QAA+EKYDREVASVAEFAGAP G+GREG+DDD+VELN+GGTV+STRRSTL RCP+S+LARMFDH+TEKK PPFVRDTKGRYFVQYNDYCF KII+VLRMKRWPWPP KSSFANGTTLD MSNSRFRIFVREDEREDF SL +YFFPG+ENFIHEA+GR G
Sbjct: 1 MKARGTKSERG-NAVPKTNVEDIVEKDSPAAMSSFLATRGEARGLSTKAQAELQEEIGKVSKRIHDKWGTLEKKWRDLERDRRDAANSYGITGGGGPIVELNVGGTDMDVLREDLVRAEESVLALVFGGRWEGRLPRDSRGRVFVDVSPSVFRKIVQFLVKLGRATPGKPVELPTLTPEEQPNFDHLVLVLGLWRHVYEGRAALAPPPPARVKPKDIPAPAVDPADARKFGRQVATAFAVEEVVLETAELEYQAAKEKYDREVASVAEFAGAPGGFGREGVDDDMVELNIGGTVVSTRRSTLTRCPNSVLARMFDHSTEKKTPPFVRDTKGRYFVQYNDYCFAKIIDVLRMKRWPWPPIKSSFANGTTLDAMSNSRFRIFVREDEREDFSSLTSYFFPGNENFIHEAIGRRG 411
BLAST of mRNA_P-fluviatile_contig7.13620.1 vs. uniprot
Match: A0A6H5KA35_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA35_9PHAE) HSP 1 Score: 247 bits (630), Expect = 2.780e-74 Identity = 115/132 (87.12%), Postives = 122/132 (92.42%), Query Frame = 2
Query: 1778 MIAVQIHPDDKDLTEQRTVLWHFDTAPPRVGALVIVLCNLPNIKHQGILFTAVVLCMDDDLLVPPSDAPIGELVTVKGHPSLPSKNASAVSMIWEKVLNEELFQVGDDEVVRYEHKKIPGPLMTSKGPIMCT 2173
M+AVQ+HPDDKDLTEQRTVLWHFDTAPP G VI+LCNLP+IKHQGI+FTAVVLCMDDDLL+PP DAPIGELVTVKGHP PSKN AVSM+WEKVLNEELFQVGDDEVVRYEHKK PGPLMTSKGPIMCT
Sbjct: 1 MLAVQVHPDDKDLTEQRTVLWHFDTAPPSPGTPVILLCNLPSIKHQGIMFTAVVLCMDDDLLIPPPDAPIGELVTVKGHPPTPSKNERAVSMVWEKVLNEELFQVGDDEVVRYEHKKTPGPLMTSKGPIMCT 132
BLAST of mRNA_P-fluviatile_contig7.13620.1 vs. uniprot
Match: A0A7D9I3R3_PARCT (Chaperone dnaK2 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9I3R3_PARCT) HSP 1 Score: 93.6 bits (231), Expect = 2.660e-16 Identity = 83/298 (27.85%), Postives = 120/298 (40.27%), Query Frame = 2
Query: 488 IVELNVGGTDMDVLRADLVRVEESVLALVFGGRWEGRLPRDSRGRVFVDVAPAVFRKIVQFLVKLGRATPGKPLELPTLTPEEQPNFDHLVLVLGLWPHVYEGHSPEAPPPPPRVKPKDIPAPAVEPADARKFGRQVATMFAVEEVALEMAELEFQAAREKYDREVASVAEFAGAPAGWGREGIDDDIVELNVGGTVISTRRSTLCRCPDSILARMFDHNTEKKAPPFVRDTKGRYFVQYNDYCFTKIIEVLRMKRWPWPPTKSSFANGTTLDGMSNSRFRIFVREDEREDFGSLCTY 1381
I+ LNVGG + R+ L +VE S+LA +F GRWE L RD G +F D P F I+++L ATP P LP + ++ + + G +D+ KF V +E + +A + Y+ E + E D+DI+ELNVGG ++T+RSTLC+ S+LA MF E RD G F +N F I++ LR K+ P + V ED+ E F +L Y
Sbjct: 56 IIHLNVGGHTLTTKRSTLCQVEGSLLASMFSGRWEDSLERDKDGAIFFDFNPQYFLVILEYLRAKKIATPEHPAPLPKVAEDQAKMYLKRAKMSG----------------------EDL---------LTKFDDLVKRFRNEFNDIIEGERAKMKAELDAYNAEKQRMKAV---------EVSDNDIIELNVGGHKLTTKRSTLCQVEGSLLASMFSGRWEDSLE---RDKDGAIFFDFNPQYFLVILDYLRAKKIATPEHPAPLPK---------------VAEDQAESFNNLLEY 295
BLAST of mRNA_P-fluviatile_contig7.13620.1 vs. uniprot
Match: D7FSV1_ECTSI (Potassium channel tetramerisation domain containing 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSV1_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 2.400e-13 Identity = 80/290 (27.59%), Postives = 120/290 (41.38%), Query Frame = 2
Query: 572 VFGGRWEGRLPRDSRGRVFVDVAPAVFRKIVQFLVKLGRATPGKPLELPTLTPEEQPNFDHLVLVLGLWPHVYEGHSP---EAPPPPPRVKPKDIPAPAVEPADARKFGRQVATMFAVEEVALEMAELEFQAAREKYDREVASVAEFAGAPAGWGREGIDDDIVELNVGGTVISTRRSTLCRCPDSILARMFDHN---TEKKAPPFVRDTKGRYFVQYNDYCFTKIIEVLRMKRWP-WPPTKSSFANGTTLDGMSNSRFRIFVREDEREDFGSLCTYFFPGSENFIHEAV 1420
+F G W+ R+PRD+ G V +D +PA + +V+ L L + + ++ P+L ++ P D L Y H+ EA R KPK MA +A Y ++AS G D++VEL+V G ++T RSTL CPDS+ F+ N TEK D GR + F K+++VLRMK+W W P++ + G + + VR +R L +FPG E FI + V
Sbjct: 97 LFKGAWDERVPRDAAGYVVLDESPACVQHLVRML--LASSVEAR-VDTPSLLGDDIPAHDTAYLE-------YISHARGLREA-----RAKPK-------------------------------MASAALEALTNVYGPDIAS--------------GKKDEVVELSVRGVRMTTLRSTLTACPDSVFTTWFNGNWKPTEKDL-----DKHGRRMLDCKPAVFAKVLDVLRMKKWAGWAPSEDAGGGGVVAKPVP-----VAVRPADRACLEELGNKYFPGCERFIMDLV 316
BLAST of mRNA_P-fluviatile_contig7.13620.1 vs. uniprot
Match: A0A0G4G7R6_VITBC (BTB domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4G7R6_VITBC) HSP 1 Score: 82.4 bits (202), Expect = 4.800e-13 Identity = 40/101 (39.60%), Postives = 60/101 (59.41%), Query Frame = 2
Query: 488 IVELNVGGTDMDVLRADLVRVEESVLALVFGGRWEGRLPRDSRGRVFVDVAPAVFRKIVQFLVKLGRATPGKPLELPTLTPEEQPNFDHLVLVLGLWPHVY 790
++ELNVGG M VLR+ L + E S+L +F GRWE + RD +G VF+D P F+ ++ FL PG+P P + E+Q F HL+ LG+ +++
Sbjct: 93 VIELNVGGERMSVLRSTLCQCETSLLTSMFSGRWEAAVKRDKQGSVFLDFDPDCFKALLNFLRNKRIEGPGRPAPRPIIPKEKQGEFGHLLQYLGMTDYLF 193
BLAST of mRNA_P-fluviatile_contig7.13620.1 vs. uniprot
Match: A0A6H5LAP0_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LAP0_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 3.170e-11 Identity = 56/181 (30.94%), Postives = 92/181 (50.83%), Query Frame = 2
Query: 872 DARKFGRQVATMFAVEEVALEMAELEFQAAREKYDREVASVAEFAGAPAGWGREGIDDDIVELNVGGTVISTRRSTLCRCPDSILARMFDHNTEKKAPPFVRD--TKGRYFVQYNDYCFTKIIEVLRMKRWPWPPTKSSFANGTTLDGMSNSRFRIFVREDEREDFGSLCTYFFPGSENFI 1408
D FG+ +A E+ L+ A +E A+ + ++A G G++ +D+VEL+V GT ++T RSTL CPDS LA FD E K P +D + GR + F+K+++VLR+ + ++++A G L GM +R + ++ +R F +F G E+FI
Sbjct: 400 DVPTFGQLIADSLMEAEMVLQDAGIELALAKARTTACATALAAVYGPDVASGQQ---EDVVELSVRGTAMTTLRSTLRVCPDSALAARFD---EGKWPAAKKDLDSDGRRMIDCRPAVFSKVLDVLRIAK------RAAWAGGENLQGMKETR--VTIKPGDRVAFEEFVDMYFKGCESFI 566
BLAST of mRNA_P-fluviatile_contig7.13620.1 vs. uniprot
Match: K0RR92_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RR92_THAOC) HSP 1 Score: 77.8 bits (190), Expect = 4.260e-11 Identity = 48/145 (33.10%), Postives = 74/145 (51.03%), Query Frame = 2
Query: 344 QAELQQEIGHVSKRLHDKWGALEKKXXXXXXTRRDAANLYGITGGGGP-IVELNVGGTDMDVLRADLVRVEESVLALVFGGRWEGRLPRDSRGRVFVDVAPAVFRKIVQFLVKLGRATPGKPLELPTLTPEEQPNFDHLVLVLGL 775
+ E ++EI + D G + K + + A YG IV +N GGT +DV R L +++ + L +F GRWE +L +DS GR+F+DV P F+ IV +L +L + P +LP + E Q DH + + GL
Sbjct: 19 EREYKEEISKLDNAERDLLGRVSK----LNEMKDETAKRYGNEDASDDDIVNINAGGTIIDVKRGTLCQLKGTRLEALFSGRWEKKLQKDSSGRIFLDVNPTAFQAIVDYLNELSISAEEDPPQLPRVNEEHQHILDHQLELFGL 159
BLAST of mRNA_P-fluviatile_contig7.13620.1 vs. uniprot
Match: K0RC63_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RC63_THAOC) HSP 1 Score: 77.8 bits (190), Expect = 4.410e-11 Identity = 39/96 (40.62%), Postives = 58/96 (60.42%), Query Frame = 2
Query: 488 IVELNVGGTDMDVLRADLVRVEESVLALVFGGRWEGRLPRDSRGRVFVDVAPAVFRKIVQFLVKLGRATPGKPLELPTLTPEEQPNFDHLVLVLGL 775
IV +N GGT +DV R L +++ + L +F GRWE +L +DS GR+F+DV P F+ IV +L +L + P +LP + E Q DH + + GL
Sbjct: 64 IVNINAGGTIVDVKRGTLCQLKGTRLEALFSGRWEKKLQKDSSGRIFLDVNPTAFQAIVDYLNELSISAEDDPPQLPRVNEEHQHILDHQLELFGL 159
BLAST of mRNA_P-fluviatile_contig7.13620.1 vs. uniprot
Match: A0A813FKR9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813FKR9_POLGL) HSP 1 Score: 75.5 bits (184), Expect = 1.020e-10 Identity = 51/152 (33.55%), Postives = 74/152 (48.68%), Query Frame = 2
Query: 338 KAQAELQQ-EIGHVSKRLHDKWGALEKKXXXXXXTRRDAANLYGITGGGGPIVELNVGGTDMDVLRADLVRVEESVLALVFGGRWEGRLPRDSRGRVFVDVAPAVFRKIVQFLVKLGRATPGKPLELPTLTPEEQPNFDHLVLVLGLWPHVY 790
K +A LQ E KRL +K LE+ ++ + G +VELNVGG M RA L E S+LA +F G ++ RD GR+F+D+ P +F K++ L A+P P LP + E QP +D ++ GL +Y
Sbjct: 76 KERAALQLVEANAAEKRLEEKRSKLEELEH----------RIFAVADGVDDVVELNVGGQLMSTTRAVLRSAEGSLLAGMFSGNFDSGHKRDKEGRIFLDIDPPLFSKVLSHLRLRRIASPDCPAPLPHIAEELQPEYDMMIKYFGLETFMY 217 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13620.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig7.13620.1 >prot_P-fluviatile_contig7.13620.1 ID=prot_P-fluviatile_contig7.13620.1|Name=mRNA_P-fluviatile_contig7.13620.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=660bp MKARGTKLERGISTVPNTNVEDIIESDSPVAMAGFLATRGEARGLSTKAQback to top mRNA from alignment at P-fluviatile_contig7:2666833..2674948+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig7.13620.1 ID=mRNA_P-fluviatile_contig7.13620.1|Name=mRNA_P-fluviatile_contig7.13620.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8116bp|location=Sequence derived from alignment at P-fluviatile_contig7:2666833..2674948+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig7:2666833..2674948+ >mRNA_P-fluviatile_contig7.13620.1 ID=mRNA_P-fluviatile_contig7.13620.1|Name=mRNA_P-fluviatile_contig7.13620.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3960bp|location=Sequence derived from alignment at P-fluviatile_contig7:2666833..2674948+ (Porterinema fluviatile SAG_2381)back to top |