mRNA_P-fluviatile_contig7.13584.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig7.13584.1
Unique NamemRNA_P-fluviatile_contig7.13584.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig7.13584.1 vs. uniprot
Match: D7FP06_ECTSI (Chalcone Isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FP06_ECTSI)

HSP 1 Score: 362 bits (928), Expect = 4.120e-120
Identity = 194/234 (82.91%), Postives = 210/234 (89.74%), Query Frame = 2 
Query:  158 MRAFKACTG---AVGALLMGLLAQPSDLRAAAADVTEKATKISFKERVNLPGGSASSLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAAKELVAHAGEDSESLGKNEGFFTRVAKSKFEKAMVLKMAREVGTEKMVSALAESVKPRLSGSKKPLDTFQEILLTAVGKEGAAKKGMQFGFVCKPGALCVSINGKDAGTVRSGPLSAAMVDVYLGKKAVSPGARKDFAAGIAGLLER 850
            M AFKACT    A GALL+ LLA P +L  A ADVTE+ATKISF+E+V+LPGGS SSLMGTGVRVKKIGPAGVKVYAVGLYVDEK AAKEL  H GED ESLGKN+GFFTRVAKS FEK MVLKMAREVGTEKMVSALAESVKPR+SGSKKPLD+FQ+ILL AVGKEGAAKKGMQFGFVCKPGALCVS+NGKDAGT++SGPLS+AMVDVYLGKKAVSPGA+K FA G+A LLER
Sbjct:    1 MGAFKACTSTLAAAGALLL-LLAAPQNL-CARADVTERATKISFREKVSLPGGSGSSLMGTGVRVKKIGPAGVKVYAVGLYVDEKAAAKELEVHKGEDGESLGKNDGFFTRVAKSNFEKTMVLKMAREVGTEKMVSALAESVKPRISGSKKPLDSFQDILLKAVGKEGAAKKGMQFGFVCKPGALCVSVNGKDAGTIKSGPLSSAMVDVYLGKKAVSPGAKKAFATGVAALLER 232
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BLAST of mRNA_P-fluviatile_contig7.13584.1 vs. uniprot
Match: A0A835Z9G1_9STRA (Chalcone isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9G1_9STRA)

HSP 1 Score: 232 bits (592), Expect = 7.410e-70
Identity = 126/204 (61.76%), Postives = 152/204 (74.51%), Query Frame = 2 
Query:  245 ADVTEKATKISFKERVNLPGGS-ASSLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAAKELVAHAGEDSESLGKNEGFFTRVAKSKFEKAMVLKMAREVGTEKMVSALAESVKPRLS-GSKKPLDTFQEILLTAVGKEGAAKKGMQFGFVCKPGALCVSINGKDAGTVRSGPLSAAMVDVYLGKKAVSPGARKDFAAGIAGLLER 850
            ADV E AT ISFK+ + LPG S A SL GTGVRVKKIGPA  KVYAVG+YVD   A  EL  H+  +S +L K++ FF     + FEK +VLKMAR+VG EKMV+ALAESVKPRL+ G    L+ FQ +LL AV KEGAA KGMQFGFVCKPG+LCVSI+GK AGT+ S  L +AM+DVYLGK AVSPGA+  FA G++ + ++
Sbjct:   17 ADVKEHATGISFKDTLKLPGASTAGSLAGTGVRVKKIGPAAFKVYAVGMYVDSAKARSELSKHSSTESRALSKSDAFFKDARSASFEKTLVLKMARKVGAEKMVNALAESVKPRLAPGGDAALEEFQTVLLDAVTKEGAANKGMQFGFVCKPGSLCVSIDGKTAGTINSEQLRSAMLDVYLGKDAVSPGAKTSFAEGMSSMFKQ 220
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BLAST of mRNA_P-fluviatile_contig7.13584.1 vs. uniprot
Match: A0A7R9YAW0_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAW0_9STRA)

HSP 1 Score: 159 bits (403), Expect = 4.470e-42
Identity = 102/223 (45.74%), Postives = 130/223 (58.30%), Query Frame = 2 
Query:  188 VGALLMGLLAQPSDLRAAAADVTEKATKISFKERV---NLPGGSASSLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAAKELVAHAGEDSESLGKNEGFFTRVAKSKFEKAMVLKMAREVGTEKMVSALAESVKPRLSGSKKPLDTFQEILLTAVGKEGAAKKGMQFGFVCKPGALCVSINGKDAGTVRSGPLSAAMVDVYLGKKAVSPGARKDFAAGIAGLLE 847
            + ALL   LA PS     A DV   AT I F  R+   + PG    +L GTGVRVKKIGP  VKVYAVGLYVD++     L +      E+L  ++ FF  + K+ F+K   LKMAR VG EKMV+AL+ESV+PR+    + L  FQ +L + + K G+  K   FGF    G L VSINGK  G V S  L  A+ D YLG+ AVSP A+  FA G+  +L+
Sbjct:    6 LSALLALALALPSR---GAVDV---ATGIEFPNRITDKDFPGVGDGTLAGTGVRVKKIGPVAVKVYAVGLYVDQRAVQSSLNSFEAFPEETLLGSKAFFKAIRKAPFDKCFQLKMARTVGGEKMVNALSESVRPRMKSELEALSEFQSVLQSGL-KGGSCVKNTSFGFAANKGKLIVSINGKQEGVVASRELCDALTDTYLGEGAVSPDAKASFAKGLCNMLK 221
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BLAST of mRNA_P-fluviatile_contig7.13584.1 vs. uniprot
Match: A0A6S9FSE1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9FSE1_HETAK)

HSP 1 Score: 156 bits (395), Expect = 4.740e-41
Identity = 94/202 (46.53%), Postives = 118/202 (58.42%), Query Frame = 2 
Query:  239 AAADVTEKATKISFKERVNLPGGSASSLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAAKELVAHAGEDSESLGKNEGFFTRVAKSKFEKAMVLKMAREVGTEKMVSALAESVKPRLSGSKKPLDTFQEILLTAVGKEGAAKKGMQFGFVCKPGALCVSINGKDAGTVRSGPLSAAMVDVYLGKKAVSPGARKDFAAGIAGLL 844
            A ADVTE  T I F +R    G     L G GVRVK+IGP  VKVY VG+Y+DE  A +E+  +AG        + GFF+R+ K   +K +VLKMAR VG+E M  ALAES+KPR+SG    L +FQ +LL  + ++G+AKKG +  F    G L V INGK AG V S  L  A VD Y+  K VSP  R   A  +   L
Sbjct:   18 ALADVTEPKTGIKFADRFGGLG-----LAGVGVRVKQIGPLSVKVYGVGMYMDESSALEEISEYAGGKKA----DSGFFSRLRKPSIDKKIVLKMARSVGSETMSEALAESIKPRMSGDLPALSSFQTVLLKGLSEDGSAKKGTELAFDASGGKLNVKINGKSAGDVESSSLCDAFVDTYMDDKGVSPTLRDSIAETLCAKL 210
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BLAST of mRNA_P-fluviatile_contig7.13584.1 vs. uniprot
Match: A0A7S1XYD8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XYD8_9STRA)

HSP 1 Score: 153 bits (387), Expect = 9.740e-40
Identity = 90/201 (44.78%), Postives = 122/201 (60.70%), Query Frame = 2 
Query:  257 EKATKISFKERVN---LPG-GSASSLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAAKELVAHAGEDSESLGKNEGFFTRVAKSKFEKAMVLKMAREVGTEKMVSALAESVKPRLSGSKKPLDTFQEILLTAVGKEGAAKKGMQFGFVCKPGALCVSINGKDAGTVRSGPLSAAMVDVYLGKKAVSPGARKDFAAGIAGLLE 847
            E AT + FK  ++    PG G  + L G G R+K+IGP  VKVYAVGLYVD++     L +      E+L  ++ FF  + K+ FEK  +LKMAR VG++KMV+ALA+S+KPR+    + L  FQ  LL+A  K G+  K   FGF    G L VSINGK+ GTV S  L  A  D Y+G  AVSP A+ +FA G+  +++
Sbjct:   24 EAATGLDFKPTMSDSDFPGVGGDAKLAGMGCRIKQIGPVKVKVYAVGLYVDQRAVQSSLNSFEAFPEETLLGSKAFFKAIRKAPFEKCFMLKMARTVGSDKMVNALADSIKPRMKNEMEALTEFQG-LLSAGLKGGSCTKNTAFGFAASKGKLVVSINGKEEGTVNSRELCDAFTDTYIGDNAVSPDAKSNFAKGLCAMIK 223
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BLAST of mRNA_P-fluviatile_contig7.13584.1 vs. uniprot
Match: A0A7S4J4F7_9EUKA (Hypothetical protein n=1 Tax=Prymnesium polylepis TaxID=72548 RepID=A0A7S4J4F7_9EUKA)

HSP 1 Score: 115 bits (287), Expect = 8.700e-26
Identity = 79/199 (39.70%), Postives = 109/199 (54.77%), Query Frame = 2 
Query:  257 EKATKISFKERVNLPGGSASSLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAAKELVAHAGEDSESLGKNEGFFTRVAKSKFEKAMVLKMAREVGTEKMVSALAESVKPRLSGSKKPLDTFQEILLTAV---GKEGAAKKGMQFGFVCKPGALCVSINGKDAGTVRSGPLSAAMVDVYLGKKAVSPGARKDFAAGIAGLL 844
            E +TKISF E+    GG   SL+G GVR K  GP  +KVY VG+YVD   +   L       +E +  +  F+    +  F K +VLKM   V  EKM  A+A+SVKPR+SG K  +   +E LL       K+G A  G +F F  +  ++ VS+NGK   T+ S PL  A+++ YL   +VSPG +   A G+ GLL
Sbjct:   27 EPSTKISFPEK---RGGQ--SLVGVGVRKK--GP--IKVYGVGMYVDGFASKMSLSKFKSTAAEKV--DSSFYKACVEGGFGKTLVLKMKFGVSKEKMAGAIADSVKPRISGDKSAVAKLEESLLVGCDKYAKDGRAGPGTEFCFAIRGASMGVSVNGKSVATISSKPLCKALLNCYLDGSSVSPGLKSTCAEGLIGLL 214
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BLAST of mRNA_P-fluviatile_contig7.13584.1 vs. uniprot
Match: A0A7S0Q024_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q024_9EUKA)

HSP 1 Score: 109 bits (272), Expect = 8.640e-24
Identity = 76/201 (37.81%), Postives = 108/201 (53.73%), Query Frame = 2 
Query:  257 EKATKISFKERVNLPGGSASSLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAAKELVAHAGEDSESLGKNEGFFTRVAKSKFEKAMVLKMAREVGTEKMVSALAESVKPRLSGSKKPLDTFQEILLTAV---GKEGAAKKGMQFGFVCKPGALCVSINGKDAGTVRSGPLSAAMVDVYLGKKAVSPGARKDFAAGIAGLLER 850
            E ATK+ FK+ +N        L+G GVR K  GP  +KVY +G+YVD  G+   L  +   +S +L     FF  +    F K +VLKM   V  EKM  ALAES+KPR++G    +  F+++L+       K+G A  G +F F  +  +L V +NGK  GT+ S PL  A++  Y   K+V+P  +   A G   LLER
Sbjct:   20 EPATKVGFKDSLN-----GQPLVGVGVRKK--GP--IKVYGIGMYVDAMGSKMSLSKYKQHES-ALKLPASFFEDILGG-FGKTLVLKMVYGVSKEKMAGALAESIKPRMTGGLAAVSEFEQMLMDGCETHAKDGRACAGTEFQFGVRGSSLGVHVNGKKVGTINSKPLCRALLKCYFDSKSVAPALKSTSAEG---LLER 206
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BLAST of mRNA_P-fluviatile_contig7.13584.1 vs. uniprot
Match: A0A7S0IHP3_9EUKA (Hypothetical protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IHP3_9EUKA)

HSP 1 Score: 105 bits (263), Expect = 1.880e-22
Identity = 88/243 (36.21%), Postives = 123/243 (50.62%), Query Frame = 2 
Query:  140 NSRAREMRAFKACTGAVGALLMGLLAQPSDLRAAAADV---TEKATKISFKERVNLPGGSASSLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAAKELVAHAGEDSESLGKNEGFFTRVAKSKFEKAMVLKMAREVGTEKMVSALAESVKPRLSGSKKPLDTFQEILLT---AVGKEGAAKKGMQFGFVCKPGALCVSINGKDAGTVRSGPLSAAMVDVYLGKKAVSPGARKDFAAGIAGLLER 850
            +S  REMR+ KA       LL             A DV    E ATK++FK+ +     S   L+G GVR K  GP  +KVY +G+YVD  G+   L  +  + + +    + FF  V    F K ++LKM   V  EKM  ALAES+KPR+SGS   +  F+++L+    A    G A  G +F F  +  +L V +NGK  GT+ S PL  A++  Y   K+V+P  +   A G   LLER
Sbjct:    1 SSSRREMRSLKAMLWTCCLLL-------------AVDVHARVEPATKVAFKDSL-----SGQPLVGVGVRKK--GP--IKVYGIGMYVDSLGSKMALSKYK-KHASAAELPKQFFEDVLGG-FGKTLLLKMVYGVSKEKMAGALAESIKPRMSGSLSAVAEFEQMLMAGCEAHAMGGRAAGGTEFQFAVRGSSLGVQVNGKKVGTISSKPLCQALLKCYFDGKSVAPSLKSTCAEG---LLER 216
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BLAST of mRNA_P-fluviatile_contig7.13584.1 vs. uniprot
Match: A0A8J5XVP0_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XVP0_DIALT)

HSP 1 Score: 97.1 bits (240), Expect = 1.860e-19
Identity = 60/180 (33.33%), Postives = 97/180 (53.89%), Query Frame = 2 
Query:  308 SASSLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAAKELVAHAGEDSESLGKNEGFFTRVAKSKFEKAMVLKMAREVGTEKMVSALAESVKPRLSGSK-KPLDTFQEILLTAVGKEGAAKKGMQFGFVCKPGALCVSINGKDAGTVRSGPLSAAMVDVYLGKKAVSPGARKDFAAGIAGLL 844
            + S L G G R K  GP  +K+Y+  +YV    A  +L    G   +++ K+  FF  +  S   K +VLKMA  +  EK+ SAL++SV+PR+ G     +  F   +L+    +G A  G +  F  +  ++C+++NGK  GTV+S  L  A++  Y+  KAVSP  ++  A G+  +L
Sbjct:   33 AGSKLAGLGTRYK--GP--LKIYSAAVYVSPSAAKFKLGKFKGVAPDAVKKD--FFEALVSSSAAKVIVLKMAMGISKEKLASALSDSVRPRMGGGDLDAVPKFAGAILSGFQPDGKAASGTELAFGLQGSSMCITVNGKKCGTVKSAKLVDALLKCYMDDKAVSPALKRSCAQGVLSML 206
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BLAST of mRNA_P-fluviatile_contig7.13584.1 vs. uniprot
Match: A0A830H745_9CHLO (Chalcone_isomerase domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830H745_9CHLO)

HSP 1 Score: 90.1 bits (222), Expect = 9.860e-17
Identity = 71/182 (39.01%), Postives = 92/182 (50.55%), Query Frame = 2 
Query:  323 MGTGVRVKKIGPAGVKVYAVGLYVDEKGAAKELVAHAGEDSESLGKNEGFFTRVAKSKFEKAMVLKMAREVGTEKMVSALAESVKPRLSG--------SKKPLDTFQEILLTAVGK-EGAAKKGMQFGFVCKPGALCVSINGKDAGTVRSGPLSAAMVDVYLGKKAVSPGARKDFAAGIAGL 841
            +G GVRVKKIGP  VKVYAV LYVD  GA       A  D+E+L              +E+ +V+K+ R V  +    ALA++++PR+          SKK  D F E      GK E  +   + +    KP  LCV  NGK   ++ S  L+ A+ DVYLGK  VSP A K F  GI  L
Sbjct:   83 VGAGVRVKKIGPVRVKVYAVALYVDANGAK------AANDAENL----------MTGSYERKVVVKLVRNVKADTFWGALADALRPRMGAKAFEGSEASKKLKDFFHE-----AGKLENGSAVTLHWK---KPSELCVGANGKKV-SIASKELATALFDVYLGKDPVSPPALKSFKEGIQKL 239
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13584.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 23
Match NameE-valueIdentityDescription
D7FP06_ECTSI4.120e-12082.91Chalcone Isomerase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835Z9G1_9STRA7.410e-7061.76Chalcone isomerase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A7R9YAW0_9STRA4.470e-4245.74Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6S9FSE1_HETAK4.740e-4146.53Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1XYD8_9STRA9.740e-4044.78Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S4J4F7_9EUKA8.700e-2639.70Hypothetical protein n=1 Tax=Prymnesium polylepis ... [more]
A0A7S0Q024_9EUKA8.640e-2437.81Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A7S0IHP3_9EUKA1.880e-2236.21Hypothetical protein n=1 Tax=Calcidiscus leptoporu... [more]
A0A8J5XVP0_DIALT1.860e-1933.33Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A830H745_9CHLO9.860e-1739.01Chalcone_isomerase domain-containing protein n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:2015849..2022239 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score362.5
Seed ortholog evalue1.5e-97
Seed eggNOG ortholog2880.D7FP06
EggNOG free text desc.Chalcone isomerase-like
EggNOG OGs2E0MF@1,2S81H@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionChalcone Isomerase-like
Ec32 orthologEc-05_001880.1
Exons7
Model size1605
Cds size699
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817128.6982548-UTR-P-fluviatile_contig7:2015848..20165971622817128.6982548-UTR-P-fluviatile_contig7:2015848..2016597Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 2015849..2016597 -
1693571231.1256964-UTR-P-fluviatile_contig7:2015848..20165971693571231.1256964-UTR-P-fluviatile_contig7:2015848..2016597Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 2015849..2016597 -
1622817128.7832568-UTR-P-fluviatile_contig7:2020848..20209431622817128.7832568-UTR-P-fluviatile_contig7:2020848..2020943Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 2020849..2020943 -
1693571231.1955562-UTR-P-fluviatile_contig7:2020848..20209431693571231.1955562-UTR-P-fluviatile_contig7:2020848..2020943Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 2020849..2020943 -
1622817128.793237-UTR-P-fluviatile_contig7:2022177..20222391622817128.793237-UTR-P-fluviatile_contig7:2022177..2022239Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 2022178..2022239 -
1693571231.2034152-UTR-P-fluviatile_contig7:2022177..20222391693571231.2034152-UTR-P-fluviatile_contig7:2022177..2022239Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 2022178..2022239 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817128.7106895-CDS-P-fluviatile_contig7:2016597..20167091622817128.7106895-CDS-P-fluviatile_contig7:2016597..2016709Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2016598..2016709 -
1693571231.139145-CDS-P-fluviatile_contig7:2016597..20167091693571231.139145-CDS-P-fluviatile_contig7:2016597..2016709Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2016598..2016709 -
1622817128.7221131-CDS-P-fluviatile_contig7:2017106..20172311622817128.7221131-CDS-P-fluviatile_contig7:2017106..2017231Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2017107..2017231 -
1693571231.148818-CDS-P-fluviatile_contig7:2017106..20172311693571231.148818-CDS-P-fluviatile_contig7:2017106..2017231Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2017107..2017231 -
1622817128.7335644-CDS-P-fluviatile_contig7:2017587..20176951622817128.7335644-CDS-P-fluviatile_contig7:2017587..2017695Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2017588..2017695 -
1693571231.159369-CDS-P-fluviatile_contig7:2017587..20176951693571231.159369-CDS-P-fluviatile_contig7:2017587..2017695Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2017588..2017695 -
1622817128.7447298-CDS-P-fluviatile_contig7:2018896..20189751622817128.7447298-CDS-P-fluviatile_contig7:2018896..2018975Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2018897..2018975 -
1693571231.170533-CDS-P-fluviatile_contig7:2018896..20189751693571231.170533-CDS-P-fluviatile_contig7:2018896..2018975Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2018897..2018975 -
1622817128.7574494-CDS-P-fluviatile_contig7:2020171..20202851622817128.7574494-CDS-P-fluviatile_contig7:2020171..2020285Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2020172..2020285 -
1693571231.1788728-CDS-P-fluviatile_contig7:2020171..20202851693571231.1788728-CDS-P-fluviatile_contig7:2020171..2020285Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2020172..2020285 -
1622817128.7715504-CDS-P-fluviatile_contig7:2020687..20208481622817128.7715504-CDS-P-fluviatile_contig7:2020687..2020848Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2020688..2020848 -
1693571231.1870923-CDS-P-fluviatile_contig7:2020687..20208481693571231.1870923-CDS-P-fluviatile_contig7:2020687..2020848Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 2020688..2020848 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13584.1prot_P-fluviatile_contig7.13584.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig7 2016598..2020848 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig7.13584.1

>prot_P-fluviatile_contig7.13584.1 ID=prot_P-fluviatile_contig7.13584.1|Name=mRNA_P-fluviatile_contig7.13584.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=233bp
MRAFKACTGAVGALLMGLLAQPSDLRAAAADVTEKATKISFKERVNLPGG
SASSLMGTGVRVKKIGPAGVKVYAVGLYVDEKGAAKELVAHAGEDSESLG
KNEGFFTRVAKSKFEKAMVLKMAREVGTEKMVSALAESVKPRLSGSKKPL
DTFQEILLTAVGKEGAAKKGMQFGFVCKPGALCVSINGKDAGTVRSGPLS
AAMVDVYLGKKAVSPGARKDFAAGIAGLLERS*
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mRNA from alignment at P-fluviatile_contig7:2015849..2022239-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig7.13584.1 ID=mRNA_P-fluviatile_contig7.13584.1|Name=mRNA_P-fluviatile_contig7.13584.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6391bp|location=Sequence derived from alignment at P-fluviatile_contig7:2015849..2022239- (Porterinema fluviatile SAG_2381)
GTTCCCTGCTCGAGCCCCCTATGCTCACGGCACGACCTTTTCCCTACCCT
GGCTGTGCAAGGGTAAGTAAGGGGAATCACGGGATGTATGTTGACGATGT
ACTTCAGATTTCCCCTGGTTGCATTGGGCGTGGATTGTTTGTCCTTGTTA
CTTTTCTCAGTCGCGGTTTTCTCTTACCCCCGCTCACACACTCATGCAGC
AACATGATCCATCACTGCAGCAACAACACATATCACCAGCACCTTTGGTG
CAAGGTCCGCTTCGTGAAGCTTTGCACCAGAAAGACGGCGATGACGGCAT
GAGTGGCTGTGGCTTGCAGAGATGCATCCGATCTACGCTGCGGCAGCACG
CACGTGCTCCGATGTCTGCACACGCAAACTTTCCTACATCAGGCTCAGAA
GATGTGACCCTTCAGTGAGGTTTATCACAGCAGTCAGCGCACAGCGACAC
ACATGACCGACAAATTTTGCCGCTGTCCTCTCTGTGTGCTATTTGTGGTG
ATGTTAGCTCCCTTCCGCTTTGAGCGAGGTTACCAACATATGTGACACAC
ACGCAGGAGGATGTTATGTGACACGAGATACCACACCCTCGGCCCTTGTT
TTCAAAGCTCCGTTTTTCCACATCACGGAGAGCGCCAATCCTTCCGATAT
TTGCACGGAAAGGTTGGAAATCGATAAAAATCAAGATTGTTAACGCCAAG
AACTTGGACATTATGTCGTAAGGGATGGGAGGACCGCTTTTCAGCTTGAT
TCATCCCGAAGAAGGGCACTCGTTGCCAGTGGTGCTTCCTATAGAAGCTG
AAAACCAACCCTCGAGACTAGTCAGCGCTGACTAGTCTCGAGGGTTGCTG
ACTAGTCTCGAGGGTTGATTTTCAGCTTCTTGTATACAAGTAAGTCGCGG
GGTCCGGATTCCCCTTGCACTACATTTCCGAGGAGGGTGGCGCTCCCCTT
GCCAGCCGATACTCTCCGTCTGCCAAGGGTTATTTTCACTTCCTTTTCCT
GCATGAAAAATGGCTACTTAATGTACCCAGCCGGGGTTCGAAGCCGCGAC
GTACTTTTATAGAAGCTGATAACCAACCCTCTTCACTAGTCAGCGCTGAC
TAGTCTAGAGGGTTGATTTTCAGCTTCTATATTCCCCTTTGACGCATCAT
CGTTCCTCCCCCGCGCACCCTTCCACAAGCCTCCCTCCTTCTCTCTCACT
CACCCTCTCTGCCTCTTTTTGTGTGCATGTCTCGCCCTGATTATCTCGCC
CCCCTCTCTCCTTTTCTCCCTCCATCTTCGGCTCCCCCGCCTGAAGACGA
AGACGACGACCACGACGACGATCAACGACACACGAGACAAGAGATACGCG
AGAGGAACGACTTTCCTAACAAAAACAGCCGAGCGAGGGAAATGAGAGCT
TTCAAGGCATGCACGGGGGCAGTGGGCGCGCTTTTGATGGGGCTTCTGGC
CCAACCAAGCGACCTCCGGGCCGCCGCGGCCGACGTCACCGAGAAGGCCA
CCAAGATCTCGTTCAAGGAGAGGGTCAACCTCCCTGGCGGGAGCGCAAGC
AGGTAAATTCGACAGAGAGCTAATGAGCGGGCTCGCCAGCAGGTACTAGT
GTAAGAGATGATATGTTGTGCATCCGCGGAGAGGAGGGAGGAGCATATCA
CGACGCACGCAGTGACAGACAAAAACTTGTACCCCCGAGACCGATATCCA
GAGCTCGATTTCTCAACGGTATGTACACTGACATTGATGGCTTTCAAAGG
GCAGGCCGTTCCTTGTCTTACACGACTGATTCGGCAGGATTTGGCGCCTT
GCGTGATATCGTGGAATCGAACCTCAGGGATTCGGTCCGGGGGGAGGCGG
GGTGGTATCGTGAACATTGACCTGGTTGTCCCCGCCCCCACGGTATCCTG
CACTCTGTGACTTGCGCGTTCGTGTGTATGCCTGAATATGCCGTCGCCAT
TCAGCCTCATGGGCACGGGGGTGAGGGTCAAGAAGATCGGCCCTGCCGGG
GTGAAGGTGTACGCCGTCGGTCTTTACGTCGACGAGAAGGGAGCAGCTAA
GGAGCTCGTCGCCCACGCGTGAGTTTTCGCGTTCGTGTTCTTCCCGTCGA
TTTTTTCTGATGAAACACGAAGAAGGCAACTTTGTCCCTGTTTGTGCGCG
CGTGCAGTCTAGCAACTGCGTCTGGCAAGCGCGCTTTATGCTTCACTTCC
GGATTTTGGGGGAGTGGTAGGGTCTACGAAGCAGGGATCATTTGGTCGAC
TTTCGGGGGAAAGATTAGAAGAGAATGAGAGTGCTGCTCCGATGGTCCAC
GGCCGAGACGAGCAAGGCGTGAGACTCGTGTGCGGCCCGGCGAAGAGCGG
GAGGATGGAGGTTCCGTAGCGAGGTGTGGGGTTGGATTCCGCGGAAGAGG
AGGAGAGACGGGTAACGGCGAGAATCGTCGTCGACCTGCGGCGTGGCGAG
AGGCGGGAGAAGATGAGTTGTCATCTCTATCGGTGCCATCCCGTGATATG
ATTATGTCTCGCATCGCTGCAAGGCCGGGAAGGGATCGGGCGTGGTACTT
TACCTCATTTGTTGGTGAGGTCGCGTTCAGGACTTCTTTGGTTGACCTCT
TAAAGCGCATTTACGGTGCCCCGAACGGGGCAGAGATGCGCCGTTCCTAA
TCCGGGCAGAGCAAAATAGCGAAGGTTTGGGCGCTCTCGATGCTCTTAGC
GTCTAAAGCGCGGGAGTTGGATTCTCGGCCGGCGTTCAGCGCATTAATTG
AAATCTTCCGTCATTTCTCGCCGGATGGTACTACAGTGGCTTTTTATGTT
GGTGCAGGCCGTGATGGCTATGGTGGTCAAGGTAGAATAGGTGTTGCTCC
TAAAGTTGCTTCGACCGTCGGAGTCGCGGCGGGATCGGTTTCGAAAAACT
GGTGATGGCCTTCCTCTCTTGTTGCATTGTCCGTCGATGCCGTCGGCGTT
GCTGCCAGTGTCGTGGCACCGCTCCTGCTCACGCCCCACCTGGTGAATAT
TTGGTGCGTCCCAGACCTGCATGCGTTTCTCGTTCAAGCGATAGCGTTGT
CGACGGTAATCTCCGCTTTGCCCATCGTGACGCGGTCGTGATCACCAACG
GTGAAGGCATTAGTTGAAGTGAAATATCACAACGCTTGGGCGAAAACGGC
GGCGTCACAACCGCTCCCTGGTTCGGTAAAAAACAGGGAATAAGAGTTAT
GATATGTCGTTGCCGCTTTGCTCCCGTCCACGCGTAACTTGGCAAATCAA
CAAAAACGGAGCAGAGGAGAGGATAGCGAGTCCCTGGGGAAGAATGAGGG
CTTCTTCACACGAGTGGCCAAGTCCAAGTTCGAGAAGGCGATGGTGAGTG
AGCATGTGGAAAATCGAGAGGGGAAAAGACATTTATGGAAGTATACAAGC
AAGCAAAGTTGCTGCACGTTCGGCGCACCGTGAGAGCCTTACTTAGGCTG
CCGCCTTAAAAGAGATACACCAAAACGCCTGTCTCATCCTAGCACACACC
GCCTATCGGGGGTTGTGGGGGTGGGGGGATGTTCGGTCGCGTCTTCATCT
GATCGCGCGCTAGGAGTGAGCTCTCTCACGAGAAGCGGTTTCGTGCGGTC
AGTGCTGGTGATGTGCAAGGCACGGCGCCTGCAGAGAGAAGTACTGATGC
AATACAGCCTCGCCCGCCGAGCAAGTGAGCGTTCGTGATTGGCCAGCGAT
TTCGCGCTGTCAGTGTTGATGCTGTGCGCGTCTTGGTACACGCAGGGGGA
ATAAACGGATGCACACGGCTTTCAGTGGGCTCATGTACGCTCACTTCGAA
GCAAAGCAAAGAACGGGGGTGGCGCCGCCATGACGGTCTGGTTTCGGAAC
CATGACATTCGTCGACGGGTTCGTGTTTTTTCGGGAGCCATAGATGGGCG
CAGCGGTTAGTTTGTAGGATACTACACCCTACCCTTTGGAGGTCCATTCG
ACGTTCGAAAAATGAAAGCTCACCAACCCGAGGCGACCGCGTTTCTTTTG
TTATGTTGTGGCGCTGTTTCGAGGCCGCAGTTCTACCTCAAGGCAAACGA
GGGTCTGCCTCTTTCGGGCATTTCATGGTAGTGCTATCGGCGTCTTCCTG
TGGTCACCCCGAATGGTCCTTAGGCATCTGGTGCTCGCCCCCTTGTTTGA
CGAACACAGCGGGGTGCCTCATAGCGTCGCTCGTTTTGTTCCAGATGTTG
CCGCCTTTATCACAACATTTTGTGTGAATGAAGAGGCACGCCCGCGCCAT
GCACGGCATTCGTCGTGCGGTTTACGTGCACCTGCAGCTGGCTGCTAGTG
ATTTATAGTTTGTCAGAAATAACTGCGTATTTTCGGATATTTGTTCTCTA
CATCGCCAAAAAATATTATGTCAGTGTGTTCTTTTCAATTGGTTGTTTAG
CTGTCCGAGCTTTGCCTGTCTTTTTTTGTTTGTTTTGCAAGCCACACCAA
CTTGCTTTCTACAGCTCTTGTGTTATCCTCCCTCTGATTGGAGGCGGGTG
TGTACCCTTGCCGTTTCCAACCGCCATGAACGCATCATTGTCAGGTGCTG
AAGATGGCCAGGGAGGTGGGAACGGAGAAGATGGTGAGCGCGCTCGCGGA
AAGTGTCAAGCCGCGCTTGTCTGGGTCGAAAAAACCGCTGGACACCTTTC
AGGTGCGCGCGTGAGCATCCCGTCCGGTCGCTTCAAGCAAGGTTTGGGTT
ATTTGCCTTGCAGTCGGCGGAGTGTGATGAGGCACTTTTTGATTTGTCGC
AACCTACCATTGGGCTATTCTTCCTATATCAGGAAGTTGACTTTCTACAA
AGGGTCTCTCTCTCTCTGTCTCTCTGTCTCTCTCTCTCTCTCTTTCATTT
TCATCAGCGATTTTCTGCTCTCTTTGCGTTTTTTTCGGGACCCTGACCCC
CCTCCCCCTGATTTACTACCGTGCCACCCCGTTTGACCTCTTTTATCCAT
CGCATTCGCGAACCTCTGCCGCCCCCCTCTCTGCCGCTCCCCTCTCCTTG
TATCGCAGGAAATTTTGCTCACGGCTGTGGGCAAGGAGGGCGCCGCTAAG
AAGGGGATGCAGTTTGGGTTCGTCTGCAAGCCGGGCGCGTTGTGTGTCAG
CATCAATGGCAAAGACGCTGGGACCGTGAGGAGGTATTTATGTTATGATT
TATCACCTGCGAGAAAACGGACGGTGAAAACGGAAAATCACGCACCTTGC
TACGTAAACGCCTGCCTAGAGTAATGACGGGAGAGTTCGGGGAACCATCG
GGAAGTCCACAAAGTGGCATCTTTCAATATAGAGTGGAAGGGGTCAACTC
GCAGGGTCATCTCTCTTGTAATCATTGCGCAACAACCTACCATTCACTAC
TGAAAATCATGTAGGGAATTAAGCACCAATCGCACATGGTTCCCGATTCT
CTTGCCTACATGTGTGAAGTGAACAGGAGAGGCGCAAACGACGATTCAAA
GAGTTGGACTCGTGTATTTGTTCTCGATATCAAGCACTCGCGTCCCCCCC
CCACGTCTTTGATGGCTTCCGTTTTTGCAGCGGACCACTTTCTGCCGCGA
TGGTGGATGTCTACCTCGGAAAGAAGGCCGTATCGCCGGGAGCACGGAAG
GACTTTGCCGCCGGCATTGCCGGCCTCCTCGAACGCTCGTAGTAGCTGCG
TGTCCATCATATTTGGCGCGAGCCATATCCCTCGTTTTGCGTAAAAAGCG
GCTGTTGTAGGTTACGTTCTTGTGTCGAACGGTGTCTGGGGGATAGGACT
CCAGTTGGCCGTTTTAGCAATAAAAAGTAGGGGAGAAAGCGCTGATTTTT
CCTGCCGGGCATGCGCGTACCGTGCGACCGCGTGGGTGGCGTCAGCGTGC
GAGCTTTCGTTGCGTCATGCGACAGCTTCGAAGCATTTCGAAGCTACTAG
CCCAACCGTGTAGAGCCAAGCCAAACGCTCGCGAAAATATCGTGTTGAGA
AAAAGGCTGTAGATCACACTTGACCTTAAGAGAGCAGCAGCGCTATTTCG
GTATTCCAGCCGTTTTAGGACATGAAATTGGTGTGCTGGTAAAGTTTCAG
TTTGCGACAACGTGTAGCCGTCCGCACCAACAGACAGTTGACATGCACCA
GGGTTTCTCCGCTCGCCACCAGGGGATGAAATGTCGAATTTATCCGAGAT
CTCGTTGGAGACCTTGTCGCCGACGCGGGTAGTGCCGTGATCCGGAGTGG
TAGGAAAGAAGTATTTGCTTTGAAGTCCATTTGAGGCTTCAGTTGTTGAC
GAAAGAATGTTGTGGAACATTTATGTCCGTCGCCGTTTGGTGTGGATTAG
AAATCCGGCTGGATGGAACGGTTTCGCGGGAGCTTGTCATAGCTCCTTTT
TTAAAAGCAAGGTTGACAGAACAGGTCGAATGAACAACGGG
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Coding sequence (CDS) from alignment at P-fluviatile_contig7:2015849..2022239-

>mRNA_P-fluviatile_contig7.13584.1 ID=mRNA_P-fluviatile_contig7.13584.1|Name=mRNA_P-fluviatile_contig7.13584.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1398bp|location=Sequence derived from alignment at P-fluviatile_contig7:2015849..2022239- (Porterinema fluviatile SAG_2381)
ATGAGAGCTTTCAAGGCATGCACGGGGGCAGTGGGCGCGCTTTTGATGGG
GCTTCTGGCCCAACCAAGCGACCTCCGGGCCGCCGCGGCCGACGTCACCG
AGAAGGCCACCAAGATCTCGTTCAAGGAGAGGGTCAACCTCCCTGGCGGG
AGCGCAAGCAGATGAGAGCTTTCAAGGCATGCACGGGGGCAGTGGGCGCG
CTTTTGATGGGGCTTCTGGCCCAACCAAGCGACCTCCGGGCCGCCGCGGC
CGACGTCACCGAGAAGGCCACCAAGATCTCGTTCAAGGAGAGGGTCAACC
TCCCTGGCGGGAGCGCAAGCAGCCTCATGGGCACGGGGGTGAGGGTCAAG
AAGATCGGCCCTGCCGGGGTGAAGGTGTACGCCGTCGGTCTTTACGTCGA
CGAGAAGGGAGCAGCTAAGGAGCTCGTCGCCCACGCCCTCATGGGCACGG
GGGTGAGGGTCAAGAAGATCGGCCCTGCCGGGGTGAAGGTGTACGCCGTC
GGTCTTTACGTCGACGAGAAGGGAGCAGCTAAGGAGCTCGTCGCCCACGC
AGGAGAGGATAGCGAGTCCCTGGGGAAGAATGAGGGCTTCTTCACACGAG
TGGCCAAGTCCAAGTTCGAGAAGGCGATGAGGAGAGGATAGCGAGTCCCT
GGGGAAGAATGAGGGCTTCTTCACACGAGTGGCCAAGTCCAAGTTCGAGA
AGGCGATGGTGCTGAAGATGGCCAGGGAGGTGGGAACGGAGAAGATGGTG
AGCGCGCTCGCGGAAAGTGTCAAGCCGCGCTTGTCTGGGTCGAAAAAACC
GCTGGACACCTTTCAGGTGCTGAAGATGGCCAGGGAGGTGGGAACGGAGA
AGATGGTGAGCGCGCTCGCGGAAAGTGTCAAGCCGCGCTTGTCTGGGTCG
AAAAAACCGCTGGACACCTTTCAGGAAATTTTGCTCACGGCTGTGGGCAA
GGAGGGCGCCGCTAAGAAGGGGATGCAGTTTGGGTTCGTCTGCAAGCCGG
GCGCGTTGTGTGTCAGCATCAATGGCAAAGACGCTGGGACCGTGAGGAGG
AAATTTTGCTCACGGCTGTGGGCAAGGAGGGCGCCGCTAAGAAGGGGATG
CAGTTTGGGTTCGTCTGCAAGCCGGGCGCGTTGTGTGTCAGCATCAATGG
CAAAGACGCTGGGACCGTGAGGAGCGGACCACTTTCTGCCGCGATGGTGG
ATGTCTACCTCGGAAAGAAGGCCGTATCGCCGGGAGCACGGAAGGACTTT
GCCGCCGGCATTGCCGGCCTCCTCGAACGCTCGTAGCGGACCACTTTCTG
CCGCGATGGTGGATGTCTACCTCGGAAAGAAGGCCGTATCGCCGGGAGCA
CGGAAGGACTTTGCCGCCGGCATTGCCGGCCTCCTCGAACGCTCGTAG
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