mRNA_P-fluviatile_contig7.13564.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig7.13564.1
Unique NamemRNA_P-fluviatile_contig7.13564.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig7.13564.1 vs. uniprot
Match: D8LMA1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA1_ECTSI)

HSP 1 Score: 440 bits (1131), Expect = 2.250e-141
Identity = 414/695 (59.57%), Postives = 471/695 (67.77%), Query Frame = 1 
Query:   16 QVRTLMRSVAELKKRLAIATAQGKDHRRSALIRAMRTRLREQELVVDVIKEELSIKTSMGREETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQALERLEARSVAP--------GTATTNGR-ELQXXXXXXXXX---ASTKELMRLSEALEEVDALRVSVRSRDAALRAQAEAVDQLQLENRELREAQERLARKERRARDLKKKNAELGERHTALLENHEAGARYIHHLKAQLLLRKEEAEAEADEFRELSLRQAEEVGVLLKREEELATALXXXXXXXXXXXXXXXXNSRQARGETSANSGRAEVAEKGLLVAEKDSMRLREKNDTMVAELERLGREAAEAAGLRERGRDLALENKRLMKEAEARQARLEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAGEARALLEEMEALLEAERKRTEQAAEDKRRLDSLLAAERQKGDQMGVAAAEAAAVAADDIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKRRKTGEGSGEGTRNDLTESDEIIKEMEADLREHV-------EEKRALGVQLEAAKKMAEQLRAANSLLTARLDAA----------ASTAAADAELEAAS--------PGFHSRRRPVHPSTSADDEERDLWAELAAAKVSEKAAKDACVALKLELDDALASCELQKNRVKDLLAKRVSGTIAD 1989
            +VR+LMRSVAELKKRLA+ATAQGKDHRRSA+IRAMRTRLREQ+LVVDVIKEEL +KT MG+EETNDWVIRKTVGGPLRFRPKTREELQNELYRLE+KYRQAL++L+ R            GT     R EL+   XXXX     AST+ELMRLSEALEEVDALRVSVRSRDAAL+AQAEA+DQLQLE R+LR  QE+L RKERRAR+LK+K+A LGE+HTALLE+ EA    + HLKAQL LRKEEA AEADEFRE SLRQAEEVGVLLKREEEL+TAL       XXXXXXXX   RQA         RAE AEK L V+ K   RLREKN TM+AEL+RLG+EA EAA                   AEARQ RLE         XXXXXXXXXXXXXXXXXXXXXXX   E + LL E  ALLEAE+K                                         XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   + T      G + DLTES+EII+EME++LRE         EE++AL +QLE+AKK A+ L A N+ LTA+L AA          A TA A+ E E AS        PG  S RRP+ P +SA+++E  L  EL AAK ++KAA++ CVALKLEL D  AS +L K RVK L+A + S  + D
Sbjct:   63 KVRSLMRSVAELKKRLALATAQGKDHRRSAMIRAMRTRLREQDLVVDVIKEELGLKTGMGKEETNDWVIRKTVGGPLRFRPKTREELQNELYRLERKYRQALDKLKTRRTGGDRDEGGVVGTTEERSRVELEGQGXXXXDTDQQASTRELMRLSEALEEVDALRVSVRSRDAALQAQAEAIDQLQLEKRDLRGVQEKLGRKERRARELKRKHANLGEQHTALLEDFEASQEQVDHLKAQLALRKEEALAEADEFREQSLRQAEEVGVLLKREEELSTALEEEVASRXXXXXXXXHADRQA-------VARAEAAEKSLQVSVKQETRLREKNKTMMAELQRLGKEAGEAAXXXXXXXXXXXXXXXXXXXAEARQGRLEEARQKGATAXXXXXXXXXXXXXXXXXXXXXXXXXXEMKVLLGEKLALLEAEKKXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDKDTERDDEAGKKFDLTESEEIIEEMESELREQADRVFSLEEEQQALKLQLESAKKAADDLSAKNAALTAQLKAAPATSPADPAAAVTAGAETEAEPASSRKLEESIPG--SPRRPLRPCSSAEEKEWQLGEELVAAKAAKKAAQNECVALKLELQDGKASGDLHKARVKALVADKDSFILDD 741
[Close]
BLAST of mRNA_P-fluviatile_contig7.13564.1 vs. uniprot
Match: A0A6G0XT65_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XT65_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.520e-21
Identity = 90/271 (33.21%), Postives = 152/271 (56.09%), Query Frame = 1 
Query:   16 QVRTLMRSVAELKKRLAIATAQGKDHRRSALIRAMRTRLREQELVVDVIKEELSIKTSMGREE---TNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQALERLE-ARSVAPGTATTNGRELQXXXXXXXXXASTKELMRLSEALEEVDALRVSVRSRDAALRAQAEAVDQLQLENRELREAQERLARKERRARDLKKKNAELGERHTALLENHEAGARYIHHLKAQLLLRKEEAEAEADEFRELSLRQAEEVGVLLKREEELATAL 816
            +VR LM+S+ +L++++A    Q K+HRRSALI+++R + REQ+L+VDV+KE L  K S  +++    N+++++KT+ GP RFRPKTREEL+ E   L+KKY++ L  L+ A++  P T      E +             EL+ + + LE    LRV+  +++ AL+AQ + +D L+    EL   +++L R + +    K+   +L +    L+++ E  +     L+A+L   KE  +       ++ +   E V  L  RE EL T L
Sbjct:   79 KVRALMKSIHQLQEQVATMKTQDKEHRRSALIQSLRKKQREQDLLVDVLKETLQAKVSEFQDDPNLVNEFILKKTISGPKRFRPKTREELELEFAELDKKYKRTLASLKKAKTEMPQTPRIQESEERTPAEPGP------ELVAMQKELE---TLRVAAAAKEIALQAQQDQIDGLRKRLEELHLVEDKLERTKTKYSASKEAIKKLQDDAIRLIQDKECESERRQQLEAELAFYKEATDTSEKNGDKVKMELMERVKALHAREAELLTQL 340
[Close]
BLAST of mRNA_P-fluviatile_contig7.13564.1 vs. uniprot
Match: W2RBF8_PHYPN (Uncharacterized protein n=8 Tax=Phytophthora parasitica TaxID=4792 RepID=W2RBF8_PHYPN)

HSP 1 Score: 107 bits (268), Expect = 6.130e-21
Identity = 84/195 (43.08%), Postives = 125/195 (64.10%), Query Frame = 1 
Query:   16 QVRTLMRSVAELKKRLAIATAQGKDHRRSALIRAMRTRLREQELVVDVIKEELSIKTSM---GREETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQALERLEA---RSVAPGTATTNGRELQXXXXXXXXXASTKELMRLSEALEEVDALRVSVRSRDAALRAQAEAVDQLQLENRELREAQERLARK 582
            +VR LMRS+ +L+++L    AQ K+HRRSALI+ +RT+ REQEL++DV+K+ L  K S     R   ND+V++KT GGP+RFRPKTREEL+NEL  L + +++ +E+L+    R+ AP        +  XXXXXXXXX  T      +   EE++ LR  V S+   + AQAE + ++  E  +LR  ++++ RK
Sbjct:   86 KVRALMRSINQLQEQLQGLKAQEKEHRRSALIQDLRTQQREQELLIDVLKQTLQEKVSEFQDSRALVNDFVLKKTAGGPMRFRPKTREELENELQTLGQNFQRTVEKLKQDSQRNAAPKEEKPYENDQXXXXXXXXXXXDTNNPTADAALYEELEQLRAQVASKSVTIHAQAEEMTEVYTELDKLRVVEDQIVRK 280
[Close]
BLAST of mRNA_P-fluviatile_contig7.13564.1 vs. uniprot
Match: A0A8K1CM85_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CM85_PYTOL)

HSP 1 Score: 107 bits (266), Expect = 1.140e-20
Identity = 89/285 (31.23%), Postives = 154/285 (54.04%), Query Frame = 1 
Query:   16 QVRTLMRSVAELKKRLAIATAQGKDHRRSALIRAMRTRLREQELVVDVIKEELSIKT---SMGREETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQALERLE-ARSVAPGTATT----NGRELQXXXXXXXXXAST----------KELMRLSEALEEVDALRVSVRSRDAALRAQAEAVDQLQLENRELREAQERLARKERRARDLKKKNAELGERHTALLENHEAGARYIHHLKAQLLLRKEEAEAEADEFRELSLRQAEEVGVLLKREEELATAL 816
            +VRTL+RS+ +L++++    +Q K+HRRSALI+ +R   REQE+++D++K+ L  K       RE  N+++++K+VGGP+RFRPK+REEL+NEL  L+ KY++A+E L+ A+   P  AT     N R+ Q          S           KE++      EE+D L+V + S+   + +Q + +++L      LR  +E++ RK+ +   L++K + +     +L+   E+       ++ +L   ++    +        LRQ E +  L  RE EL   L
Sbjct:   81 KVRTLLRSINQLQEQIQTLKSQDKEHRRSALIQNLRKSQREQEMLIDILKQTLLDKVPEFQESRELVNEYILKKSVGGPMRFRPKSREELENELEVLDNKYKRAVENLKKAKEARPRPATETDRRNKRQQQPESDEEVEDGSVDVRSRVSIVEKEVVTDPALQEEIDQLKVELASKTMTIHSQVDEINELYAXXERLRVLEEKVERKKEKIAVLEEKVSSMQLEQVSLVHEKESEMEKRLQVEEELQFVRDTRIEDVQTSDNERLRQLELIQSLRARETELQNQL 365
[Close]
BLAST of mRNA_P-fluviatile_contig7.13564.1 vs. uniprot
Match: A0A7S1C3S2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C3S2_9STRA)

HSP 1 Score: 97.4 bits (241), Expect = 1.860e-20
Identity = 53/99 (53.54%), Postives = 74/99 (74.75%), Query Frame = 1 
Query:   16 QVRTLMRSVAELKKRLAIATAQGKDHRRSALIRAMRTRLREQELVVDVIKEELSIKTSMGREETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYR 312
            +VR+LM+S+A L+ ++A  TA+ KDHRRS  I+A++ ++RE EL  DV+K EL  +  M  EE  D+V+RKTVGGP RFRPKTREEL+ ++  LEK+ R
Sbjct:   17 KVRSLMKSIATLRDKVATLTAESKDHRRSGQIQALKGKVREAELASDVLKAELRDRLGMTAEEVADFVVRKTVGGPKRFRPKTREELELQVSSLEKRVR 115
[Close]
BLAST of mRNA_P-fluviatile_contig7.13564.1 vs. uniprot
Match: A0A2D4C1R3_PYTIN (Aa_trans domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1R3_PYTIN)

HSP 1 Score: 107 bits (268), Expect = 1.940e-20
Identity = 89/248 (35.89%), Postives = 141/248 (56.85%), Query Frame = 1 
Query:   16 QVRTLMRSVAELKKRLAIATAQGKDHRRSALIRAMRTRLREQELVVDVIKEELSIKT---SMGREETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQALERL----EARSVAPGTA--------TTNGRELQXXXXXXXXXASTKE-----LMRLSEALEEVDALRVSVRSRDAALRAQAEAVDQLQLENRELREAQERLARKERRARDLKKKNAELGERHTALLENHEAGARYIHHLKAQL 699
            +VR+LMRS+ +L++++     Q K+HRRSALI+++R   REQEL++D++K+ L+ K       RE  ND++++K VG PLRFRPKTREEL+NEL  L+ KY++A+E L    E  S AP TA        +    E +         AS ++     ++      EE+D L+V + S+   +  QA+ + +L  E  +LR  +ERL RK+++   L+ K ++L + +  LL   E        L+ QL
Sbjct:   91 KVRSLMRSINQLQEQIQQLKTQDKEHRRSALIQSLRQSQREQELLIDILKQTLAEKVPEFQESRELVNDFILKKAVGAPLRFRPKTREELENELEVLDGKYKRAVENLQKVKEDASRAPATARGQRSIAESKRDDEDESPAIVSRQQASQQQPVAPVVITDPSLQEEIDRLKVELASKAMTIHTQADELHELMGELDKLRILEERLERKQQKITLLEDKVSQLQQDNVKLLHEKEVETEKNAELQEQL 338
[Close]
BLAST of mRNA_P-fluviatile_contig7.13564.1 vs. uniprot
Match: A0A1V9Z379_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z379_9STRA)

HSP 1 Score: 105 bits (262), Expect = 3.760e-20
Identity = 67/190 (35.26%), Postives = 114/190 (60.00%), Query Frame = 1 
Query:   16 QVRTLMRSVAELKKRLAIATAQGKDHRRSALIRAMRTRLREQELVVDVIKEELSIKTSMGREE---TNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQALERLEARSVAPGTATTNGRELQXXXXXXXXXAST--------------KELMRLSEALEEVDALRVSVRSRDAALRAQAEAVDQLQ 534
            +VR+LM+S+ +L+++++   +Q K+HRRSALI+++R + REQ+L++DV+KE L+ K    ++     N+++++KT+GGP RFRPKTREEL+ E   L+KKY++AL+   A+    G A     E+          +                +E   ++   EEVD LR+++ S+D  L AQ + ++ LQ
Sbjct:   71 KVRSLMKSIHQLQEQVSAMQSQDKEHRRSALIQSLRKKQREQDLLIDVLKESLATKAPEFQDSIPLVNEFILKKTLGGPKRFRPKTREELELEFLELDKKYKRALQN--AKLAKQGQAAKKADEVPAQDDPETVESDVVDQVIASGAEFKQFREYQEITALREEVDRLRITIASKDVNLNAQLQQIELLQ 258
[Close]
BLAST of mRNA_P-fluviatile_contig7.13564.1 vs. uniprot
Match: A0A8J5M0G0_9STRA (Uncharacterized protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M0G0_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.430e-19
Identity = 72/196 (36.73%), Postives = 120/196 (61.22%), Query Frame = 1 
Query:   16 QVRTLMRSVAELKKRLAIATAQGKDHRRSALIRAMRTRLREQELVVDVIKEELSIKTSM---GREETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQALERLEA---RSVAPGTATTNGRELQXXXXXXXXXASTKELMRLSEAL-EEVDALRVSVRSRDAALRAQAEAVDQLQLENRELREAQERLARK 582
            +VR LMRS+ +L++++    AQ K+HRRSALI+ +RT+ REQ+L++DV+K+ L  K S     R   ND+V++K+ GGP+RFRPKTREEL+NEL  L + +++ +E+ +    R+ AP     +  +            +T + +   EAL EE++ LR  + S+   + AQAE + ++  E  +L   ++++ RK
Sbjct:   86 KVRALMRSINQLQEQIQGLKAQEKEHRRSALIQDLRTQQREQDLLIDVLKQTLQEKVSEFQDSRALVNDFVLKKSAGGPMRFRPKTREELENELQALGQNFQRTVEKFKQDSQRNAAPKEEKPHDSDKGDEDEMTEEKNATNQNVAADEALYEELEQLRAQLASKSVTIHAQAEEMAEVYAELDKLTVVEDQIVRK 281
[Close]
BLAST of mRNA_P-fluviatile_contig7.13564.1 vs. uniprot
Match: A0A0W8D7H6_PHYNI (Lysosomal thioesterase PPT2-B n=2 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D7H6_PHYNI)

HSP 1 Score: 104 bits (260), Expect = 1.550e-19
Identity = 80/181 (44.20%), Postives = 116/181 (64.09%), Query Frame = 1 
Query:   16 QVRTLMRSVAELKKRLAIATAQGKDHRRSALIRAMRTRLREQELVVDVIKEELSIKTSM---GREETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQALERLEA---RSVAPGTATTNGRELQXXXXXXXXXASTKELMRLSEALEEVDALRVSVRSRDAALRAQAEAVDQLQLE 540
            +VR LMRS+ +L+++L    AQ K+HRRSALI+ +RT+ REQEL++DV+K+ L  K S     R   ND+V++KT GGP+RFRPKTREEL+NEL  L + +++ +E+L+    R+ AP        +  XXXXXXXXX  T      +   EE++ LR  V S+   + AQAE + ++  E
Sbjct:  416 KVRALMRSINQLQEQLQGLKAQEKEHRRSALIQDLRTQQREQELLIDVLKQTLQEKVSEFQDSRALVNDFVLKKTAGGPMRFRPKTREELENELQTLGQNFQRTVEKLKQDSQRNAAPKEEKPYENDQXXXXXXXXXXXDTNNPTADAALYEELEQLRAQVASKSVTIHAQAEEMTEVYTE 596
[Close]
BLAST of mRNA_P-fluviatile_contig7.13564.1 vs. uniprot
Match: A0A329RM55_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329RM55_9STRA)

HSP 1 Score: 103 bits (256), Expect = 1.910e-19
Identity = 72/196 (36.73%), Postives = 120/196 (61.22%), Query Frame = 1 
Query:   16 QVRTLMRSVAELKKRLAIATAQGKDHRRSALIRAMRTRLREQELVVDVIKEELSIKTSM---GREETNDWVIRKTVGGPLRFRPKTREELQNELYRLEKKYRQALERLEA---RSVAPGTATTNGRELQXXXXXXXXXASTKELMRLSEAL-EEVDALRVSVRSRDAALRAQAEAVDQLQLENRELREAQERLARK 582
            +VR LMRS+ +L++++    AQ K+HRRSALI+ +RT+ REQ+L++DV+K+ L  K S     R   ND+V++K+ GGP+RFRPKTREEL+NEL  L + +++ +E+ +    R+ AP     +  +            +T + +   EAL EE++ LR  + S+   + AQAE + ++  E  +L   ++++ RK
Sbjct:   86 KVRALMRSINQLQEQIQGLKAQEKEHRRSALIQDLRTQQREQDLLIDVLKQTLQEKVSEFQDSRALVNDFVLKKSAGGPMRFRPKTREELENELQALGQNFQRIVEKFKQDSQRNAAPKEEKPHDSDKGDGDEKTEEKNATNQNVAADEALYEELEQLRAQLASKSVTIHAQAEEMAEVYAELDKLTVVEDQIVRK 281
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13564.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LMA1_ECTSI2.250e-14159.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6G0XT65_9STRA3.520e-2133.21Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
W2RBF8_PHYPN6.130e-2143.08Uncharacterized protein n=8 Tax=Phytophthora paras... [more]
A0A8K1CM85_PYTOL1.140e-2031.23Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S1C3S2_9STRA1.860e-2053.54Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A2D4C1R3_PYTIN1.940e-2035.89Aa_trans domain-containing protein n=1 Tax=Pythium... [more]
A0A1V9Z379_9STRA3.760e-2035.26Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A8J5M0G0_9STRA1.430e-1936.73Uncharacterized protein n=1 Tax=Phytophthora aleat... [more]
A0A0W8D7H6_PHYNI1.550e-1944.20Lysosomal thioesterase PPT2-B n=2 Tax=Phytophthora... [more]
A0A329RM55_9STRA1.910e-1936.73Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:1729343..1740818 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score457.6
Seed ortholog evalue1e-125
Seed eggNOG ortholog2880.D8LMA1
EggNOG OGs2AQUH@1,2RZJQ@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorymitochondrion
Exons16
Model size2010
Cds size2010
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13564.1prot_P-fluviatile_contig7.13564.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig7 1729343..1740818 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817125.72345-CDS-P-fluviatile_contig7:1729342..17294831622817125.72345-CDS-P-fluviatile_contig7:1729342..1729483Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1729343..1729483 +
1693571225.3963785-CDS-P-fluviatile_contig7:1729342..17294831693571225.3963785-CDS-P-fluviatile_contig7:1729342..1729483Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1729343..1729483 +
1622817125.7380571-CDS-P-fluviatile_contig7:1729621..17297281622817125.7380571-CDS-P-fluviatile_contig7:1729621..1729728Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1729622..1729728 +
1693571225.4088092-CDS-P-fluviatile_contig7:1729621..17297281693571225.4088092-CDS-P-fluviatile_contig7:1729621..1729728Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1729622..1729728 +
1622817125.7515376-CDS-P-fluviatile_contig7:1730329..17304221622817125.7515376-CDS-P-fluviatile_contig7:1730329..1730422Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1730330..1730422 +
1693571225.4233453-CDS-P-fluviatile_contig7:1730329..17304221693571225.4233453-CDS-P-fluviatile_contig7:1730329..1730422Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1730330..1730422 +
1622817125.764029-CDS-P-fluviatile_contig7:1731031..17312001622817125.764029-CDS-P-fluviatile_contig7:1731031..1731200Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1731032..1731200 +
1693571225.4330895-CDS-P-fluviatile_contig7:1731031..17312001693571225.4330895-CDS-P-fluviatile_contig7:1731031..1731200Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1731032..1731200 +
1622817125.776419-CDS-P-fluviatile_contig7:1731828..17319821622817125.776419-CDS-P-fluviatile_contig7:1731828..1731982Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1731829..1731982 +
1693571225.442511-CDS-P-fluviatile_contig7:1731828..17319821693571225.442511-CDS-P-fluviatile_contig7:1731828..1731982Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1731829..1731982 +
1622817125.7887824-CDS-P-fluviatile_contig7:1732058..17320691622817125.7887824-CDS-P-fluviatile_contig7:1732058..1732069Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1732059..1732069 +
1693571225.4522994-CDS-P-fluviatile_contig7:1732058..17320691693571225.4522994-CDS-P-fluviatile_contig7:1732058..1732069Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1732059..1732069 +
1622817125.8022919-CDS-P-fluviatile_contig7:1732341..17324371622817125.8022919-CDS-P-fluviatile_contig7:1732341..1732437Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1732342..1732437 +
1693571225.462107-CDS-P-fluviatile_contig7:1732341..17324371693571225.462107-CDS-P-fluviatile_contig7:1732341..1732437Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1732342..1732437 +
1622817125.8140302-CDS-P-fluviatile_contig7:1732780..17329151622817125.8140302-CDS-P-fluviatile_contig7:1732780..1732915Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1732781..1732915 +
1693571225.479694-CDS-P-fluviatile_contig7:1732780..17329151693571225.479694-CDS-P-fluviatile_contig7:1732780..1732915Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1732781..1732915 +
1622817125.825947-CDS-P-fluviatile_contig7:1733254..17333471622817125.825947-CDS-P-fluviatile_contig7:1733254..1733347Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1733255..1733347 +
1693571225.4910944-CDS-P-fluviatile_contig7:1733254..17333471693571225.4910944-CDS-P-fluviatile_contig7:1733254..1733347Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1733255..1733347 +
1622817125.8431685-CDS-P-fluviatile_contig7:1734014..17341791622817125.8431685-CDS-P-fluviatile_contig7:1734014..1734179Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1734015..1734179 +
1693571225.5017111-CDS-P-fluviatile_contig7:1734014..17341791693571225.5017111-CDS-P-fluviatile_contig7:1734014..1734179Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1734015..1734179 +
1622817125.8598514-CDS-P-fluviatile_contig7:1735144..17353301622817125.8598514-CDS-P-fluviatile_contig7:1735144..1735330Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1735145..1735330 +
1693571225.5121353-CDS-P-fluviatile_contig7:1735144..17353301693571225.5121353-CDS-P-fluviatile_contig7:1735144..1735330Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1735145..1735330 +
1622817125.8759751-CDS-P-fluviatile_contig7:1736223..17364631622817125.8759751-CDS-P-fluviatile_contig7:1736223..1736463Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1736224..1736463 +
1693571225.5233712-CDS-P-fluviatile_contig7:1736223..17364631693571225.5233712-CDS-P-fluviatile_contig7:1736223..1736463Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1736224..1736463 +
1622817125.8915694-CDS-P-fluviatile_contig7:1736963..17370351622817125.8915694-CDS-P-fluviatile_contig7:1736963..1737035Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1736964..1737035 +
1693571225.5446196-CDS-P-fluviatile_contig7:1736963..17370351693571225.5446196-CDS-P-fluviatile_contig7:1736963..1737035Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1736964..1737035 +
1622817125.9082317-CDS-P-fluviatile_contig7:1738375..17385311622817125.9082317-CDS-P-fluviatile_contig7:1738375..1738531Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1738376..1738531 +
1693571225.5595665-CDS-P-fluviatile_contig7:1738375..17385311693571225.5595665-CDS-P-fluviatile_contig7:1738375..1738531Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1738376..1738531 +
1622817125.9230182-CDS-P-fluviatile_contig7:1739575..17396381622817125.9230182-CDS-P-fluviatile_contig7:1739575..1739638Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1739576..1739638 +
1693571225.5700626-CDS-P-fluviatile_contig7:1739575..17396381693571225.5700626-CDS-P-fluviatile_contig7:1739575..1739638Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1739576..1739638 +
1622817125.9375987-CDS-P-fluviatile_contig7:1740689..17408181622817125.9375987-CDS-P-fluviatile_contig7:1740689..1740818Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1740690..1740818 +
1693571225.5884562-CDS-P-fluviatile_contig7:1740689..17408181693571225.5884562-CDS-P-fluviatile_contig7:1740689..1740818Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1740690..1740818 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig7.13564.1

>prot_P-fluviatile_contig7.13564.1 ID=prot_P-fluviatile_contig7.13564.1|Name=mRNA_P-fluviatile_contig7.13564.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=670bp
MPSRLQVRTLMRSVAELKKRLAIATAQGKDHRRSALIRAMRTRLREQELV
VDVIKEELSIKTSMGREETNDWVIRKTVGGPLRFRPKTREELQNELYRLE
KKYRQALERLEARSVAPGTATTNGRELQQQQQQHHEEASTKELMRLSEAL
EEVDALRVSVRSRDAALRAQAEAVDQLQLENRELREAQERLARKERRARD
LKKKNAELGERHTALLENHEAGARYIHHLKAQLLLRKEEAEAEADEFREL
SLRQAEEVGVLLKREEELATALEEEVAARQREQREHHHNSRQARGETSAN
SGRAEVAEKGLLVAEKDSMRLREKNDTMVAELERLGREAAEAAGLRERGR
DLALENKRLMKEAEARQARLEEARERGAVAEEALRASKEVLEAEKRSKVA
LEREAGEARALLEEMEALLEAERKRTEQAAEDKRRLDSLLAAERQKGDQM
GVAAAEAAAVAADDIAIANAATSAAVAQAAAAEKAKEEAVQAKDQAVREK
DEAEKRRKTGEGSGEGTRNDLTESDEIIKEMEADLREHVEEKRALGVQLE
AAKKMAEQLRAANSLLTARLDAAASTAAADAELEAASPGFHSRRRPVHPS
TSADDEERDLWAELAAAKVSEKAAKDACVALKLELDDALASCELQKNRVK
DLLAKRVSGTIADPTSQVD*
back to top

mRNA from alignment at P-fluviatile_contig7:1729343..1740818+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig7.13564.1 ID=mRNA_P-fluviatile_contig7.13564.1|Name=mRNA_P-fluviatile_contig7.13564.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=11476bp|location=Sequence derived from alignment at P-fluviatile_contig7:1729343..1740818+ (Porterinema fluviatile SAG_2381)
ATGCCCTCGAGACTGCAGGTGCGAACTTTGATGAGAAGCGTGGCCGAGCT
GAAGAAGAGGCTCGCGATAGCCACTGCGCAGGGGAAAGACCACCGTCGCT
CCGCCCTCATCCGCGCCATGAGAACCAGGCTTCGGGAGCAGGTGGGATTT
GGACTGCCCCGGCGTACCACCTTCTCATTCTACGCAATGGAAGCTGTGAG
ATGTCACCAATGGGGACACTACACATTCTGCCGCAGTTTTCCACAATAAG
GGTGCTGCTGTGATGCGCACACAACGCAGGAGCTAGTGGTTGACGTCATC
AAGGAAGAGCTGAGCATCAAGACGAGCATGGGAAGGGAGGAAACGAACGA
CTGGGTCATCCGCAAGACCGTCGGGGGGCCTCTAAGGTAGCCAAAGCGAA
CGCGCGCACTTCTTCTTCCCCAATCACATCGTGGTGTTGCTACCTTATTC
GAAAGGATTCGATTCGCGATCCCCACCTGTTGCGTTGGTGTCGGATGCAC
ATGAAGACGCTGGCCAGTGCCTCCTACATGTACGCTCGTGTTGAGCTCAC
ACATATCTAGCATTGAACCCTCAAAAGCCATTTTTGATTCCTACGTGTCC
GCTGGAAATATTTGTCACTGCAGGCGTAACAACAAATTTCACGTTTTCGA
TGGAAGGGAAATCGTGCGTACAATACTGTGCTCTTGTAACACTCACTGCT
AAAATTTCAACAACAAAAACACATCAATTCCTTAAATCCCCGTCTCTGGG
AAACAAAGAACACATTCCTGTGCCTGCGGAGGCTGCAGGAAGTGCTGTTT
GATCGCGTACCCGAAAAAAAAAATCCATTTTCAGCGGTGGGCGCCAACGC
TCGCATTGTGTACAGGCCGCGAGTACACTAGAGCGCTGATACGAGAAGCT
GCAGATTTAAGGAAATCAGGCATGTCCAAGAAGGCGCGTCCATTTCTTTC
CAATGTCGTGTTTCTATTCCTTCGCCCCCTTGGGTAGATTTCGACCCAAG
ACTCGCGAGGAGCTCCAGAACGAGCTCTATCGATTGGAAAAGAAGTATCG
ACAGGCGCTGGAAAGGCTCGAGGCGAGGAGGTGCGAAAAATACACCTGAT
TTGTTCCTGCTGCGGTTCTTTGCCCCACCATTTCCTTCCCTCCCGGGCTA
CTGTATACTAGATTGCCTGCCCCCGGCAGGCCCCAATACTCCCTACGATT
AATGCCGGGACTCCTGTCCTGACGCAACTATATGTTTCTGCTTCACATGA
CGTGTTAGCCACTCACGGATTTTGAACGGTATGAGGACGGACCCGACGAT
CAGAGGAAATTTGGCGAAAGCATCGGACAACAAAAGCATGTGTTGTACCT
GAAAATTGGCCATTTAGCCCGAAAATCAACTCACAGTCTGCGTCACCGAC
GTACTTTCTCCACCGGCTTTCCCGCAGGACGGGCGGAGTTGTCGGTGCAG
CGGATGTCGAGCAGGCAACATCACTATGCGCGGCTCAGGTGCGATCGAGT
AAAGGCATTCAGAGATGTACTCGGACAGGGTCGGATGATAAATGGAATCG
ACGATCTGACAAATATACCGATAAGCGATATCTGTAGGGCTGACGAAAAC
ATTCCATGCCGGTATTTGGCCAAATGGTCGACGCATAAACTATCACAAAC
TGTCACCGCACCTGCAATATCTGTCGCACGGCGCCAGAGCGTCGCACCAG
GGACAGCTACCACGAATGGGAGAGAATTGCAGCAGCAGCAGCAACAGCAT
CATGAAGAGGCGAGCACAAAGGAGTTGATGCGACTCTCGGAGGCTCTGGA
GGAAGTGGATGCGCTTCGGGTGTCAGTTCGGAGCAGGGACGCCGCCCTTC
GTGCGCAGGTCGGCCCTCGTTTCCCTTTCGGATTGAATGATTTGCCTAAG
AGCGAAGGATGGAAGTGTTAAAGGTCGGGCAGGAAACCACTCGTACCACC
CGAAACGCTGTTGCAGGCGTTTGAGTGCTGAGGATTCATCGGCAATATTT
GTGGTGGTGATCTCCCGGCTGCAGCCCCTTTCGACCTCAGACCCCGGTTC
ACTTACAAACCATGTACTGTTCCTCCCTGAGCAAAGCCACGAGGAGATTC
CCATGTTTTTTTAACACAGGGGTGGGCCTGGGCCTTCCACCGAGGCGATA
ACAGTCATCGAGACCGACTTAGGAAACGGAGCGATGTAATGCAAGCCATC
GACTCAGCACGAGACCAGATATCAATTGGCCAGGAATTCGCACGGAAGAG
GACCCCTTGATTTTGTTGAAAGGCTTTTGTGAGATGCGTTGAAGCGTGTC
ATGTACGCGAAAACGGCAGAGTTCGACCCTGGCGAAGGCCCTGACCATGT
TGTGTCGAACAGTGCGAGGGTTTACAGCTCGTTCACATACGGCTTGGCGC
TCCAGACACTTGGAGAATCGAAGATAATTCCGGACGCTTTTCAGGATATT
GTCCCGTTCGCACCGCAACATGCCATTGGGTTCCAGGCGGAGGCCGTCGA
CCAGCTCCAGCTCGAAAATCGCGAGCTCAGGGAAGCCCAAGAGAGGCTGG
CGCGCAAGGAACGGCGGGCGCGGGACCTCAAGAAGAAAAACGCAGAGCTC
GGCGAGCGACACACGGCATTGTTGGAGAATCACGAGGCCGGTCAAGAGCA
GGCAAGCTGAACTTCGTTGACATCGAGCCGCAACCACCTTTGAAGAACAC
ACACCGCTGCGAGGAGGGGCACGGTATGTTCACGCTTTGGCCTCCGCTTT
GCCTCTGGCTTGAGGCCGCAGCTTTGCCTCTGGCTTGAGGCCGCAGCTTT
GCCTCTTTGCAACCCATCCATGTCGTTACCCCCTCTGGTAGACTGGGAAA
TGCACAAGGCGCGTCCCACATGCATATGCGGCACCAAAAATCTTCGCGCG
TGTTCTTTGCCAAAGGCAATGGTTGCGTGCTTTCTCTCGAGGTACTGACG
TTCGGTGCTCCGCGTTTCCGTGCCGCGATGTGAATCGAATGCGCACCAGA
TCCACCATCTCAAGGCCCAGCTGCTCTTGCGCAAGGAGGAGGCTGAGGCC
GAGGCGGATGAATTCAGAGAACTCTCTCTTAGGCAGGCGGAAGAGGTGAG
ACGAGGCGATTTCCAAGCGGCAGGCTTTTGATATCATTTTGGACGTCCAC
GCAATAAGACAACGACCCGCGGGAAGCGGCACGCGACGGATCGAGGCCGC
TCAGACCCCTCATAGTTTTCGTTTGGTTCTCGATTGCACGAAACTGAGAG
GGTGCGTTTCTGCAAACGACCGTGTCCTGGAACATCTCGTCGTCGGACCG
CCTCTGATGGGTCGCTCGAGCGTGAAAGTCTGCAAGGGTTCTAGACATTC
ACGTGTGTGAGAGAACAAGGCTCGCCTCTTCAACTGTTCTTCATCTCGAC
TGCTTGCCCTTGGTCGTGGCCGCCGTTGCGCCTGGTAGGTTGGCGTCTTG
CTCAAGCGAGAGGAAGAGCTCGCCACGGCTCTTGAGGAGGAGGTCGCCGC
GAGGCAGCGGGAGCAACGAGAGCACCACCACAACAGTCGACAGGCAAGGG
GGGAAACGTCCGCGAATTCCGGAGTGGCAGCCCTCCCGAAGTTTAGTTCG
CTAAAATAATTGTGGTCGCGAGCTCGTGAGGCGTCACAACATTTGTCCGT
ACACCTGGAATCATATTCCGAAGTCGGCGCGTTTCGCGTCTGCATTCCTT
GTTCCTCCTTTGCGGGCGACACCGACGGGCAAGTAGACACGCACACAAAA
AAAATGGTTTTCTTCGTGGCTTGGCTCCCAGGTGCTCGAACGTGCCCGCT
TCATGAGCAGTGACATCACCAACAAGGCACAAGTTCTGACTGCCGTCATC
CTGATGACACCCTCGCGCTTATTGTCGCGCCATCACGTTACTCCGCCTTG
TAGGTCACGCAGCGGGCGGAGGTCGCGGAGAAGGGTCTACTGGTCGCCGA
AAAGGATTCGATGAGGCTCCGTGAGAAAAATGACACCATGGTGGCAGAGC
TCGAGGTAGGCGCGGTGCAGCTTCCAAAATAGGCTGAACACGGAAGTGCG
GAGGCGGCAGCGAGAAACGGGTCAGACGACGCGCGAAGGGGATAAATTGA
CCTGGTGAAAGGAGTTAACATTCTGTCGCACTACAACAGGGAAAAAAGTC
CTGGTCGGAAAAAAACTCGACAGCTTGAAAGCTAAAACGGAGACAATGTG
TCGCCCGAGCGACTCCGAGAAACGATTTTTTTTCCCCCAGGAAAGAATTC
GCAAGTACGAGCCATCCAAGTATTGCACTCTACGCTGAGCAGTCCAACCC
TCAGGTAGGTGGATTCTTAGGCTTTCGGGCGAGAAAAGAGAGGATCGCTA
GCCTTATTTCACGCGCGCCGGGGGGGAAGGTCCTGGCGTCCCTCTTCCCG
CTCGCCTACAATATCATTTCTGCCTTTCATGACTCTTAGGGAAAAACCAG
CCCCAGAACGGCGGAATCGACGTCTGTGACCTGCTTCACGACCCCGAGAT
GTTCGCAGTATATCTTCGGTTTCAGTTGGCACACCGTTTGCTTCCCTCCC
ACCACCACACTCCCCCCCTCCGCGATGTTTTCGTTTCTCTGGCAATCCCA
CCACGCACACGACCTTTCTCACATCCGGTGCCGCCGCCGATATGTCGCAA
ACCGCGACGCGGGGGAAAATAGCGTCTGGGCAGGGAGGCGGCCGAGGCGG
CGGGACTACGGGAGCGCGGCCGGGACTTGGCACTAGAAAACAAGCGCCTG
ATGAAGGAAGCCGAGGCCCGGCAGGCCCGGCTAGAGGAGGCCCGTGAGAG
GGGCGCCGTGGCGGAGGAGGCTCTGCGCGCATCCAAGGTTTGTTTTGGAA
TAAGACAAAGAGAGCCAACGGGATAGGTGGGTGGGAGTGTTATCTGGCAC
AGGTGCTGTGCAAATAACGCTGATAAAGCCGCCTTGCTGAGGAGACGGCA
GGGGTCCGCAGGTATCCGCAGGCTGGAGGGTTTTATTCCGTGCGTACCTC
GAAAATAAAGGGTCGACGTATCGGATCAAGAGAGATCGCGTGTCCACTTT
GTTTTGAGACGATCGCTGTCGATCATATCGTATATGTTATTTTGCGTTAA
ACGCCCACGCCGGTCTTCGTCCCTGCACACTGCCTCGGTGGGTCGAGTGG
AAAGACCAAGTCCACGGCAGCCGTAGCCAACGCCGGCCCCTGCGGTGGCC
TGGTGTCCTTCACGGCTCCTAGCCCATCAAGAAGCGAAGCGTAGCGAAAC
ACGCAATGTTTGCTGTTGCTCACCCCGAAGTTAGAGACTTTTAATTTTTG
CTCGCGCCACAGATTCCCGAGACGATTGATTCACTCCGATTTTCCATGTC
TTCCGAAATGATCGGGAAATCACGCACGGTGGTGGAGATATCCGGTACCA
CAGGTACGCACACCGACGACGGCAATCAGCCAAATAATGCCGGTTGGCTA
GGCTTATCACCATGTCCGCGGCACGACGGAACAAGCCATGACTCAAATCA
CACGATGCAGCTGCGGCCCACTCGTCCTCTTGTCGCTTTTTTCCAGGCTG
AGTGTCCCCGAGTCCTTGTTGGAGAGCGGTCGGGAAAACCCTTTCTTGCT
CGAAGCACGACCCCTCGCTCCGTTGACGATCCCTCGCTCCATTGACTTAC
GACGATCGACGCTGTGTCCTCTACGGCGGCGAGCGGACTCTCCAGCTTGA
CTTCCTTCCTCGAGCCATTCCCTCCTATTTATTGTGCGTTTTTTTGCCGC
CGCCTTCTGGTTCACCTTTTTGTCGGTGACGGAATGGTGGGTACACGTAC
AGGAGGTTCTCGAGGCCGAGAAACGGAGCAAAGTTGCCTTAGAGCGCGAG
GCCGGCGAGGCGAGGGCCCTCCTGGAGGAGATGGAGGCGCTGCTGGAGGC
CGAGAGGAAGAGGACCGAGCAGGCGGCGGAGGACAAGCGGCGGCTCGACT
CTCTGCTCGCGGCCGAGCGCCAGAAGGGGGATCAGATGGTGCGTGAGCGA
GGCGTGGAGTGAGGCCAAGAAAGAGTGCGTAGGTTTGAAAACGGGCGTGA
GAGGGAGGACTTGTGGCGGTGAAACATGCGCCTCGCGAAGGGTACCGTAG
GCAAAAGCTACACAAGCATGGCGTGTGCGGAGACATTCATCGCCGCGACT
TGTGCCGGGAGGAACAAAAGGAGGGACAGGAAGAGCATAGGAGGACAGCA
TGTAGACCGGATAGTGGGTGGGAATGTGGTTTTCGATGATTCGGCTGTTT
GCGGAGCCGGCCAGTCTTAAGGCAGCATGGAGTCGTTTTCGCCGTCCAGA
AATATTGTTCCTGCGAAACCAAACGCCCATACCGTGAATGGTTTAAAGCA
TTGAAATGTTCCACCTCACGTTTTTGGCTAGTATCGGAAACAGGCTGGCT
CAAACGATATGCGCTCCGCAAGCCTCTTGCAAATATATGTATTATGGAGC
AAGAAATCGAGGTTCAGCTCTCGTGGGTTTTTGTTCAAGTGCAATACTTT
CCAGCGATAACATATGAAAGAAGGGCGCCGAAGCGAGACGCTGTCTTCCA
GCTTGACGAAGTTGAACTGCCATGTCGTACTCAGCTCCCCACGAAATGAC
GGACTCAAACACAAACAAATGTCGTCGCGTTCGACCGGATGTAGAGCCCG
GTGTATTCTTAAACGTTTTTACGCCGAGCTCGCGAATAAAGCCCGAAGCG
CAAGGAGGAGGGACGGAAGAAGAGAACAAGGGTGGTATCGGCGATTTTTA
AACTTTCGGCTAGGTATAGCAATCTCGAAGAATCAGTAATCAAACAAGCG
TCCACCGATACTGATAGCATCGGAAGTAAAGGTTGCTGCCTTTCCCGCGC
GCATCTGCCGGTCTCGATCTTTCCTCCACAGGGTGTAGCCGCCGCCGAAG
CCGCCGCAGTGGCCGCCGATGATATTGCGATCGCTAATGCCGCCACATCA
GCTGCCGTTGCCCAGGCAGCGGCGGCGGAGAAAGCGAAGGAAGAGGCCGT
GCAAGCGAAGGACCAGGCCGTGAGAGAGAAGGACGAGGCCGAAAAGCGGA
GGAAGACAGGCGAAGGCAGCGGCGAAGGGACGAGGAACGACTTGACCGAG
TCCGACGAGATTATCAAAGAGGTCAGTATTGCGCCCATCCATCGTCGGCT
GTGGATACTGCGAAGCATGTGGGGTGGACAGGGGGGAAGGGGACCATCCG
AAAATGCTCTAAGACGGTGCGGTAGCTCTTTTCCCGGGGCCGGTTTCTGA
TGACAAGGGATCCATGAGGGGTGAAATTGTGGACCACCGGTGTCTGAGCT
ACTCCTCGCAAAAAGTACCGCTGCTGCTGCTGCTGGTGTGTTCTCTGAGC
CGAAAGTGGAACTCAGAAACCACTGTTTTGCTCGGCGTGTCAGGTCGATC
CTAAGCTTGTCATCGAAACTTCGATCTGAAATTGCCCCCCAAGTCATCAC
TTTGACTCAAATATCGACGGGACGTCGAGAGAAACAAGAGCTTTATGGGC
TTCACTTCGATGCACCAACGATCATTTCAATGTGCGCGCACGTCGTGCTT
CGTCGAACACCCTCACTCCCTGCCCCTGTCACACCATGACGGCTGACGGT
GGGTGGGAATGGTCCCTGCAGATGGAGGCAGATCTCCGCGAGCACGTGGA
AGAAAAGCGCGCTTTGGGGGTCCAGCTGGAGGCCGCGAAAAAGGTAATCG
GATTTACGATTGTCTCTGTCGGCTGGGATTGGGCACGCCTCGACATGTTG
TGGTCAGCTGGCCGGCGATTTCGGAAGCGGAAGGTAATATCGCCATGAGT
TGAGCCGGGGTAGGGGGCGCGGGGGGCGGCAACAACACAAGGCAACACGA
CGAGGATCGTAAGTTGTATTGGCCAGCATCAACATAATCCCGGCCCTCGT
CCACGGCTGCCCGTAAGGACAGCGCGCGCCCTCCGCCCCACCGGTCTGGC
TCGTTGGCACCGGGAGTGTCGTTGCCGACGTGGGTGATTCGGTACTCGAT
TCGCGAAGGGTTGATCGTGGAGAACGATACCACACTACCGTAGGGAAAGG
ATAGGGCATCAGTTGCCCAATTTTCCGTTTTTGCGGAAACTTTCGTGAGA
AGTGGATTGAGCAAGTGTCCATTTCCGCGAGAATTTGCGTTTTACGTGGG
GGACCGTGCTTGACTCTCCTCCATGTCGGCGTGATCTTACGGCTTCACGC
ACTGGGAGTGTGTTCACGTGCTTGGGTCTCTCTGAACGATTTTGCCGGGA
AGTGGGCCATTCCGGTTCGGCTTCTTCGCCGAGCCGCTCTCGCCTGTTCT
TGCGGCACGCGCAAGTACGCATATTACTGGAGTGATCTAACACAGATATG
AGGGTGGGGCTCGGATGCTTTTGGCGGACGATTAGCAATCATTCTGAAAA
GGAACCCGTGTCGCGCCCAATTTTCGGTTCATAGTGAGGTACCATGAAGG
TTTCGGTTTAACTCGCGTGAATTCCAACACGCCCCCTTCGTGTGTGTGTG
TGCAGTGTTCTGCCCGCTTGAACTGTAAACGGAAGGGAGTACCTCCCAAT
CCTACTTGCAACACGAATTCTTTCTCCGTACTAAGGCTTACCTATGCAGC
CTGGACTTTACAATGCTACGTAGACGTAAACCTATGTACGGGAAAATGTC
ATTTCTGACGTCTTCGTCCGGGGAACGGTTTGCTTGTGTAGTAGCTCCAT
ATTTTGCGGTGCCCGATCTTTCCGCACAATGGACGGACTTCCTGCAAACC
GATTCTCCAGTACGTGGTCGAGAAGATTGAATAAGGCTGTTCCGACACTC
AATCACACTACAGTGGGGGGCCCGAAAAAGTGCGGGTATGAGAAAAGCGA
GTTCACCCGCACCATCGTAGGCTACCGCACTATTCAGCATGGGTACTATA
CAGGTCGTAATACTCCGTAGTGTCTGACAGCACTTTCATGCTAAATGAGT
TCACCCCCACGTGATCGGCACCCCAAACTATAGAACCCTCACTCTATCGC
CCCCCCTGCTGTATCGCCTTCCACATCTAGCAGATGGCAGAACAACTTCG
AGCGGCGAACTCATTGCTCACGGCACGGCTTGACGCGGCCGCCTCGACAG
CCGCCGCCGATGCTGAGCTCGAGGCCGCTTCGCCAGGATTTCACTCCCGC
CGTCGCCCTGTTCATCCCTCTACGTCGGCTGACGACGAGGTTTGCCAGGA
TGAGCGAAGACATCCGAGCACTTGCAGCGAACAATACCGACAGAGACTCT
GACAGCCCGATTTATTGACAGAAGGAAATCCGTTTTTTGCCGCGTTCCAG
GAGTTCGAGGGAACGGCGGGAGGTATTGGCTCAGAGAGATTTTCATCCAA
TAGTCAGGGGGTCTCTGCATCAAGAGGGGTCACATCACTTGTGTTTGAGC
GTTGCTCTGTTGTTTTCCCGTTCTTGTGATGGGTTCTCCTCCTCGTTTTC
TCGCCAGGAAACCAACCACCCTCGGAGTGATGCCAAATACTTTCGGTATC
GATGTACAAATTCCAATATTATAAGGAAGGATTTGCTGTCTTCATGTGCA
CGCCCAGATTCCAGAGTCCAGCTAAGACAGCAACAAGCTGCCACTCATTC
AGGCGTGATGTCACCCCATTCGATGACCGTGAAAGTCGATTGTGACCCTA
ACCCAAAGCGCTCAGCGGAGAATACTCGGAGGTACGTACCTCCCCGCGCC
TTGGACTTAGCCGAATCTTGGGCTTTGGCTTGGGAGTTTTGCCTGCGGGC
AATCTTGGTTGCATCTTGAGCTTGTGCTTGCAAGCGATATAGACTATATG
TGAAGTGGGCCTTCTCATTGTTATCCCCATGGTCGGGTCGCAATCCCCGG
ATGAGTTTAGTCGCCTGAGCGAAGGCTTGGGGGCCAGCGTTGCCGGAGAA
GTTCCGCCGGACACGGTGTACCCCGGACCCGAACAGCTGCGAATTGGCTG
CCTCCAACAATTTTTCTTCCGGTGCGACATGAAATTCCGAAGCGTTCGCG
ACAGGGCGGAGAAAAAAATACAACAAGACCATGGCCGCCGCTTTACAACA
CCGCTTGTAACATTTCCTCGTGCTTTCAAGGATGATGATATCTCTACGAG
AGGACCTACGGAAGTGCAACCTAAGCTCTGCTCTTCACCGCCGAAGGAAT
GCCAAGGAACGCTGAGCTAATCAAACCACAACCCCTAATCCCCCGCTCTG
TCCGTCTTGCGAACCCCCGAAAATATGGCGCAGGAGCGTGACCTCTGGGC
GGAATTGGCGGCCGCGAAAGTCTCCGAAAAAGCGGCAAAAGATGCGGTGA
GTATGGTGCAAAATTGCGTGAAACATCTGCGTGACTATCCTGATTGATAT
CGCGCAAAGGAGCACCGAGCCGCGTTTGCGTGCTGCATCTTAGCATTTTT
TTGTTTTTTTTCTTCGTCCGATCAGAGCGTCGATTGTGGCACAGAGCGGC
CAACCACGATCGTCAGCTAAGCCTTGGTTTATCTCACGATGCCGCGCGCG
CTATACCATGAAGTGCCAGTGATAGACATGAGCTGCATATGAAGGTTAAG
CGATGGAATCGACGACGAAACTCTCCATGCTCCCTGCCGGACAAGCCAAC
AAGCACAACGAATCTCTGCCCACGGGGCGCGCACCAAGGCTTCAGAATTC
ACAACGATCGGTACTCGCCTCATTTGTGCATGTGCAATCTGTCTGCCACG
CCGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTTGTT
GTTGTTGTTGTTGTTGCTGTTGTGCATTTGCATGGTCACCCATTCCGAAT
TTTTTTTTGGCGGTTACCAACAATACATCCCGGAGATGCCGTCTTACAAC
CCCAGAGAGCAAAAATCACCATCAGGTGTGTCATTTGCCTGTCGACAGGC
TCACCGGTTGCGCTCGCGTGTATCCAAAAGGATCGAACACAGATTCCGCC
GTCGCTGAATGCCCGACCACTTTTTTTCCCGCGATCTCGAGGTAGTGATA
CGAGCGCAATCTTGACGCAACGCGACCCAGGACGGCTACAGCAGCAGGAG
TGTTATGTCCTGTAACACTCGATCTACACAATCGACTTCCGGTCTAGCCG
AAGCGTGAAATTTCAGAATGAATAAACGCAAGTAAGCATTGGCAAGAACT
GGATCGCAAAAGCACAGGGTCGTTCAAGGGGCTCAAACTTTCCCAAGGGC
TTCAGAATTTCAATGGAACTCTAATCCAGCAGAGAGCGGATGCGATTCAA
CCGCGAACGCCGTCGAACGCCGTCGACAGTCAAATTACGCAACAACTTTC
CCCGCGCTGGGTTTCCACTGTGTTCCACGTGTATCGTCCTACGCCAGTGT
GTGGCCCTGAAGCTGGAGCTCGACGATGCTCTCGCGAGCTGTGAGCTGCA
GAAGAACAGGGTCAAGGATCTGCTTGCAAAAAGGGTCTCCGGCACAATCG
CAGACCCAACGAGCCAGGTTGATTAA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig7:1729343..1740818+

>mRNA_P-fluviatile_contig7.13564.1 ID=mRNA_P-fluviatile_contig7.13564.1|Name=mRNA_P-fluviatile_contig7.13564.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=4020bp|location=Sequence derived from alignment at P-fluviatile_contig7:1729343..1740818+ (Porterinema fluviatile SAG_2381)
ATGCCCTCGAGACTGCAGGTGCGAACTTTGATGAGAAGCGTGGCCGAGCT
GAAGAAGAGGCTCGCGATAGCCACTGCGCAGGGGAAAGACCACCGTCGCT
CCGCCCTCATCCGCGCCATGAGAACCAGGCTTCGGGAGCAGATGCCCTCG
AGACTGCAGGTGCGAACTTTGATGAGAAGCGTGGCCGAGCTGAAGAAGAG
GCTCGCGATAGCCACTGCGCAGGGGAAAGACCACCGTCGCTCCGCCCTCA
TCCGCGCCATGAGAACCAGGCTTCGGGAGCAGGAGCTAGTGGTTGACGTC
ATCAAGGAAGAGCTGAGCATCAAGACGAGCATGGGAAGGGAGGAAACGAA
CGACTGGGTCATCCGCAAGACCGTCGGGGGGCCTCTAAGGAGCTAGTGGT
TGACGTCATCAAGGAAGAGCTGAGCATCAAGACGAGCATGGGAAGGGAGG
AAACGAACGACTGGGTCATCCGCAAGACCGTCGGGGGGCCTCTAAGATTT
CGACCCAAGACTCGCGAGGAGCTCCAGAACGAGCTCTATCGATTGGAAAA
GAAGTATCGACAGGCGCTGGAAAGGCTCGAGGCGAGGAGATTTCGACCCA
AGACTCGCGAGGAGCTCCAGAACGAGCTCTATCGATTGGAAAAGAAGTAT
CGACAGGCGCTGGAAAGGCTCGAGGCGAGGAGCGTCGCACCAGGGACAGC
TACCACGAATGGGAGAGAATTGCAGCAGCAGCAGCAACAGCATCATGAAG
AGGCGAGCACAAAGGAGTTGATGCGACTCTCGGAGGCTCTGGAGGAAGTG
GATGCGCTTCGGGTGTCAGTTCGGAGCAGGGACGCCGCCCTTCGTGCGCA
GCGTCGCACCAGGGACAGCTACCACGAATGGGAGAGAATTGCAGCAGCAG
CAGCAACAGCATCATGAAGAGGCGAGCACAAAGGAGTTGATGCGACTCTC
GGAGGCTCTGGAGGAAGTGGATGCGCTTCGGGTGTCAGTTCGGAGCAGGG
ACGCCGCCCTTCGTGCGCAGGCGGAGGCCGTCGACCAGCTCCAGCTCGAA
AATCGCGAGCTCAGGGAAGCCCAAGAGAGGCTGGCGCGCAAGGAACGGCG
GGCGCGGGACCTCAAGAAGAAAAACGCAGAGCTCGGCGAGCGACACACGG
CATTGTTGGAGAATCACGAGGCCGGCGGAGGCCGTCGACCAGCTCCAGCT
CGAAAATCGCGAGCTCAGGGAAGCCCAAGAGAGGCTGGCGCGCAAGGAAC
GGCGGGCGCGGGACCTCAAGAAGAAAAACGCAGAGCTCGGCGAGCGACAC
ACGGCATTGTTGGAGAATCACGAGGCCGGGGCACGGTATGGGCACGGTAT
ATCCACCATCTCAAGGCCCAGCTGCTCTTGCGCAAGGAGGAGGCTGAGGC
CGAGGCGGATGAATTCAGAGAACTCTCTCTTAGGCAGGCGGAAGAGATCC
ACCATCTCAAGGCCCAGCTGCTCTTGCGCAAGGAGGAGGCTGAGGCCGAG
GCGGATGAATTCAGAGAACTCTCTCTTAGGCAGGCGGAAGAGGTTGGCGT
CTTGCTCAAGCGAGAGGAAGAGCTCGCCACGGCTCTTGAGGAGGAGGTCG
CCGCGAGGCAGCGGGAGCAACGAGAGCACCACCACAACAGTCGACAGGCA
AGGGGGGAAACGTCCGCGAATTCCGGAGTTGGCGTCTTGCTCAAGCGAGA
GGAAGAGCTCGCCACGGCTCTTGAGGAGGAGGTCGCCGCGAGGCAGCGGG
AGCAACGAGAGCACCACCACAACAGTCGACAGGCAAGGGGGGAAACGTCC
GCGAATTCCGGACGGGCGGAGGTCGCGGAGAAGGGTCTACTGGTCGCCGA
AAAGGATTCGATGAGGCTCCGTGAGAAAAATGACACCATGGTGGCAGAGC
TCGAGCGGGCGGAGGTCGCGGAGAAGGGTCTACTGGTCGCCGAAAAGGAT
TCGATGAGGCTCCGTGAGAAAAATGACACCATGGTGGCAGAGCTCGAGCG
TCTGGGCAGGGAGGCGGCCGAGGCGGCGGGACTACGGGAGCGCGGCCGGG
ACTTGGCACTAGAAAACAAGCGCCTGATGAAGGAAGCCGAGGCCCGGCAG
GCCCGGCTAGAGGAGGCCCGTGAGAGGGGCGCCGTGGCGGAGGAGGCTCT
GCGCGCATCCAAGCGTCTGGGCAGGGAGGCGGCCGAGGCGGCGGGACTAC
GGGAGCGCGGCCGGGACTTGGCACTAGAAAACAAGCGCCTGATGAAGGAA
GCCGAGGCCCGGCAGGCCCGGCTAGAGGAGGCCCGTGAGAGGGGCGCCGT
GGCGGAGGAGGCTCTGCGCGCATCCAAGGAGGTTCTCGAGGCCGAGAAAC
GGAGCAAAGTTGCCTTAGAGCGCGAGGCCGGCGAGGCGAGGGCCCTCCTG
GAGGAGATGGAGGCGCTGCTGGAGGCCGAGAGGAAGAGGACCGAGCAGGC
GGCGGAGGACAAGCGGCGGCTCGACTCTCTGCTCGCGGCCGAGCGCCAGA
AGGGGGATCAGATGGAGGTTCTCGAGGCCGAGAAACGGAGCAAAGTTGCC
TTAGAGCGCGAGGCCGGCGAGGCGAGGGCCCTCCTGGAGGAGATGGAGGC
GCTGCTGGAGGCCGAGAGGAAGAGGACCGAGCAGGCGGCGGAGGACAAGC
GGCGGCTCGACTCTCTGCTCGCGGCCGAGCGCCAGAAGGGGGATCAGATG
GGTGTAGCCGCCGCCGAAGCCGCCGCAGTGGCCGCCGATGATATTGCGAT
CGCTAATGCCGCCACATCAGCTGCCGTTGCCCAGGCAGCGGCGGCGGAGA
AAGCGAAGGAAGAGGCCGTGCAAGCGAAGGACCAGGCCGTGAGAGAGAAG
GACGAGGCCGAAAAGCGGAGGAAGACAGGCGAAGGCAGCGGCGAAGGGAC
GAGGAACGACTTGACCGAGTCCGACGAGATTATCAAAGAGGGTGTAGCCG
CCGCCGAAGCCGCCGCAGTGGCCGCCGATGATATTGCGATCGCTAATGCC
GCCACATCAGCTGCCGTTGCCCAGGCAGCGGCGGCGGAGAAAGCGAAGGA
AGAGGCCGTGCAAGCGAAGGACCAGGCCGTGAGAGAGAAGGACGAGGCCG
AAAAGCGGAGGAAGACAGGCGAAGGCAGCGGCGAAGGGACGAGGAACGAC
TTGACCGAGTCCGACGAGATTATCAAAGAGATGGAGGCAGATCTCCGCGA
GCACGTGGAAGAAAAGCGCGCTTTGGGGGTCCAGCTGGAGGCCGCGAAAA
AGATGGAGGCAGATCTCCGCGAGCACGTGGAAGAAAAGCGCGCTTTGGGG
GTCCAGCTGGAGGCCGCGAAAAAGATGGCAGAACAACTTCGAGCGGCGAA
CTCATTGCTCACGGCACGGCTTGACGCGGCCGCCTCGACAGCCGCCGCCG
ATGCTGAGCTCGAGGCCGCTTCGCCAGGATTTCACTCCCGCCGTCGCCCT
GTTCATCCCTCTACGTCGGCTGACGACGAGATGGCAGAACAACTTCGAGC
GGCGAACTCATTGCTCACGGCACGGCTTGACGCGGCCGCCTCGACAGCCG
CCGCCGATGCTGAGCTCGAGGCCGCTTCGCCAGGATTTCACTCCCGCCGT
CGCCCTGTTCATCCCTCTACGTCGGCTGACGACGAGGAGCGTGACCTCTG
GGCGGAATTGGCGGCCGCGAAAGTCTCCGAAAAAGCGGCAAAAGATGCGG
AGCGTGACCTCTGGGCGGAATTGGCGGCCGCGAAAGTCTCCGAAAAAGCG
GCAAAAGATGCGTGTGTGGCCCTGAAGCTGGAGCTCGACGATGCTCTCGC
GAGCTGTGAGCTGCAGAAGAACAGGGTCAAGGATCTGCTTGCAAAAAGGG
TCTCCGGCACAATCGCAGACCCAACGAGCCAGGTTGATTAATGTGTGGCC
CTGAAGCTGGAGCTCGACGATGCTCTCGCGAGCTGTGAGCTGCAGAAGAA
CAGGGTCAAGGATCTGCTTGCAAAAAGGGTCTCCGGCACAATCGCAGACC
CAACGAGCCAGGTTGATTAA
back to top