mRNA_P-fluviatile_contig7.13549.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig7.13549.1
Unique NamemRNA_P-fluviatile_contig7.13549.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig7.13549.1 vs. uniprot
Match: D7FP22_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP22_ECTSI)

HSP 1 Score: 600 bits (1547), Expect = 8.110e-209
Identity = 300/389 (77.12%), Postives = 332/389 (85.35%), Query Frame = 1
Query:    1 PLYKLDGNSSSSTTAGAGGRTYPKLTDP--------PPRRRLQHQGSLHALKEERRLEEMILKVADKSPPWLADFLKAFAPFITLTFTVANIMGPVVIKFYTFLYKVYKILPVNVLGMIYGLVMCFFGGFFQVTIAAIEAFNMTGGEKVWLCVYDLKEDMKTLHHESKKDDERDDDRDGIPDVQQISAEKLLTRKTALALRIVDPDRATNAITGVWQGYMGVLVVLKFRFARVVALAVSIGNSLRPIVAKVFGPALSFVIPREYHQASLHSQNWIAPMINYFCKTVAMMVAWWIQRFISTVQSAIKGGLLFARSFMCFVSEVTPLNLDPDRSFFDEILGWTVAAAGAYFQISINWDLPWIVDLLLWPAYLLETFLKWSVTWMDVPVQPA 1143
            PL+ LDG S S    GA    YP +T P        P +  LQH GS+ A  E+RR+E+MILKVA KSPPWLA+FL+AFAPF+TLTFT+ANI+GPVV++FY  LYKVYKILPVNVLGMIYGLVMCFFGGFF VTIAAIEAFNMTGGEKV LCV+DLK+D+K LH+ SK+DD+RDDD DGIPDV+QIS EKLLTRKTALALR+++PDRATNAITG+WQGYMGVLVVLKFRFA+VVALAVSIGN+LRPIVAK+FGPAL+FVIPREYHQ       WIAPMINYFCK VAM VAWWIQR ISTVQSAIKGGLLF+RS M FVSEVTPL LDPD SF DE+LGWT+AA GAYFQ SINWDLPW VDL LWPAYLLETFLKWSVTWMDVP QPA
Sbjct:   14 PLFSLDGGSGSXXXXGA----YPSVTAPTSSYTRPTPRKVELQHHGSIQAFNEDRRVEDMILKVAGKSPPWLANFLRAFAPFVTLTFTIANIVGPVVVRFYALLYKVYKILPVNVLGMIYGLVMCFFGGFFHVTIAAIEAFNMTGGEKVMLCVHDLKQDIKALHYASKEDDKRDDDHDGIPDVKQISPEKLLTRKTALALRVINPDRATNAITGIWQGYMGVLVVLKFRFAKVVALAVSIGNNLRPIVAKIFGPALAFVIPREYHQ-------WIAPMINYFCKFVAMTVAWWIQRLISTVQSAIKGGLLFSRSLMYFVSEVTPLKLDPDHSFLDEVLGWTLAACGAYFQTSINWDLPWAVDLFLWPAYLLETFLKWSVTWMDVPAQPA 391          
BLAST of mRNA_P-fluviatile_contig7.13549.1 vs. uniprot
Match: A0A835Z0S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0S9_9STRA)

HSP 1 Score: 339 bits (870), Expect = 1.700e-107
Identity = 171/344 (49.71%), Postives = 237/344 (68.90%), Query Frame = 1
Query:   94 RRLQHQGSLHALKEERRLEEMILKVADKSPPWLADFLKAFAPFITLTFTVANIMGPVVIKFYTFLYKVYKILPVNVLGMIYGLVMCFFGGFFQVTIAAIEAFNMTGGEKVWLCVYDLKEDMKTLHHESKKDDERDDDRDGIPDVQQISAEKLLTRKTALALRIVDPDRATNAITGVWQGYMGVLVVLKFRFARVVALAVSIGNSLRPIVAKVFGPALSFVIPREYHQASLHSQNWIAPMINYFCKTVAMMVAWWIQRFISTVQSAIKGGLLFARSFMCFVSEVTPLNLDPDRSFFDEILGWTVAAAGAYFQISINWDLPWIVDLLLWPAYLLETFLKWSVTWMD 1125
            RR    GSL   +E  R+E+++ K  DK+PP L +  K  APFI     V N++GP +IK Y+ L+ +YK LP NV+ M+ GL   FFGG F VT AAIEAF   GG  V+  + DLK D   +   +KKDDE DD+++GI DV++I + +L++RK  L LR VDPDR  +A+ G+++G+ GVLVVL+FRFARV+ALAVSI + +RP+ +++  P L+F+IP+EYH+       WI+ MIN  C+TVA  +AW IQR +ST+QSAIKGGL+FAR+ + F+ E   ++ D + ++ DEILGW +AA G Y QI +NW+LP +VDL LWP ++ E  L WSVTWMD
Sbjct:    4 RRQSTVGSLQDEREVHRMEKLLGKFKDKTPPALVNLFKLLAPFIKAFCVVLNVVGPYIIKLYSALFAIYKRLPKNVVAMLLGLAFTFFGGLFAVTFAAIEAFRELGGSDVYTALEDLKIDFDIVQTANKKDDEVDDNKNGIKDVKEIPSHQLVSRKLLLVLRSVDPDRVNHAMAGLYKGFTGVLVVLRFRFARVIALAVSIADHMRPLASRILAPPLAFLIPKEYHK-------WISTMINVLCRTVATTIAWKIQRVLSTIQSAIKGGLMFARALVRFLHENRIISFDDESTYLDEILGWALAAGGIYVQIHMNWNLPLLVDLFLWPLHVSERVLIWSVTWMD 340          
BLAST of mRNA_P-fluviatile_contig7.13549.1 vs. uniprot
Match: A0A7S2VT12_9DINO (Hypothetical protein (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2VT12_9DINO)

HSP 1 Score: 258 bits (660), Expect = 2.280e-76
Identity = 130/327 (39.76%), Postives = 203/327 (62.08%), Query Frame = 1
Query:  112 GSLHALKEERRLEEMILKVADKSPPWLADFLKAFAPFITLTFTVANIMGPVVIKFYTFLYKVYKILPVNVLGMIYGLVMCFFGGFFQVTIAAIEAFNMTGGEKVWLCVYDLKEDMKTLHHESKKDDERDDDRDGIPDVQQISAEKLLTRKTALALRIVDPDRATNAITGVWQGYMGVLVVLKFRFARVVALAVSIGNSLRPIVAKVFGPALSFVIPREYHQASLHSQNWIAPMINYFCKTVAMMVAWWIQRFISTVQSAIKGGLLFARSFMCFVSEVTPLNLDPDRSFFDEILGWTVAAAGAYFQISINWDLPWIVDLLLWPAYLLE 1092
            GSL   +E  RLE++ + ++D +PPW A ++K  AP + L   +  +MGP+V  FY  LY+VY+ LP N    ++GL +CFFGG + +++AA+EAF + GG+ + + +  L++    +   S++DD+ D D DG+ DV+Q+ A +L +RK AL LR +DP   + A+ G+W GY+GVL  LK R+AR  ALA SIG+++RP  +K+FGP++  V P +Y       +NW+ P  N  CK + + +AW +Q  ISTVQS + GGL  +R+ +  +   +      D +  DE+ GW +AA G Y+Q  +   LP ++  +LWPA LLE
Sbjct:   39 GSLVDRREAERLEKLTVGLSDAAPPWAAPYIKQAAPAVGLAGAIVEVMGPIVYNFYASLYRVYQTLPTNAASCLWGLALCFFGGRYPLSLAAVEAFKLAGGDSMMMHLVTLRDSAVKVQQASQEDDKHDADGDGVADVRQMGARQLFSRKMALVLRSIDPGVVSEAVGGLWSGYLGVLAALKLRYARTAALAHSIGDAVRPAASKLFGPSVLAVTPPDY-------RNWVGPAFNLACKVLGLTIAWRLQHAISTVQSGLTGGLQASRAALALMGRAS------DDTMADEVAGWALAATGIYYQF-LGGGLPAVLVPVLWPAGLLE 351          
BLAST of mRNA_P-fluviatile_contig7.13549.1 vs. uniprot
Match: A0A813D688_POLGL (Hypothetical protein (Fragment) n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813D688_POLGL)

HSP 1 Score: 248 bits (633), Expect = 2.960e-72
Identity = 139/348 (39.94%), Postives = 204/348 (58.62%), Query Frame = 1
Query:   85 PPRRRLQHQGSLHALKEERRLEEMILKVAD-KSPPWLADFLKAFAPFITLTFTVANIMGPVVIKFYTFLYKVYKILPVNVLGMIYGLVMCFFGGFFQVTIAAIEAFNMTGGEKVWLCVYDLKEDMKTLHHESKKDDERDDDRDGIPDVQQISAEKLLTRKTALALRIVDPDRATNAITGVWQGYMGVLVVLKFRFARVVALAVSIGNSLRPIVAKVFGPALSFVIPREYHQASLHSQNWIAPMINYFCKTVAMMVAWWIQRFISTVQSAIKGGLLFARSFMCFVSEVTPL-NLDPDRSFFDEILGWTVAAAGAYFQISINWDLPWIVDLLLWPAYLLETFLKWSVTWM 1122
            P R  L    S+   KE  RLE  ++ +A  + PPWL  +L+   P       VA + GP + +FY  LYK+YK LP N    ++GL  CFFGG +    AA EAF   GG+++ +C+ DL+ D+ ++    + +DE             +S EK  ++  AL +R VDP R + A++GVW GYMGV++ LK+ FAR +A A SIG++LRP+ AK+  P    V P EY Q       W+ P IN  CK VAM VAW +Q+ +S+VQS+I GGLL +R F+ ++     L + + + +  DEILGW +A+AG YFQI     +P ++  +LWP  + E++L+WSVTW+
Sbjct:   34 PTRSSLAFSTSVLDRKEAARLEHFMVSLATGQEPPWLTPYLRKLGPAFAAANQVAAVAGPFLYQFYAGLYKIYKALPQNAACGLWGLGACFFGGRYAAFFAAAEAFKTAGGDQMLVCLQDLQADLVSVLQAQEDEDEA-----------SLSGEKKASKTLALVMRTVDPGRLSMALSGVWAGYMGVVLALKYNFARTLAFAHSIGDNLRPVAAKLLAPTALSVTPPEYRQ-------WVGPAINLGCKCVAMAVAWKLQQVVSSVQSSISGGLLASRCFLPYLMSSGLLASRNLEDTMIDEILGWGLASAGMYFQIIKGGSVPLLLAPILWPMGVAESWLQWSVTWL 363          
BLAST of mRNA_P-fluviatile_contig7.13549.1 vs. uniprot
Match: A0A6T8HJ76_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8HJ76_HEMAN)

HSP 1 Score: 245 bits (626), Expect = 1.420e-71
Identity = 131/335 (39.10%), Postives = 201/335 (60.00%), Query Frame = 1
Query:  130 KEERRLEEMILKVADKS--PPWLADFLKAFAPFITLTFTVANIMGPVVIKFYTFLYKVYKILPVNVLGMIYGLVMCFFGGFFQVTIAAIEAFNMTGGEKVWLCVYDLKEDMKTLHHESKKDDERDDDRDGIPDVQQISAEK-LLTRKTALALRIVDPDRATNAITGVWQGYMGVLVVLKFRFARVVALAVSIGNSLRPIVAKVFGPALSFVIPREYHQASLHSQNWIAPMINYFCKTVAMMVAWWIQRFISTVQSAIKGGLLFARSFMCFVSEVTPLNLDPDRSFFDEILGWTVAAAGAYFQISINWDLPWIVDLLLWPAYLLETFLKWSVTWMD 1125
            +E  R+E +   +A++   PPW    L    P +T      +   PVV+        ++  LP   +  +YGLV+CFFGG + VT+AA+EAF ++GGE+V  C+ D+  D+  +   +  D+++DDD DG  DV Q+S++K LL+RK  L LR VDPDR   A+ G+ Q + GVL  LK +FAR VALAVSI ++LR     +  P L+ +IP EYH       +W++P+I+  CK V M VAW + R I+T  +++ GGL+ AR+ M   +++  + +  + S  DE  GWT+   GAYFQ+S  + LP+ ++++L P  ++E FL W+VTW D
Sbjct:   13 REAARVERICNALAEREGVPPWTKSLLVQLGPLLTTLLAFIDASTPVVMSAIAAAVAIWNTLPKQAITALYGLVLCFFGGHYTVTLAAVEAFRVSGGERVTQCIRDIWTDITNVRIANAADNKKDDDHDGKLDVDQLSSDKALLSRKIGLVLRTVDPDRVIQALGGLAQAFAGVLATLKVQFARTVALAVSISDNLRKPAGVLLTPVLAALIPPEYH-------HWVSPIISIACKVVGMWVAWLLARIIATCHASMIGGLMAARAAMGLANQMGWVKVTVEDSMLDEAAGWTLCVIGAYFQLSSGFSLPFPLNVVLLPVSMVEWFLTWAVTWFD 340          
BLAST of mRNA_P-fluviatile_contig7.13549.1 vs. uniprot
Match: A0A7S1REG4_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1REG4_ALECA)

HSP 1 Score: 243 bits (620), Expect = 7.200e-71
Identity = 127/328 (38.72%), Postives = 193/328 (58.84%), Query Frame = 1
Query:  160 LKVADKSPPWLADFLKAFAPFITLTFTVANIMGPVVIKFYTFLYKVYKILPVNVLGMIYGLVMCFFGGFFQVTIAAIEAFNMTGGEKVWLCVYDLKEDMKTLHHESKKDDERDDDRDGIPDVQQISAEKLLTRKTALALRIVDPDRATNAITGVWQGYMGVLVVLKFRFARVVALAVSIGNSLRPIVAKVFGPALSFVIPREYHQASLHSQNWIAPMINYFCKTVAMMVAWWIQRFISTVQSAIKGGLLFARSFMCFVSEVTPLNLDPDRSFFDEILGWTVAAAGAYFQISINWDLPWIVDLLLWPAYLLETFLKWSVTWMDVPVQPA 1143
            L ++ +SPPW A +L   AP I +      ++GP +++      + Y++LP  V   + GL M FFGG + V+IAA EAF   GG +V++C+ DL E  + +      D+E D D DG+ DV+Q+   +L+ RK AL ++ +DP+    A  G+W  YMGVL VLKF+FAR +ALA SI  +LRP +AKV GP L  V P +Y       + WI+P ++  CK VA  VAW +++  +TVQS   GGL+ +R+ +  + E   +++  D +  DE++GW V A G Y Q+     +P I+  L WP  +LE  L+W+V W+D   +P+
Sbjct:    2 LALSTQSPPWAAQYLAKAAPAIGVLGAGCELLGPALVRLGGAACEAYRLLPGTVARGLGGLGMSFFGGRYTVSIAAWEAFRSMGGSQVYVCLQDLGEQGRAVWVAHVADEEEDADADGVADVRQLEGGRLVARKAALVMKTIDPETVARAAGGLWTAYMGVLTVLKFQFARTIALAESIAQNLRPAMAKVLGPTLVAVTPPDY-------RKWISPAVSLLCKLVAGAVAWKVKQLAATVQSGFCGGLIASRALLELMRERRLVSVADDETLLDEVVGWCVGACGIYVQLFRGGPVPAILSPLFWPLDVLERVLQWNVAWVDAAQKPS 322          
BLAST of mRNA_P-fluviatile_contig7.13549.1 vs. uniprot
Match: A0A7S2RLK5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLK5_9STRA)

HSP 1 Score: 238 bits (606), Expect = 4.310e-68
Identity = 119/329 (36.17%), Postives = 201/329 (61.09%), Query Frame = 1
Query:  130 KEERRLEEMILKVADKSPPWLADFLKAFAPFITLTFTVANIMGPVVIKFYTFLYKVYKILPVNVLGMIYGLVMCFFGGFFQVTIAAIEAFNMTGGEKVWLCVYDLKEDMKTLHHESKKDDERDDDRDGIPDVQQISAEKLLTRKTALALRIVDPDRATNAITGVWQGYMGVLVVLKFRFARVVALAVSIGNSLRPIVAKVFGPALSFVIPREYHQASLHSQNWIAPMINYFCKTVAMMVAWWIQRFISTVQSAIKGGLLFARSFMCFVSEVTPLNLDPDRSFFDEILGWTVAAAGAYFQISINWDLPWIVDLLLWPAYLLETFLKWSVT 1116
            KE  R  ++I   ++ +PP    +LK  AP ++      ++  P+++     + K ++++P  +L  ++G ++CFFGG +  TIAA+EA+   GG + +    DL  + K + H+S +DD +D+D DGI DV QIS ++L  RK  +AL   DPD+   AI G++ G++GV+ VLK +FA+ +AL  +IG+ L     +V  P L  +IP +YH+       WI  ++ Y CK++A+ +AW++QR IS   SAI+GGLL +R  + F++    ++ +   S+ DEI+GW++AAAG YFQ  + + +P+  +LLLWP  + E ++ W+V+
Sbjct:   63 KEAERWTKLISSASESAPPAAVPYLKMMAPVLSAVLVGLHMALPLILSAAAAVDKFFQVVPAQLLVAVFGALICFFGGMYPATIAAMEAWQQAGGRRAYENARDLYIEFKRVMHKSAEDDLKDEDGDGIADVDQISGKELFMRKAHIALTTCDPDKLNGAIQGIYTGWVGVIAVLKIQFAKTIALGSAIGDFLYSPALRVATPVLVHLIPEDYHR-------WIPSLVLYVCKSIALSIAWYVQRVISAFHSAIRGGLLCSRGVLNFMNSRGIIDFNDTESYLDEIVGWSLAAAGFYFQFMMGFSMPFPFNLLLWPFGVAEWYIVWTVS 384          
BLAST of mRNA_P-fluviatile_contig7.13549.1 vs. uniprot
Match: A0A8J2ETN3_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A120 TaxID=2202890 RepID=A0A8J2ETN3_9DINO)

HSP 1 Score: 233 bits (594), Expect = 1.450e-66
Identity = 127/337 (37.69%), Postives = 202/337 (59.94%), Query Frame = 1
Query:  115 SLHALKEERRLEEMILKVADKSPPWLADFLKAFAPFITLTFTVANIMGPVVIKFYTFLYKVYKILPVNVLGMIYGLVMCFFGGFFQVTIAAIEAFNMTGGEKVWLCVYDLKEDMKTLHHESKKDDERDDDRDGIPDVQQISAEKLLTRKTALALRIVDPDRATNAITGVWQGYMGVLVVLKFRFARVVALAVSIGNSLRPIVAKVFGPALSFVIPREYHQASLHSQNWIAPMINYFCKTVAMMVAWWIQRFISTVQSAIKGGLLFARSFMCFVSEVTPL-NLDPDRSFFDEILGWTVAAAGAYFQISINWDLPWIVDLLLWPAYLLETFLKWSVTWM 1122
            SL   +E+ R+ ++ L  A   P ++ D L+   P+      V   + P ++  +T   ++Y  LPV +   +YGL +CFFGG + V I+AIEAF M+GG+K+  C  D+ E+   L   +++DD  D D DGI DV QIS  +L+ RK  L +  +DPD+ + A+ G++QG++ VL+ +KF+FA+ VALAVS+    R   A V  P L+  +P +       S++WI   I+Y  KTVA++ AW +Q+ +  VQSAI GG +FA++ + F+S+   + N+D D +  DE +GW +AA G YFQ+   + L +   L+L+P  ++E  L+W VTW+
Sbjct:   38 SLKDREEKARVAKLALAAAAHPPSYVYDVLEQALPYWNQALEVFAYIIPKIVFVWTKSTELYAALPVEIAMCLYGLALCFFGGTYVVAISAIEAFKMSGGDKISACWKDICEEYAVLRDRNQEDDVEDLDNDGIADVLQISQRELMQRKIKLVVSSIDPDKVSGAVGGLYQGFLSVLMTVKFQFAQSVALAVSMAEKARKPCAVVLTPLLATALPPD-------SEDWIVAFIDYLTKTVALLFAWTLQKMVCAVQSAIAGGHIFAQNLLYFLSKKLGVENIDLDETMVDEYIGWAIAACGIYFQLIHGFSLSFPFSLILFPLNIVEFALEWVVTWL 367          
BLAST of mRNA_P-fluviatile_contig7.13549.1 vs. uniprot
Match: A0A8J1Z0D1_9DINO (Hypothetical protein n=1 Tax=Amoebophrya sp. A25 TaxID=1410381 RepID=A0A8J1Z0D1_9DINO)

HSP 1 Score: 230 bits (586), Expect = 2.470e-65
Identity = 123/337 (36.50%), Postives = 201/337 (59.64%), Query Frame = 1
Query:  115 SLHALKEERRLEEMILKVADKSPPWLADFLKAFAPFITLTFTVANIMGPVVIKFYTFLYKVYKILPVNVLGMIYGLVMCFFGGFFQVTIAAIEAFNMTGGEKVWLCVYDLKEDMKTLHHESKKDDERDDDRDGIPDVQQISAEKLLTRKTALALRIVDPDRATNAITGVWQGYMGVLVVLKFRFARVVALAVSIGNSLRPIVAKVFGPALSFVIPREYHQASLHSQNWIAPMINYFCKTVAMMVAWWIQRFISTVQSAIKGGLLFARSFMCFVSEVTPL-NLDPDRSFFDEILGWTVAAAGAYFQISINWDLPWIVDLLLWPAYLLETFLKWSVTWM 1122
            S+   +E  R+  + L  A + P ++ D ++   P+      +  ++ P V+  Y      Y +LP+ +   IYGL +CFFGG + V I+AIEAF M+GG+ +  C  D+ E+   L  ++++D+E D D DGI DV QIS  +L+ RK  L +  +DPD+ T A+ G++QG++ VL+ +KF+FA+ +ALAVS+    R   A V  P L+  +P         S++WI   I+Y  KT+A++ AW +Q+ +  VQSAIKGG +FA++ + F++    + N+D D +  DE +GW +AA G YFQI   + L +   ++L+P  ++E  L+W+VTW+
Sbjct:   44 SMKDREERARVARLALAAAARPPGYVYDVMEKALPYWNKFLEIMAVVLPNVVWAYEKCRDFYAMLPIEIACCIYGLGICFFGGTYVVAISAIEAFKMSGGDTIEACWNDICEECSLLVEKNEEDNEEDLDNDGIADVLQISQRELMQRKVKLVVTSIDPDKLTKAVGGLYQGFLSVLMTVKFQFAQAIALAVSMAEQARKPAAVVLTPILASALPPN-------SEDWIVTAIDYLTKTIALLFAWTLQKMVCAVQSAIKGGHMFAQNLLLFLANKLGVENIDLDETMVDEYIGWAIAAMGVYFQIVHGFALVFPFSIVLFPLNIIEFSLEWTVTWL 373          
BLAST of mRNA_P-fluviatile_contig7.13549.1 vs. uniprot
Match: A0A7S3WUS9_9SPIT (Hypothetical protein n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3WUS9_9SPIT)

HSP 1 Score: 210 bits (535), Expect = 2.200e-58
Identity = 114/324 (35.19%), Postives = 184/324 (56.79%), Query Frame = 1
Query:  142 RLEEMILKVADKSPPWLADFLKAFAPFITLTFTVANIMGPVVIKFYTFLYKVYKILPVNVLGMIYGLVMCFFGGFFQVTIAAIEAFNMTGGEKVWLCVYDLKEDMKTLHHESKKDDERDDDRDGIPDVQQISAEKLLTRKTALALRIVDPDRATNAITGVWQGYMGVLVVLKFRFARVVALAVSIGNSLRPIVAKVFGPALSFVIPREYHQASLHSQNWIAPMINYFCKTVAMMVAWWIQRFISTVQSAIKGGLLFARSFMCFVSEVTPLNLDPDRSFFDEILGWTVAAAGAYFQISINWDLPWIVDLLLWPAYLLETFLKWSV 1113
            R+ ++I +++ K P  ++ ++K  AP +   +    I  P +++  T + ++   LP  ++  I G  +CFFGG F  TIAA EA+ + GG +   C   L  + K +   +  DD++D ++DG PDVQQ++ ++L+  K  +AL+ V+PD  ++ I G++ G++GVL +LK +FA+ V L   IG  L    AK F P +  ++P EY       + W+   + + CK  A+ VAWW+ R IS   SAI+GGLLF +  + ++ E   L  D      DE +GW VA AG  FQ +  + +P+  +L+LWP  LLE F+ WSV
Sbjct:   24 RVTKIIEELSTKVPAKVSPYVKQAAPVLATAWVYFMIALPYIVEGITKVQELVMQLPEKIVYAILGFCVCFFGGIFPATIAAAEAWQLCGGCEAIECCKQLYNEFKKVQDANDADDKKDANKDGKPDVQQMAPKELIVHKAQVALKAVNPDTVSDGIVGLYTGWVGVLAILKIKFAKTVTLGEKIGEQLYE-PAKKFEPMIEGMVPEEY-------RKWVPVAVRWTCKVSAITVAWWVSRVISAFHSAIRGGLLFGKYLVDYLHERGILKSDSSAQSMDEAIGWGVALAGLLFQFATGFGVPFPFNLVLWPLQLLEAFIVWSV 339          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13549.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FP22_ECTSI8.110e-20977.12Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z0S9_9STRA1.700e-10749.71Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2VT12_9DINO2.280e-7639.76Hypothetical protein (Fragment) n=1 Tax=Brandtodin... [more]
A0A813D688_POLGL2.960e-7239.94Hypothetical protein (Fragment) n=1 Tax=Polarella ... [more]
A0A6T8HJ76_HEMAN1.420e-7139.10Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S1REG4_ALECA7.200e-7138.72Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7S2RLK5_9STRA4.310e-6836.17Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8J2ETN3_9DINO1.450e-6637.69Hypothetical protein n=1 Tax=Amoebophrya sp. A120 ... [more]
A0A8J1Z0D1_9DINO2.470e-6536.50Hypothetical protein n=1 Tax=Amoebophrya sp. A25 T... [more]
A0A7S3WUS9_9SPIT2.200e-5835.19Hypothetical protein n=1 Tax=Strombidinopsis acumi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:1549965..1562734 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score564.3
Seed ortholog evalue3.7e-158
Seed eggNOG ortholog2880.D7FP22
EggNOG OGs2C1MM@1,2S2PZ@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-05_001710.1
Exons9
Model size2117
Cds size993
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817123.9336753-UTR-P-fluviatile_contig7:1549964..15509351622817123.9336753-UTR-P-fluviatile_contig7:1549964..1550935Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1549965..1550935 -
1693571221.0177395-UTR-P-fluviatile_contig7:1549964..15509351693571221.0177395-UTR-P-fluviatile_contig7:1549964..1550935Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1549965..1550935 -
1622817124.0442896-UTR-P-fluviatile_contig7:1560360..15603811622817124.0442896-UTR-P-fluviatile_contig7:1560360..1560381Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1560361..1560381 -
1693571221.1084695-UTR-P-fluviatile_contig7:1560360..15603811693571221.1084695-UTR-P-fluviatile_contig7:1560360..1560381Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1560361..1560381 -
1622817124.0553348-UTR-P-fluviatile_contig7:1562602..15627341622817124.0553348-UTR-P-fluviatile_contig7:1562602..1562734Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1562603..1562734 -
1693571221.1236262-UTR-P-fluviatile_contig7:1562602..15627341693571221.1236262-UTR-P-fluviatile_contig7:1562602..1562734Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1562603..1562734 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817123.9474835-CDS-P-fluviatile_contig7:1550935..15510551622817123.9474835-CDS-P-fluviatile_contig7:1550935..1551055Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1550936..1551055 -
1693571221.02803-CDS-P-fluviatile_contig7:1550935..15510551693571221.02803-CDS-P-fluviatile_contig7:1550935..1551055Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1550936..1551055 -
1622817123.96167-CDS-P-fluviatile_contig7:1551525..15516061622817123.96167-CDS-P-fluviatile_contig7:1551525..1551606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1551526..1551606 -
1693571221.037023-CDS-P-fluviatile_contig7:1551525..15516061693571221.037023-CDS-P-fluviatile_contig7:1551525..1551606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1551526..1551606 -
1622817123.9724247-CDS-P-fluviatile_contig7:1554557..15547071622817123.9724247-CDS-P-fluviatile_contig7:1554557..1554707Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1554558..1554707 -
1693571221.045931-CDS-P-fluviatile_contig7:1554557..15547071693571221.045931-CDS-P-fluviatile_contig7:1554557..1554707Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1554558..1554707 -
1622817123.9822185-CDS-P-fluviatile_contig7:1555420..15555881622817123.9822185-CDS-P-fluviatile_contig7:1555420..1555588Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1555421..1555588 -
1693571221.0598729-CDS-P-fluviatile_contig7:1555420..15555881693571221.0598729-CDS-P-fluviatile_contig7:1555420..1555588Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1555421..1555588 -
1622817123.9955747-CDS-P-fluviatile_contig7:1556119..15562151622817123.9955747-CDS-P-fluviatile_contig7:1556119..1556215Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1556120..1556215 -
1693571221.0695918-CDS-P-fluviatile_contig7:1556119..15562151693571221.0695918-CDS-P-fluviatile_contig7:1556119..1556215Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1556120..1556215 -
1622817124.0083039-CDS-P-fluviatile_contig7:1557440..15575781622817124.0083039-CDS-P-fluviatile_contig7:1557440..1557578Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1557441..1557578 -
1693571221.078666-CDS-P-fluviatile_contig7:1557440..15575781693571221.078666-CDS-P-fluviatile_contig7:1557440..1557578Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1557441..1557578 -
1622817124.0222254-CDS-P-fluviatile_contig7:1558886..15589851622817124.0222254-CDS-P-fluviatile_contig7:1558886..1558985Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1558887..1558985 -
1693571221.0886579-CDS-P-fluviatile_contig7:1558886..15589851693571221.0886579-CDS-P-fluviatile_contig7:1558886..1558985Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1558887..1558985 -
1622817124.0343003-CDS-P-fluviatile_contig7:1560219..15603601622817124.0343003-CDS-P-fluviatile_contig7:1560219..1560360Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1560220..1560360 -
1693571221.098644-CDS-P-fluviatile_contig7:1560219..15603601693571221.098644-CDS-P-fluviatile_contig7:1560219..1560360Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1560220..1560360 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13549.1prot_P-fluviatile_contig7.13549.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig7 1550936..1560360 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig7.13549.1

>prot_P-fluviatile_contig7.13549.1 ID=prot_P-fluviatile_contig7.13549.1|Name=mRNA_P-fluviatile_contig7.13549.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=331bp
MILKVADKSPPWLADFLKAFAPFITLTFTVANIMGPVVIKFYTFLYKVYK
ILPVNVLGMIYGLVMCFFGGFFQVTIAAIEAFNMTGGEKVWLCVYDLKED
MKTLHHESKKDDERDDDRDGIPDVQQISAEKLLTRKTALALRIVDPDRAT
NAITGVWQGYMGVLVVLKFRFARVVALAVSIGNSLRPIVAKVFGPALSFV
IPREYHQASLHSQNWIAPMINYFCKTVAMMVAWWIQRFISTVQSAIKGGL
LFARSFMCFVSEVTPLNLDPDRSFFDEILGWTVAAAGAYFQISINWDLPW
IVDLLLWPAYLLETFLKWSVTWMDVPVQPA*
back to top

mRNA from alignment at P-fluviatile_contig7:1549965..1562734-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig7.13549.1 ID=mRNA_P-fluviatile_contig7.13549.1|Name=mRNA_P-fluviatile_contig7.13549.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=12770bp|location=Sequence derived from alignment at P-fluviatile_contig7:1549965..1562734- (Porterinema fluviatile SAG_2381)
CCATTGTATAAGCTAGACGGCAATAGCAGCAGCAGCACAACCGCCGGCGC CGGGGGCCGCACCTACCCGAAGTTAACGGATCCGCCGCCACGCAGGAGGT TGCAGCATCAAGGCAGCCTCCACGCGCTGAAGGTGAGAGATAGGCAAGAG GTAAGTCGGCGATGAGTAGGTCGGCAGCGAGGTGGATGGCGAGAAAAGAG GCCCGTGCCTATACCGGTACCAGTCCAAGCTGGCGTGCTGGCTTGTTGCT TTGGCAGCCACCGGTCAAAAGCTTGTTTGGAAACCAACACGAAGATTGTT ATCCACCCCTCTGTTGGTAGCGCACAACAGCCGGCTGCCGTTTGCACGTG TGGCAAATGTCGGCGCGATTTAGATTTTTCCCGGCTCCTGAAAAGAGATG TGGGGTCGAGAACCGAACGAGAGTGAAATGGACGTCCATCGTTGCAGAGA GAGCCGGGAGGAGAAAGGCAAGAAGCGGCATGACTTTCTCCGCCCGGCCA CAGGTTCAACCAGACCGCGTGCACCTTTGTTGTTCAAGGTCCTTTCATTT TGGTCAAGAGATGGTGTGTGTACAATTCGCAAACGAAAACAAGACGGTCA TACGGCAAACAGCATGCGTTTCCTGCTCGGGGGTCAAATCAGCCGCGACC CCGCCTCCTACGTACACCATAAGCCACGGGAATTACGTGCGTGCTCGGAC CCCGGCGAATTCGCAGCCTTTATCTTCACTCACTTGGAGTGGGAGACCGC GTCAACATGATTGCGCGAAGAAAATACTAGTGATGCCTGCCCCCCCAGAT GGAAAATCATGTTGTTGCAAACCATGCCTTCATATCAATATATTTGTTCA CATACTGGTCGAACATACACTCACATGGAGGGGCGCAAGCACCACCGTAG ACGACACAAGGTAACACACCCCGGTGGTAACATTTTGGGATTTAAAAGTA AAATCACCGGGTGTGGTATCCTGTGGAGGGGGTGAAATCTTATGTAGCCC GGGTTAAAAAATGCAGGTCGCAGGTCCGATAAAACCAGAGGATGTCATAG CATGTCCGAACACCCACAGGTTGTGTTTGGGGATGTGATCATGAAGCGGG GGAGGGGGGGTCCTCTTACGTTTTGCATGCCTTAGCGGTTTGACCATTGA CCACGCGTCGTCGAGAGGACGGAGCATTGGAGAATGAGGGGGTGCGATAA GAAGCTGGTGTGATGACACTGCTTGCAGAGTTGAATCGCTGCTGCTGCAC ACTTGAAGGGTTGTGGTATTGCCAGGGTGTGATAGCAATGCCTGTACGAA CACTTGCCGCTGCCCCGCACGTGTAGGTACCTTATGTGGTACTGCGGTGG TGTAGTCCTGTCACCCTCACAAAGAAGTTGGCTGCCGTATGGGCGCCTTG CTATTGGGTACGACCAACAAAAGAGAGATCCGCAAACACACCACGACCAA GAATCGAAGACCACAAACCACAAATATTAGCGACGAAAAACGCAACAACG TTTCACTCCACGCGGGTGAGAAAATAGTCCACAATTCATTCACACTCGCT CAAAAACGACGAAGGAAGAGAAATGCACGCCAAGGAAATTGCGAGGAAAC ATGAGGAGGACACCACAAGTCCTTTTTCAACACCAGCATCGCTACTGTAC GTGCTGCTGAGATCGAGTCAGTATCTGGTTGCTGGTGAGGTGAAGCTGTT GGTGTCATGCTGGCGCCTGTTGCTGTGCCAGAGGCTGCTGCTGTTAGATC AACAGCAGAAGGAGGGACTGTAGCAGGAGCCGCTTGCGTAGATGAAGGAA GTGTGCTTGAGATTAAAGAACGAGGTGATCCGCGGCGCCTGTTCTGCTGC GGTCTAAGCAGTAGTGGAAGAAGCGGAGGTGCGTGCGGCCGCATTCTGCT CTCTCTGCAGGGGTGTTTCCCCGCACGCAGGTGTTGTATGTTGTCTGTGA TGCCCATGGGCAGATGCTATCACCCCCGGTGATAACGAAAGAGGGGCCCT GTGAATGTATGCGGTGGGATGTGTTATCTTATGTAGCCTTGGTGATAAAT CACTGATTTGTAATACCGCCCAAAATTATCACCGTGGTGTCGTATTCTGT GGGGGGTGTGGTTGTTTACGGTTGTGTGTTATGTTCTGTCGTCTACGGAA CTTCATTCAGGGGCCTAAGGGCTGAGCAATGTCGACAATTCCCTTCAACT GGGCTTAGAGTCAAGGGGCCGAATGTTTGCTGATGCTGCTGCCGCTGCTG CCTCGGTCACTGCTGCTGCTTCCGCTGCCGCTGTTTGATCGTGGTTCTTG TTTTCTAAGTCGAATGCTGCGTGTTGCCGCCGTCTCGCCGAAATCGCTCG CAGGAGGAACGTCGTCTGGAGGAGATGATCCTCAAGGTCGCCGACAAGAG CCCCCCGTGGCTCGCCGACTTCCTCAAGGCGTTCGCCCCCTTCATCACCT TGACCTTCACCGTGGCCAACATCATGGGCCCGGTGGTCATTAAATTCTAC ACCTTCCTCTACAAGGTACGGCGTAGCCCATCGTTGATACATTGAATATA TCCCGCGATCTGCATACAACCGGAGGAACAAACTGCCTAGCTGGAGATGG GTGAAGACAAGCTGCCATGTTCACCACCGTCCGACGAAGACAAGAACCAT TTGAACATTTCAGAAACTTTAAAAATATTTCAGCTGCGCGGACACGTTCA TGCACAAGTGGTGTGGTCACAAACGAGTTGTTCAGCATCCGCTCAGAAAT GATGTCGTAATTTTTGCTGCCCCAACGACTTGGTGCGCCTTTGATGCAGT CATTCGGTAATCAACCTCGAGGCCGTCCCTGCGTGGCGAGATACACGGGG CGTGTCCTGATGGCAGTATGAACAAGCAGTTTTTTTATCATTGGTGGTCT TCTTCAAAAACGCATCCCCTCCAAACTACAATGCGACCCGCCAGTAGTTC CTCCCCTCTGTAATATTATCTTGTGCAGTCTGGACCGAACCGCTGACTCG GAGAGCTGCAAGCGGCGATCCTCCTCGCTGCTTACTCAGCTCGAAGAGTT CCCGTAGAGCTCCTCCTCATGCTAATTTGCAAAAGCTGTTGCACCTTCGC GTAAGTTTTCCCTACGCCTCGCCTACCTCGATATTTTGACATTGAAAGAT TCAAATACAGTACGGAGGAAATTTGGACTTGATGATGGTGCAAGAAAAGT GTAAAGTATCAGTGAAAATCCGGCCGCCGAGGAGGGCCTTCACGTAAATG CCAGTATTTTATGAAGCGGCTTGAGGGAACAACACTGGTGAAGCGTTGAG GAACACACACACACAGAACCAGGGAGTCCGTGTTCTACCACGTCCTTTTA TGGGCGAAATCTTGTGAATGTGTGCTGACTTGTTATTGGCATTTTCTTAC TCTTCCCATCTGTTCTTGCCTGAATCCCCAAGAAGTGTCCTTCGGAGTGA AGAACTGTCTCGTAGGGCTGCTGAATCGTAGTGATGCAGTATACGCCTTT GTTGCTTTCGATTACATCTTCGTACAGCCCCACGAATCGATCGGAATGTA TCAAATGGTCCTCGTCTGCTGAAGCTTGCGTTTCGCCCTTACGTGCCTCA GTTCCTTTCCATGCCCTCCGCGTCTCAATGCCCTCGCCCCCCCCCCCCCC CCCCCCCCTCTCCCTGCCTCTTTATACTTCTCCCTGTCGCTCATTCTTAT CGTGGGTTACTACCGCTCTTTCTCCGCCCCCCTGGACATGATTACGCAGG TGTACAAGATCCTCCCCGTGAACGTGTTGGGCATGATTTATGGACTCGTA ATGTGTTTCTTCGGCGGTTTCTTCCAGGTCACCATAGCCGCCATCGAGGT GAGCCTCCCCTAACGCAGCAAAGTACGGTACTCTTCCTATTTTGTTGCAT TTATTCCGCGCGTTTAGTCGACTCTCGATGCCTCGACTCTACAGCACACA AGGGCCATAGTTGTCGCCTAGGCCAAACACCGATCGCCCCGGTGGTCTCC TGGTATCCTCGTAACGTTCTAGCAGGCAAGTTCACGGGTTCGAATCCCAA CTTGAGTGACTTGCTTTCACAAAAACGATTTTATTCTTACTTGCGTTCTT GCCGGTGGATAGTGCCTACTGCGTGTTTGTGTACACAGTGGGGAAGCGGT GGCTGAAACTCTTCTCGAATTAAAAACGGTCAGTGAGCACCGCAGTAGGA AGGTAGTGGGGGCCTCAGGGAGAGGAAACTTCTGTGCGTCCACGGTTCAG ATTTTCAGAGAAGATGCCCCGGGTTGCAAGGCGCCCTTCGAACTCTGGAA ATAACTGCGATGAAAAAAAAAAAAACGGAACTCAGTAGATTCATATACGA GCAGAGGAGGGAATAATAGTGTGATGCGATCTGATGGTAAAGCTACACGA CGCAATCCTCCTCGAAACGTCCGAACGAGCGTTAGAGTGAAACTGGCGGA ACGCTCCTGTGCGTTACGTTCGATTACGCCGTGCCACGCGCCGTTGTTGC AAACATCACCTGCCGTGGCTGATCACCTGCCGTGGCTAATGCTCCAAAAG GAAAGAGTCGCCCCTGCCACATTGTGATGCCACACACTCGAGAGCAGTTC GACGGGCTTTCGACGGGCGTGTTCTTTCGAATTTTTTAACGATGTCTCTT ATCCCTTAAGTTATCATAAAGCCTAAAGTCTGTGGACTTTGCGGATCTGG AGGGCGTGAGCTTGTCGATTTGTCAGCGGTGTATTTGTACTGTTATTTTC GCGAAAGACTGAAAGATGACCACAAACACAACCACGACGCTGCAGAGAAA CATGCAAGAGTTTTCCCGCACCCTGGTGAGCTCAGAGAACATATGAGAAG CTGCCCGGCGTTATGAAACAGAGGTGGGGAACCGAAAATCAAGTAGGGCT ACTGTAGCCTTGAAGCCAGCACCTTTGGAGCTGGCCCTTCGCATTGATCC CGCTTTTCATTTACTTGATGCCTTTGTTTTTCCTGCCCCCGACAAGGATC CTTGATCTTCCTAAAATATGGCCCCCCTCACTCCAGCCTCCTCCACTTTC CCGCCTCCACCGGACCCCCGCCGCTGTTCTACCCGCCGCCCTAACCCGAT AACGACTTCTGGCTGGCGCCCTGTCGGCCGGCCGCATCATCGTTGCATAC GTTCAGGCTTTCAACATGACCGGGGGGGAGAAGGTTTGGCTGTGCGTGTA CGACCTTAAGGAGGACATGAAGACCCTGCACCACGAAAGCAAGAAGGACG ACGAGCGGGACGACGACAGAGACGGCATCCCCGACGTGCAGCAAGTGGGT GTGCGAAGGCGCCCAGTGTGCAAGTGTGTGGTTGGGTATTTTTATGTATA CTTTTCTCCTTCATTATGAAAGTACCGACCGCGCCGCACCTGGCACACCA ATGGAATGACGTGATGCTCCGCGGCGTGCGTATGTGCATGACGTATTTTT TACTCTTGACGCTTGTCTTGCCTCAGGTTTTGGCTTCGCTGTTTCACAAT TGTGAACGATGCTGTTGCTCGTGTTCTGTATCTGGCTGGTCTTTGCCTGG TTCATCTCGGACATGCAGCTCAGGCATGCAGGCTGTGATTTCCTTCGAGT CGCGTACCAAGGTCAAAAACCACCCCCGGCCACCACGAAGGACCCTCACG TTGGAATTGGGCGGAAAACTGACAAGAGTGACGAAGGGGAAGTACAACAT TACCCCACAACCAGGGAAAGCCAGGTTTAGGCCAAAATTGAGACACGCTC GTCACACATAAGGTCGGTGCCTCCTGCGCTCGATAGGTTGAAAGACATCC GTGTTTTTTCCCACCTAGTGCGGTGTTGAGCGGTTTTGTTCTGTACGGTT TCATTATTCGGTCTCCTTAGTGATACCTCCTGTCCGCTTTCAATTGATCT ACTCTGCCTCAACATTGCGCACGAGGCAGCAGTTCGCCAAGGCTGGACGT TGTCGTGGCCCACGAAATCATTGTTGCTACTCTTATTTCTTTAATACGAA ACCTTCCCGGCCACCGCTAGTACCTTCAAATGCCCGTACCCTCAATCCAA CCGAATCGATTCCGTGGTCACAGGATTTCACACTACGAGACAAAAACTGT TGTGGCGTTCAGAATCTCGGCAGAGAGAAGATGCAGCCGGTGAGGCATCA TTAACTATTGAGACGGTCCAGCGCAAATGTACAGTTATGCAGCGAATACT GCAGGGAGAGGGAAACGGACGCCGACCGAAAACACCAGCCCGAAGGCAGC GGCTTCGACATCGCGAAGTCAGGTCCGTGCTTCTTCCTCCGTCTCCGTCA CCGTCTGCCGTGACCACAGCCCGAACATCTGAAGAACGCTCAATGATCCA TCCGTAGATTTAACTTTGAACGGCGACAGGGGCTCTTCAACACCCGACTG GCCTAACCCCATGCCATGCTGTGTTGCTTGGTACCTTCCCCCCCCCAGCT CCCTTGTTCTCACTCCCCACGCAACTCCCTCGGTTTCTCCCCTTGTGTCT TCTTTTATTACGTGTCCAGATCTCCGCTGAGAAGCTGCTGACCCGCAAGA CCGCCCTCGCTCTCCGCATTGTTGACCCGGACAGGGCCACCAACGCCATC ACCGGTGTCTGGCAGGTCATGTACAGAAAGATCCGGTGACGACTTGCCGT ACTGTTTGGTCACAAAAACTATACCTAGTTAATGATTTAATTGATGATTA TTAAGTTTCATTATTAGTTGGGTGGATTCGCATATGGTTGCTCAAACTTG TTGCACGTTTGCGGCGCCACCGGATGTTGGAGCGCCTTGATTGGCTGAGA CACGGCTTGGGTTTGAAGTGTGCGCCGCCGCTGCTGCGCAATCGAAGTGT CATTGCCCTCTCTGCCTCCTCCACAACTTTTGGCCCGTTTGGTCCGCGTT TTGTTTTGTTCCTTTCCGAGCTGTTCCAGCCGTCTTGGCGAGTCATACGC GAAAATGGTTTGATGCCCCACTCTCCAAAAGACTAAAAACAAAGGTTGAA CGGGTGTTGAGATGGACAACGAGCTTGCATGGCCAGAAGGAAGATGAAAG CGCTCCGATAGATTCTCTTGTTGCAAGCGACCAAAAATCACAGAATGTAG CATTCATTTTTGTTCTCCCCGAATCCGACTCCACGAACACCACCAGGGCT ACATGGGAGTGCTGGTCGTTCTCAAGTTCCGCTTCGCAAGGGTGGTTGCC TTGGCGGTGTCGATTGGGAACAGCCTCCGGCCCATCGTGGCCAAGGTCTT CGGCCCAGCGCTTTCGTTCGTGATCCCCAGGGAGTACCACCAGGCGAGCT TGCATTCACAAAACGTGTAGATTTTCCGAGGCGCACACAAAACATTGTTT GGCGGAGAGGGCAGAGGAGAGGGCAGAGAGAGAGAGAAAAAAAAAAAATC GGTTGGCAGAGACACAAGCCAGTGAGGCGCAGGAAGTTGACCCTGTGAAT TTCGCGTGTGTCTACCCTCGGGTCGTCTCCCTTTCTCGTCACTGGAGGCA AAAAAGTGCAGTGGGAATGTCTTCCGCCCTGGCGTTCCCTATTCCTGGGA GTGAACACCGCAAGGCAAGCTTACACTCTGCTACTATTTTTGACCATCCC CATTGTTCGCCGTTTTCGGGATTTTTGCGTCCCGTCGCAATTCCATGGGC CCGACGTCCGGATTTCGTTGCAAGTGACTATCTTCTTTGTTCGAGTTCCG GCTTTATTGCCTGTGGCGTGCAACCGTGGATGAGAGATCCCCCCCCGCGG CAGAAACGTTTTTCTTTGCGAGCCCTGCTTCCGCAGAGCAAGGAAAACTG GCGAAGTATGTCGCGCACCGAGTGACTTAAGTAGCTTACGCTGCAGTCAG CTGTACTCTTCATCTGCTTTCTGTCTTTATGATCCTGGCTCGTCCGCCGA CGTTTCTGCTAACCCCTCCCTTCGCCCCTCCTTCCACCCCCAACGCACAC CTTGAATCCACTCCTGCCCTCCCACGCTCGTGGTTGTTGGCCCATTCTGG TTGGCTTTTCTCGTCCCTTTACGACAGTGGATAGCTCCGATGATCAACTA CTTCTGCAAAACCGTGGCCATGATGGTGGCCTGGTGGATCCAGCGCTTCA TCTCCACGGTGCAGAGCGCCATCAAGGGGGGGCTGCTGTTTGCGAGGTCC TTCATGTGCTTCGTCAGCGAAGTGACGGTAGGGACTTGATTTCTATGCTG CTGTCGCTGTCGCTGTCGCAGTCGCTGTCGTTGTTCTGGGTGTTTCTCGT GTTCGATGACAACAATGATGGTGGTCGTCGTTGCTTGCGCTCATTGCCTT CGTGTGCCTTTCATCGTCAGCGTCCCACTCCCGCCCTCTATCTTGTTATG TCTGCCACCTTACCGCGACATTGTTCTTCATGCCCCTTCTGGGCAGCTCT CGAGATCCACAGAACTAATCATCGCTGGACTTCAGGCTGACTCCGTGTCG AACCTGTAGACGACCTTTGTTGAATGCATCAGCGCCGTGATATCTGAACT ATGGCTGACTGGCTGTGAGCTTCATTTGCATTCGCAACACAAATGATTCC TTGTATCATGGTTCGATCCTGCACGGCACAGGCATGGGCGTACACTGTCT CGCACGTTTTTGACTTCACATCTCTCGCACGTTTTGTGTTCTACCTTAAA GCAACCATGTGACACGCCCTGCGTCGGAGAATGTTCTGGAAAACCCCAGT TTGCAGCTGATGACCAATTCTCCTTATCGATTAATGGTCGTGCATGTGCT ATCCAAACACAGCCACGAGATGGTTGCCCCACAGTGTCGTTTGGAGAACA TGTACGGTTGATTTCTGAGGTGAACCGTTGTCAACAAGTCTTCAAATCGA ATGTTCGTGGGAGAGCAAAGTGACTCGTTGTCGATTTCCTAGGGTATTTC ATGATGCAATACTATGCTATGTGCTGTGCAGTATATAATCTCTGTGCCAT AAGTAGAGGTCCTGATGATTGCACGAACCCTTAATGGTGTCCTATGCCGT AGGCGACATTTTTTTTTGGAGTCTTTGGTGTTTTTCGACTTGAAGTCCTT TATTTATTTATTTTTGCAAGCACCCGCCTGTTTGTATCAACGGCCGGAAA GAATTCAGTCGGCTCTCAAATGGCCGTGTTCGCCCTTTTGGCTTGTACCC CGCAGGCGATTCTTTTTCCGATTTGAATTCATAACTTTGAGTCTACACAT TTTTGGTGAAAATCCTCCGTCCCCGAAAAACGGCAGTGAATCGCCTTCGA AACATAAGCCTACCCATTGATCGTCCGCTTCTTGTCACATTTTCGCCGAA CTTTCGGCCCGTCGCTGATTTGTTAATAAATCGCCGGAAACAAGCACAGA GGTTGGTTGAGGATGGTGGAGTTGCAGTTAAGCTCATCGCATTTGGAATC GTCCACGATATCATCAAAGCTCGAATCGCGACCCCGTGCGGTTAAGCTTG TCGAGATTCGCATCTCTTGGATGCGCGGGTGGCCGATCTGCTTTCAAACA ATAATGAGTTGCAGTTCGAGGATTGTGCATTCGTAAATGGAATACCCCCC GCGCGCCACAGTTGTGTGAATATATGTTCCAAATCGGTTCCCGGAGCGTT ATCGTCAAAGTACGCTGAACGTGCTGCGGAAACTAGTGTGTAACCCCCTC ACACAAATTTTATTGGCGTGGGTTGTCGGAATACAGAACTTACGGTACTC TTCCGAGTCCGACGACTGCCTGAAACTGAGGCTCGATACCAAATAATTAG AATATACTCCGGAGTATATAATTGCCGAGATGCATCGTCAGGAGATCGCA ACTGCCACCACAATTTGGCGTTTGATGATGTCTTGCACCACCCTACGTGC GATGACCTGCAAACCTAAAGTCACGGTTCTGAGCCAACCTCTGCGCTTGT CTCCCACGATTTGTTCAATTTCAGTGATGGACGGAAAGGGCGACGAAAAG ATGAGAAGAGGCGGACGATGTATAGGGTACCATTGAGAGTACGTGCTGCG CGGACGAAAAAGCAAACCATCTCAAAGCGAAATGAAATGGTGGTTTCGTC AAACGCAACGGCTTTCAAGCGAAGCCGTCGAGAGTTTTGTAGTGACGCAT CGTTTTATGTCAGGCAACCCCTCTCTGTTGAGATATCGAGCTCCGAAAAT CGACTCAAGGGTTGCGACCTACGATAGACGTGCAGAAATCATGTCTCAAA TCTCGAACCAAACATCTGCGCATCTTTTCGATCTGGTACCAGGATCAGCA GGATTGGCATTTTTTGACACAGATTCTGCCGGGCCCAATAATGATGCGCT GCAAATAGTCGGAAGACCTCGACAGATGTACAAAGATTTTCAGGAGAACA TTGAATCATGTCCCACTCTTTTCTGTACGCAACTACAACATTCGTGTTCT GGTAACACTGGTTGGTGCGCCATGCCTTGATGGGCTGTTACAGAATACAT GCGATGTTTTGTACTAAAGGCACAGCCAGCACATGCCAAACTTCTAGATG TATTAATTCATGACTGGTTAACATGAACATTTTATTCTCGTATCGTTTGC CTACCGAAGATTCATCGAACGGCACAGCGACAGAAATCAACATTAATTCA TTCGCGTTTGTATCCCCGGGATAATAGACCGGTTACCAATACGCCGAAGG GGAATATGGTATGCTTTAGAAATGTGCGGTGCGGAAGCGGTATTTATGGC CAACACTCGCGCACGCAGGTGCAGCAGGTTTGCAACAATGTATTGGAGTT GGGCGTAAGTTGTTGCTTCATGTTGTGTAGCAGTCCAGAGTTCCACGAGT TGCAAACTGAACATGAAAATCCGAGTATTTGTGCGCACCCCGTTTGAACC GGAGGGCGTGACCTGACCAACACCGGGTCAAGAGTATCAAGAGTATCGAT TCCCTGCGAATTCATGCGGTACCAAGCACATTCGTCCGCCATCATGTGGA CGAGATTGTGACCCACTCTGGTGACAATGAAAAATATCGCCTGGATGTCA GGCGGCATGCGGACCCATCTCCACCTGGCTGCCGGAAACCTGGCCGCGAA CTAAAGCGCCCCCCCTCCATTGTCTGTCATTCCTTCCCTTTCCGCCGCCA CGCGAAATGTGTCGAAAAACACCGCCAGCCCCTGAATCTGGACCCGGACC GATCATTCTTCGACGAGATTCTGGGCTGGACCGTCGCCGCCGCGGGTGCC TACTTCCAGGTGATTACACCTCAACATGGCCGGATCGACGCGACTTGCGA TGGGACTTAAAATTTCCACAGCGTATTCCGATCACCGAGGGGCGATATTG GCGTCACCTCAAGGCATCCGTTCAGTTACCCACAAGGGTCCTCAGCTGCC GCTGTGCCCCTGCACAACTACGAATCATCCTCACTCCTAGCCAGCCACAG GGGCACGCACACGGGAATACCAGAACCCGCCGGGGCTCTTGTCGTGTCCT GTAGCCCGCGGCGTCCGCGTCAGCCACTAGCGTTTTCCATGGGCCAACAT TCTTCTTGGCTGCAAGAAGCCCTGCCTTCACCTCGTTTGTTCGCTTCCTC GAACGGAAATACAGAACATTTGGTGGCCGCACGGGGTGGGCGCCGCAACG CATCGTGTGCGACCCGTGCGTCTTCTGCGTACCCCCCTCCTGACCCGCGT TGTCTTTCGGCACACACATGATCGTACAGATAAGCATCAACTGGGATCTA CCGTGGATCGTCGATCTGCTGTTGTGGCCTGCCTACCTTCTGGAGACCTT CCTCAAGTGGAGCGTCACGTGGATGGACGTACCGGTGCAGCCCGCTTGAT GAGACTAATTCTCCACTACCATTTGCTGCAAGGTGCCGCCGTGCCAGCTG CTCTCTAGAGGACTTTGAGGTGGAGAAAAAATCGCCTCTCCGGGGTGTCT TGAGGGTATTGGCATGATGTGCCGGGTTTGTTGTGTTGATGGGCGTTGTA GTCCAAATGGTGAGTGTTTTGGCAACTTACACGCGTGTGTTGAGAATATC CGCACCCTCTCTACTGTCCTATCTCCCTATTTTTCGGGAGTTGGCGATCT GTCTGATGCGCACCAGGTTCCCTCTGGCAAAGCTGTGCTGGTGGTTGCCT TTCTGAAGCGCCGGAGTCGTTTTTTGCGTTTGCGCTTCAGCTACTCCGTT TAACGATCGTTGTAGTATTGCCCGTGTTGGCTTTGCTCATTCATACTTTG ATGCCAAGCCGAGCTGGCTTCGGGGGATGACAGCATCACGTTGACGTTTC CTCTTTGTCTTGGACGAAATCAACTGGGCGTGCTGTTGGAAGAATGCGCA ATGGCGAAATTTTTGGCGACAGCTTGGCTACAACATTGATGCATCCTAGG CTTCAGCGGCTTTCGGCTTTCCTGGGGAACATCCCGGGTTCGGCGGGATC TAGGCACCTCCCTGTTGAATCGTCAGTGACACGCTCGACACGTAGTGCGT CGAAATGTGGTCAACAGGGGGCTAGCTGCGGGGTGAGATCAGGAGTACCC CTCGTTTCACAGCGCAGGTTGGCCTCGAGACTGTCATCGGATCATGATGG TTCGTTTAGTTACCGACATGTGGGTGAACAGATGGTTCAAGTTGCCTGGC GCCTGGAAGTTTCGAATAAGCGTAGCGAGCACGATACCGAGCTTGCGCGA AAAGCTGGAAAACGTGAAGTCATGCGGACAGGAACAATCACCCAATGTTG TCGAGCGGAAGACTGGCCGCCCAGGCTTGTAAATGTTTAGAAACCGAGTG GTCTGCAAATTTCAACGGAC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig7:1549965..1562734-

>mRNA_P-fluviatile_contig7.13549.1 ID=mRNA_P-fluviatile_contig7.13549.1|Name=mRNA_P-fluviatile_contig7.13549.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1986bp|location=Sequence derived from alignment at P-fluviatile_contig7:1549965..1562734- (Porterinema fluviatile SAG_2381)
ATGATCCTCAAGGTCGCCGACAAGAGCCCCCCGTGGCTCGCCGACTTCCT
CAAGGCGTTCGCCCCCTTCATCACCTTGACCTTCACCGTGGCCAACATCA
TGGGCCCGGTGGTCATTAAATTCTACACCTTCCTCTACAAGATGATCCTC
AAGGTCGCCGACAAGAGCCCCCCGTGGCTCGCCGACTTCCTCAAGGCGTT
CGCCCCCTTCATCACCTTGACCTTCACCGTGGCCAACATCATGGGCCCGG
TGGTCATTAAATTCTACACCTTCCTCTACAAGGTGTACAAGATCCTCCCC
GTGAACGTGTTGGGCATGATTTATGGACTCGTAATGTGTTTCTTCGGCGG
TTTCTTCCAGGTCACCATAGCCGCCATCGAGGTGTACAAGATCCTCCCCG
TGAACGTGTTGGGCATGATTTATGGACTCGTAATGTGTTTCTTCGGCGGT
TTCTTCCAGGTCACCATAGCCGCCATCGAGGCTTTCAACATGACCGGGGG
GGAGAAGGTTTGGCTGTGCGTGTACGACCTTAAGGAGGACATGAAGACCC
TGCACCACGAAAGCAAGAAGGACGACGAGCGGGACGACGACAGAGACGGC
ATCCCCGACGTGCAGCAAGCTTTCAACATGACCGGGGGGGAGAAGGTTTG
GCTGTGCGTGTACGACCTTAAGGAGGACATGAAGACCCTGCACCACGAAA
GCAAGAAGGACGACGAGCGGGACGACGACAGAGACGGCATCCCCGACGTG
CAGCAAATCTCCGCTGAGAAGCTGCTGACCCGCAAGACCGCCCTCGCTCT
CCGCATTGTTGACCCGGACAGGGCCACCAACGCCATCACCGGTGTCTGGC
AGATCTCCGCTGAGAAGCTGCTGACCCGCAAGACCGCCCTCGCTCTCCGC
ATTGTTGACCCGGACAGGGCCACCAACGCCATCACCGGTGTCTGGCAGGG
CTACATGGGAGTGCTGGTCGTTCTCAAGTTCCGCTTCGCAAGGGTGGTTG
CCTTGGCGGTGTCGATTGGGAACAGCCTCCGGCCCATCGTGGCCAAGGTC
TTCGGCCCAGCGCTTTCGTTCGTGATCCCCAGGGAGTACCACCAGGCGAG
CTTGCATTCACAAAACGGCTACATGGGAGTGCTGGTCGTTCTCAAGTTCC
GCTTCGCAAGGGTGGTTGCCTTGGCGGTGTCGATTGGGAACAGCCTCCGG
CCCATCGTGGCCAAGGTCTTCGGCCCAGCGCTTTCGTTCGTGATCCCCAG
GGAGTACCACCAGGCGAGCTTGCATTCACAAAACTGGATAGCTCCGATGA
TCAACTACTTCTGCAAAACCGTGGCCATGATGGTGGCCTGGTGGATCCAG
CGCTTCATCTCCACGGTGCAGAGCGCCATCAAGGGGGGGCTGCTGTTTGC
GAGGTCCTTCATGTGCTTCGTCAGCGAAGTGACGTGGATAGCTCCGATGA
TCAACTACTTCTGCAAAACCGTGGCCATGATGGTGGCCTGGTGGATCCAG
CGCTTCATCTCCACGGTGCAGAGCGCCATCAAGGGGGGGCTGCTGTTTGC
GAGGTCCTTCATGTGCTTCGTCAGCGAAGTGACGCCCCTGAATCTGGACC
CGGACCGATCATTCTTCGACGAGATTCTGGGCTGGACCGTCGCCGCCGCG
GGTGCCTACTTCCAGCCCCTGAATCTGGACCCGGACCGATCATTCTTCGA
CGAGATTCTGGGCTGGACCGTCGCCGCCGCGGGTGCCTACTTCCAGATAA
GCATCAACTGGGATCTACCGTGGATCGTCGATCTGCTGTTGTGGCCTGCC
TACCTTCTGGAGACCTTCCTCAAGTGGAGCGTCACGTGGATGGACGTACC
GGTGCAGCCCGCTTGAATAAGCATCAACTGGGATCTACCGTGGATCGTCG
ATCTGCTGTTGTGGCCTGCCTACCTTCTGGAGACCTTCCTCAAGTGGAGC
GTCACGTGGATGGACGTACCGGTGCAGCCCGCTTGA
back to top