mRNA_P-fluviatile_contig7.13539.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig7.13539.1 vs. uniprot
Match: D8LD73_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD73_ECTSI) HSP 1 Score: 558 bits (1437), Expect = 1.620e-186 Identity = 355/711 (49.93%), Postives = 412/711 (57.95%), Query Frame = 1
Query: 1 RVDDTSLEAARELIMREASGSRRVTKTALLESIGYGVMDPLIYRTFESSPLPPKLRPTIHVRVAEGVHCFVQEFLGVPLEAGVSMLSQLATP-----TTAAFSNHRATAATAAGSSQYFELHPKIPGIGMRMTVVRLGNGELLVHSPVAPTVELLDMLRDSFPAIGPTCKVHLFSASMSPEHWVFLKHWKEIFPSAEVWAVPGPHRRLMGVQVNHDIEQIDGLPERLGREVEVAVLEGVPMVREALLLHRPTGTVLSAALLLAMD------QDRKSYPKGWR---TRSRNKPAPAFRNVCLQQS---RRFGDHSNSLLTPAETAVPNLADATKSDRWRRLRWGLVDKTAALLDMDTLAVFTPVKTLMRAFKGNSAEFSSRVLSWNARVFVGCHGQSPLEGPELTAMLHTALGRYAGPLNKKKAEKRGVGTRLLALVPGRRHGGQSAHGPPPEEEVSSLVPEPRGGRGPGVVSSRADIHLSPAPRGESGGVSNDAGGSGSGSGSFTSAAQTMWVQELDTTKLRRAVSRPAAPTLPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGISNMSETESRARRYIQEKA--------------ESSRGA-GRPLPGKAPPTPSRTTGGG----------------GAASAEAGRFPNRDPSVTAGAGG-GSGNPYVVGPDARYDETPAGSMDSEEDDPFEAPFYPFTTDGPQVNG 1986
++D T L+ A ELI E SGSRRVTK ALLESIGYGVMDPL Y+TFE+SPLPPKLRPT HVR+A+G+H F QEFLGVP E GVS S+ A T A S+ T +A G SQ FEL PK+PG+GMRMT++RLG+GELL HSPVAPTVELLDMLRD FPA+GPT KVHLFSAS+SPEHW FLKHWK IFP+AEVWAVPGPHRRL+GV+V+HDIEQI G+PERLG EVEVAVLEGVPMVREALLLHRPTGTVLSA LLLAMD QD + +G R T S +P + S +RFG+HS SL ET+ P+ RWRRLRWG++DKTA+LLDM+TLAVF PVKTL+ AFKGNS FSSRVLSW+ +V V CHGQSPLEGPEL MLH ALGR + AE PGR +A P E+ ++ P G PG + +GGVS W + L TT G M E E+RARRY+++K ES + A GR G+ P PS TG G AA+ RD GAG G NP+VVG D RYDE P G + +DDPFEAPFYPF DGP +NG
Sbjct: 50 QMDATPLKEALELIAMETSGSRRVTKKALLESIGYGVMDPLAYQTFENSPLPPKLRPTTHVRIADGIHTFGQEFLGVPPEEGVSSFSEYAVAGSSASETTAHSSGDGTDPSAVGGSQQFELQPKLPGLGMRMTMLRLGSGELLAHSPVAPTVELLDMLRDCFPAVGPTTKVHLFSASVSPEHWAFLKHWKAIFPAAEVWAVPGPHRRLVGVEVDHDIEQISGVPERLGGEVEVAVLEGVPMVREALLLHRPTGTVLSADLLLAMDPSAIAAQDAAAGGEGQRPEPTSSATAFSPPGESPTTSSSLRPKRFGEHSGSL-AEVETS-PDSEKKGGGSRWRRLRWGILDKTASLLDMNTLAVFAPVKTLLHAFKGNSGAFSSRVLSWDTKVLVACHGQSPLEGPELKGMLHAALGR-------QPAE------------PGRSSPAVTAAVAEPPEQQAANAPSAGGAGMPGKDKA-------------AGGVS-------------------PWSRRLPTTSGANGADN--------------------------VLGGLRVSAGEGGGETMLEAEARARRYVRDKLAGDGAGAAEFVAPPESPKAARGRAFGGERKPAPSARTGEGLGPGQTTPPAKVERQQPAAAXXXXXGDVRDKGEAGGAGAEGGDNPFVVGADTRYDEGPVGPIGEADDDPFEAPFYPFDADGPPLNG 681
BLAST of mRNA_P-fluviatile_contig7.13539.1 vs. uniprot
Match: A0A6H5KD46_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD46_9PHAE) HSP 1 Score: 359 bits (921), Expect = 3.260e-114 Identity = 200/325 (61.54%), Postives = 223/325 (68.62%), Query Frame = 1
Query: 4 VDDTSLEAARELIMREASGSRRVTKTALLESIGYGVMDPLIYRTFESSPLPPKLRPTIHVRVAEGVHCFVQEFLGVPLEAGVSMLSQLA-----TPTTAAFSN-HRATAATAAGSSQYFELHPKIPGIGMRMTVVRLGNGELLVHSPVAPTVELLDMLRDSFPAIGPTCKVHLFSASMSPEHWVFLKHWKEIFPSAEVWAVPGPHRRLMGV---------------------------------------------------QVNHDIEQIDGLPERLGREVEVAVLEGVPMVREALLLHRPTGTVLSAALLLAMDQDRKSYPKG 807
+D T L+ A +LI E SGSRRVTK ALLESIGYGVMDPL Y+TFE+SPLPPKLRPT HVR+A+G+H F QEFLGVP E GVS ++ A T TAA S+ A A G SQ F+L PK+PG+GMRMT++RL +GELL HSPVAPTVELLDMLRD FPA+GPT KVHLFSAS+SPEHW FLKHWK IFP+AEVWAVPGPHRRLMGV QV+HDIEQI G+PERLG EVEVAVLEGVPMVREALLLHRPTGTVLSA LLLAMDQ + G
Sbjct: 1 MDATPLKEALDLIAMETSGSRRVTKKALLESIGYGVMDPLAYQTFENSPLPPKLRPTTHVRIADGIHTFGQEFLGVPPEEGVSSYAEYAVVGPPTSETAAHSSGDDGNAHAAVGGSQMFKLQPKLPGLGMRMTMLRLRSGELLAHSPVAPTVELLDMLRDCFPAVGPTTKVHLFSASVSPEHWAFLKHWKAIFPAAEVWAVPGPHRRLMGVEASMGLCGVSARSMKKTTAVATRKLLFPFYYNVSQHLIHPARVVGALFCEAQVDHDIEQICGVPERLGGEVEVAVLEGVPMVREALLLHRPTGTVLSADLLLAMDQSAIAVSSG 325
BLAST of mRNA_P-fluviatile_contig7.13539.1 vs. uniprot
Match: A0A430DRY7_9SPHN (DUF4336 domain-containing protein n=4 Tax=Sphingomonas TaxID=13687 RepID=A0A430DRY7_9SPHN) HSP 1 Score: 84.0 bits (206), Expect = 6.200e-14 Identity = 53/136 (38.97%), Postives = 73/136 (53.68%), Query Frame = 1
Query: 373 MRMTVVRLGNGELLVHSPVAPTVELLDMLRDSFPAIGPTCKVHLFSASMSPEHWVFLKHWKEIFPSAEVWAVPGPHRRLM----GVQVNHDIEQIDGLPERLGREVEVAVLEGVPMVREALLLHRPTGTVLSAALL 768
+RMTVVRLGNGEL +HSP+ T L L AIGP HL + +++ HW FLK W+E +P A W VPG R GV+++ D++ D E E+E ++ G REA H + T+L L+
Sbjct: 88 VRMTVVRLGNGELWLHSPIRYTPALAKALE----AIGPIR--HLVAPNIA--HWTFLKAWQEAYPDATTWGVPGLRDRRQVRNSGVRIDCDLQ--DAAEEPWAAELEQGIVPGAAGFREAYFFHEASRTLLLVDLI 213
BLAST of mRNA_P-fluviatile_contig7.13539.1 vs. uniprot
Match: A0A845BI63_9PROT (DUF4336 domain-containing protein n=2 Tax=Roseomonas coralli TaxID=2545983 RepID=A0A845BI63_9PROT) HSP 1 Score: 80.5 bits (197), Expect = 8.790e-13 Identity = 61/189 (32.28%), Postives = 88/189 (46.56%), Query Frame = 1
Query: 373 MRMTVVRLGNGELLVHSPVAPTVELLDMLRDSFPAIGPTCKVHLFSASMSPEHWVFLKHWKEIFPSAEVWAVPGPHRRLM----GVQVNHDIEQIDGLPERLGREVEVAVLEGVPMVREALLLHRPTGTVLSAALLLAMDQDRKSYPKGWRTRSR--------NKPAPAFRNVCLQQSRRFGDHSNSLL 903
+RMTV+RL +G LLVHSP D L+ +GP +HL + S++ HW FL+ W+ PSA WA PG R GV+++H++ D P G V +EG E L H PT T++ L + ++ + P R R + P P R V Q+ R+ D + LL
Sbjct: 88 VRMTVIRLPDGSLLVHSPT----RFSDPLKQKLEELGPI--LHLVAPSLA--HWRFLEEWQHACPSAITWAAPGLGERAAVRRSGVRLDHELR--DAPPLTWGDAVRPVTVEGAMGFHEVALFHTPTRTLVLTDLAMRLEPPK--VPALLRPLIRMFGTMAPDSMPPPYLRAVVKQRRRQAADAARRLL 264
BLAST of mRNA_P-fluviatile_contig7.13539.1 vs. uniprot
Match: UPI001E57D75D (DUF4336 domain-containing protein n=1 Tax=Sphingomonas sp. PL-96 TaxID=2887201 RepID=UPI001E57D75D) HSP 1 Score: 80.1 bits (196), Expect = 1.130e-12 Identity = 53/146 (36.30%), Postives = 77/146 (52.74%), Query Frame = 1
Query: 352 PKIPG---IGMRMTVVRLGNGELLVHSPVAPTVELLDMLRDSFPAIGPTCKVHLFSASMSPEHWVFLKHWKEIFPSAEVWAVPGPHRRLM----GVQVNHDIEQIDGLPERLGREVEVAVLEGVPMVREALLLHRPTGTVLSAALL 768
P PG + +RMTVVRL NG+LL+HSP+ T L L AIGP HL + +++ HW F+K W+ I+P A W VPG R GV+++ D++ D E+E ++ G EA H+P+ T+L L+
Sbjct: 74 PIAPGGLTLPVRMTVVRLANGDLLLHSPIRYTPALARELE----AIGPIR--HLIAPNIA--HWTFVKSWQAIYPEATTWGVPGLRDRRQVRTSGVRIDRDLQ--DAPEAAWADELEQGLVPGAAGFCEAYFFHKPSRTLLLVDLI 209
BLAST of mRNA_P-fluviatile_contig7.13539.1 vs. uniprot
Match: UPI000ADD5C71 (DUF4336 domain-containing protein n=2 Tax=Roseomonas TaxID=125216 RepID=UPI000ADD5C71) HSP 1 Score: 80.9 bits (198), Expect = 1.670e-12 Identity = 49/149 (32.89%), Postives = 77/149 (51.68%), Query Frame = 1
Query: 367 IGMRMTVVRLGNGELLVHSPVAPTVELLDMLRDSFPAIGPTCKVHLFSASMSPEHWVFLKHWKEIFPSAEVWAVPGPHRR----LMGVQVNHDIEQIDGLPERLGREVEVAVLEGVPMVREALLLHRPTGTVLSAALLLAMDQDRKSYP 801
+G RMTV+RL +G LL+HSP +++L L AIGP HL + S HW F+K W + P A WA PG R G++++HD+ + P G +++ + GV E + HRPT T++ L++ ++ + P
Sbjct: 168 LGTRMTVIRLLDGGLLLHSPTRFSLKLKGELE----AIGPVR--HLVAPSFG--HWTFMKDWSDACPEATTWATPGLRTRGQVRRSGLRLDHDLAET--APSEWGDAIQLVPVPGVAGFTETAMFHRPTETLVLTDLVINLESPKVPLP 306
BLAST of mRNA_P-fluviatile_contig7.13539.1 vs. uniprot
Match: X6G0H4_9HYPH (Uncharacterized protein n=24 Tax=Mesorhizobium TaxID=68287 RepID=X6G0H4_9HYPH) HSP 1 Score: 78.2 bits (191), Expect = 2.350e-12 Identity = 47/148 (31.76%), Postives = 80/148 (54.05%), Query Frame = 1
Query: 367 IGMRMTVVRLGNGELLVHSPVAPTVELLDMLRDSFPAIGPTCKVHLFSASMSPEHWVFLKHWKEIFPSAEVWAVPG-PHR---RLMGVQVNHDIEQIDGLPERLGREVEVAVLEGVPMVREALLLHRPTGTVLSAALLLAMDQDRKSY 798
+ +RMTV++LGNG LL+HSP EL + L IGP +HL + + + HW F+K W++ A WAVPG HR R GV+++HD+ P+ ++++ V+ G E H+ + T++ L+L ++ ++ +
Sbjct: 36 VPVRMTVIQLGNGGLLLHSPTRFAFELREQLEQ----IGPI--LHLVAPNSA--HWTFVKEWQDHVQGAPTWAVPGLRHRAKVRRAGVRIDHDLAA--AAPDAWSKDLDQVVVPGAGRFTEVAFYHKNSRTMVLTDLVLNLEPEKLPF 173
BLAST of mRNA_P-fluviatile_contig7.13539.1 vs. uniprot
Match: A0A839YC54_9SPHN (Uncharacterized protein n=1 Tax=Sphingomonas sp. BK580 TaxID=2586972 RepID=A0A839YC54_9SPHN) HSP 1 Score: 78.6 bits (192), Expect = 2.860e-12 Identity = 49/141 (34.75%), Postives = 74/141 (52.48%), Query Frame = 1
Query: 373 MRMTVVRLGNGELLVHSPVAPTVELLDMLRDSFPAIGPTCKVHLFSASMSPEHWVFLKHWKEIFPSAEVWAVPGPHRRLMGVQVNHDIEQI--DGLPERLGREVEVAVLEGVPMVREALLLHRPTGTVLSAALLLAMDQDR 789
+RMTV+RL +G LL+HSP++ T L L A+GP HL + +++ HW +L W+ FP A +WA PG R + I+ + D P G V+ V+EG RE LHR T T++ L+ ++ +R
Sbjct: 71 VRMTVIRLDDGALLLHSPISYTPALAAALE----ALGPVR--HLVAPNVA--HWTYLPRWQRAFPRATLWAAPGLAERAQVRRAGLRIDSVLGDEAPSAWGGAVDQGVIEGGAGFRETWFLHRATRTLVLTDLVQNLEPER 203
BLAST of mRNA_P-fluviatile_contig7.13539.1 vs. uniprot
Match: A0A347UD87_9RHOB (DUF4336 domain-containing protein n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A347UD87_9RHOB) HSP 1 Score: 77.4 bits (189), Expect = 4.080e-12 Identity = 45/145 (31.03%), Postives = 78/145 (53.79%), Query Frame = 1
Query: 376 RMTVVRLGNGELLVHSPVAPTVELLDMLRDSFPAIGPTCKVHLFSASMSPEHWVFLKHWKEIFPSAEVWAVPGPHRRL----MGVQVNHDIEQIDGLPERLGREVEVAVLEGVPMVREALLLHRPTGTVLSAALLLAMDQDRKSY 798
RMTVVRL NG++ +HSP ++ D LRD A+GP C HL + + H+ ++ W++ FP A +A PG +R M ++ + D+ Q P ++E ++EG + REA+ H+ + T++ L+ + D+ +
Sbjct: 36 RMTVVRLKNGDIWLHSPT----KICDSLRDEVTALGPVC--HLIAPNWI--HYAYIAEWQKAFPKARAYAAPGVVKRARKHGMALRFDEDLTQTP--PTAWAGQIEQMIVEGSKIHREAVFFHKHSKTLILTDLIENFEPDKLGW 170
BLAST of mRNA_P-fluviatile_contig7.13539.1 vs. uniprot
Match: A0A502GA59_9PROT (DUF4336 domain-containing protein n=2 Tax=Roseomonas nepalensis TaxID=1854500 RepID=A0A502GA59_9PROT) HSP 1 Score: 78.6 bits (192), Expect = 4.270e-12 Identity = 48/149 (32.21%), Postives = 78/149 (52.35%), Query Frame = 1
Query: 367 IGMRMTVVRLGNGELLVHSPVAPTVELLDMLRDSFPAIGPTCKVHLFSASMSPEHWVFLKHWKEIFPSAEVWAVPGPHRR----LMGVQVNHDIEQIDGLPERLGREVEVAVLEGVPMVREALLLHRPTGTVLSAALLLAMDQDRKSYP 801
IG RMTV+RL +G LL+HSP ++ L L AIGP HL + +++ HW F+K W++ P A WA PG R G++++HD+ + P G +E+ + G E + HRP+ T++ L++ ++ + P
Sbjct: 93 IGTRMTVIRLPDGGLLLHSPTRFSIALKTALE----AIGPVR--HLVAPNLA--HWTFMKDWQDACPEATTWAAPGLRGRGQVRRSGLRLDHDLGPL--APAAWGEAIELVPVPGGAGFTEMAMFHRPSETLVLTDLVINLEAPKVPLP 231 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13539.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig7.13539.1 >prot_P-fluviatile_contig7.13539.1 ID=prot_P-fluviatile_contig7.13539.1|Name=mRNA_P-fluviatile_contig7.13539.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=653bp MREASGSRRVTKTALLESIGYGVMDPLIYRTFESSPLPPKLRPTIHVRVAback to top mRNA from alignment at P-fluviatile_contig7:1350630..1357606+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig7.13539.1 ID=mRNA_P-fluviatile_contig7.13539.1|Name=mRNA_P-fluviatile_contig7.13539.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6977bp|location=Sequence derived from alignment at P-fluviatile_contig7:1350630..1357606+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig7:1350630..1357606+ >mRNA_P-fluviatile_contig7.13539.1 ID=mRNA_P-fluviatile_contig7.13539.1|Name=mRNA_P-fluviatile_contig7.13539.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3918bp|location=Sequence derived from alignment at P-fluviatile_contig7:1350630..1357606+ (Porterinema fluviatile SAG_2381)back to top |