mRNA_P-fluviatile_contig7.13535.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig7.13535.1
Unique NamemRNA_P-fluviatile_contig7.13535.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13535.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:1317842..1320974 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons2
Model size2527
Cds size1389
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13535.1prot_P-fluviatile_contig7.13535.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig7 1318091..1320085 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817108.9621654-UTR-P-fluviatile_contig7:1317841..13180901622817108.9621654-UTR-P-fluviatile_contig7:1317841..1318090Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1317842..1318090 +
1693571153.8843663-UTR-P-fluviatile_contig7:1317841..13180901693571153.8843663-UTR-P-fluviatile_contig7:1317841..1318090Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1317842..1318090 +
1622817109.0039427-UTR-P-fluviatile_contig7:1320085..13209741622817109.0039427-UTR-P-fluviatile_contig7:1320085..1320974Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1320086..1320974 +
1693571153.9105074-UTR-P-fluviatile_contig7:1320085..13209741693571153.9105074-UTR-P-fluviatile_contig7:1320085..1320974Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1320086..1320974 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817108.9754105-CDS-P-fluviatile_contig7:1318090..13188741622817108.9754105-CDS-P-fluviatile_contig7:1318090..1318874Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1318091..1318874 +
1693571153.8936484-CDS-P-fluviatile_contig7:1318090..13188741693571153.8936484-CDS-P-fluviatile_contig7:1318090..1318874Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1318091..1318874 +
1622817108.9899404-CDS-P-fluviatile_contig7:1319480..13200851622817108.9899404-CDS-P-fluviatile_contig7:1319480..1320085Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1319481..1320085 +
1693571153.901499-CDS-P-fluviatile_contig7:1319480..13200851693571153.901499-CDS-P-fluviatile_contig7:1319480..1320085Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1319481..1320085 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig7.13535.1

>prot_P-fluviatile_contig7.13535.1 ID=prot_P-fluviatile_contig7.13535.1|Name=mRNA_P-fluviatile_contig7.13535.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=463bp
MESTGENNSKRPKRSTQTPARLRDVGEPGAACGHGAIRTTENPLPPAVGV
VPPPSGMSREVVAPGCTQRPIQLPGLRDDQSLSSSAPGPTLEPNPAPSSP
FEDADGSSGDDFSLTPGAFIAEARQRREELRAAPSSGIEDDDNEHGRNVP
ERARAPQRVLRSCMRPRRRPPPRRPRRSRTRRPLMSHSRQASRRRRGDSR
TLDGARIFFGRRVSIAGFPTCRKGDKNLLVQVLTRRDQERQWLVPGQPAY
LADLDQILISAGRSTSNAGKASAPSDGGPPRGLVNAVRASHVHLSPVEMG
REFQYNNQAYSREEILAAIAEEDGVSAASAAGGGGPSAGWVTGGRSSPIS
SDSGSSSGGVSDGRSSDGGTSRGASPGGNGRRCMVIEGGKTKTKHCVPRV
VGILSIADMKGMLLTSRLPLDRKGLDEGKSGARGDLWLALADRYKNPNLV
VSVWIDDESIVI*
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mRNA from alignment at P-fluviatile_contig7:1317842..1320974+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig7.13535.1 ID=mRNA_P-fluviatile_contig7.13535.1|Name=mRNA_P-fluviatile_contig7.13535.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3133bp|location=Sequence derived from alignment at P-fluviatile_contig7:1317842..1320974+ (Porterinema fluviatile SAG_2381)
AGGCGGCGCACATACAAGACGCGTTCCTCATGTTCCGCGAGTTCCGCGGA
ACATGCGGGACGGATTCTGACAAAACATCCAAGTAGGCGTGTGCACTTCA
GGGACTAGGGACCCACACATCCAGGAAATTTTTCCCCCCGTTTAAAACGG
CCCTTTAACGCGCCAAATTTCAATTTTGCCTGGCTTTCTTGACTTTCCGA
GTCGCAAACGCTCCAAAGACCGTACATCACTCAAACCCAAGCACAAAGCA
TGGAGAGCACCGGTGAGAACAACAGTAAGAGGCCTAAGAGGAGCACCCAA
ACCCCTGCGAGACTGCGGGATGTCGGTGAGCCCGGGGCTGCTTGTGGTCA
CGGAGCTATTCGTACCACCGAGAACCCCCTGCCTCCAGCCGTAGGGGTGG
TCCCGCCGCCATCTGGCATGTCCCGCGAGGTGGTCGCACCAGGCTGTACC
CAGCGACCTATTCAGCTTCCAGGCTTAAGGGATGATCAGTCTCTTTCATC
CTCTGCTCCGGGGCCAACTCTAGAGCCCAATCCCGCGCCATCCTCTCCTT
TCGAAGACGCTGATGGTTCATCCGGCGACGACTTCAGCCTCACGCCTGGC
GCGTTCATCGCCGAAGCACGTCAGAGGAGGGAGGAGCTGCGTGCCGCGCC
GTCGTCAGGTATCGAAGACGACGACAATGAGCACGGAAGAAACGTTCCGG
AAAGGGCAAGGGCCCCGCAGCGCGTGCTCCGGTCGTGCATGCGGCCGCGG
CGGAGGCCTCCGCCGCGGCGTCCAAGAAGATCAAGAACAAGAAGACCGCT
CATGTCGCACTCCAGGCAAGCATCGAGAAGGCGAAGAGGGGACTCGCGTA
CACTGGATGGAGCAAGGATCTTCTTCGGAAGGCGTGTTTCCATCGCGGGA
TTCCCAACATGTCGAAAAGGGGACAAGAACCTGCTGGTTCAGGTGCTGAC
GCGGCGGGACCAGGAGAGGCAGTGGCTCGTTCCAGGGCAACCTGCATACC
TGGCCGATCTGGACCAAATCCTCATCAGCGCAGGTGTGTCCCGCCGATTT
TACCTTCAGTTTGAAATTGAATTTTCTGCACACGTGCACTATACATTTAC
CCGCTTGAGACTTACGTACCGTTAAGAACATGCCGTTCGGTGCCACCGTA
AAAAATATCCAGGTAGGTACAATAGTGTTGACTGCCGTTCAGCCGAATTT
GACGTGCTTGCGGCCCATGCGCGTCACCCGGGCGGTTGCTTTAGTTCTTG
ATCTAGTTCTGTGGAAGCATGGTTGAAAAGTGCCTGTCCTCGAAGCGACA
TATCCGAAAAAAAAAACGCAAAGTTTTGTACCCCCACCCCCCCTTCCCTT
ACAAGCCATTGAAAAAAACACAGTGGACAAGTCTCGCTCTTCAAGCGAAT
ACCATGTGGGTAGCATGTCGTGACAATATTTGGCGCCTCGATGTGCTTTT
TACCCATTTGTGACAGAGCTACGCTTGGGAAGGTTGCCAACTTTTTTTTA
TGGGGTGCCGTTTCGGTGTTAGTAGCGTCACCCCCCGCGCCGCCTCCTCA
CCTTGACTGCCAAGCATCACGCCGGACTGCTGACGACTTTCTTTCTCTAC
GTGGTCGTTCATCCTGTTACACCGCTACAATGTGATCAGGTCGGAGCACC
TCGAACGCGGGCAAAGCTTCAGCTCCCTCTGACGGTGGACCTCCTCGTGG
ATTGGTCAACGCGGTCCGCGCTTCGCACGTTCATCTATCGCCGGTAGAGA
TGGGGCGGGAGTTCCAGTACAACAACCAGGCGTACTCGAGGGAAGAAATC
CTGGCCGCAATCGCTGAGGAGGACGGCGTCAGCGCGGCTTCTGCCGCCGG
GGGTGGCGGCCCTTCGGCTGGTTGGGTCACTGGCGGCCGTTCCTCGCCGA
TCTCTTCGGACAGCGGCTCTTCTTCTGGTGGGGTCAGTGACGGGCGGTCT
TCGGATGGTGGTACTAGCAGAGGAGCCTCGCCTGGAGGCAACGGGCGGCG
CTGCATGGTGATCGAGGGTGGCAAAACGAAGACGAAGCACTGTGTCCCCC
GGGTGGTCGGTATCCTGAGCATCGCCGACATGAAGGGCATGCTTCTCACC
AGCCGCTTGCCCTTGGACAGGAAGGGACTGGACGAGGGGAAGTCAGGGGC
TCGCGGTGATCTGTGGTTGGCGTTGGCTGACCGGTACAAGAACCCCAACC
TCGTGGTGAGTGTCTGGATAGATGATGAATCGATCGTCATTTGAATATAT
ACTTTCCTTGAGGCCGCGCAAGGGCATGTCATACTTTTGCCATTTTTGCG
TGATTGGAGGTGCTCCGTGGGTAGGAGGACGGGGCGCTTGCCGGCAACGG
AACTATGTTGCATTTTTTTTCTTTAAGTCAGAGGACGGGAGGTACGTGCT
TGGACTCTACCCTGCTATGAGGTACAGTCGTCCCCGCTTTCAAGTCGCTC
GGATTTAGTCAACTACCCGCGTCAGCTAAATAGTAATTTTTCAAAAGCAC
GGTGGCGCTGTTGTATTTCGCGGCCCCCCTTCATACACAAGTGAATGACT
CTGTTCATAGAGCAAGGCAGGCACCGGGGGGGGTATGCTGCAGCACCTGC
CGGCTACAGATACAGTATGAGAAGGTTCCTACCATCTTCTGGTGCGCCAT
CGGCATCCGGTACCAAGCAATGTAGTGTACCGTGGGCCAAAAACAAATCA
AGAAAAACACGACTTGAACTGAGTGTCTTGGCTCTACCGCCGCCTTGTTG
TCTTCGCCCTTTCGTACTACCACTCGCCTCGCCCAGACGCATCGTTTGAC
GTACAGTATGTCTTCACTTATCCCGGGGATGATGGGCTACCGTCCCCTGA
AATCTTGAAGACGCTTCCCCGAGTTAAAGACGCTTTTGAACAAAGGAACC
ACATCCGTGTTTGAAGCCGGGACGACTGTACCGAGATCATGCACGTGTTT
ACGTCACGTCTCCTCTCCGTCACTGCTTTCCATTAGACGAAATGACGGAC
TCCAAAGATATATCTTGCCTTCATCCCCCCCCCCGGCATATCAATCCCCG
CGCCGCTCTCCACCACCGTCTTGGTCTGTTAGCGATGATGGATAAGGACT
CCCTCATCTCATCGCTCGCTACCCGGGAGGCCG
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Coding sequence (CDS) from alignment at P-fluviatile_contig7:1317842..1320974+

>mRNA_P-fluviatile_contig7.13535.1 ID=mRNA_P-fluviatile_contig7.13535.1|Name=mRNA_P-fluviatile_contig7.13535.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2778bp|location=Sequence derived from alignment at P-fluviatile_contig7:1317842..1320974+ (Porterinema fluviatile SAG_2381)
ATGGAGAGCACCGGTGAGAACAACAGTAAGAGGCCTAAGAGGAGCACCCA
AACCCCTGCGAGACTGCGGGATGTCGGTGAGCCCGGGGCTGCTTGTGGTC
ACGGAGCTATTCGTACCACCGAGAACCCCCTGCCTCCAGCCGTAGGGGTG
GTCCCGCCGCCATCTGGCATGTCCCGCGAGGTGGTCGCACCAGGCTGTAC
CCAGCGACCTATTCAGCTTCCAGGCTTAAGGGATGATCAGTCTCTTTCAT
CCTCTGCTCCGGGGCCAACTCTAGAGCCCAATCCCGCGCCATCCTCTCCT
TTCGAAGACGCTGATGGTTCATCCGGCGACGACTTCAGCCTCACGCCTGG
CGCGTTCATCGCCGAAGCACGTCAGAGGAGGGAGGAGCTGCGTGCCGCGC
CGTCGTCAGGTATCGAAGACGACGACAATGAGCACGGAAGAAACGTTCCG
GAAAGGGCAAGGGCCCCGCAGCGCGTGCTCCGGTCGTGCATGCGGCCGCG
GCGGAGGCCTCCGCCGCGGCGTCCAAGAAGATCAAGAACAAGAAGACCGC
TCATGTCGCACTCCAGGCAAGCATCGAGAAGGCGAAGAGGGGACTCGCGT
ACACTGGATGGAGCAAGGATCTTCTTCGGAAGGCGTGTTTCCATCGCGGG
ATTCCCAACATGTCGAAAAGGGGACAAGAACCTGCTGGTTCAGGTGCTGA
CGCGGCGGGACCAGGAGAGGCAGTGGCTCGTTCCAGGGCAACCTGCATAC
CTGGCCGATCTGGACCAAATCCTCATCAGCGCAGATGGAGAGCACCGGTG
AGAACAACAGTAAGAGGCCTAAGAGGAGCACCCAAACCCCTGCGAGACTG
CGGGATGTCGGTGAGCCCGGGGCTGCTTGTGGTCACGGAGCTATTCGTAC
CACCGAGAACCCCCTGCCTCCAGCCGTAGGGGTGGTCCCGCCGCCATCTG
GCATGTCCCGCGAGGTGGTCGCACCAGGCTGTACCCAGCGACCTATTCAG
CTTCCAGGCTTAAGGGATGATCAGTCTCTTTCATCCTCTGCTCCGGGGCC
AACTCTAGAGCCCAATCCCGCGCCATCCTCTCCTTTCGAAGACGCTGATG
GTTCATCCGGCGACGACTTCAGCCTCACGCCTGGCGCGTTCATCGCCGAA
GCACGTCAGAGGAGGGAGGAGCTGCGTGCCGCGCCGTCGTCAGGTATCGA
AGACGACGACAATGAGCACGGAAGAAACGTTCCGGAAAGGGCAAGGGCCC
CGCAGCGCGTGCTCCGGTCGTGCATGCGGCCGCGGCGGAGGCCTCCGCCG
CGGCGTCCAAGAAGATCAAGAACAAGAAGACCGCTCATGTCGCACTCCAG
GCAAGCATCGAGAAGGCGAAGAGGGGACTCGCGTACACTGGATGGAGCAA
GGATCTTCTTCGGAAGGCGTGTTTCCATCGCGGGATTCCCAACATGTCGA
AAAGGGGACAAGAACCTGCTGGTTCAGGTGCTGACGCGGCGGGACCAGGA
GAGGCAGTGGCTCGTTCCAGGGCAACCTGCATACCTGGCCGATCTGGACC
AAATCCTCATCAGCGCAGGTCGGAGCACCTCGAACGCGGGCAAAGCTTCA
GCTCCCTCTGACGGTGGACCTCCTCGTGGATTGGTCAACGCGGTCCGCGC
TTCGCACGTTCATCTATCGCCGGTAGAGATGGGGCGGGAGTTCCAGTACA
ACAACCAGGCGTACTCGAGGGAAGAAATCCTGGCCGCAATCGCTGAGGAG
GACGGCGTCAGCGCGGCTTCTGCCGCCGGGGGTGGCGGCCCTTCGGCTGG
TTGGGTCACTGGCGGCCGTTCCTCGCCGATCTCTTCGGACAGCGGCTCTT
CTTCTGGTGGGGTCAGTGACGGGCGGTCTTCGGATGGTGGTACTAGCAGA
GGAGCCTCGCCTGGAGGCAACGGGCGGCGCTGCATGGTGATCGAGGGTGG
CAAAACGAAGACGAAGCACTGTGTCCCCCGGGTGGTCGGTATCCTGAGCA
TCGCCGACATGAAGGGCATGCTTCTCACCAGCCGCTTGCCCTTGGACAGG
AAGGGACTGGACGAGGGGAAGTCAGGGGCTCGCGGTGATCTGTGGTTGGC
GTTGGCTGACCGGTACAAGAACCCCAACCTCGTGGTGAGTGTCTGGATAG
ATGATGAATCGATCGTCATTTGAGTCGGAGCACCTCGAACGCGGGCAAAG
CTTCAGCTCCCTCTGACGGTGGACCTCCTCGTGGATTGGTCAACGCGGTC
CGCGCTTCGCACGTTCATCTATCGCCGGTAGAGATGGGGCGGGAGTTCCA
GTACAACAACCAGGCGTACTCGAGGGAAGAAATCCTGGCCGCAATCGCTG
AGGAGGACGGCGTCAGCGCGGCTTCTGCCGCCGGGGGTGGCGGCCCTTCG
GCTGGTTGGGTCACTGGCGGCCGTTCCTCGCCGATCTCTTCGGACAGCGG
CTCTTCTTCTGGTGGGGTCAGTGACGGGCGGTCTTCGGATGGTGGTACTA
GCAGAGGAGCCTCGCCTGGAGGCAACGGGCGGCGCTGCATGGTGATCGAG
GGTGGCAAAACGAAGACGAAGCACTGTGTCCCCCGGGTGGTCGGTATCCT
GAGCATCGCCGACATGAAGGGCATGCTTCTCACCAGCCGCTTGCCCTTGG
ACAGGAAGGGACTGGACGAGGGGAAGTCAGGGGCTCGCGGTGATCTGTGG
TTGGCGTTGGCTGACCGGTACAAGAACCCCAACCTCGTGGTGAGTGTCTG
GATAGATGATGAATCGATCGTCATTTGA
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