mRNA_P-fluviatile_contig7.13517.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig7.13517.1 vs. uniprot
Match: A0A6H5KJS7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJS7_9PHAE) HSP 1 Score: 172 bits (436), Expect = 2.930e-50 Identity = 78/133 (58.65%), Postives = 100/133 (75.19%), Query Frame = 1
Query: 1 AEQTPDLYRGAVEAAAAALGERFSSHTRAPAPLSDSGSLAEKRAAAQQHAGLCGQHHANFIAGVDFNEVQERVVGGHVRTKNLRNQACFDAAIGLNAKGRGVQLKRKECFTQACRAIWPGDQPLPEAIVTALS 399
A QTP+ +R A++AAA A+G R+ +H P PL D G L E++AA QQHAGLCG++HA IA +D V+ER G + TK +RNQAC+DA LNA+GRGVQL+R+ECFTQACRA+WP DQPLP A++ ALS
Sbjct: 65 AAQTPERFREAMQAAAVAVGARYCNHDTPPGPLPDIGKLPERQAAVQQHAGLCGKYHAEHIANIDVTMVEERAAGAEITTKRMRNQACYDAGTALNARGRGVQLRRQECFTQACRAVWPDDQPLPVAVLAALS 197
BLAST of mRNA_P-fluviatile_contig7.13517.1 vs. uniprot
Match: A0A6H5KGD0_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGD0_9PHAE) HSP 1 Score: 165 bits (418), Expect = 2.160e-47 Identity = 85/166 (51.20%), Postives = 109/166 (65.66%), Query Frame = 1
Query: 1 AEQTPDLYRGAVEAAAAALGERFSSHTRAPAPLSDSGSLAEKRAAAQQHAGLCGQHHANFIAGVDFNEVQERVVGGHVRTKNLRNQACFDAAIGLNAKGRGVQLKRKECFTQACRAIWPGDQPLPEAIVTALSQQSCISARCC-RFRLQQGWL*EGHGRGISVLIR 495
A QTP+ +R A++AAA A+G R+ +H P PL D L E++AA QQHAGLCG++HA IA +D V+ER G + TK +RNQAC+DA LNA+GRGVQL+R+ECFTQAC A+WP DQPLP A L+ CI R C R R + G +SVLI+
Sbjct: 35 AAQTPERFREALQAAAVAVGARYCNHDTPPGPLPDISKLPERQAAVQQHAGLCGKYHAEHIANIDVTRVEERAAGAEITTKRMRNQACYDAGTALNARGRGVQLRRQECFTQACCAVWPDDQPLPAA---KLAIVRCIVWRTCHRLRTR------GRVAMLSVLIK 191
BLAST of mRNA_P-fluviatile_contig7.13517.1 vs. uniprot
Match: A0A6H5JXC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXC7_9PHAE) HSP 1 Score: 164 bits (415), Expect = 2.380e-47 Identity = 74/133 (55.64%), Postives = 98/133 (73.68%), Query Frame = 1
Query: 1 AEQTPDLYRGAVEAAAAALGERFSSHTRAPAPLSDSGSLAEKRAAAQQHAGLCGQHHANFIAGVDFNEVQERVVGGHVRTKNLRNQACFDAAIGLNAKGRGVQLKRKECFTQACRAIWPGDQPLPEAIVTALS 399
A QTP+ +R A++AAA A+G R+ +H P PL D L E++AAAQQHAGLCG++HA IA +D V+ R G + TK +RN+AC+DA LNA+GRGVQL+R++CFT ACRA+WP DQPLP A++ ALS
Sbjct: 46 AAQTPERFREALQAAAVAVGARYCNHDTPPGPLPDISKLPERQAAAQQHAGLCGKYHAEHIANIDVTMVETRAAGAEITTKRMRNKACYDAGTALNARGRGVQLRRQKCFTHACRAVWPDDQPLPAAVLDALS 178
BLAST of mRNA_P-fluviatile_contig7.13517.1 vs. uniprot
Match: A0A6H5K3W2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3W2_9PHAE) HSP 1 Score: 149 bits (377), Expect = 2.640e-40 Identity = 68/121 (56.20%), Postives = 87/121 (71.90%), Query Frame = 1
Query: 1 AEQTPDLYRGAVEAAAAALGERFSSHTRAPAPLSDSGSLAEKRAAAQQHAGLCGQHHANFIAGVDFNEVQERVVGGHVRTKNLRNQACFDAAIGLNAKGRGVQLKRKECFTQACRAIWPGD 363
A QTP+ +R A++AAA A+G R+ +H P PL D L E +AAAQQHAG CG++H IA +D V+ER G + TK +RNQAC+DA LNA+GRGVQL+R+ECFTQACRA+WP D
Sbjct: 169 AAQTPEGFREALQAAAVAVGARYCNHDTPPGPLPDISKLPEMQAAAQQHAGSCGKYHGEHIANIDVTMVKERAAGAEITTKRMRNQACYDAGTALNARGRGVQLRRQECFTQACRAVWPDD 289
BLAST of mRNA_P-fluviatile_contig7.13517.1 vs. uniprot
Match: A0A6H5JXX9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXX9_9PHAE) HSP 1 Score: 110 bits (274), Expect = 3.410e-26 Identity = 54/127 (42.52%), Postives = 73/127 (57.48%), Query Frame = 1
Query: 4 EQTPDLYRGAVEAAAAALGERFSSHTRAPAPLSDSGSLAEKRAAAQQHAGLCGQHHANFIAGVDFNEVQERVVGGHVRTKNLRNQACFDAAIGLNAKGRGVQLKRKECFTQACRAIWPGDQPLPEAI 384
E T L R AA +G + H AP P+ A K+AAA+ H GLCG HHA+ IA V +V R G RNQAC+D + +N +G+GVQLKR +CFT ACRA+WPG++ + ++
Sbjct: 35 EGTSTLLRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAE-HPGLCGVHHAHIIAAVRTEDVTSR--SGFTAANKFRNQACYDGGMAMNTRGKGVQLKRADCFTHACRAVWPGNEEMEASV 158
BLAST of mRNA_P-fluviatile_contig7.13517.1 vs. uniprot
Match: A0A6H5KUP8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUP8_9PHAE) HSP 1 Score: 107 bits (267), Expect = 1.950e-25 Identity = 55/123 (44.72%), Postives = 72/123 (58.54%), Query Frame = 1
Query: 4 EQTPDLYRGAVEAAAAALGERFSSHTRAPAPLSDSGSLAEKRAAAQQHAGLCGQHHANFIAGVDFNEVQERVVGGHVRTKNLRNQACFDAAIGLNAKGRGVQLKRKECFTQACRAIWPGDQPL 372
E T L R AA +G + H AP P+ A K+AAA+ H GLCG +HA+ IA V +V R G RNQAC+D A+ +NA+G+GVQLKR ECFT A RA+WPG++ +
Sbjct: 33 EDTSTLVRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAE-HPGLCGVYHAHIIAAVRTEDVTSR--SGSTAANKFRNQACYDGAMAMNARGKGVQLKRAECFTHARRAVWPGNEEM 152
BLAST of mRNA_P-fluviatile_contig7.13517.1 vs. uniprot
Match: A0A6H5K6B0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6B0_9PHAE) HSP 1 Score: 104 bits (260), Expect = 1.180e-23 Identity = 54/123 (43.90%), Postives = 71/123 (57.72%), Query Frame = 1
Query: 4 EQTPDLYRGAVEAAAAALGERFSSHTRAPAPLSDSGSLAEKRAAAQQHAGLCGQHHANFIAGVDFNEVQERVVGGHVRTKNLRNQACFDAAIGLNAKGRGVQLKRKECFTQACRAIWPGDQPL 372
E T L R AA +G + H AP P+ A K+AAA+ H GLCG +HA+ IA V +V + G RNQAC+D A+ +NA G+GVQLKR ECFT A RA+WPG++ +
Sbjct: 102 EDTSTLVRAFAFEVAAKVGAEYCHHDTAPEPMPSMALAAAKKAAAE-HPGLCGVYHAHIIAAVRTEDVTSQ--SGSTAANKFRNQACYDGAMAMNAHGKGVQLKRAECFTHARRAVWPGNEEM 221
BLAST of mRNA_P-fluviatile_contig7.13517.1 vs. uniprot
Match: A0A6H5JH50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH50_9PHAE) HSP 1 Score: 104 bits (259), Expect = 2.210e-23 Identity = 57/140 (40.71%), Postives = 81/140 (57.86%), Query Frame = 1
Query: 4 EQTPDLYRGAVEAAAAALGERFSSHTRAPAPLSDSGSLAEKRAAAQQHAGLCGQHHANFIAGVDFNEVQERVVGGHVRTKNLRNQACFDAAIGLNAKGRGVQLKRKECFTQACRAIWPGDQPLPEAIVTALSQQSCISAR 423
E+ D+ R A+ +G R+ SH AP PL D S A+++ AA H GLCG +HA+ IA V +V E+ RNQAC++ A +NA+G GVQL R ECFT+ACRA+ PG + +V A +++ +AR
Sbjct: 104 EENTDVGRAFAFEVASKVGARYCSHVSAPEPLEDM-SHAKRKKAAADHPGLCGVYHAHIIAAVRTQDVAEK--WNQTTGNKYRNQACYNGAEAVNARGAGVQLPRAECFTRACRALLPGSGEMDPLVVEAFHRKNQGAAR 240
BLAST of mRNA_P-fluviatile_contig7.13517.1 vs. uniprot
Match: A0A6H5JAI4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAI4_9PHAE) HSP 1 Score: 100 bits (248), Expect = 2.900e-23 Identity = 48/104 (46.15%), Postives = 66/104 (63.46%), Query Frame = 1
Query: 115 LAEKRAAAQQHAGLCGQHHANFIAGVDFNEVQERVVGGHVRTKNLRNQACFDAAIGLNAKGRGVQLKRKECFTQACRAIWPGDQPLPEAIVTALSQQSCISARC 426
LA + AA +H GLCG +HA+ IA V +V R G RNQAC+D A+ +NA+G+GVQLKR ECFT A RA+WPG++ + ++V A + S + A C
Sbjct: 6 LAAAKKAAAEHPGLCGVYHAHIIAAVRTEDVTSR--SGSTAANKFRNQACYDGAMAMNARGKGVQLKRAECFTHAGRAVWPGNEEMEASVVEA--RTSWMKAGC 105
BLAST of mRNA_P-fluviatile_contig7.13517.1 vs. uniprot
Match: A0A6H5JI26_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI26_9PHAE) HSP 1 Score: 97.8 bits (242), Expect = 7.380e-23 Identity = 40/65 (61.54%), Postives = 51/65 (78.46%), Query Frame = 1
Query: 205 VQERVVGGHVRTKNLRNQACFDAAIGLNAKGRGVQLKRKECFTQACRAIWPGDQPLPEAIVTALS 399
V+ER G + TK + NQAC+DA + LNA+GRGVQL+ +EC TQACRA+WP DQPLP A++ ALS
Sbjct: 2 VEERAAGAEITTKRMMNQACYDAGMALNARGRGVQLRSQECSTQACRAVWPDDQPLPAAVLAALS 66 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13517.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig7.13517.1 >prot_P-fluviatile_contig7.13517.1 ID=prot_P-fluviatile_contig7.13517.1|Name=mRNA_P-fluviatile_contig7.13517.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=153bp AEQTPDLYRGAVEAAAAALGERFSSHTRAPAPLSDSGSLAEKRAAAQQHAback to top mRNA from alignment at P-fluviatile_contig7:1122081..1123537- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig7.13517.1 ID=mRNA_P-fluviatile_contig7.13517.1|Name=mRNA_P-fluviatile_contig7.13517.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1457bp|location=Sequence derived from alignment at P-fluviatile_contig7:1122081..1123537- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig7:1122081..1123537- >mRNA_P-fluviatile_contig7.13517.1 ID=mRNA_P-fluviatile_contig7.13517.1|Name=mRNA_P-fluviatile_contig7.13517.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=918bp|location=Sequence derived from alignment at P-fluviatile_contig7:1122081..1123537- (Porterinema fluviatile SAG_2381)back to top |