mRNA_P-fluviatile_contig7.13509.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig7.13509.1
Unique NamemRNA_P-fluviatile_contig7.13509.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig7contigP-fluviatile_contig7:1035957..1039396 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons5
Model size564
Cds size321
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig7.13509.1prot_P-fluviatile_contig7.13509.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig7 1035957..1039155 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817108.6072497-CDS-P-fluviatile_contig7:1035956..10359821622817108.6072497-CDS-P-fluviatile_contig7:1035956..1035982Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1035957..1035982 +
1693571152.645382-CDS-P-fluviatile_contig7:1035956..10359821693571152.645382-CDS-P-fluviatile_contig7:1035956..1035982Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1035957..1035982 +
1622817108.6185527-CDS-P-fluviatile_contig7:1036669..10367351622817108.6185527-CDS-P-fluviatile_contig7:1036669..1036735Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1036670..1036735 +
1693571152.6546574-CDS-P-fluviatile_contig7:1036669..10367351693571152.6546574-CDS-P-fluviatile_contig7:1036669..1036735Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1036670..1036735 +
1622817108.6280935-CDS-P-fluviatile_contig7:1037291..10373701622817108.6280935-CDS-P-fluviatile_contig7:1037291..1037370Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1037292..1037370 +
1693571152.9301794-CDS-P-fluviatile_contig7:1037291..10373701693571152.9301794-CDS-P-fluviatile_contig7:1037291..1037370Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1037292..1037370 +
1622817108.6374357-CDS-P-fluviatile_contig7:1038509..10386291622817108.6374357-CDS-P-fluviatile_contig7:1038509..1038629Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1038510..1038629 +
1693571152.9406087-CDS-P-fluviatile_contig7:1038509..10386291693571152.9406087-CDS-P-fluviatile_contig7:1038509..1038629Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1038510..1038629 +
1622817108.6467464-CDS-P-fluviatile_contig7:1039125..10391551622817108.6467464-CDS-P-fluviatile_contig7:1039125..1039155Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1039126..1039155 +
1693571152.9496963-CDS-P-fluviatile_contig7:1039125..10391551693571152.9496963-CDS-P-fluviatile_contig7:1039125..1039155Porterinema fluviatile SAG_2381CDSP-fluviatile_contig7 1039126..1039155 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817108.6567528-UTR-P-fluviatile_contig7:1039155..10393961622817108.6567528-UTR-P-fluviatile_contig7:1039155..1039396Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1039156..1039396 +
1693571152.958641-UTR-P-fluviatile_contig7:1039155..10393961693571152.958641-UTR-P-fluviatile_contig7:1039155..1039396Porterinema fluviatile SAG_2381UTRP-fluviatile_contig7 1039156..1039396 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig7.13509.1

>prot_P-fluviatile_contig7.13509.1 ID=prot_P-fluviatile_contig7.13509.1|Name=mRNA_P-fluviatile_contig7.13509.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=107bp
ASTRTSSSSTFLGNFLSSAGKKSRKSLARDTFGSSDGSTSPQRDSDDRRQ
STLTEDKDDDTLAASSQTSAVARLIAKAEGRSAANRSNRALGGPKGSSKW
AVAGAH*
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mRNA from alignment at P-fluviatile_contig7:1035957..1039396+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig7.13509.1 ID=mRNA_P-fluviatile_contig7.13509.1|Name=mRNA_P-fluviatile_contig7.13509.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3440bp|location=Sequence derived from alignment at P-fluviatile_contig7:1035957..1039396+ (Porterinema fluviatile SAG_2381)
GCCTCCACCCGGACTTCGAGCTCAAGGTGCGGTTTACTTTTTGGAACCAG
CGCTATGAGACGGTCACCGCAGGCGGCTCAGAATGCTGTTGACCTCCAGA
TTCGAGGTCAAAGGAATCGACGATTGTTCCGTGAATTTTGGCAGATCAAG
AAATTCAGGATTCACAAAGTGTAGACGATTACCGCGCCATGTGCAATTTA
TTGGTAAAACATCAAATGTTTTGCTTGAATGGGAAGCAACCACAACACAT
TTTTGGTGCATGCGGTGACATCAGTCGTGGCTCTTCTCGCCGGCATGGGA
GAGAAGGGCGGAAGTGAAACAGGGCGGAACATCAGAGGATCAAGTTGGTT
GTCCCGACCTTCTCCAGGTTGTCCGCGCAGCAAGAGCTCGCGTGCTGACT
AGCCCCGTTGGCCAAGCTGTGCGCGAATCGCCTGCATGTAAACCGCATGA
GATGCGGTTCAGCCTTTGTTATTGTTCGTGTCCCCAAACATTTCAGCCTA
CGCTGACCGATTGTGCCTGACCTCGTCAAAAATAATCTCCCTGTCCCCGC
CCCCTTCCCCCCGCAACCCCTTCCCTTCTTCTCTGCTGCCCTCCCCCGCC
TTCGACCGCCTGCTTTTCGTGGATGCTCGTCGTTTTTTTTTCCCTCAACG
CGTGTTGCTGTCGCCGCTGCCGCATGGTGTGTAACGTGTGTTCACATTCG
TTGGGCAATGCAGCACTTTCTTGGGGAACTTTTTGAGCAGCGCTGGGAAG
AAGTCTCGAAAATCTTTGGCGAGAGACACGTGAGTTGTTTAGTATTTCCA
ATTAGTATCAATTTCATTTCTCTCGAGTCGTTATTACTACAAGTAATTGT
TTGTCATCACCTTGACTTTTTTAGCGGCGCTGGGAAGAAGTCTCGAGGAT
TTCTGGCCAAAGGCTCGTGAGTGGAGAATATTGGATCGAAACGATAAAAT
GTTGCGCAAGATGCCGACACTTCCAAAATAGAACGCTCGCCTTGTGGTGA
CCGGGTAGATGAGTGAGAGAGGGCGGACCAGGTTTGACACTCCGCGTTTG
GACGTGAACTGATTGAATACGACGGAGCGTGTGTCTGGCCAACTTTTTCA
GGACCAACATCAGAAATGAAGGAACTAGAAAAATTATGACAAAGTTATGA
GATGTGTGCTTTCGATGGAAAATTACACATACATAGATGTCTTTCGATGC
GGGTTCGGTTCCTCGACGACGGCGGTACTCATCAGTAATAACGTTCGGAA
TGGCGGGAGAAACGAATGATGAAGGGTGTCGACAATACGAGGAAATAACG
ACACTCATCATGATGGCGTGTTTTACTCCATGCAGGTTCGGTTCTTCGGA
CGGCAGCACCTCTCCGCAGAGAGACAGCGACGATCGGAGGCAGTCGACGC
TCACCGAAGATAAAGTGAGACGGGCAGACAAGCGGGGCGTGGGTGGGGGT
TGACTCTCCTCCCGGTCTTCGTGGGTGTGTGTGGGTGTGTTTCGCGCCCT
TCCTCTGCTTCTCTCTCTCTCTCTGTGTGTGTCTCTCTCTCTCTGTCTCT
GTCTCTCTCTCTCTGTCTCTCTGTCTCTCTCTCTCGCTCTCTCTCTGTGT
GTCTCTCTCCCTCCCTCCCTCTCTCGGTCTCTCTGTCTCTCTCTCTCTGT
CTCTGTCTCTCTCTCTCTGTCTCTCTCCTCCTCTCCCCCCCCTCCCTCCC
TCCCTCCCCCCCTCCCTCCCCCCCCCCCTCTCTCTCTCTCTCTCTCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTACCCCCTTCTCTCTC
GTCTACCTCCCCCTCTGCCTCCTGTGGAGGTCCCGTGAAGCTTGTTGACT
CCGATGATCTCGATGTAAAAAAAAGAGCACATCCTGTTCTGTTACCTTGG
TCAAAAACATGATCACTTGCTTGTTGGTTGCCCTTCTTTGCACGTTGTCC
GTTGTGTCTAGATGTAGTTCACTACTAATCAGGCACACCTTTCCTTTCGT
TTCCGAAGTCTCCAGCATGCGCTTTTTTTTTCTTCTTGAAATCTGCCTGT
ACTGCACACCGCCTTCCACGGCACCCCGGGACTGTACCGGTCTAGACCGT
TCGAGATTGCCTCACGGAGAGCTACAGTTGCTGTCTTCGCTAGACGAGAG
GCTACGTCGGCGGCTGGGACGGGCTCCTTCCATGCTGCTCGCGAAGTTTG
AAGCTCTATCTATGTCGGCCGGCAACAAACGCAGAAGCTATTCGTTCCTG
CTCGTGCAAGAGGCCCGACCCGCGCTCGTGCAGCAGGCCCGATTCACCCT
CGGGGGGCGCTCTCGCCATCCTCTTTTTGCCTTGCCACGTGGTGGATATT
GCCGCGGAAACCCTTAATTACTACTAGACATCGTCCCCCCCTCCCCTGCC
CTCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTGCTCTCCCCCCATCTG
ACCACTATCCCGCCCCTTCCCTCCCTCCTTCCCTCCCTTCCTCCCTCCTC
CCCTCTCACCCTCACTCGCTCCTCTTCTCATGTTCGGCATCTATCACTAT
CAGGATGACGACACTTTGGCCGCGTCGTCCCAGACCTCTGCCGTAGCGAG
GCTTATCGCAAAGGCGGAGGGAAGATCGGCGGCCAACAGGTCGAACAGGG
CTCTTGGCGGTCCTAAGGGATCGGTGAGTCACACTTGTGCGCCTCCCGCC
TCCCCCTAGCCCTTCCTCCCCATACTCCCTCGCTCTGTACGTAAGTAGTT
CCAACCCTCCTGACTAAGGGAAGTTATGGCGGTTCTCGGTCAAAGGGGTG
CCGCAAGAGCTGCGTAGCCGTGCACGCACGTCAATTCATGCCCCCGCCGC
CCGTTCCCCCAGTGAAAACATGAGAATTTGACAAGAAAAGGAAAAACGGG
AAAAAGGCGACGCTTGTGCAACAAAGAGGCAAAAAAAGGGCGCTTGGTTT
GGTCATCTGCATGTTCCGTTTAGCAAGCGTTGTCCAATCGTTGGACGTGG
ATATTGTTTTGTTCCTCCCGAACTACCTCCTCTATTTTGGTTACTTTAGT
ACCCGAGGCCTCGCTGTCTCGCGCCTCTTCCCTCGGCTCACTTATGTTCT
CATTCGCCGCGCTTGCCGTTTTTTTCTTGTTTTTTCCGTTTATTTTCTTG
CTGTGTCTTGTGCCGCCAGTCGAAGTGGGCCGTGGCCGGTGCTCACTAGT
GCGGCAAATCACGATGCCCACCCCGCAACCCATCACTCTCGTCTTCCTTG
CCGAAGAGCGCTCCCGCGTCGCGCGCCCTGACCTCTCCTGCTTGAATGGG
AGGAGGGACGGGGATTGTTGCCGGGGTGTGAAAGATGCAATGGAACGCGG
CTGGGGTAATCATTTTTCGGAGCGTGGCGGTCAGAGTTAGTTTCATTTCG
CCCAATAGGAATTTTATGGTCTAATAAAAACAGCTCGGGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig7:1035957..1039396+

>mRNA_P-fluviatile_contig7.13509.1 ID=mRNA_P-fluviatile_contig7.13509.1|Name=mRNA_P-fluviatile_contig7.13509.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=642bp|location=Sequence derived from alignment at P-fluviatile_contig7:1035957..1039396+ (Porterinema fluviatile SAG_2381)
GCCTCCACCCGGACTTCGAGCTCAAGGCCTCCACCCGGACTTCGAGCTCA
AGCACTTTCTTGGGGAACTTTTTGAGCAGCGCTGGGAAGAAGTCTCGAAA
ATCTTTGGCGAGAGACACCACTTTCTTGGGGAACTTTTTGAGCAGCGCTG
GGAAGAAGTCTCGAAAATCTTTGGCGAGAGACACGTTCGGTTCTTCGGAC
GGCAGCACCTCTCCGCAGAGAGACAGCGACGATCGGAGGCAGTCGACGCT
CACCGAAGATAAAGTTCGGTTCTTCGGACGGCAGCACCTCTCCGCAGAGA
GACAGCGACGATCGGAGGCAGTCGACGCTCACCGAAGATAAAGATGACGA
CACTTTGGCCGCGTCGTCCCAGACCTCTGCCGTAGCGAGGCTTATCGCAA
AGGCGGAGGGAAGATCGGCGGCCAACAGGTCGAACAGGGCTCTTGGCGGT
CCTAAGGGATCGGATGACGACACTTTGGCCGCGTCGTCCCAGACCTCTGC
CGTAGCGAGGCTTATCGCAAAGGCGGAGGGAAGATCGGCGGCCAACAGGT
CGAACAGGGCTCTTGGCGGTCCTAAGGGATCGTCGAAGTGGGCCGTGGCC
GGTGCTCACTAGTCGAAGTGGGCCGTGGCCGGTGCTCACTAG
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