mRNA_P-fluviatile_contig7.13491.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig7.13491.1 vs. uniprot
Match: A0A6H5L6R8_9PHAE (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6R8_9PHAE) HSP 1 Score: 147 bits (371), Expect = 1.180e-39 Identity = 84/134 (62.69%), Postives = 87/134 (64.93%), Query Frame = 3
Query: 3 IPLHALADPQMKAFFDFANICLPGDNHPAEHIPFMLSKE---------------------------------------VVQRVLKIAMLKKSMSARDIVGQVNDTLSEEFNLRASRCIGFMLDGCAANLLALYS 287
IPLHAL DPQMKAFFDFANI PG +H AEH+PF+L KE VVQRVLKIAMLKKSMSARDIVGQVNDTL EEFNLRASRCIGFMLDGCAANLLAL S
Sbjct: 33 IPLHALEDPQMKAFFDFANIRAPGRSHLAEHVPFLLRKELDTTLSELGNGNYTVCFDATPYRCECFGIGLRFINQNGQVVQRVLKIAMLKKSMSARDIVGQVNDTLGEEFNLRASRCIGFMLDGCAANLLALDS 166
BLAST of mRNA_P-fluviatile_contig7.13491.1 vs. uniprot
Match: A0A6H5JN03_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN03_9PHAE) HSP 1 Score: 138 bits (347), Expect = 7.440e-37 Identity = 78/134 (58.21%), Postives = 83/134 (61.94%), Query Frame = 3
Query: 3 IPLHALADPQMKAFFDFANICLPGDNHPAEHIPFMLSKE---------------------------------------VVQRVLKIAMLKKSMSARDIVGQVNDTLSEEFNLRASRCIGFMLDGCAANLLALYS 287
IPLHAL DPQMK FFDFANIC+PGD+H A+HIP +L E VVQ VLKI ML KSMSARDIVGQVNDTLSEEF L+ASRCIGFMLDGC ANLLAL S
Sbjct: 33 IPLHALGDPQMKVFFDFANICMPGDSHLAKHIPVLLRTELDTALSELGDGNYTVCFDPTPYRCECFGIELRFIDQKGQVVQHVLKIEMLTKSMSARDIVGQVNDTLSEEFCLKASRCIGFMLDGCTANLLALDS 166
BLAST of mRNA_P-fluviatile_contig7.13491.1 vs. uniprot
Match: A0A6H5JGW7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGW7_9PHAE) HSP 1 Score: 123 bits (308), Expect = 2.240e-31 Identity = 66/95 (69.47%), Postives = 67/95 (70.53%), Query Frame = 3
Query: 3 IPLHALADPQMKAFFDFANICLPGDNHPAEHIPFMLSKEVVQRVLKIAMLKKSMSARDIVGQVNDTLSEEFNLRASRCIGFMLDGCAANLLALYS 287
IPLHALADPQMKAFFDFANI LPGDNH AEHIPF+L KEV NDTL EEFNLRASRCIGFMLDGCAANLLAL S
Sbjct: 26 IPLHALADPQMKAFFDFANIWLPGDNHLAEHIPFLLKKEV-----------------------NDTLGEEFNLRASRCIGFMLDGCAANLLALDS 97
BLAST of mRNA_P-fluviatile_contig7.13491.1 vs. uniprot
Match: A0A6H5KX97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX97_9PHAE) HSP 1 Score: 81.6 bits (200), Expect = 4.010e-18 Identity = 36/40 (90.00%), Postives = 38/40 (95.00%), Query Frame = 3
Query: 3 IPLHALADPQMKAFFDFANICLPGDNHPAEHIPFMLSKEV 122
IPLHALADPQMKAFFDFANICLPGDNH AEHIPF+L KE+
Sbjct: 26 IPLHALADPQMKAFFDFANICLPGDNHLAEHIPFLLKKEL 65
BLAST of mRNA_P-fluviatile_contig7.13491.1 vs. uniprot
Match: A0A6H5K4R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R7_9PHAE) HSP 1 Score: 87.4 bits (215), Expect = 4.580e-18 Identity = 43/93 (46.24%), Postives = 63/93 (67.74%), Query Frame = 3
Query: 3 IPLHALADPQMKAFFDFANICLPGDNHPAEHIPFMLSKEVVQRVLKIAMLKKSMSARDIVGQVNDTLSEEFNLRASRCIGFMLDGCAANLLAL 281
+PL+AL +P AF ++ LP H AEHIP +L +E QRVL+++MLKKSM+A DI G+VN ++ E++L ++C + D AANLLA+
Sbjct: 342 VPLNALGNPVFGAFLAHLDVDLPSAGHLAEHIPLILEEEAAQRVLRLSMLKKSMTADDIAGEVNRIVTHEYSLDPNKCQAIIGDSGAANLLAM 434
BLAST of mRNA_P-fluviatile_contig7.13491.1 vs. uniprot
Match: A0A6H5JJR7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR7_9PHAE) HSP 1 Score: 76.3 bits (186), Expect = 3.870e-14 Identity = 40/93 (43.01%), Postives = 58/93 (62.37%), Query Frame = 3
Query: 3 IPLHALADPQMKAFFDFANICLPGDNHPAEHIPFMLSKEVVQRVLKIAMLKKSMSARDIVGQVNDTLSEEFNLRASRCIGFMLDGCAANLLAL 281
+PL+ L + AF ++ LP H AEHIP +L +E RV ++ MLKKSM A DI G+VN ++ E++L ++C + D CAANLLA+
Sbjct: 440 VPLNVLGNRVFGAFLAHLDVDLPSAGHLAEHIPLILEEE---RVRRLGMLKKSMMADDIAGEVNRIVTHEYSLDPNKCRAIIGDSCAANLLAM 529
BLAST of mRNA_P-fluviatile_contig7.13491.1 vs. uniprot
Match: A0A6H5L3U5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3U5_9PHAE) HSP 1 Score: 67.0 bits (162), Expect = 4.780e-11 Identity = 30/40 (75.00%), Postives = 34/40 (85.00%), Query Frame = 3
Query: 3 IPLHALADPQMKAFFDFANICLPGDNHPAEHIPFMLSKEV 122
IPLHAL DPQMKAFFDFANI PG +H A+H+PF+L KEV
Sbjct: 274 IPLHALEDPQMKAFFDFANIRAPGRSHLAKHVPFLLRKEV 313
BLAST of mRNA_P-fluviatile_contig7.13491.1 vs. uniprot
Match: A0A6H5KEZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEZ7_9PHAE) HSP 1 Score: 64.7 bits (156), Expect = 2.270e-10 Identity = 31/55 (56.36%), Postives = 42/55 (76.36%), Query Frame = 3
Query: 117 EVVQRVLKIAMLKKSMSARDIVGQVNDTLSEEFNLRASRCIGFMLDGCAANLLAL 281
E+ QR+L ++ML KSM +DI G+VN+ L+ F L +RC+GFMLDGCAAN+ AL
Sbjct: 68 EICQRLLSLSMLAKSMDFKDIFGEVNNVLAR-FGLDPARCVGFMLDGCAANMKAL 121
BLAST of mRNA_P-fluviatile_contig7.13491.1 vs. uniprot
Match: A0A6H5K2F8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2F8_9PHAE) HSP 1 Score: 63.2 bits (152), Expect = 1.440e-9 Identity = 30/57 (52.63%), Postives = 40/57 (70.18%), Query Frame = 3
Query: 9 LHALADPQMKAFFDFANICLPGDNHPAEHIPFMLSKEVVQRVLKIAMLKKSMSARDI 179
L+AL +P + F N+ LP H AEHIP +L +EV QRVL+++MLKKSM+A DI
Sbjct: 250 LNALGNPVFEKFLAHVNVNLPSSGHLAEHIPLILEEEVAQRVLRLSMLKKSMTADDI 306
BLAST of mRNA_P-fluviatile_contig7.13491.1 vs. uniprot
Match: A0A6H5JD81_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD81_9PHAE) HSP 1 Score: 62.4 bits (150), Expect = 2.850e-9 Identity = 30/57 (52.63%), Postives = 41/57 (71.93%), Query Frame = 3
Query: 111 SKEVVQRVLKIAMLKKSMSARDIVGQVNDTLSEEFNLRASRCIGFMLDGCAANLLAL 281
S +V QRVL+++MLKKSM+A DI G+VN ++ E+ L +C M D CAANLLA+
Sbjct: 276 SGQVAQRVLRLSMLKKSMTASDIAGEVNRIVTHEYGLDPDKCRAIMGDSCAANLLAM 332 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig7.13491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 14
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig7.13491.1 >prot_P-fluviatile_contig7.13491.1 ID=prot_P-fluviatile_contig7.13491.1|Name=mRNA_P-fluviatile_contig7.13491.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=85bp MKAFFDFANICLPGDNHPAEHIPFMLSKEVVQRVLKIAMLKKSMSARDIVback to top mRNA from alignment at P-fluviatile_contig7:733754..734590- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig7.13491.1 ID=mRNA_P-fluviatile_contig7.13491.1|Name=mRNA_P-fluviatile_contig7.13491.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=837bp|location=Sequence derived from alignment at P-fluviatile_contig7:733754..734590- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig7:733754..734590- >mRNA_P-fluviatile_contig7.13491.1 ID=mRNA_P-fluviatile_contig7.13491.1|Name=mRNA_P-fluviatile_contig7.13491.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=510bp|location=Sequence derived from alignment at P-fluviatile_contig7:733754..734590- (Porterinema fluviatile SAG_2381)back to top |