mRNA_P-fluviatile_contig68.13344.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig68.13344.1
Unique NamemRNA_P-fluviatile_contig68.13344.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig68.13344.1 vs. uniprot
Match: D7G3K5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3K5_ECTSI)

HSP 1 Score: 208 bits (529), Expect = 1.430e-64
Identity = 97/110 (88.18%), Postives = 104/110 (94.55%), Query Frame = 1
Query:    1 ICDTYPEWLATHRDNLPPADYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKQLAPGLEFNADGAPIMPNMGEGMMPNLPGFPMGGADGQNCCIS 330
            ICDTYPEWLATHR+ L PADYQRYG+QYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIK+LAPGLEFNA+GAPIMPN+GEGMMPNLPGFPMG    +NCC+S
Sbjct:  251 ICDTYPEWLATHRERLAPADYQRYGQQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKELAPGLEFNAEGAPIMPNVGEGMMPNLPGFPMG-EGAENCCVS 359          
BLAST of mRNA_P-fluviatile_contig68.13344.1 vs. uniprot
Match: A0A482SN89_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SN89_9ARCH)

HSP 1 Score: 148 bits (373), Expect = 3.130e-43
Identity = 67/96 (69.79%), Postives = 82/96 (85.42%), Query Frame = 1
Query:    1 ICDTYPEWLATHRDNLPPADYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKQLAPGLEFNADGAPIMPNMGEGMMPNLPG 288
            IC+ YPEWLA  R NL  A+Y+ YG+QYQ FQ++LAVY+TEPDNFPRLMELM D+Q++GQ PAEIIK LAPGL+F+ +G PIMPNMG GMMP++PG
Sbjct:   61 ICEKYPEWLAVQRKNLTLAEYENYGRQYQCFQKLLAVYDTEPDNFPRLMELMFDLQQYGQPPAEIIKGLAPGLKFDENGMPIMPNMGAGMMPSMPG 156          
BLAST of mRNA_P-fluviatile_contig68.13344.1 vs. uniprot
Match: A0A7S1XKR9_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XKR9_9STRA)

HSP 1 Score: 149 bits (377), Expect = 2.450e-42
Identity = 68/96 (70.83%), Postives = 80/96 (83.33%), Query Frame = 1
Query:    1 ICDTYPEWLATHRDNLPPADYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKQLAPGLEFNADGAPIMPNMGEGMMPNLPG 288
            +C+ +PEWLA  R++L   DYQRYGK YQ FQR++A YETEPDNFPRLMELMQD+QE GQ PAEIIK+LAPGLEFN DG PIMPN+G  +MP +PG
Sbjct:  198 VCEKFPEWLADKREHLSEDDYQRYGKMYQGFQRLVATYETEPDNFPRLMELMQDVQEFGQPPAEIIKELAPGLEFNEDGMPIMPNVGPNVMPFIPG 293          
BLAST of mRNA_P-fluviatile_contig68.13344.1 vs. uniprot
Match: F0XX37_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XX37_AURAN)

HSP 1 Score: 145 bits (365), Expect = 3.800e-42
Identity = 70/115 (60.87%), Postives = 86/115 (74.78%), Query Frame = 1
Query:    1 ICDTYPEWLATHRDNLPPADYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKQLAPGLEFNADGAPIMPNMG------EGMMPNLPGFPMGGADGQNCCI 327
            +CD YPEWLA   ++L   +Y RYG QYQ FQRV+AVYETEPDNFPRLMEL+QD+Q++GQVP+EIIK+LAP LEF ADG P+M NMG      EG +P +PG P+  AD   C +
Sbjct:   54 VCDKYPEWLAEKYESLSKEEYVRYGTQYQYFQRVVAVYETEPDNFPRLMELLQDLQKYGQVPSEIIKELAPALEFGADGMPVM-NMGDNFFPKEGAVPGMPGLPVPDADSAQCSV 167          
BLAST of mRNA_P-fluviatile_contig68.13344.1 vs. uniprot
Match: A0A7S3M8F4_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8F4_9STRA)

HSP 1 Score: 148 bits (374), Expect = 7.970e-42
Identity = 65/96 (67.71%), Postives = 81/96 (84.38%), Query Frame = 1
Query:    1 ICDTYPEWLATHRDNLPPADYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKQLAPGLEFNADGAPIMPNMGEGMMPNLPG 288
            ICD +PEWLA H+ N+  A+Y  YGKQYQ+FQ+++AVY+TEPDNFPRLMELM DMQ++GQ PA+IIK LAPGL+F+ +G PIMPNMG GM P +PG
Sbjct:  193 ICDKFPEWLAIHKKNMNGAEYDNYGKQYQTFQKIIAVYDTEPDNFPRLMELMFDMQKYGQPPADIIKDLAPGLQFDENGMPIMPNMGAGMFPQMPG 288          
BLAST of mRNA_P-fluviatile_contig68.13344.1 vs. uniprot
Match: A0A7S2BNY5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BNY5_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.950e-41
Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 1
Query:    1 ICDTYPEWLATHRDNLPPADYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKQLAPGLEFNADGAPIMPNMGEGMMPNLPG--------FPMGGADGQNCCI 327
            +C+ YPEWLA   D+L   +Y+RYG QYQ FQR+ AVYETEPDN  RLMELM D+Q++GQ PAEIIK+LAPGLEFNA+G P+MP +GE MMP   G        FP  G DG+ C +
Sbjct:   95 VCEKYPEWLAVQVDSLDKEEYERYGNQYQFFQRIRAVYETEPDNLARLMELMHDVQQYGQPPAEIIKELAPGLEFNAEGMPVMPGLGETMMPGQEGXXXXXXLPFPETGPDGKPCTV 211          
BLAST of mRNA_P-fluviatile_contig68.13344.1 vs. uniprot
Match: A0A6G0R2E4_9STRA (Uncharacterized protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6G0R2E4_9STRA)

HSP 1 Score: 145 bits (367), Expect = 7.710e-41
Identity = 69/111 (62.16%), Postives = 82/111 (73.87%), Query Frame = 1
Query:    1 ICDTYPEWLATHRDNLPPADYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKQLAPGLEFNADGAPIMPNMGEGMMPNL---PGFPMGGADGQNCC 324
            IC+ YPEWLA     L   DY+RYGKQYQ FQ+++AVYE EPDNF RL ELMQ+MQE GQ P+EI+K LAPGL+F+ +G PIMPNMG GM P +   PG P+GG  GQ  C
Sbjct:  191 ICERYPEWLAEKESLLSKEDYERYGKQYQYFQQIVAVYEAEPDNFTRLSELMQEMQETGQPPSEIVKDLAPGLQFDDEGMPIMPNMGAGMFPGMAGMPGMPLGGTPGQEQC 301          
BLAST of mRNA_P-fluviatile_contig68.13344.1 vs. uniprot
Match: A0A8K1CJW8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CJW8_PYTOL)

HSP 1 Score: 145 bits (367), Expect = 1.070e-40
Identity = 68/111 (61.26%), Postives = 83/111 (74.77%), Query Frame = 1
Query:    1 ICDTYPEWLATHRDNLPPADYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKQLAPGLEFNADGAPIMPNMGEGMMPNL---PGFPMGGADGQNCC 324
            IC+ YP WLA     L   DY+RYGKQY+ FQ ++AVYE+EPDNF RL ELMQ+MQE GQ P+EI+K+LAPGL+F+ +G P+MPNMG GM P +   PGFPMGG  GQ  C
Sbjct:  205 ICERYPAWLAEKESLLSKEDYERYGKQYRYFQEIIAVYESEPDNFARLSELMQEMQETGQPPSEIVKELAPGLQFDDEGMPVMPNMGAGMFPGMAGMPGFPMGGGAGQEQC 315          
BLAST of mRNA_P-fluviatile_contig68.13344.1 vs. uniprot
Match: A0A1V9Z107_9STRA (Uncharacterized protein n=2 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9Z107_9STRA)

HSP 1 Score: 144 bits (364), Expect = 1.580e-40
Identity = 72/111 (64.86%), Postives = 82/111 (73.87%), Query Frame = 1
Query:    1 ICDTYPEWLATHRDNLPPADYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKQLAPGLEFNADGAPIMPNMGEGMMPN---LPGFPMGGADGQNCC 324
            IC  YPEWLA     L   DY RYGKQYQ FQ++LAVYETEPDN+ RL ELMQ+MQE GQ P+EI+K+LAPGL+F+ DG PIMPNMG GM P    LPG PM G  GQ+ C
Sbjct:  178 ICAKYPEWLAEKEPVLSKEDYARYGKQYQYFQQILAVYETEPDNYARLSELMQEMQECGQPPSEIVKELAPGLQFDDDGMPIMPNMGPGMFPGMAGLPGAPMPGMPGQDQC 288          
BLAST of mRNA_P-fluviatile_contig68.13344.1 vs. uniprot
Match: A0A7S2BQB6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BQB6_9STRA)

HSP 1 Score: 144 bits (364), Expect = 3.380e-40
Identity = 69/117 (58.97%), Postives = 84/117 (71.79%), Query Frame = 1
Query:    1 ICDTYPEWLATHRDNLPPADYQRYGKQYQSFQRVLAVYETEPDNFPRLMELMQDMQEHGQVPAEIIKQLAPGLEFNADGAPIMPNMGEGMMPNLPG--------FPMGGADGQNCCI 327
            +C+ YPEWLA   D+L   +Y+RYG QYQ FQR+ AVYETEPDN  RLMELM D+Q++GQ PAEIIK+LAPGLEFNA+G P+MP +GE MMP   G        FP  G DG+ C +
Sbjct:  206 VCEKYPEWLAVQVDSLDKEEYERYGNQYQFFQRIRAVYETEPDNLARLMELMHDVQQYGQPPAEIIKELAPGLEFNAEGMPVMPGLGETMMPGQEGXXXXXXLPFPETGPDGKPCTV 322          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig68.13344.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G3K5_ECTSI1.430e-6488.18Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A482SN89_9ARCH3.130e-4369.79Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S1XKR9_9STRA2.450e-4270.83Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
F0XX37_AURAN3.800e-4260.87Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S3M8F4_9STRA7.970e-4267.71Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7S2BNY5_9STRA1.950e-4158.97Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A6G0R2E4_9STRA7.710e-4162.16Uncharacterized protein n=5 Tax=Phytophthora TaxID... [more]
A0A8K1CJW8_PYTOL1.070e-4061.26Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A1V9Z107_9STRA1.580e-4064.86Uncharacterized protein n=2 Tax=Saprolegniaceae Ta... [more]
A0A7S2BQB6_9STRA3.380e-4058.97Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig68contigP-fluviatile_contig68:415037..417734 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score212.2
Seed ortholog evalue1.2e-52
Seed eggNOG ortholog2880.D7G3K5
Preferred namePEX19
KEGG koko:K11804,ko:K13337,ko:K21398
KEGG TC2.A.55.2.1,2.A.55.2.2,3.A.20.1,9.A.17.1
KEGG Pathwayko04142,ko04146,ko04216,ko04978,map04142,map04146,map04216,map04978
GOsGO:0000151,GO:0000268,GO:0002119,GO:0002164,GO:0003674,GO:0005048,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005829,GO:0005886,GO:0005903,GO:0006457,GO:0006464,GO:0006605,GO:0006612,GO:0006625,GO:0006807,GO:0006810,GO:0006886,GO:0006996,GO:0007031,GO:0007275,GO:0007399,GO:0008104,GO:0008150,GO:0008152,GO:0009791,GO:0009987,GO:0015031,GO:0015833,GO:0015919,GO:0016020,GO:0016021,GO:0016043,GO:0016557,GO:0016559,GO:0017038,GO:0019538,GO:0019899,GO:0031090,GO:0031224,GO:0031253,GO:0031461,GO:0031526,GO:0031647,GO:0031903,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0033036,GO:0033218,GO:0033328,GO:0033365,GO:0034613,GO:0036105,GO:0036211,GO:0042277,GO:0042579,GO:0042802,GO:0042886,GO:0042995,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043574,GO:0043687,GO:0044085,GO:0044091,GO:0044092,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044459,GO:0044463,GO:0044464,GO:0045046,GO:0045184,GO:0046907,GO:0047485,GO:0048285,GO:0048731,GO:0048856,GO:0050821,GO:0051098,GO:0051100,GO:0051117,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0055085,GO:0061077,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070727,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071944,GO:0072321,GO:0072594,GO:0072657,GO:0072662,GO:0072663,GO:0080008,GO:0090150,GO:0098588,GO:0098590,GO:0098805,GO:0098862,GO:0120025,GO:0120038,GO:1900130,GO:1900131,GO:1901564,GO:1902494,GO:1990234
EggNOG free text desc.peroxisome membrane targeting sequence binding
EggNOG OGsKOG3133@1,KOG3133@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02000,ko04121
Hectar predicted targeting categoryother localisation
Exons3
Model size333
Cds size333
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig68.13344.1prot_P-fluviatile_contig68.13344.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig68 415037..417734 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817092.6091244-CDS-P-fluviatile_contig68:415036..4151531622817092.6091244-CDS-P-fluviatile_contig68:415036..415153Porterinema fluviatile SAG_2381CDSP-fluviatile_contig68 415037..415153 +
1693571083.7720401-CDS-P-fluviatile_contig68:415036..4151531693571083.7720401-CDS-P-fluviatile_contig68:415036..415153Porterinema fluviatile SAG_2381CDSP-fluviatile_contig68 415037..415153 +
1622817092.6214042-CDS-P-fluviatile_contig68:415589..4156521622817092.6214042-CDS-P-fluviatile_contig68:415589..415652Porterinema fluviatile SAG_2381CDSP-fluviatile_contig68 415590..415652 +
1693571083.7842977-CDS-P-fluviatile_contig68:415589..4156521693571083.7842977-CDS-P-fluviatile_contig68:415589..415652Porterinema fluviatile SAG_2381CDSP-fluviatile_contig68 415590..415652 +
1622817092.63193-CDS-P-fluviatile_contig68:417581..4177341622817092.63193-CDS-P-fluviatile_contig68:417581..417734Porterinema fluviatile SAG_2381CDSP-fluviatile_contig68 417582..417734 +
1693571083.7957907-CDS-P-fluviatile_contig68:417581..4177341693571083.7957907-CDS-P-fluviatile_contig68:417581..417734Porterinema fluviatile SAG_2381CDSP-fluviatile_contig68 417582..417734 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig68.13344.1

>prot_P-fluviatile_contig68.13344.1 ID=prot_P-fluviatile_contig68.13344.1|Name=mRNA_P-fluviatile_contig68.13344.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=111bp
ICDTYPEWLATHRDNLPPADYQRYGKQYQSFQRVLAVYETEPDNFPRLME
LMQDMQEHGQVPAEIIKQLAPGLEFNADGAPIMPNMGEGMMPNLPGFPMG
GADGQNCCIS*
back to top

mRNA from alignment at P-fluviatile_contig68:415037..417734+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig68.13344.1 ID=mRNA_P-fluviatile_contig68.13344.1|Name=mRNA_P-fluviatile_contig68.13344.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=2698bp|location=Sequence derived from alignment at P-fluviatile_contig68:415037..417734+ (Porterinema fluviatile SAG_2381)
ATCTGCGATACCTACCCCGAGTGGCTCGCGACCCACAGAGATAACCTGCC ACCGGCCGACTACCAGCGCTACGGGAAGCAGTACCAGAGCTTCCAACGGG TGCTCGCCGTTTACGAGGTGAACCTCGGCATCGTTTCGCCCACTCCTTCT CCAGGCTGACGAAATGGAGACGAGACGGAGATATAGAGTTGTGGGCTGCG GATAGTGCATGTGCGATCCTGAAATGTCCGTCCACCGGAGTCATGCAAGC GCATCCATCCGCTCGTTCTATGGGCGACCTTACCGACTCCCGTCTCCACG TTTCTATCTATCTTAATGGTCGATTCGTGTCCAATTTTGGAAGCGTGTGC GACGCAGACTTAGCTGGGACCTGTGCAGCGACGTCGTTGCTGTCGCGATG TCGTGCGCTGTGGTAATGTCTAAAGTCAAATGCGACTGTAGTCGTCTTGT GCTTGTGTTTCTCGCGCCACGCAGACAAAGCATCTGCGTGACGCGGTGCC GACAAGACGTGCGATCGGTCCTGTTGTGCTGTGTGTTTTTTCGTGGCGTG CAGACGGAGCCGGATAACTTCCCCCGGTTGATGGAGCTCATGCAGGACAT GCAAGAGCACGGCCAGGTAACGACGTTTGAATGTTGGAACTTCTTTCCGC TACTCTCGGGACCTCGAGTGTTTCTGGCAATTAACATTCCTATCCTCCTT CGGGGTCACGTCGAGTGTTGGTGCCGCTGCACATTTCATCCATCTTCCGG CCCACCGTGGCCCGGAGTGACTTTTTTTTTGCTCTGCAATTCCGCTTTCG CCGGCATCTTGTCAACAGTCGCTTCAACAGTCCCGTGAGCCCCGTGAGTG CAGGGGGTCGATTACAAGTGGCCGCTTTACGAGTGGGATGGGGTCGTCTG CGCTGGTGTCCCTGAAAGGGTTGTTTGGTGTGGACGCGAAGACCACACAG ACGGCTCACGAAATTCCAACCAAGGGGAAGCGCAGAGAAACAGCAATCAA GGGAGAACGCTTCACGTGATTGTCGTTTTTCTTTGGGCTTCCTTGGCTGG AAATTCGGGATCCACTTGTGTGATCTTTGCGTCCATAGCGAGCTTCCGGG GATGCGGGTGCAGCCCCTCCCATATGTTTTCCACAGCAGCACCCTCTGTT TGCCTGTGGGCTGTCTCGTCGCCCGCCACCACCCACGGGACTGTTGACGG GACTTGTTCGCCGGAGTAAAGTTGCCAAGCTTTAGGGAAGGAGGAAATCT GAGGCCGCCGCGAAGACCAAAATAATCACTGCTTTCATATGCGACCACTC GAACCCTGAAGATGAAAACCGTGGTGTGCGTTAGTCAAGATTCGCTGACT TCGCGACTCCCTAAGGAGAGATTCGCGTGAGTGTCACATTTGAGCCTCGA GGATTACAATCAAAGCAGTCGTGCGTGACGGGGCAGGCAATGAGCAGCGA GGAATGCGCAAAATATATGCTTCTCACGCGGTAACGTATTCCCTCGACGA GCCCCACAGACTGCACTTTTCGGGTAGGGGGAAGAGGGGCTCAGCCGTGT GCATTGAATGCGGGAAAACGTTTGAATCCCCATCGACCAACACGACTCGA GCGAGCACACTTCGGCGCTCCGTGCCACAGCCCGCGACACACCAGGGACC GCAAGTTCGCACTGCGGAAGTAGGCTCTGCTGGCGGCACGTTTGTGCTGT GGCCGGTTCGTGCGCCAACGGTATCTGTGTCCTAGGCGGCGCACGCGCTT TGCAAGAGAATAAACCACGGGCATTGATTGCCGACTGAGAGCCGTTTCCC GCGAAAATGACGATAATCTCGAGGAAAATGAGGAATATCCTGCACATTTA CGTTTTTATTGCTTCCGGAAGTAAGTGTAGACAGGAATAATCGTTCATTT CAGTTCACTTAGGCGCGGCACTTCGAGGCTGAGATGAGGTGGGAGCTACT TGAACCCAAGTCGAGAGGTGTATTTGGAGGTAGGCTTGCGGAACGAAGAC GCTACCGTACACGTGCCCACCGACCTCTCCCGTGTTGATGCATATGCCCT GTTTATGTTTGTGTCGTGATAATCTTTCACTTTCGATGAAGGTCTTCATC GCTCGCTTCCCCGTACGGTGGCGGTGCTTTCCGAAGTGGTGCCGAACAAC GGTCAGGATCGGAAAAGAGTCGGATGCGGGGGACCGATGACGCGCGTGTG TTCCAGCTGTGGCATGCTTCAGTGTAGGGCGTGCGGAATCGTTGACGGCG ACAGCCTACGTTGCGGAATTCATTTACAACACGCAGCTAGCTGTCTTGTT TCACCTTGCCAAAGCGACAACAGAGCCAACAGCAGCTTCCACTTGATCGC TTTCTTCAACATCTCGCGGTGTCAATCAGCTCTTTTTCGCCGTTCCTTCC CTTTCTCCTGCCCGACTCGGTTCGTTTCCGTCCATTTATCTACGCATCTA AACCTTTCCCATCCCGCCAGCACTTTCAAGTCTCCGTACCCTATCCAACC GAATCGACCTAATGCAAAACTCCGCCATTCGCCGCCCACACAAAGGTTCC CGCGGAAATCATCAAGCAGTTGGCGCCGGGGCTGGAGTTCAACGCAGATG GGGCGCCGATCATGCCGAACATGGGGGAGGGCATGATGCCTAACCTCCCG GGATTCCCCATGGGCGGCGCGGATGGCCAAAATTGCTGCATCAGCTAA
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig68:415037..417734+

>mRNA_P-fluviatile_contig68.13344.1 ID=mRNA_P-fluviatile_contig68.13344.1|Name=mRNA_P-fluviatile_contig68.13344.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=666bp|location=Sequence derived from alignment at P-fluviatile_contig68:415037..417734+ (Porterinema fluviatile SAG_2381)
ATCTGCGATACCTACCCCGAGTGGCTCGCGACCCACAGAGATAACCTGCC
ACCGGCCGACTACCAGCGCTACGGGAAGCAGTACCAGAGCTTCCAACGGG
TGCTCGCCGTTTACGAGATCTGCGATACCTACCCCGAGTGGCTCGCGACC
CACAGAGATAACCTGCCACCGGCCGACTACCAGCGCTACGGGAAGCAGTA
CCAGAGCTTCCAACGGGTGCTCGCCGTTTACGAGACGGAGCCGGATAACT
TCCCCCGGTTGATGGAGCTCATGCAGGACATGCAAGAGCACGGCCAGACG
GAGCCGGATAACTTCCCCCGGTTGATGGAGCTCATGCAGGACATGCAAGA
GCACGGCCAGGTTCCCGCGGAAATCATCAAGCAGTTGGCGCCGGGGCTGG
AGTTCAACGCAGATGGGGCGCCGATCATGCCGAACATGGGGGAGGGCATG
ATGCCTAACCTCCCGGGATTCCCCATGGGCGGCGCGGATGGCCAAAATTG
CTGCATCAGCTAAGTTCCCGCGGAAATCATCAAGCAGTTGGCGCCGGGGC
TGGAGTTCAACGCAGATGGGGCGCCGATCATGCCGAACATGGGGGAGGGC
ATGATGCCTAACCTCCCGGGATTCCCCATGGGCGGCGCGGATGGCCAAAA
TTGCTGCATCAGCTAA
back to top