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Homology
BLAST of mRNA_P-fluviatile_contig67.13294.1 vs. uniprot
Match: D7FHB9_ECTSI (RPOLD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHB9_ECTSI) HSP 1 Score: 445 bits (1145), Expect = 9.830e-151 Identity = 226/260 (86.92%), Postives = 240/260 (92.31%), Query Frame = 1
Query: 1 MPNLRAPQQVEIVDLREDYVEFILSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLAAEPGHHYEYNYDCDCEDYCHKCSAVFTLDVSWDKKSLGRPEHMQDQPVLVTSADLIGDDPNLRPVHFAPSDQ-NSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQREEFVEICPAKVFGRDEKSGTIIVEHRDMCMYCDDCVYLAKTYKAR 777
MPNLRAPQ VEIVDLRED+VEF+LSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFL+HRLGLIPLAA+PG YEYNYDCDCEDYC KCSAVFTLDVSWDKK+LGRPEHMQDQPV VTSADL+ DP LR VHFAPSDQ NSDISQDAGI+IAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEP+IEINEEKEALLTPEQ+ EFVEICPAKV+GRDEKSGTI VEHRDMCM+ YL + + +R
Sbjct: 1 MPNLRAPQ-VEIVDLREDFVEFVLSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLSHRLGLIPLAADPGVQYEYNYDCDCEDYCDKCSAVFTLDVSWDKKALGRPEHMQDQPVHVTSADLVSSDPRLRAVHFAPSDQTNSDISQDAGIIIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPVIEINEEKEALLTPEQKAEFVEICPAKVYGRDEKSGTIFVEHRDMCMWRRTGRYLRRRWWSR 259
BLAST of mRNA_P-fluviatile_contig67.13294.1 vs. uniprot
Match: A0A835YK59_9STRA (Putative DNAdirected RNA polymerase II 36 kDa polypeptide A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK59_9STRA) HSP 1 Score: 393 bits (1009), Expect = 2.290e-129 Identity = 193/312 (61.86%), Postives = 247/312 (79.17%), Query Frame = 1
Query: 1 MPNLRAPQQVEIVDLREDYVEFILSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLAAEPGHHYEYNYDCDCEDYCHKCSAVFTLDVSWDKKSLGRPEHMQDQPVLVTSADLIGDDPNLRPVHFAPSDQNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQREEFVEICPAKVFGRDEKSGTIIVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPREDRFIFSVETNGSVTAEEVVVTALKVISEKLLNLRNDLMRM 936
MPN RAP+ +E+++L+ D+V+F+LS+TDTSVANALRRVMIAEVPTMAIDLVTI +NSS LQDEFLAHRLGL+PL EPG + YN DCDCED C +CS +LDVSW+ K+ GRP+H +D PV VTS+DL+ DP + PVHFA SD D SQD GI++AKL++GQR+QLTAVAKKGIAKEHAKWSPV VATY+F+PII++ ++ A LT QR++ VE CP KV+G DE++ I+V +R CMYCD+C +A + K RPEDD VV + +DRFIFSVETNG++ A++VV AL+ +S KL LRN+L+ +
Sbjct: 1 MPNTRAPK-IEVLELKADFVKFVLSDTDTSVANALRRVMIAEVPTMAIDLVTITENSSALQDEFLAHRLGLVPLRCEPGTKFVYNLDCDCEDNCEQCSVTLSLDVSWESKAAGRPDHEKDLPVFVTSSDLVSHDPRVGPVHFASSDI-IDASQDDGIMLAKLSRGQRLQLTAVAKKGIAKEHAKWSPVCVATYQFDPIIKVADDVSATLTVAQRQQVVESCPVKVYGLDERTNNIVVRNRLECMYCDECTNVASSLKLRPEDDAVVTVTASQDRFIFSVETNGTIDADQVVQQALEALSLKLQTLRNELINV 310
BLAST of mRNA_P-fluviatile_contig67.13294.1 vs. uniprot
Match: A0A7S2Y381_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y381_9STRA) HSP 1 Score: 329 bits (843), Expect = 3.480e-104 Identity = 169/336 (50.30%), Postives = 235/336 (69.94%), Query Frame = 1
Query: 25 QVEIVDLREDYVEFILSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLAAEPGH--HYEYNYDCDCEDYCHKCSAVFTLDVSWDKKSLGRPEHMQDQPVLVTSADLIGDDPNLRPVHFAPSDQNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQREEFVEICPAKVFGRDEKSGTIIVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPREDRFIFSVETNGSVTAEEVVVTALKVISEKLLNLRNDLMRMGDDQPWKQGE*R*IRTSRLPGM*ISWACPE 1026
+V++ +LR+D + F LS+TD SVANALRRVMIAE PT+AIDLVTI N+SV+QDEFLAHRLGLIP+ G + +NYDCDCEDYCH+C+ +F+LDVS+D+++ RP+H D P+ VTS DL+ ++P+++ VHFA +D+ SQDAGI + KLA+GQ ++LTA+AK G KEH+KW VATY+++PII++NEEK L+ EQ ++ E CP VF DEK+G + V +R CMYC++C L T KAR EDDP + I + F+F+VETNG++ AEEVV++AL V+ KL +L+ M + ++Q +Q + PG S P
Sbjct: 9 KVKVQELRDDCIRFELSDTDISVANALRRVMIAETPTLAIDLVTIETNTSVMQDEFLAHRLGLIPIRYHRGDVSKFRFNYDCDCEDYCHQCAVLFSLDVSFDQRAAMRPDHESDLPLTVTSQDLVSNNPDVQAVHFASADEQQQ-SQDAGIALLKLARGQAIKLTAIAKLGTQKEHSKWCTCCVATYQYDPIIKLNEEKLDQLSSEQVDQLAESCPVGVFEVDEKTGKLTVVNRMDCMYCEECTRLGDTMKARSEDDPFIDIHADTNVFLFTVETNGALLAEEVVLSALTVLGAKLRDLQMACMEIKEEQGNRQ------EANATPGSTASSTLPS 337
BLAST of mRNA_P-fluviatile_contig67.13294.1 vs. uniprot
Match: A0A8K1CE06_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE06_PYTOL) HSP 1 Score: 305 bits (782), Expect = 2.310e-95 Identity = 163/321 (50.78%), Postives = 221/321 (68.85%), Query Frame = 1
Query: 1 MPNLRAPQQVEIVDLREDYVEFILSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLAAEPG-----HHYEYNYDCDCEDYCHKCSAVFTLDVSWDKKSLGRPEHMQDQPVL-VTSADLIGDDPNLRPVHFAPSDQNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQREEFVEICPAKVFGRDEKSGTIIVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPREDRFIFSVETNGSVTAEEVVVTALKVISEKLLNLRNDLMRMGDD 945
MPN R P+ +E+V+LR+D+++F LS TD SVANA+RRVMIAEVPT+AIDLVTI N+SV+ DEFLAHRLG+IPL + G + Y+ DCDC+++C CS FTLDV + DQ VL VTS L DP +RP+HF+ ++ S+ +QD G++IAKL GQR++L+A+AK GI KEHAKWSPVAVAT+ +EPII +N+ L+ +Q+ E + CPA+V+ DE + V CMYCD+CV +A ++K PEDD + IR RED+FIFSVET G + EEVV+ AL +I EKL +L++ + + D
Sbjct: 1 MPNPRFPK-IEVVELRDDFIKFELSETDASVANAIRRVMIAEVPTLAIDLVTIEANTSVMTDEFLAHRLGMIPLFFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFTLDV------------VADQGVLTVTSESLRSTDPYIRPMHFSSEEEFSN-TQDTGVIIAKLGPGQRIKLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVMNTLSSDQKAELYKSCPAEVYDTDENYDQLTVGDAMRCMYCDECVKVANSFKDNPEDDAALTIRMREDKFIFSVETCGQLRPEEVVICALDIIREKLSSLKHQCLELSHD 307
BLAST of mRNA_P-fluviatile_contig67.13294.1 vs. uniprot
Match: W4FWZ6_9STRA (RPOLD domain-containing protein n=8 Tax=Aphanomyces TaxID=100860 RepID=W4FWZ6_9STRA) HSP 1 Score: 300 bits (767), Expect = 4.210e-93 Identity = 158/321 (49.22%), Postives = 214/321 (66.67%), Query Frame = 1
Query: 1 MPNLRAPQQVEIVDLREDYVEFILSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLAAEPG-----HHYEYNYDCDCEDYCHKCSAVFTLDVSWDKKSLGRPEHMQDQPVLVTSADLIGDDPNLRPVHFAPSDQNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQREEFVEICPAKVFGRDEKSGTIIVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPREDRFIFSVETNGSVTAEEVVVTALKVISEKLLNLRNDLMRMGDDQ 948
MPN R P+ +++ ++R+D+++F LS TDTSVANA+RRVMIAEVPT+AIDLV+I N+SV+ DEFLAHRLG+IPL E G + Y+ DCDC+++C CS F LDV + VTS L DP ++PVHF+ S++ ++ +QD G++IAKL GQR++L A+AK GI KEHAKWSPVAVATY FEPII +N+ T EQR E + CP +VF D+ T+ VE CMYCD+CV LA +Y+ PEDD V + +D+FIFSVET G + EEVV+ AL +I +KL L++ + + D+
Sbjct: 1 MPNTRFPK-IDLQEIRDDFIKFELSETDTSVANAIRRVMIAEVPTLAIDLVSIEVNTSVITDEFLAHRLGMIPLRLEGGLEAFKKRFVYSADCDCDEHCPNCSVEFELDV-----------RAESGTQTVTSDSLRSLDPYIKPVHFS-SEEEANNTQDTGVIIAKLGPGQRLKLNAIAKLGIGKEHAKWSPVAVATYMFEPIITLNQNVLNTYTSEQRVELYKSCPTRVFEIDDTYDTLQVEDNMRCMYCDECVKLASSYRENPEDDMAVTVTATQDKFIFSVETTGQLKPEEVVIWALDIIKDKLAALKHQCLELSQDE 308
BLAST of mRNA_P-fluviatile_contig67.13294.1 vs. uniprot
Match: K3W7V5_GLOUD (RPOLD domain-containing protein n=21 Tax=Oomycota TaxID=4762 RepID=K3W7V5_GLOUD) HSP 1 Score: 298 bits (762), Expect = 2.260e-92 Identity = 161/321 (50.16%), Postives = 217/321 (67.60%), Query Frame = 1
Query: 1 MPNLRAPQQVEIVDLREDYVEFILSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLAAEPG-----HHYEYNYDCDCEDYCHKCSAVFTLDVSWDKKSLGRPEHMQDQPVL-VTSADLIGDDPNLRPVHFAPSDQNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQREEFVEICPAKVFGRDEKSGTIIVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPREDRFIFSVETNGSVTAEEVVVTALKVISEKLLNLRNDLMRMGDD 945
MPN R P+ +EI +LR+D+++F LS TD SVANA+RRVMI+EVPT+AIDLV+I N+SV+ DEFLAHRLG+IPL + G + Y+ DCDC+++C CS F LDV DQ V+ VTS L DP +RPV+F+ S++ + +QD G++IAKL GQR++L+A+AK GI KEHAKWSPVAVAT+ +EPII +N+ A TPEQ+ E + CP +V+ DE V CMYCD+CV +A ++K PEDD V +R RED+FIFSVET G + EEVV+ AL +I EKL +L++ + + D
Sbjct: 1 MPNPRFPK-IEIQELRDDFIKFELSETDASVANAIRRVMISEVPTLAIDLVSIEVNTSVMTDEFLAHRLGMIPLYFDGGLENFRQRFVYSQDCDCDEHCPNCSVEFQLDVR------------ADQGVMTVTSEALKSLDPYIRPVNFS-SEEELNNTQDTGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATFMYEPIITLNQAVLATYTPEQKAELYKSCPTEVYETDENYDQFTVGDSMRCMYCDECVKVADSFKDNPEDDAAVSVRMREDKFIFSVETTGQLRPEEVVICALDLIREKLSSLKHQCLELSQD 307
BLAST of mRNA_P-fluviatile_contig67.13294.1 vs. uniprot
Match: A0A067CJB5_SAPPC (RNA polymerase Rpb3/Rpb11 dimeriZation domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CJB5_SAPPC) HSP 1 Score: 293 bits (750), Expect = 1.420e-90 Identity = 160/321 (49.84%), Postives = 217/321 (67.60%), Query Frame = 1
Query: 1 MPNLRAPQQVEIVDLREDYVEFILSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLAAEPG-----HHYEYNYDCDCEDYCHKCSAVFTLDVSWDKKSLGRPEHMQDQPVLVTSADLIGDDPNLRPVHFAPSDQNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQREEFVEICPAKVFGRDEKSGTIIVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPREDRFIFSVETNGSVTAEEVVVTALKVISEKLLNLRNDLMRMGDDQ 948
MP+ R P+ ++I +LR+D+++F LS TDTSVAN++RRVMIAEVPT+AIDLV+I N+SV+ DEFLAHRLG+IPLA + G + Y+ DCDC+++C CS F LDV + MQ VTS L DP + PVHF+ S++ + +QD+G++IAKL GQR++L A+AK GI KEHAKWSPVAVATY FEPII +N++ + T EQR E + CP +VF D+ I VE CMYCD+CV LA++Y PEDD V + D+FIFSVET G + EEVV+ AL +I +KL +L++ + + D+
Sbjct: 1 MPHPRFPK-IDIQELRDDFIKFELSETDTSVANSIRRVMIAEVPTLAIDLVSIEINTSVITDEFLAHRLGMIPLAFDGGLEGFKKRFVYSADCDCDEHCPHCSVEFELDVRAESG-------MQ----TVTSQSLRSLDPYVHPVHFS-SEEELNNTQDSGVIIAKLGPGQRLKLNALAKLGIGKEHAKWSPVAVATYMFEPIITLNQKVLSTYTNEQRVELYKSCPTRVFEIDDTYDQIQVEDHMRCMYCDECVKLAESYLENPEDDAAVTVTMTPDKFIFSVETTGQLKPEEVVICALDIIKDKLSSLKHQCLELSQDE 308
BLAST of mRNA_P-fluviatile_contig67.13294.1 vs. uniprot
Match: A0A024G378_9STRA (RPOLD domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024G378_9STRA) HSP 1 Score: 291 bits (745), Expect = 7.330e-90 Identity = 157/320 (49.06%), Postives = 214/320 (66.88%), Query Frame = 1
Query: 1 MPNLRAPQQVEIVDLREDYVEFILSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLAAEPG-----HHYEYNYDCDCEDYCHKCSAVFTLDVSWDKKSLGRPEHMQDQPVLVTSADLIGDDPNLRPVHFAPSDQNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQREEFVEICPAKVFGRDEKSGTIIVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPREDRFIFSVETNGSVTAEEVVVTALKVISEKLLNLRNDLMRMGDD 945
MPN + P+ VEI+DLR+D+++F L TD SVANALRRVMIAEVPT+AIDLVTI N+SV+ DEFLAHRLG+IPL + G + Y+ DCDCE++C CS F LDV ++ L VTS L DP +RPV+F+ S++ + +QD G++IAKL GQ ++L+A+AK GI KEHAKWSPVAVAT+ +EP I +N+ + TPEQ+ E + CP +V+ DE + + CMYCD+CV +A +YK PEDD V ++ +ED+FIFSVET G + EEVV+ AL +I EKL L++ + + +
Sbjct: 1 MPNPQFPK-VEILDLRDDFIKFELFETDASVANALRRVMIAEVPTLAIDLVTIEINTSVMTDEFLAHRLGMIPLFFDGGLEAFRQRFVYSQDCDCEEHCPNCSVEFQLDVRAEQGMLS-----------VTSDALKSVDPYIRPVNFS-SEEEFNNTQDTGVIIAKLGPGQHIRLSAIAKLGIGKEHAKWSPVAVATFMYEPKITLNQAILSTYTPEQKAELYKSCPTEVYETDENYEQFTIANHMRCMYCDECVKVANSYKDNPEDDAAVTVQMQEDKFIFSVETTGQLKPEEVVICALDMIREKLSYLKHQCLELSQE 307
BLAST of mRNA_P-fluviatile_contig67.13294.1 vs. uniprot
Match: A0A484DTY5_BRELC (RPOLD domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DTY5_BRELC) HSP 1 Score: 299 bits (765), Expect = 1.120e-89 Identity = 161/320 (50.31%), Postives = 217/320 (67.81%), Query Frame = 1
Query: 1 MPNLRAPQQVEIVDLREDYVEFILSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLAAEPG-----HHYEYNYDCDCEDYCHKCSAVFTLDVSWDKKSLGRPEHMQDQPVLVTSADLIGDDPNLRPVHFAPSDQNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQREEFVEICPAKVFGRDEKSGTIIVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPREDRFIFSVETNGSVTAEEVVVTALKVISEKLLNLRNDLMRMGDD 945
MP+ R P+ +EI +LR+D++ F LS TD SVANA+RRVMIAEVPT+AIDLV+I N+SV+ DEFLAHRLG+IPL + G + Y+ DCDC++ C CS F+LDV+ D L VTS L DP +RPV+F+ S++ + +QD+G++IAKL GQR++L+A+AK GI KEHAKWSPVAVATY ++PII +N+ + TPEQ+ E + CP +VF DE + V CMYCD+CV LA ++K PEDD V I+ RED+FIFSVET G + EEVV+ AL +I EKL +L++ + + D
Sbjct: 245 MPHPRFPK-IEIQELRDDFIRFELSETDPSVANAIRRVMIAEVPTLAIDLVSIEINTSVMTDEFLAHRLGMIPLNFDGGLENFRQRFVYSQDCDCDENCPNCSVEFSLDVTADSGVLS-----------VTSEALKSSDPYIRPVNFS-SEEELNNTQDSGVIIAKLGPGQRLRLSAIAKLGIGKEHAKWSPVAVATYMYDPIITLNQAVLSSYTPEQKAELYKSCPTEVFETDENYEQLTVGDPMRCMYCDECVKLADSFKDNPEDDSAVSIKMREDKFIFSVETTGQLKPEEVVICALDLIREKLSSLKHQCLELSQD 551
BLAST of mRNA_P-fluviatile_contig67.13294.1 vs. uniprot
Match: A0A7S3M8K8_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M8K8_9STRA) HSP 1 Score: 276 bits (707), Expect = 4.620e-84 Identity = 137/312 (43.91%), Postives = 211/312 (67.63%), Query Frame = 1
Query: 1 MPNLRAPQQVEIVDLREDYVEFILSNTDTSVANALRRVMIAEVPTMAIDLVTIHDNSSVLQDEFLAHRLGLIPLAAEPGHH---YEYNYDCDCEDYCHKCSAVFTLDVSWDKKSLGRPEHMQDQPVLVTSADLIGDDPNLRPVHFAPSDQNSDISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIEINEEKEALLTPEQREEFVEICPAKVFGRDEKSGTIIVEHRDMCMYCDDCVYLAKTYKARPEDDPVVKIRPREDRFIFSVETNGSVTAEEVVVTALKVISEKLLNLRNDL 927
MP RAP V++++LR+DY+ F L++TD S+ANALRR+M+AE P + IDLV DN++VLQDEF+AHRLGLIPL A + Y+++CDC++YC KCSA FT+D ++ P H Q+ + +T+ DLI +++PVHF+ + Q D S+D GIV+ KL GQR++L A+AKKGI KEHAKW+PVA K + ++ +NE+ + EQ+E V+ CP +VF DE + T+ V++ C++C +C++ + ++ PED V+++ +++FIF+VET G++ A+EVV AL ++ K+ L+ L
Sbjct: 17 MPFNRAPN-VKVIELRDDYINFELTDTDISMANALRRIMMAETPILCIDLVEFEDNTTVLQDEFIAHRLGLIPLRATRDGGMAAWNYHFECDCDNYCQKCSATFTIDCDFNDIVSRLPMHQQEVAISITTRDLISLSDDVQPVHFSNT-QEEDRSRDKGIVLVKLGPGQRLKLKAIAKKGIGKEHAKWNPVATVALKHDAVVTLNEDILDQYSEEQKEALVDCCPTQVFDYDENTKTVSVKNPSACIFCKECLFTTEDFRKNPEDKLAVQVKHSKEKFIFTVETTGALHAKEVVKDALAQLNAKIFRLQEIL 326
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 445.7 |
| Seed ortholog evalue | 1.9e-122 |
| Seed eggNOG ortholog | 2880.D7FHB9 |
| Preferred name | POLR2C |
| KEGG rclass | RC02795 |
| KEGG ko | ko:K01366,ko:K03011,ko:K07441,ko:K13457 |
| KEGG Reaction | R00435,R00441,R00442,R00443,R05970 |
| KEGG Pathway | ko00230,ko00240,ko00510,ko00513,ko01100,ko03020,ko04142,ko04210,ko04626,ko05016,ko05169,map00230,map00240,map00510,map00513,map01100,map03020,map04142,map04210,map04626,map05016,map05169 |
| KEGG Module | M00055,M00180 |
| GOs | GO:0000228,GO:0000375,GO:0000377,GO:0000398,GO:0000418,GO:0000419,GO:0000428,GO:0000785,GO:0000790,GO:0003002,GO:0003674,GO:0003824,GO:0003899,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005665,GO:0005694,GO:0005700,GO:0005703,GO:0005730,GO:0005737,GO:0005829,GO:0005856,GO:0006139,GO:0006259,GO:0006281,GO:0006283,GO:0006289,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006366,GO:0006367,GO:0006368,GO:0006369,GO:0006370,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007389,GO:0008150,GO:0008152,GO:0008380,GO:0008543,GO:0009058,GO:0009059,GO:0009266,GO:0009301,GO:0009408,GO:0009452,GO:0009628,GO:0009719,GO:0009791,GO:0009888,GO:0009987,GO:0010033,GO:0010374,GO:0010375,GO:0010467,GO:0010468,GO:0015630,GO:0016070,GO:0016071,GO:0016073,GO:0016591,GO:0016740,GO:0016772,GO:0016779,GO:0018130,GO:0019222,GO:0019438,GO:0023052,GO:0030880,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0033554,GO:0034062,GO:0034605,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036260,GO:0042221,GO:0042795,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044344,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044454,GO:0044464,GO:0046483,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0055029,GO:0060147,GO:0060255,GO:0060964,GO:0060966,GO:0060968,GO:0061695,GO:0065007,GO:0070013,GO:0070848,GO:0070887,GO:0071310,GO:0071363,GO:0071495,GO:0071704,GO:0071774,GO:0090304,GO:0090558,GO:0097659,GO:0097747,GO:0098687,GO:0098781,GO:0140098,GO:1901360,GO:1901362,GO:1901576,GO:1902494,GO:1990234 |
| EggNOG free text desc. | DNA-directed 5'-3' RNA polymerase activity |
| EggNOG OGs | COG0202@1,KOG1522@2759 |
| EC | 2.4.1.141,3.4.22.16 |
| COG Functional cat. | K |
| CAZy | GT1 |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | br01611,ko00000,ko00001,ko00002,ko01000,ko01002,ko01003,ko03021,ko03400 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | DNA-directed RNA polymerase, RBP11-like dimerisation domain |
| Ec32 ortholog | Ec-03_004030.1 |
| Exons | 10 |
| Model size | 1969 |
| Cds size | 969 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817085.868217-UTR-P-fluviatile_contig67:654507..655507 | 1622817085.868217-UTR-P-fluviatile_contig67:654507..655507 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig67 654508..655507 - |
| 1693571065.633841-UTR-P-fluviatile_contig67:654507..655507 | 1693571065.633841-UTR-P-fluviatile_contig67:654507..655507 | Porterinema fluviatile SAG_2381 | UTR | P-fluviatile_contig67 654508..655507 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622817085.878797-CDS-P-fluviatile_contig67:655507..655588 | 1622817085.878797-CDS-P-fluviatile_contig67:655507..655588 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 655508..655588 - |
| 1693571065.6500463-CDS-P-fluviatile_contig67:655507..655588 | 1693571065.6500463-CDS-P-fluviatile_contig67:655507..655588 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 655508..655588 - |
| 1622817085.889294-CDS-P-fluviatile_contig67:656073..656126 | 1622817085.889294-CDS-P-fluviatile_contig67:656073..656126 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 656074..656126 - |
| 1693571065.6577435-CDS-P-fluviatile_contig67:656073..656126 | 1693571065.6577435-CDS-P-fluviatile_contig67:656073..656126 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 656074..656126 - |
| 1622817085.8990667-CDS-P-fluviatile_contig67:656815..656918 | 1622817085.8990667-CDS-P-fluviatile_contig67:656815..656918 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 656816..656918 - |
| 1693571065.6658695-CDS-P-fluviatile_contig67:656815..656918 | 1693571065.6658695-CDS-P-fluviatile_contig67:656815..656918 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 656816..656918 - |
| 1622817085.9084826-CDS-P-fluviatile_contig67:657543..657603 | 1622817085.9084826-CDS-P-fluviatile_contig67:657543..657603 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 657544..657603 - |
| 1693571065.6742206-CDS-P-fluviatile_contig67:657543..657603 | 1693571065.6742206-CDS-P-fluviatile_contig67:657543..657603 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 657544..657603 - |
| 1622817085.9176831-CDS-P-fluviatile_contig67:658306..658485 | 1622817085.9176831-CDS-P-fluviatile_contig67:658306..658485 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 658307..658485 - |
| 1693571065.6917515-CDS-P-fluviatile_contig67:658306..658485 | 1693571065.6917515-CDS-P-fluviatile_contig67:658306..658485 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 658307..658485 - |
| 1622817085.929047-CDS-P-fluviatile_contig67:659354..659448 | 1622817085.929047-CDS-P-fluviatile_contig67:659354..659448 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 659355..659448 - |
| 1693571065.7063496-CDS-P-fluviatile_contig67:659354..659448 | 1693571065.7063496-CDS-P-fluviatile_contig67:659354..659448 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 659355..659448 - |
| 1622817085.9391363-CDS-P-fluviatile_contig67:660663..660804 | 1622817085.9391363-CDS-P-fluviatile_contig67:660663..660804 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 660664..660804 - |
| 1693571065.7229156-CDS-P-fluviatile_contig67:660663..660804 | 1693571065.7229156-CDS-P-fluviatile_contig67:660663..660804 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 660664..660804 - |
| 1622817085.95153-CDS-P-fluviatile_contig67:661480..661612 | 1622817085.95153-CDS-P-fluviatile_contig67:661480..661612 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 661481..661612 - |
| 1693571065.731117-CDS-P-fluviatile_contig67:661480..661612 | 1693571065.731117-CDS-P-fluviatile_contig67:661480..661612 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 661481..661612 - |
| 1622817085.9652803-CDS-P-fluviatile_contig67:662184..662286 | 1622817085.9652803-CDS-P-fluviatile_contig67:662184..662286 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 662185..662286 - |
| 1693571065.739472-CDS-P-fluviatile_contig67:662184..662286 | 1693571065.739472-CDS-P-fluviatile_contig67:662184..662286 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 662185..662286 - |
| 1622817085.9758584-CDS-P-fluviatile_contig67:663529..663553 | 1622817085.9758584-CDS-P-fluviatile_contig67:663529..663553 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 663530..663553 - |
| 1693571065.7521648-CDS-P-fluviatile_contig67:663529..663553 | 1693571065.7521648-CDS-P-fluviatile_contig67:663529..663553 | Porterinema fluviatile SAG_2381 | CDS | P-fluviatile_contig67 663530..663553 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig67.13294.1 >prot_P-fluviatile_contig67.13294.1 ID=prot_P-fluviatile_contig67.13294.1|Name=mRNA_P-fluviatile_contig67.13294.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=323bp
MPNLRAPQQVEIVDLREDYVEFILSNTDTSVANALRRVMIAEVPTMAIDL VTIHDNSSVLQDEFLAHRLGLIPLAAEPGHHYEYNYDCDCEDYCHKCSAV FTLDVSWDKKSLGRPEHMQDQPVLVTSADLIGDDPNLRPVHFAPSDQNSD ISQDAGIVIAKLAKGQRMQLTAVAKKGIAKEHAKWSPVAVATYKFEPIIE INEEKEALLTPEQREEFVEICPAKVFGRDEKSGTIIVEHRDMCMYCDDCV YLAKTYKARPEDDPVVKIRPREDRFIFSVETNGSVTAEEVVVTALKVISE KLLNLRNDLMRMGDDQPWKQGE* back to topmRNA from alignment at P-fluviatile_contig67:654508..663553- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_P-fluviatile_contig67.13294.1 ID=mRNA_P-fluviatile_contig67.13294.1|Name=mRNA_P-fluviatile_contig67.13294.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=9046bp|location=Sequence derived from alignment at P-fluviatile_contig67:654508..663553- (Porterinema fluviatile SAG_2381) ATGCCGAATCTACGTGCCCCTCAGGTCTGCTCGTCCTTGTTTCCGTGGAA
AGTTAGCCTTGCGAGCGTGGATCACAGATTGATCGCCCGTCTCTGCCTTT
GTCGCACATGGGGCTTGTTCGTGCTGGTTGGGATACTGGACGGCAAAGTC
GATAGAGAGTGTAGCTTGCCGCAGATCCAGCGCCTTCCTTGTTTCCTTGC
AGCATCCATAACTTTCATCATTGTGCCAATACTTTCGTGGCGGCGGTTGG
CAGCAGCAGGGACTTTTTGTGCGCGCTTGCTTAGTGGCCCGATCCCGATC
CATCATTCTTTACTGCCGCCGTGAGACTTCCTGCACGCCCCCGCCTCTCG
ATCACAACCCAAGTGGCGGCGAGACGATCATGTGCCCTTTATTGGGCGTT
TTCGTACCTTACTGATGTATGGTGTTTATCTCGGTCGGCTTCGTGGCATT
TCTGTGTGCAAACGCTCTTGCGTGACCTGCGTTATTCGGGCAAGGCGGGA
GAGTACACAGGGTACGGGGATAGCAGCAGACGGGCCGTACGTTGATCTCC
AGCGCTCCAGCAGTGAGATGCAGGCCAAATCTCAATCAACACTAGCGCTT
TTGTCAGCGTATCTGTCAATACCATACGGCTTATTGTTCAGTGAAGTATA
TAAGCGCACATGACTTTTGTGCGCGAAGTTCATATCACCCACTGCTAGTA
GGTTGAGCGAGCGCTTCAAAACGAAGATGCAGGGCACTTTCCTGTCGATC
AACTCTTGCCTACGAGCTGCTCTCAAAAGCGCAAGACTAATTATCCAAAT
CTAGGGCGGAAACACAATAGCCACTGTACGCGGAATCACAACATGTTTTG
ATATTTGCTCCGAATCCCCCCGACTGTGTCACGCTCCTCTTCGGATTCTT
GGTGTGCTGCATCATGCTGTTCAACATAACCTCTATTTACATCACGTTAG
TGTGGTCGGTCTTGTGATGCTGTACCACGCCGCCCGCCCTCCGTTTGCAG
AAGTTCTGATCCCGAGAAAGTCGCGCCTGTTTTGAGTGTTTTTGTGTACA
GCTTACTCGGTCAAGGTATCTTAGCTGGCCGGCCGATCATACGCACACGA
AGGCCGATGGGCCATCAAGTGGCAGCTCGGGGAAGGAGCAAAGGAAGGAC
AGGGAGGCCTATGGGTTAAGCGGCGGGTTTTATCATGAATACAAGTATGC
ACGTTCCACCGCCCCTTCCCCCCGCGGCGCCCTCGCGGTCTGTCGGTAAC
TCGCCGTTCGGTCGTAGCAGGTGGAGATCGTGGACTTGAGGGAGGACTAC
GTGGAGTTCATCTTGTCGAACACGGACACCTCGGTCGCAAATGCCCTGAG
ACGAGTCATGATCGCGGAGGTGAGAGGATGAGGTCGTCCGCTTGATTGAT
TCGTTTATGGACGCGATCTTGTCTTATGTTGGTGCTCGTGGCCGTTTTTG
GATGCCCACGCGCACGTCGTTGAGCAAACTTCGAGCCCGTTCCAAAGCCC
CCCTCCATTGCGCGGAACTCAGGCACACCCGCAGCTTCCCTCATCAACAA
CACCTTCCAATAACCGCACTCTGCCATGTTGGGACTTTTGTCGCTTTCAA
ACGGGGCCACTGCTTGCACGTCCGAATATCAACCTTCTGCTGCAGGCCCA
GAGCACAAGTTTCAAGTTTCCCCATTCATTTCGGAACAGTTGATTTTCAT
TCCCAGACGGTGTGGGCTATCATCAATGTTAGAGCCCGACCCGCCGACGT
GATGATAGCTGTCTCGAACAGGATACAACACGATTATGATACCAAACACG
GCGGCATCTCTGGACCAGCACACCCTTGCTTTGTTGTTGTTGTTGTCGAT
GTCGTTGCTGTCGTTGCTGTTGTTGATGATGTTGATGTTGTTGTTGTTGC
TGTTGTTTGTTGTCCCGCGACCTTCCTTCCACCCCTGCCAGGTACCTACC
ATGGCGATCGACCTGGTGACCATCCACGACAATTCCAGCGTCCTTCAGGA
CGAATTTCTCGCGCACCGCCTCGGCCTCATCCCACTGGCGGCAGAGCCCG
GGCACCATTACGAGTACAATTACGTGAGAACGGCTTGTATGTACGACTTC
TGCTTCAGGACTGAATAGAATGCCCCAGAGCAACCACCAAGTGTCAAGGG
GCATATTGTGTCTGCTTTTGGATATCGACGAGCCTGAGTGTGGCTTGTTT
GAAAGCAGAAACCGTAGTGCAGGAGCACGAAGCTGGGACTAGTTCAATAT
GGCAGAATGTCTGCACATCGATTGGTCCCCCTTGGTTGGCATAAGAACTT
ATCGGGAACGGCGCCTTGTCTTGTAAGGGAATGCATGGCCATTGCCAGGC
ACCATTCGCCCCCTCCTCCTTCCATGGGGGTCCCCTGGGGGGCGGGCAAG
GGGGTTCGAGGGTTCGCAATGTAGTTCATATCGCAACGTGCAAGAGACGA
AAGTTGTTGGCGGGCGTGTTTTTGAACACATTTCTTGGATGAGCGAACGA
ACACGATGGCATCAACTGCAGTGGCGCACTGACTGGTGCTAAGCACACGA
CGGCATCCACGGTTGTTCATGATAAGCCACAAGGACGAAGATGAAGTGGC
GGTCCCCAAAAATGTGCCCAAAAGGTTGACATAAGAAAGTCGCACATAAT
ACTATCGTCCCTTTTGGCCGCAATGCCCCCGCTGCTGTGGTTGCTGCTGT
GTCGCGTGTGGATCTGCCCGCGGTGGGTGCCCGTCCGTCGCTCGCACAGG
ACTGCGACTGCGAGGACTACTGCCACAAGTGCTCGGCCGTGTTCACGCTG
GACGTGTCCTGGGACAAGAAGAGCTTGGGCAGGCCGGAGCACATGCAGGA
CCAGCCGGTGCTCGTTACGTCCGCGGACCTGATCGGCGACGTGAGTTTGA
ACTTGTTTGCTGGGGCAGAGCGGCGTTGCAGCTGCTGCTGCTCTTCGTTG
TGCTGGGTGTCGTTGTTTCTGCCTGGTGCTGTTGCTGGCAATCTTGCTGG
TGCTCTTGTTGTTGTTATTGTTGTTATTGTTGTTGTTGTTGTTATTGTTG
TTGTAGGTGGTGGTGGTGGTGGTGGTGGTGGTGGCGGCAGCGCTGCTGTT
GTCGTTGTGTTGTTTTTGTCGGTGCTGTTGTCGGTATCGCTGTTGTATTT
TCACTCAGTTTTCTATCGGGATATGCGGCGCACGTGGTCATGAAGCCTGC
TACAAATATGCAAACACCAATGCCCACACATCCATACCCACGGTCAGACA
CGAGGCCCCGCATCACATTATTTTTGTGCGTATACTTGCTCGGATACACA
CCTGCCGACCAGCTCTACTCCTTTGTCTCCTTTGCGGTGGATATGATACG
AACGTAGGTTGTGATTGCCTTACCAATGTTGTTGTAGGTGGTGGTGGTGG
TGGTGGCGGCGGCGGCGGCGGCGCTCCTGTTGTGTTGTGCTGTTGTCGGT
GCTGTTGTCGGTATCGCTGTTGTATTTTCACTCAGTTTTCTATCGGGATA
TGCAGCACTCGTGGTCATGAAGCCTGCTACAAATATGCAAACACCAATTC
CCCCACATCCATACCCACGGTCAGAGACACGACGCCCCGCATCACATTTT
TTTTGTGCGTATGCTTGCTCGGATACACAACTGCCGGCCGGCTCTACTCC
TTTGTCTCCTTTGCGGTGGATATGATACGAACGTAGGATATGAATGTCGG
CGGCTGGTCTTTCGTGCGTGCGAAGCGGGCGTAACGCGCTCTGAGCTGCT
TGGCGTGTTCAACGCGCGTGAATCGCCCAGTACGATTGCACCATAGCCCA
CCCGTTGCCAGCCGTCGACCACTACCTCATCGGTCCGTTGTCTTTCCAGC
TCTCGCCGTGCGATTGGTTGGAGGCGATAGGGGGGGAACGGAGTCTCGAT
CTACCGGCGGTGCCTTGCACTGCTGACCACAGCAGAGAACCAAGTGTGTC
GCAATTTTTCATTGCCTTTCGCGTGTTTTTTTTTTTTTTTTTTTCTATGG
GCTTCGCTCGCCCCTCGCCCACAGTCTTCGCCGTCATCTTTGTCGTGTTA
CTCTCGCCGCTGCTGCTGCTTCTGCTGCTGCTGTTACCGTGTCATTGTTG
CACAGGACCCTAACTTGAGGCCGGTGCATTTTGCACCGTCGGATCAGAAC
AGTGACATCTCCCAGGACGCAGGCATCGTTATCGCCAAATTGGCCAAAGG
TGTCATCTGAGTCATGCTCATTTTTGCGAACAGCAAACAACAAACTCGGG
TTAAAAAAACGCCCCTTTGCCCACGCAATTTCTAAATTTCCTGGTGGTTT
GGTTGCTCGTGAAACATGGAAGATCTCCGACGCCCCGGGGGGGGCTGTTA
GGAATGCTCCCAAACCGGGGTAACATGAGGGCGTTTGTGGGTCAACTTAA
ACGCACGCATGCCGTCAGGCTTGTTATCCGCATTCTGCGTTGAGGGTCGA
GGAGCGTTCAACCATGGTTTCAGCCTGAAGAGCATACGTGAGAATATTTG
ACAACCTCAAGCGAGAGAGGGCCGTTCTTGTCGCCTGCTTTCGTATCTTA
ACCTGAGCGTAAGTGACAAGTGCGACTTACTGCATCCGTGATATTTTCGC
CAAGCGCACAAGAGTGGAAAACAAGCATCAGCTGGAAGGCACTTTGCTGC
ACGCCGCGTGCCTTCGCCTGCAACCATTCTGTCGCCTCTCGATCTCGGGG
AAGTCGTCGCCTGGAGGCTTTAGACAGGAATGGCTGGGCATGAATCGGGC
GCGTTCCTCCTTCTCGGCTGTTTGCAGATAGTTTTTGTCGACTGTAATGG
TTTTATCGAGTTGCCGTCGGGGATAGCGGAAGCCAGCCGTACCTCGCTCT
CTCATGGGCCAGTGGAGATCCTAAGGCTGCGTACTTTCCGGGTTAACGTT
GTCGGAGAGGTCATTATGACAAAAAAGCGGCAGCGTCCAACACCGATAGC
AGCGGGGGACAAGCCGACACGCGGCGGCGGCGCTTTTTCGCCCCATTGCC
CCCCCCGCTCATGCAGCTGCCGCCTCTTCTGGCGCTATTTCCGCCGCTGC
TGCTGTTTGCTGCTGCAGGTCAGCGCATGCAGCTGACCGCGGTGGCCAAG
AAGGGCATCGCGAAGGAACACGCCAAGTGGTCCCCCGTGGCGGTGGCGAC
CTACAAGTTCGAGCCCATTATCGAGATCAACGAGGAGAAGGAGGCACTAC
TCACGCCCGAGCAACGGGAGGAGTTCGTAGAGATATGTCCAGCGAAGGTG
GGTGTGCAGCTATGGATCTGCAGCCGCCCTGCAGCAGTTTATCTGGCCAT
GTGTTCATTCACACTGAAAGCAATATGCTGCGCGCCGGAGAGAGAATAAA
CGTTCGGGTTAATACTTCGAAGTAGTAGGTGTTCGTGCGTCGAAGCCAGG
GACATATGCGTTACCTAGCCAGATGTTTCCGCTACAAACGAATTTCGCTG
CTGGTCGGAGCATATTTGGCGGGGTGATTTAGAGTTACCGCCGGAAAAGA
TTGCGCCGTTATCTGCTTTCCCCCCTCGGCATGTGCGTGTTTTGCTGGAC
AGAAATGTGTCACACACACGGATGAGAAAGGAGAGGAGATCGCGAGGACG
TGTCCTTTGGTCACCACCGGTCGGTAGCTCTAGTGTATCCCGCTCCCGTG
CGCCAACGAACAAAAAATAATCGCAATGGTGTTGTCATTTTCATGCATTC
AACCCTTTGCGCCTAAGGACTAACCTGTCCGGTCTGCCCATCCCACTCTT
GCGCCCCAGAACGAACCGGGTATTGCGTACATGCTCGGTCAGAGCGAATC
TCGAAACAGCTTGCTGCATGTGCGTTTTTTTTTATGGGGGGGCGGGCGGG
CTGATTTTCATCCTCCTCCCTGAGCCTCGCGCTGTTTATCCCAGATAATA
TATTGGTCCTCCGTCCGCAATATGTGCTCGTTGACTCCTCCGCGGAATAG
GTGTTCGGGAGAGACGAGAAGAGCGGGACCATCATCGTCGAGCACCGAGA
TATGTGCATGGCGAGTGGTGGGGGCACGATAGCTCGGATCGAAAAGTGGG
CGGTAGGGGGGGAGCAAGCTGGGGGGAAGGATGCGTTGCTTGTCGTTCAT
GTTTATGTTATTTGTCACCACAGCGCCCGACATTTACCCCCGTACTGAAT
CGTCTTTGGTGGTGGGTTCTTGGTTTGGTTTCTTGTGGCTCCAACTGCTT
GTCCTCTTGCTTGTGAAAGAGTGCGTGCGTGTGTGCGTGTGTGCGGGCAT
CATCGCTGGCTCAACCCGGAACCGCCAATGTGTGTGCATGTGGGTGATAC
GTGTGTGTACGTCTTTCTTTTTCTTGTTTCGCTTGCATGTGTCTCGTGTT
TTCTCGTGTTGTTGGTTTTCGTGTGGGGCATGTTCTACTCTTGAACGTCG
TTTTTGTTTTACTTGACTTATTGTTGTACTCCTTATTTTCTTCGTGGAAA
GTGCCAGCTTTCGCTCTCTCGACTTGCCTCTCTCCGCATCCGCTCTGCCC
CCCCCCCATCCCCCGTCCCCGGCCCCCCGTCCCCGGCCCCGGCCCCCGTC
CCCTCCCTCCTCCCACTCCACGTCCCACATTTTGTTCCTCCCCACCTTTC
TATTTCCACCTCTGCCCCCTCTTCACGCTCATCAGTATTGCGACGACTGC
GTGTACCTGGCGAAGACATACAAGGCACGGCCAGAAGATGACCCCGTTGT
AAAGATCAGACCAAGGGAAGACCGCTTCATCTTTTCGGGTAAATAAAAGG
ACGGCGAGACGCCCCCTTTGCCTCTCCCGCGCCCGGAAAGAGCGCGCAAA
TGTTTGATGCTTCTACTAGCAGGAGTAGGAACGGTGCTCCGTCGCTAAAT
GGATGCGTGGTCAGTGGTGAAATAACTAAGGCAAGATGGGTGCTTCTGTT
AGGACTGTTCTCCATTGCGAGAGGGAACCGTGGTCAGTGGTCAAATGACC
CAGGGCAAGCAACAAATTAGTACGTCCCCTCACCCCACACACCACCGCGC
TCTTTGTAGGGAACTTCCCCATACAATTCTGCGATGTCTGACGGGATAAC
CACCTGCTCGCCGTCTGCTTTGACCCCCTCCCTGCCTCACGAGTGATGCT
CGGTTGCAGGCGATCGTATTGCTTGCCCGTGCACGGCGCGTGGCCTCCTC
TGTATGCGTTTCCTATCCGCGTAGCTGATGCTGAGCGCGATATTTTTATC
GTACCCGGCTTTGCGCGCCGTTGCTTTCCGGCCTTGCCCGCGTCCCGAAC
CCCCCTTACGAACTCCGCGTCCCCTCCGAACCACCTCTCGCGTTGAACTA
CCTTGTCCGTCCTCCCGGCGGAATTATTATTTGCTGCCCCGTCGTTGGGT
GCTTCCCACCGGCCGCGCATATGTCTGGGGCTGGGGGAAACATGTTATCT
CTGCGCCTGTCCGTCTGTATCTCGCAGTGGAGACGAACGGATCAGTGACT
GCCGAGGAGGTCGTCGTCACGGCCCTCAAGGCGAGTGTGCTTCAGCTCTC
TCTCTCTCTGTATGTTCCAGCATGCGAGCAGTTTGAGAGGGGGAGCGTCG
AAGCCCACTGTTGCGCAGCATGCCGGAAATTTGAGAGGGGAAACACCGAA
TCTTGGCATGCGAGGAATACGAGAGGGGAAATGTCGGAGCCCACTGTTTC
TCGGCATGCGAGCAATTCGAGTCGGAGCCCACAGCCTGTCTCCCAGTATG
CGGGAAATTCGAGAGGAGTAAAGTTGGAGCCCATAGGCTCTCCAATTTAG
ACAAAGCTCGAACATTTTATATGCATGAAAGTGGCGGCTTCAAAATAGAG
TAAACGGTCACCAACCATGGGGGGAACGATCAACAAGGAACGACTTGACT
TGATAGCTTACCTTGTACCTCGTGATCTACGCCTGACGCTCATGAAACGT
GGTCTGCAGCGCAGGGCTCATGTACCGCTGTGATCCTGCCGTTTGCGCCC
TCCCTTTCACAACAGGTGATATCGGAGAAGCTGCTGAACCTGAGAAACGA
CCTTATGAGAATGGGCGACGATCAGCCGTGGAAGCAGGGGGAATGAAGAT
AGATAAGGACGTCGCGTCTCCCAGGGATGTAGATATCTTGGGCATGTCCT
GAGGTTTACCCGTCGCATCTTCGACACGCCGCCCCCTAAGTATTCTGGTT
AATTAACCGGTTCATTTCCTACTGTTGCCGGCGGTTTTTTTAACAGTCGG
ATCTCGTGTTCAGGCGAAGGAATTCCTGGGTTTGACGCTTTTGACCTTTC
GTTCGAAGCGACCGGCAAATGAGTACAAACACATAGATGCTGAAGCGATG
AGAAGCGATAGCGATGCCATTCCAAGGCCCTGTGTGAATTGCTTCAATGT
GTCAGATGTCAAGGTCGTAGGTGTTGGTGTGTCCTCTGGCTGTTGGCGTG
TGAATGGGATAAAGACGCACTTACGGGAGGGCGGTTTGTATCGCGCTTGG
TCTGCGCCACAATCCGTGGGGGGAGAAGGTGCGGATCTCACCTATGCCGC
CAGCTGGTGCGGTCGACGCGGCCTAAACTCGGCATCAAAGTCGACGCACG
CACAGCGAGGCGGTTGGTCCCCGCCGTTTGTCCAACGGGGTTCACTTCGC
ACACAGATACACAGACCCGTTATTTTCGTACCGTTTTGGACAGGGTGGTG
AAGATGTTCGGACGTCTTGCACCCGCTTTCGCTGAAAATAATATGCGCGC
GCCTCAGAGATAGAAGGGGGGCGTGAAGGGAACATCAATATTTGTTTCGT
CGTACGTTATCGCTCTTGCTATAATAGTTCAATACTCCGGAGTATAGTCT
AGACTATACTTCGCGTCTCGTTTGTGCTTTTCCTGATTGATTTACTGGAA
CGGTATTTGGTTTCAGTTCCGTGGAGGAAGTTGCGGATGGTTAGGAGACA
TAGTCTAAGTCTGATCGGGGAATTTATGATGGTATGCATACGAGGAGTTG
GCATTACATTTGGTTGGAGTGAGCCATGTGTGAGGGCCACACGCACTCTC
AATTTATTAATCATTCATCAAGTAATTTTATCCCCGAGTCACACCT back to topCoding sequence (CDS) from alignment at P-fluviatile_contig67:654508..663553- >mRNA_P-fluviatile_contig67.13294.1 ID=mRNA_P-fluviatile_contig67.13294.1|Name=mRNA_P-fluviatile_contig67.13294.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1938bp|location=Sequence derived from alignment at P-fluviatile_contig67:654508..663553- (Porterinema fluviatile SAG_2381) ATGCCGAATCTACGTGCCCCTCAGATGCCGAATCTACGTGCCCCTCAGCA GGTGGAGATCGTGGACTTGAGGGAGGACTACGTGGAGTTCATCTTGTCGA ACACGGACACCTCGGTCGCAAATGCCCTGAGACGAGTCATGATCGCGGAG CAGGTGGAGATCGTGGACTTGAGGGAGGACTACGTGGAGTTCATCTTGTC GAACACGGACACCTCGGTCGCAAATGCCCTGAGACGAGTCATGATCGCGG AGGTACCTACCATGGCGATCGACCTGGTGACCATCCACGACAATTCCAGC GTCCTTCAGGACGAATTTCTCGCGCACCGCCTCGGCCTCATCCCACTGGC GGCAGAGCCCGGGCACCATTACGAGTACAATTACGTACCTACCATGGCGA TCGACCTGGTGACCATCCACGACAATTCCAGCGTCCTTCAGGACGAATTT CTCGCGCACCGCCTCGGCCTCATCCCACTGGCGGCAGAGCCCGGGCACCA TTACGAGTACAATTACGACTGCGACTGCGAGGACTACTGCCACAAGTGCT CGGCCGTGTTCACGCTGGACGTGTCCTGGGACAAGAAGAGCTTGGGCAGG CCGGAGCACATGCAGGACCAGCCGGTGCTCGTTACGTCCGCGGACCTGAT CGGCGACGACTGCGACTGCGAGGACTACTGCCACAAGTGCTCGGCCGTGT TCACGCTGGACGTGTCCTGGGACAAGAAGAGCTTGGGCAGGCCGGAGCAC ATGCAGGACCAGCCGGTGCTCGTTACGTCCGCGGACCTGATCGGCGACGA CCCTAACTTGAGGCCGGTGCATTTTGCACCGTCGGATCAGAACAGTGACA TCTCCCAGGACGCAGGCATCGTTATCGCCAAATTGGCCAAAGGACCCTAA CTTGAGGCCGGTGCATTTTGCACCGTCGGATCAGAACAGTGACATCTCCC AGGACGCAGGCATCGTTATCGCCAAATTGGCCAAAGGTCAGCGCATGCAG CTGACCGCGGTGGCCAAGAAGGGCATCGCGAAGGAACACGCCAAGTGGTC CCCCGTGGCGGTGGCGACCTACAAGTTCGAGCCCATTATCGAGATCAACG AGGAGAAGGAGGCACTACTCACGCCCGAGCAACGGGAGGAGTTCGTAGAG ATATGTCCAGCGAAGGTCAGCGCATGCAGCTGACCGCGGTGGCCAAGAAG GGCATCGCGAAGGAACACGCCAAGTGGTCCCCCGTGGCGGTGGCGACCTA CAAGTTCGAGCCCATTATCGAGATCAACGAGGAGAAGGAGGCACTACTCA CGCCCGAGCAACGGGAGGAGTTCGTAGAGATATGTCCAGCGAAGGTGTTC GGGAGAGACGAGAAGAGCGGGACCATCATCGTCGAGCACCGAGATATGTG CATGGTGTTCGGGAGAGACGAGAAGAGCGGGACCATCATCGTCGAGCACC GAGATATGTGCATGTATTGCGACGACTGCGTGTACCTGGCGAAGACATAC AAGGCACGGCCAGAAGATGACCCCGTTGTAAAGATCAGACCAAGGGAAGA CCGCTTCATCTTTTCGGTATTGCGACGACTGCGTGTACCTGGCGAAGACA TACAAGGCACGGCCAGAAGATGACCCCGTTGTAAAGATCAGACCAAGGGA AGACCGCTTCATCTTTTCGGTGGAGACGAACGGATCAGTGACTGCCGAGG AGGTCGTCGTCACGGCCCTCAAGTGGAGACGAACGGATCAGTGACTGCCG AGGAGGTCGTCGTCACGGCCCTCAAGGTGATATCGGAGAAGCTGCTGAAC CTGAGAAACGACCTTATGAGAATGGGCGACGATCAGCCGTGGAAGCAGGG GGAATGAGTGATATCGGAGAAGCTGCTGAACCTGAGAAACGACCTTATGA GAATGGGCGACGATCAGCCGTGGAAGCAGGGGGAATGA back to top
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