mRNA_P-fluviatile_contig67.13261.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig67.13261.1
Unique NamemRNA_P-fluviatile_contig67.13261.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig67.13261.1 vs. uniprot
Match: D7G4P7_ECTSI (DUF4168 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4P7_ECTSI)

HSP 1 Score: 248 bits (633), Expect = 1.200e-78
Identity = 143/201 (71.14%), Postives = 160/201 (79.60%), Query Frame = 1
Query:  478 AGNIIRSNGLSTNRYNELSHIMGKRKDLRERVQHQAYLYRVNADLRGDKIHPLVD----------LSETTPR--ADRRG--NKGQQDNKPRTGPP-DRKIMFAKSLREIEALRLRQRRRLMTEMGCDDLPSGLCRPSMDRIATNRIRKECQRFPVVAESIVKANGLKLED-RRLSARSRGNLLYRWQILRSVRKLEKLGGA 1032
            AGNIIRSNGL+TNRYN+LSHI+GKRKDLR RVQHQAYLYRVNADLRG KI PL D           + T+PR  A+RR   N+GQQ   PR GPP D+K++FAKSLREIEALR RQRRRLM E+G +DLPSGLCRP M RIA+ RIRKECQ FPV AESIVKANGL+ E+  RLSARSR N+LYRWQ+LR VRKLEK G A
Sbjct:    2 AGNIIRSNGLTTNRYNQLSHILGKRKDLRGRVQHQAYLYRVNADLRGTKIRPLPDPVVVGAEGDAAAPTSPRSKAERRRIVNRGQQVKTPRAGPPPDKKMLFAKSLREIEALRSRQRRRLMKEVGSNDLPSGLCRPEMGRIASPRIRKECQSFPVAAESIVKANGLEPEEFNRLSARSRANMLYRWQVLRCVRKLEKRGRA 202          
BLAST of mRNA_P-fluviatile_contig67.13261.1 vs. uniprot
Match: A0A835YJ45_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ45_9STRA)

HSP 1 Score: 230 bits (587), Expect = 3.590e-70
Identity = 127/262 (48.47%), Postives = 178/262 (67.94%), Query Frame = 1
Query:  253 VSLFGPEEKELDRYSAALAGTHFLRQERDRVIKDTTNPLAYLYLSITKPDQHNRWMSSPWISDKARQAQKSYLLQAGNIIRSNGLSTNRYNELSHIMGKRKDLRERVQHQAYLYRVNADLRGDKIHPLVDLSETTPRA-DRRGNKGQQDNK------PRTGPPDRKIMFAKSLREIEALRLRQRRRLMTEMGCDDLPSGLCRPSMDRIATNRIRKECQRFPVVAESIVKANGLKLED-RRLSARSRGNLLYRWQILRSVRKL 1014
            VSLF PEE ELDRY+AA+A T +LR+ERD +I++ TN LAY YL  TK DQ+ +WMSSP ++DK+R+AQ ++L+ AG II S  LS +R+N+L+ ++ + K L  RV  QAYLYRV A+L GDK  P+ DL E        RGN    D           G P +  +FAKSLRE+E+LR+ QRRRLM  +  D+LP GLC   M R+++  +R+ C++FP+ A ++V+ANGL+ E+  RL  R++ NL+YR+++LR V KL
Sbjct:   44 VSLFSPEEYELDRYAAAMAATEWLRRERDAIIRENTNALAYWYLKATKGDQYTKWMSSPLVTDKSRKAQHNFLMLAGRIITSCDLSISRFNQLTKLVAQDKQLASRVNRQAYLYRVGAELHGDKFLPVEDLREAAKGGRSGRGNGEFSDGANGLSAMALLGQPKKLRLFAKSLREVESLRMEQRRRLMETLEVDELPQGLCMTRMARVSSPIVRRACEQFPLQAAAVVRANGLRTEEFNRLLQRAQKNLVYRYRVLRLVHKL 305          
BLAST of mRNA_P-fluviatile_contig67.13261.1 vs. uniprot
Match: D7FRW6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRW6_ECTSI)

HSP 1 Score: 181 bits (460), Expect = 2.150e-51
Identity = 115/182 (63.19%), Postives = 127/182 (69.78%), Query Frame = 1
Query:    1 MVALLPVALALGLACCQRDLARE------RSAALDT--GGPGSTSASPVKARNAHSSGVSAAAEASAVG-----WFVRGGGHNGNCL--AVTEGAGAP---SVSLFGPEEKELDRYSAALAGTHFLRQERDRVIKDTTNPLAYLYLSITKPDQHNRWMSSPWISDKARQAQKSYLLQAGNII 492
            MV LLPV  AL LA  +RDLAR         AA D   G P S SASPVKA++  +S   A+A AS  G     WF RGGG +G  L    T  AGA    SVSLFGPEEKELDRYSAALA THFLRQERDRVIKDTT+PLA+LYLSITKP QHNRW+SSPWIS +ARQAQK YLLQA  ++
Sbjct:   86 MVGLLPVFFALALASSRRDLARRGRGSAATPAAADNTPGRPASMSASPVKAKDDANSTSQASASASLGGGAAFDWFTRGGGRHGFGLEGGRTRAAGAAAGQSVSLFGPEEKELDRYSAALAATHFLRQERDRVIKDTTSPLAHLYLSITKPGQHNRWISSPWISQEARQAQKDYLLQASLVL 267          
BLAST of mRNA_P-fluviatile_contig67.13261.1 vs. uniprot
Match: W7TRM5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRM5_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 9.600e-17
Identity = 74/239 (30.96%), Postives = 111/239 (46.44%), Query Frame = 1
Query:  283 LDRYSAALAGTHFLRQERDRVIKDTTNPLAYLYLSITKPDQHNRWMSSPWISDKARQAQKSYLLQAGNIIRSNGLSTNRYNELSHIMGKRKDLRERVQHQAYLYRVNAD--LRGDKIHPLVDLSETTPRADRRGNKGQQDNKPRTGPPDRKIMFAKSLREIEALRLRQRRRLMTEMGCDDLPSGLCRPSMDRIATNRIRKECQRFPVVAESIVKANGLKL-EDRRLSARSRGNLLYRWQ 990
            LDRY+AA+A T  LR++RDR ++D  NPL   ++  TK +      S P  ++  R+A   ++ Q+  II+S GLS   +N ++  +     LR++   +   +    +                            Q+   P    P R  +FAKSLREIEALR  Q   L  E   D LP G   PS+  I   +++  C RFPV AE I + NG +  E   L  ++  N  +RW+
Sbjct:   59 LDRYAAAVAATEPLREDRDRALRDNINPLHLWWVKTTKKNVLEAHKSGPR-AEAIRRACTYHVTQSSRIIKSLGLSVADFNLITRRLAHDAVLRKKASRRPKKWSGEGEEXXXXXXXXXXXXXXXXXXXXXXXXXXXQELPVPTNVLPHRLALFAKSLREIEALRAEQNHLLKQEFHVDALPPGATDPSLFPILNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKTEKNPFFRWR 296          
BLAST of mRNA_P-fluviatile_contig67.13261.1 vs. uniprot
Match: A0A7S3JPY0_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JPY0_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 6.410e-12
Identity = 70/282 (24.82%), Postives = 135/282 (47.87%), Query Frame = 1
Query:  268 PEEKELDRYSAALAGTHFLRQERDRVIKDTTNPLAYLYLSITKPDQHN----RWMSSPWISDKARQAQKSYLLQAGNIIRS-NGLSTNRYNELSHIMGKRKDLRERVQHQAYLYRVNADLRGDKIHPLVDLSETTPRADRRGNKGQQDNKPRT-GPPDRKIM------------------------FAKSLREIEALRLRQRRRLMTEMGCDDLPS-GLCRPSMDRIATNRIRKECQRFPVVAESIVKANGLKLED-RRLSARSRGNLLYRWQILRSVRKLE 1017
            P+E   DRY+ ALA T   R+ RD  +  +   + ++    ++  Q N    R ++S   S + R A   + +  G II + +GLS + +N +S  +    DL+++V HQAYLYR+ + +   K  P++  S+T       G+     +   T  PPD  ++                        FA   ++++ L+ +QR +L++ +  D+ P   +C   +    +  +R  C+ FP  AE++V++ G+      +L A+   + ++RW++ R +R+L+
Sbjct:   57 PDEVLYDRYALALAATERARELRDEALIHSVGRIRWMMRKWSRESQLNACDPRILASA--SPEWRTACARHSIVCGRIIDAVSGLSVSEFNTISRTVAGSPDLKQKVLHQAYLYRLASKI-DTKRDPIIAPSQTIG-----GSSDSTSSSTITRSPPDDTLLKAYNKQNPRGSTALDGATADSIKLFASLAKQVQHLQQQQRAQLVSTLKIDEFPDLPICDDRVLPFMSQEVRDLCRAFPAKAEALVRSYGVDYSSFEKLLAKVDSDPIFRWRLKRQMRQLD 330          
BLAST of mRNA_P-fluviatile_contig67.13261.1 vs. uniprot
Match: A0A7S3YJM1_HETAK (Hypothetical protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJM1_HETAK)

HSP 1 Score: 67.0 bits (162), Expect = 2.980e-9
Identity = 43/127 (33.86%), Postives = 67/127 (52.76%), Query Frame = 1
Query:  253 VSLFGPEEKELDRYSAALAGTHFLRQERDRVIKDTTNPLAYLYLSITKPDQHNRWM---------SSPWISDKARQAQ---KSYLLQAGNIIRSNGLSTNRYNELSHIMGKRKDLRERVQHQAYLYR 597
            V+LF PEEKE DRY+AA++    LR ERD+ +++T NP  + ++          +          + P      R+AQ    +YL+++  +I+S  L   R+N LS  +   +DL+ RV  QA LYR
Sbjct:   39 VTLFEPEEKEYDRYAAAISAIEPLRVERDQRVEETLNPFFFCWMKARWGGGSGLYARLLELAPEEAPPGAGPGLRRAQAACNAYLVKSSRVIQSLDLDVGRFNALSREVQASRDLKRRVTQQARLYR 165          
BLAST of mRNA_P-fluviatile_contig67.13261.1 vs. uniprot
Match: A0A4D9D076_9STRA (DUF4168 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D076_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 2.550e-8
Identity = 40/95 (42.11%), Postives = 52/95 (54.74%), Query Frame = 1
Query:  718 PDRKIMFAKSLREIEALRLRQRRRLMTEMGCDDLPSGLCRPSMDRIATNRIRKECQRFPVVAESIVKANGLKL-EDRRLSARSRGNLLYRWQILR 999
            P R  +FAKSLREIEALR  Q   L  E   D LP G   PS+  I   +++  C RFPV AE I + NG +  E   L  ++  N  +RW++ R
Sbjct:  276 PHRLALFAKSLREIEALRAEQNHLLKQEFHVDTLPPGATDPSLFPILNTKVQHLCLRFPVQAEEIAQKNGFETAEFNSLLLKAEKNPFFRWRVER 370          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig67.13261.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D7G4P7_ECTSI1.200e-7871.14DUF4168 domain-containing protein n=2 Tax=Ectocarp... [more]
A0A835YJ45_9STRA3.590e-7048.47Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FRW6_ECTSI2.150e-5163.19Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
W7TRM5_9STRA9.600e-1730.96Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A7S3JPY0_9STRA6.410e-1224.82Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3YJM1_HETAK2.980e-933.86Hypothetical protein (Fragment) n=2 Tax=Heterosigm... [more]
A0A4D9D076_9STRA2.550e-842.11DUF4168 domain-containing protein n=1 Tax=Nannochl... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig67contigP-fluviatile_contig67:114955..120060 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score252.3
Seed ortholog evalue3.3e-64
Seed eggNOG ortholog2880.D7G4P7
EggNOG free text desc.Domain of unknown function (DUF4168)
EggNOG OGs2E26C@1,2S9ES@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Exons7
Model size1035
Cds size1035
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817079.8449032-CDS-P-fluviatile_contig67:114954..1152331622817079.8449032-CDS-P-fluviatile_contig67:114954..115233Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 114955..115233 +
1693571049.752472-CDS-P-fluviatile_contig67:114954..1152331693571049.752472-CDS-P-fluviatile_contig67:114954..115233Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 114955..115233 +
1622817079.8553767-CDS-P-fluviatile_contig67:115993..1161011622817079.8553767-CDS-P-fluviatile_contig67:115993..116101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 115994..116101 +
1693571049.7670684-CDS-P-fluviatile_contig67:115993..1161011693571049.7670684-CDS-P-fluviatile_contig67:115993..116101Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 115994..116101 +
1622817079.8664446-CDS-P-fluviatile_contig67:116975..1170651622817079.8664446-CDS-P-fluviatile_contig67:116975..117065Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 116976..117065 +
1693571049.7781115-CDS-P-fluviatile_contig67:116975..1170651693571049.7781115-CDS-P-fluviatile_contig67:116975..117065Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 116976..117065 +
1622817079.878084-CDS-P-fluviatile_contig67:118121..1183371622817079.878084-CDS-P-fluviatile_contig67:118121..118337Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 118122..118337 +
1693571049.789091-CDS-P-fluviatile_contig67:118121..1183371693571049.789091-CDS-P-fluviatile_contig67:118121..118337Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 118122..118337 +
1622817079.8899055-CDS-P-fluviatile_contig67:119029..1191341622817079.8899055-CDS-P-fluviatile_contig67:119029..119134Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 119030..119134 +
1693571049.8004644-CDS-P-fluviatile_contig67:119029..1191341693571049.8004644-CDS-P-fluviatile_contig67:119029..119134Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 119030..119134 +
1622817079.9019203-CDS-P-fluviatile_contig67:119456..1195991622817079.9019203-CDS-P-fluviatile_contig67:119456..119599Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 119457..119599 +
1693571049.8090894-CDS-P-fluviatile_contig67:119456..1195991693571049.8090894-CDS-P-fluviatile_contig67:119456..119599Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 119457..119599 +
1622817079.9136188-CDS-P-fluviatile_contig67:119966..1200601622817079.9136188-CDS-P-fluviatile_contig67:119966..120060Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 119967..120060 +
1693571049.8174603-CDS-P-fluviatile_contig67:119966..1200601693571049.8174603-CDS-P-fluviatile_contig67:119966..120060Porterinema fluviatile SAG_2381CDSP-fluviatile_contig67 119967..120060 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig67.13261.1prot_P-fluviatile_contig67.13261.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig67 114955..120060 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig67.13261.1

>prot_P-fluviatile_contig67.13261.1 ID=prot_P-fluviatile_contig67.13261.1|Name=mRNA_P-fluviatile_contig67.13261.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=345bp
MVALLPVALALGLACCQRDLARERSAALDTGGPGSTSASPVKARNAHSSG
VSAAAEASAVGWFVRGGGHNGNCLAVTEGAGAPSVSLFGPEEKELDRYSA
ALAGTHFLRQERDRVIKDTTNPLAYLYLSITKPDQHNRWMSSPWISDKAR
QAQKSYLLQAGNIIRSNGLSTNRYNELSHIMGKRKDLRERVQHQAYLYRV
NADLRGDKIHPLVDLSETTPRADRRGNKGQQDNKPRTGPPDRKIMFAKSL
REIEALRLRQRRRLMTEMGCDDLPSGLCRPSMDRIATNRIRKECQRFPVV
AESIVKANGLKLEDRRLSARSRGNLLYRWQILRSVRKLEKLGGA*
back to top

mRNA from alignment at P-fluviatile_contig67:114955..120060+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig67.13261.1 ID=mRNA_P-fluviatile_contig67.13261.1|Name=mRNA_P-fluviatile_contig67.13261.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5106bp|location=Sequence derived from alignment at P-fluviatile_contig67:114955..120060+ (Porterinema fluviatile SAG_2381)
ATGGTGGCGCTCCTGCCGGTAGCCTTGGCTCTAGGGCTGGCATGCTGTCA ACGAGACTTAGCGAGAGAGAGGTCAGCAGCACTTGATACCGGAGGACCTG GTTCAACATCAGCATCGCCTGTCAAGGCGAGGAATGCGCACAGCTCTGGG GTATCGGCAGCAGCCGAAGCTTCGGCGGTTGGCTGGTTTGTTCGCGGAGG CGGGCATAATGGTAATTGCCTGGCTGTCACTGAGGGAGCAGGAGCGCCGT CGGTTTCTCTCTTCGGACCGGAGGAAAAGGTAAAAATTAGGTCACTGCCA AATTCTCATGCTCGAAGGCAGAAATACTCGAGCAAAGCCTTCGCCGGGGA GTAAGACGTGCAGTTGCCGACAACGCAGATAGCAATGGCTACAGCAACCG CAGCACGCACACAGCGGCAGCCGCGCCCAACCTTTGCTGATTCCCGCCAT GAGATACGCGCGTGCGCATTCGCACGCGGAAACACGAAGGAAGTGATTGC TTTATTCAGCATGACACGCCCACACGTTTGGACTTTAGTATTGAAAGCAC GTCCTGAAGGACGCGCCCGACCACCTTCATTGTTTTCTATTTTCCCCTCA AAAGCGCCGAGAGGTAAATTTCAAAGGTCTTTAGTACGACCGTAGACAGC TTCGCGGGCGGTATATTCTACTTCTGGAGGTAGTGCTTCATGATGCATAC CCCAAACTTTCCCCGGATAAATATGCGGAGTGTTGCACGTTGGATGAGCT TGACTGCTGCACCACGATGAAATGATGCAAGTACAACCCCGCATCGCCTT AGCATCTACTACGTATTACAGTATGTTCTATGACGGGGTTGGTAATTGTG CTACCACATTCCGTCAAAGTTGTTTCTCATACCATTTCGTTTATCAGAGA AGCAGGATCCCCAACCTCTGCACCCATTACTGTCTTGTGCCTGAAAAGTC CATTGCGCATTTCCCCTTCATGCGCTCTGCCCTCGCACATGTGTTGACCT TGCTCTGCTGTCGCTTGTGGTGCCACCTTATTTTGTTAGGAATTGGACCG ATATTCAGCGGCGTTGGCCGGGACACACTTCCTAAGGCAGGAGAGGGACA GAGTCATCAAAGACACCACCAACCCGTTGGCGTATTTGTATCTCAGCGTG AGTGGTCTTGCCCCCTTCCTCTGTACAAATATACGGGACAGGGTGCCGAT GAAAAAAAAAAAAAAAAAAATGCTCCTGCTGGCGTAAATTACATTACCCC ACATCTGCCAGCAAAGGTGGAACAGGAGCGTTTGGTGAGCATTTTGTGCC CTGTTACAGAAGACGACGATCGAAGCTTGTTTGAGCTTTTTTTCGCACGC CAGGCCTAGGCGGTCTGTTTGGTTCGGCAGACGTCGGTTTGCAAGCGTTT TAAGGGTGCATGTTGCGGAGCTCCACCAAACGAAGCATCAGACAGTAGTC GTATGCATACAGACAATTTTTTTATGGACAATTTTGTACGATTAAAGCGT TGTGGAGGACAGCTGTGCCAATCACCACGTCTGATGCGGCGCTTCAGCGA ATCGCACTCGAGTGCACACTTTTGAAAGGCTTGTTTGATCAGCAAGTATC TGCAGGGAATCGTACGGATCCGACGTCCTTGTGGGATTGCTTTTATCACA AAACAATCGGTGTGAAGGAGAAATTGTTGAATTGGAATCATTATCAAACT TTTGTGAGAACGATGAACCAGTTCGAACAACCCATCGTTCCCTATGGGAT GATGGAGTCCTGATGCGCATCCGGTATTTGAGCTGCAAGATTTTGCCTCG TTTCGTGGGGTAGCTGACCGTTTGGTTTAGGTACTCTCAGAAACAGTTAT GTTTGAAAATCAGGAGGAAAGTGGCAGGAAGCAGTGTTCAAATCGGTCAA AGCCACCGGAATGCGAAGTAAAATCCAAGAATTCATGAAAGATGTAGCTT GAGTCCTGAAGAATATCCCGGCGGGAATATCAATCGTCCCTGCTCGTGCG CTGTACATACTTTCTTAACAGATAACAAAGCCAGACCAGCACAACAGGTG GATGTCGAGTCCATGGATTTCCGACAAAGCTCGACAGGCCCAGAAAAGCT ACCTCCTTCAGGTACTGACGCCCGAGGGAAACGACTGCAAAACATCTCAA GCAATCACTTAATCAAGCGTTGATTTCAGTTCATCTACAGTCCGTCGTTC CGAATTTTGGGTCGTCTTTTCGGCATGACTTGGGCTTCGTGGTACGTGGT GAAAGCAGTCCATCACTCCTGAATTTTTCAGCCAAAGACCAGTTATCGCG CTCTCGATCATTCAATAACACTCTTTGTTGCCCGTTTGAAGCCGTGGTTG CCCATTGTGCAGCCGATAGTCCAACGGTTCGTCGGTGGTGATTGGCGAAG TCCACTTTCCCGGTCAAGGTGGGCAGCCTCTTGGAGTAATGAAAGCAGTT GTAAGTCTGTCAACACCGAGATGGAAGTATTTCCGGCGAAGTAAGCTACT GGTTTGGTTGCCGTAGGCTGTGCAGCCGGCCGTTGTCATCGCTTCAGCCC TACGTAGACGGTAGAGGTCCGCAGCGCGTCACTTTCCCATCACCATCTTA TCTCTTCTATCTTGCACGCCTTTAGGTTCAGGAGTACTCTGCTCTACAAG GGTTACGACCCGAAACGGGCACAACCGGAGCATGAACGCCCAATTCCGGG TAAATTGACCTCGAAACAACGGTACATCCCCCCCCCTCTTCAATACCACC AGCGACATAGTTGCTGTTGCTGCTGCTCTATGCCTGTGTTGATGGACGGT TTTCCACTTTTTGGAACACGGTTTGGGGTACGTAGTGAATTTCCGAAAAT ACGCAAAGTGTTGACGTACTTCGTATCTGTGGCCATACCTGCGAGGTTGC CCGTGTCGCCTGTATTGCACCAAGTTCGACGCCGATTTCCTGCCCCCTAC CCTTTTGATGCAACACGCTGTGGCTCAATCCCCTTCGTTGCAATCAAGAT ATTGCGCACTCTTGATTTAATCCTGCCCCTTACACTAGCGGCACGTGAAA AATGACAGAAACAAAACCCTCTCCCGATCGTTTTCTAAATCGCTTGTTTT AGTTTCCCCTCCAAAATCTCTCCCCCTTACTTCCTATTCTCCTGTCCACA AATTATTTTGAACGAAGGCGGGCAACATTATCAGGTCAAACGGTCTCAGC ACCAATCGGTACAACGAGCTGAGCCATATCATGGGCAAGCGCAAGGATCT GCGGGAGCGTGTGCAGCACCAAGCATACCTTTACCGCGTAAACGCTGATC TTCGCGGAGACAAGATTCATCCCTTGGTAGACCTCTCCGAAACAACACCC CGGGCTGATCGCCGGGGCAACAAAGGCCAACAGGTGATAGATGGGGCGGT GCGCGTTGGATGCACGTTTGTCCGCCAACAGCACTAGTGACCACAATACA CCTAACGGATAGCGGGAGGGTCGTATAATTTGCTTTAATTATAGCCCTCG CTATTCCCTGCGTCGCTGCTTCGTGTTGTAGCATTCGCGTTCATGTTCAA TGCGGCAGACTTTCGGACGTCGTAACATTGACGTTTATGTTGACGTTGAA ATATGAAGGCCGGTGTGCTCCAGATTCCGTTAGATTTGCAGCATTTCATG CCAACAACGACTGTCTTCCAAAAACTGCTTCATGACGTGTATTTGACTCT GTGGAAGTTACAGAATGCCACCCTCTGGCAGAGCCTACCCTCAATGCTTT CGGCGTTTGAGTATCCCCCATCCATCCAGTCTAGGGATGGTACCGGCAAA TCGAGAGAAATTTTTTAGTCCAGCGATTTTTATCCGGTGCAGTGTTTACG TATGAAATGTTGCACAGTTCGCAGTAGGTCGTTTCCCTGTCTTCGATATT TTACATCCCGATGTCACTGCTTGCGTTTGCCTTTTGTGTTGAAAATTGCT GTAAATGGGCTTATAGGGTGGCTTCACTGGTGTTGCACGTGTGTTCGGAT CTGATGGGGACCCTGCACCAATATCACTGTTCATTTATGTCGCGTTGCTC CTTTCCATGCCAGATGGTTAGGGAGGACAACAAGCCGAGGACGGGGCCAC CTGATAGGAAGATAATGTTCGCCAAGAGCCTCAGAGAAATAGAAGCTTTG AGGCTTCGGCAAAGGAGGCGCCTGATGACCGTGAGTGTCTGCGGATGTTC TGTTGTTTGTCATAATAAGCAAGCGTTGTTCATGCGTACCGCAGTGGAGC CGATCCAAGGCTGTCCTTTTGGCGGCAACAACGACGTTTGGATGTGATGG GCGACTTTCGTTAGGTGTGGTGGGCGACTTGAAGCGGGCTGTGGTCTACC ACGAGACATGTGTTTTCTTGTCAACGCACCACAGCATCGATTTGAAGGCG ATTAGCAAACTTTAGACCTTTTTATAGATCAAGTGGCGGTACGGAGCCTG CCGATGCGTGTGCGTACCCTGACGTTGTCCTGACGCGGCCGTGATGAAGC AGGAAATGGGGTGCGACGATCTTCCCTCGGGGCTATGCCGTCCGTCGATG GACCGCATCGCGACGAATCGCATCCGGAAGGAGTGTCAAAGATTTCCAGT GGTGGCGGAAAGCATCGTCAAGGCGAATGGGCTGAAACTAGAGGAGTTTA ACAGGCGAGCATTTCTTACATCAGCTCGCATTCCTATATACTCCGTAAGA GGATTTTGCGAAAGAGGCATTAAGGCACCGTCTGGGTCGGTGCATCACCT TGTCACATTTCTGATTGGCATCCGTTCACTTTGGTAGACAATGAACTTTT TTATCGCATAATGTCGTGTCCCAATCATTTTAGGACGTTGCGGGAAGTTG GGGCGGGTGAGTTGGAAGGGGGAACTTCGTGTCCTGGCCCTCAAAGCTAG AACGCGTTGTCTATGTTTCAAAAGTGCACCTGTCGCTGACGGTCAAACCT TGTCTCTTAGTCAATATTAATCGCTCGATGCGTGGACTTGTAAATTGCGT CGCGTGTTTGAGTCGCAGGCTGTCCGCGAGGAGTCGAGGCAACTTGCTGT ACAGATGGCAGATCCTGCGAAGCGTGCGAAAGCTGGAGAAGCTGGGAGGC GCATAG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig67:114955..120060+

>mRNA_P-fluviatile_contig67.13261.1 ID=mRNA_P-fluviatile_contig67.13261.1|Name=mRNA_P-fluviatile_contig67.13261.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2070bp|location=Sequence derived from alignment at P-fluviatile_contig67:114955..120060+ (Porterinema fluviatile SAG_2381)
ATGGTGGCGCTCCTGCCGGTAGCCTTGGCTCTAGGGCTGGCATGCTGTCA
ACGAGACTTAGCGAGAGAGAGGTCAGCAGCACTTGATACCGGAGGACCTG
GTTCAACATCAGCATCGCCTGTCAAGGCGAGGAATGCGCACAGCTCTGGG
GTATCGGCAGCAGCCGAAGCTTCGGCGGTTGGCTGGTTTGTTCGCGGAGG
CGGGCATAATGGTAATTGCCTGGCTGTCACTGAGGGAGCAGGAGCGCCGT
CGGTTTCTCTCTTCGGACCGGAGGAAAAGATGGTGGCGCTCCTGCCGGTA
GCCTTGGCTCTAGGGCTGGCATGCTGTCAACGAGACTTAGCGAGAGAGAG
GTCAGCAGCACTTGATACCGGAGGACCTGGTTCAACATCAGCATCGCCTG
TCAAGGCGAGGAATGCGCACAGCTCTGGGGTATCGGCAGCAGCCGAAGCT
TCGGCGGTTGGCTGGTTTGTTCGCGGAGGCGGGCATAATGGTAATTGCCT
GGCTGTCACTGAGGGAGCAGGAGCGCCGTCGGTTTCTCTCTTCGGACCGG
AGGAAAAGGAATTGGACCGATATTCAGCGGCGTTGGCCGGGACACACTTC
CTAAGGCAGGAGAGGGACAGAGTCATCAAAGACACCACCAACCCGTTGGC
GTATTTGTATCTCAGCGAATTGGACCGATATTCAGCGGCGTTGGCCGGGA
CACACTTCCTAAGGCAGGAGAGGGACAGAGTCATCAAAGACACCACCAAC
CCGTTGGCGTATTTGTATCTCAGCATAACAAAGCCAGACCAGCACAACAG
GTGGATGTCGAGTCCATGGATTTCCGACAAAGCTCGACAGGCCCAGAAAA
GCTACCTCCTTCAGATAACAAAGCCAGACCAGCACAACAGGTGGATGTCG
AGTCCATGGATTTCCGACAAAGCTCGACAGGCCCAGAAAAGCTACCTCCT
TCAGGCGGGCAACATTATCAGGTCAAACGGTCTCAGCACCAATCGGTACA
ACGAGCTGAGCCATATCATGGGCAAGCGCAAGGATCTGCGGGAGCGTGTG
CAGCACCAAGCATACCTTTACCGCGTAAACGCTGATCTTCGCGGAGACAA
GATTCATCCCTTGGTAGACCTCTCCGAAACAACACCCCGGGCTGATCGCC
GGGGCAACAAAGGCCAACAGGCGGGCAACATTATCAGGTCAAACGGTCTC
AGCACCAATCGGTACAACGAGCTGAGCCATATCATGGGCAAGCGCAAGGA
TCTGCGGGAGCGTGTGCAGCACCAAGCATACCTTTACCGCGTAAACGCTG
ATCTTCGCGGAGACAAGATTCATCCCTTGGTAGACCTCTCCGAAACAACA
CCCCGGGCTGATCGCCGGGGCAACAAAGGCCAACAGGACAACAAGCCGAG
GACGGGGCCACCTGATAGGAAGATAATGTTCGCCAAGAGCCTCAGAGAAA
TAGAAGCTTTGAGGCTTCGGCAAAGGAGGCGCCTGATGACCGACAACAAG
CCGAGGACGGGGCCACCTGATAGGAAGATAATGTTCGCCAAGAGCCTCAG
AGAAATAGAAGCTTTGAGGCTTCGGCAAAGGAGGCGCCTGATGACCGAAA
TGGGGTGCGACGATCTTCCCTCGGGGCTATGCCGTCCGTCGATGGACCGC
ATCGCGACGAATCGCATCCGGAAGGAGTGTCAAAGATTTCCAGTGGTGGC
GGAAAGCATCGTCAAGGCGAATGGGCTGAAACTAGAGGAGAAATGGGGTG
CGACGATCTTCCCTCGGGGCTATGCCGTCCGTCGATGGACCGCATCGCGA
CGAATCGCATCCGGAAGGAGTGTCAAAGATTTCCAGTGGTGGCGGAAAGC
ATCGTCAAGGCGAATGGGCTGAAACTAGAGGATCGCAGGCTGTCCGCGAG
GAGTCGAGGCAACTTGCTGTACAGATGGCAGATCCTGCGAAGCGTGCGAA
AGCTGGAGAAGCTGGGAGGCGCATAGTCGCAGGCTGTCCGCGAGGAGTCG
AGGCAACTTGCTGTACAGATGGCAGATCCTGCGAAGCGTGCGAAAGCTGG
AGAAGCTGGGAGGCGCATAG
back to top