mRNA_P-fluviatile_contig66.13249.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig66.13249.1
Unique NamemRNA_P-fluviatile_contig66.13249.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig66.13249.1 vs. uniprot
Match: A0A6H5JD38_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD38_9PHAE)

HSP 1 Score: 454 bits (1169), Expect = 4.150e-153
Identity = 253/467 (54.18%), Postives = 304/467 (65.10%), Query Frame = 1 
Query:    1 LLQDVVAWWSRGAPPELEEPAPFNLTFLVGEEAGMEWLEGADARGYDSISTLEGKNLSLSHSGGRRNAAVPPRWDSSDCMASWGVPELQTEGDPGGYVVFSEGREQLGNNRFLLSDGLVIAKVLNRTLVEFPMRDSRIATVDAELGSCDYWDCESLCSYHRILDLWTFRSMLRKGVVRVDEFFTVLFADKEQALLRSLISPENITDFFLVYNNWQARARIRSRSVIEMKMAWKSALRREPIDLLRPNPFYLDLVGSLIDAQEGWEGGHFMAVQWRTETATGNLTECFQNYVFSAVEEQRLALGFGRHQVFFNTDLVGQASTTYNATVVYAYQGVVETIRQTYPLAMDNTVYDCLATQEDAGVKAMISGLVSASAEFLLSSSFNGSGSSACQKPHSKYIDLIAEWRLDVIGKNRTSIGQML-LVPAETGLQSLQLTLLVVALSTLVTLAIVWVRRGDLGDRPRSKKVP 1398
            LLQ V AWW  G     +E  P N + LVGEEAG EWL+GA+AR  DS + LEG    +    GRR+  +PPRWDSS CM SWGVPELQTE DPGGY++FSEGR                                                      YHRILDLW FR++LR  ++  + F TVL A+ EQ LL SL++  NIT FF  Y+ WQARA             W    RREP+DLLRPNPFYL LVG LI+AQEGW+ G F++VQWRTET+TGNLTEC+  +V SAVEE+RL+LGF R QVFFNTDLVG+ STTYNATVV AY GVV+ IR  YP+AMDNTVYD L  ++DAGVKA++SGL+SASA+FLL+SSFNG+GS+ CQKPHSKYIDL+ +WRLDV+GK+ +SIGQML L+  E G +      L+V L+ LV LA V V    +  RPRSKKVP
Sbjct:   10 LLQKVSAWWLWGETSIPDEVPPLNFSVLVGEEAGREWLQGAEARSGDSTAALEG----VQQVEGRRSTNIPPRWDSSTCMESWGVPELQTEVDPGGYLLFSEGR------------------------------------------------------YHRILDLWAFRALLRDRLLSAEGFLTVLSAEWEQTLLPSLVTAGNITSFFEEYDQWQARA-------------W----RREPVDLLRPNPFYLGLVGKLIEAQEGWKDGGFLSVQWRTETSTGNLTECYGVHVRSAVEERRLSLGFSRSQVFFNTDLVGETSTTYNATVVSAYSGVVDAIRGDYPVAMDNTVYDILNDEQDAGVKAIVSGLISASADFLLTSSFNGTGSNECQKPHSKYIDLVTDWRLDVVGKDLSSIGQMLPLLSLEEGGEDGTPLALLVLLAGLVALAAVLVWNQRVIGRPRSKKVP 401
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BLAST of mRNA_P-fluviatile_contig66.13249.1 vs. uniprot
Match: D7G2V9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2V9_ECTSI)

HSP 1 Score: 409 bits (1050), Expect = 2.830e-136
Identity = 217/336 (64.58%), Postives = 259/336 (77.08%), Query Frame = 1 
Query:  397 MRDSRIATVDAELGSCDYWDCESLCSYHRILDLWTFRSMLRKGVVRVDEFFTVLFADKEQALLRSLISPENITDFFLVYNNWQARARIRSRSVIEMKMAWKSALRREPIDLLRPNPFYLDLVGSLIDAQEGWEGGHFMAVQWRTETATGNLTECFQNYVFSAVEEQRLALGFGRHQVFFNTDLVGQASTTYNATVVYAYQGVVETIRQTYPLAMDNTVYDCLATQEDAGVKAMISGLVSASAEFLLSSSFNGSGSSACQKPHSKYIDLIAEWRLDVIGKNRTSIGQMLLVP--AETGLQSLQLTLLVVALSTLVTLAIVWVRRGDLGDRPRSKKVP 1398
            M+ SRI+T DA+LGSCDY+DCE LCSYHRILDLW FR++LR  ++  ++F TVL A+ EQ LL SL++  NIT FF  Y+ WQ         VI MKMAWKSALRREP+DLLRPNP YLD VG LI+AQEGW+ G F++VQWRTET+TGNLTEC+  +V SAVEE+RL+LGF R QVFFNTDLVG+ STTYNATVV A  GVV+ IR  YP AMDNTVYD L  + DAGVKA+ISGL+SASA+FLL+SSFNG+GS+ CQKPHSKYIDL+ +WRL+V+GK+ +SIGQML  P   E G     L LLV+ L+ LV LA V V    +  RPRSKKVP
Sbjct:    1 MQHSRISTADADLGSCDYFDCERLCSYHRILDLWAFRALLRDRLLSAEDFLTVLSAEWEQTLLPSLVTAGNITSFFEEYDQWQ---------VIVMKMAWKSALRREPVDLLRPNPLYLDSVGQLIEAQEGWKDGGFLSVQWRTETSTGNLTECYGLHVRSAVEERRLSLGFSRSQVFFNTDLVGETSTTYNATVVSANNGVVDAIRGDYPCAMDNTVYDILNDERDAGVKAIISGLISASADFLLTSSFNGTGSNECQKPHSKYIDLVTDWRLEVVGKDLSSIGQMLPPPLLVEGGGDGQPLALLVL-LAGLVALAAVLVWDQRVIGRPRSKKVP 326
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BLAST of mRNA_P-fluviatile_contig66.13249.1 vs. uniprot
Match: D8LN55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN55_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 3.390e-98
Identity = 165/358 (46.09%), Postives = 228/358 (63.69%), Query Frame = 1 
Query:  205 AVPPRWDSSDCMASWGVPELQTEGDPGGYVVFSEGREQLGNNRFLLSDGLVIAKVLNRTLVEFPMRDSRIATV-DAELGSCDYWDCESLCSYHRILDLWTFRSMLRKGVVRVDEFFTVLFADKEQALLRSLISPENITDFFLVYNNWQARARIRSRSVIEMKMAWKSALRREPIDLLRPNPFYLDLVGSLIDAQEGWEGGHFMAVQWRTETATGNLTECFQNYVFSAVEEQRLALGFGRHQVFFNTDLVGQASTTYNATVVYAYQGVVETIRQTYPLAMDNTVYDCLATQEDAGVKAMISGLVSASAEFLLSSSFNGSGSS------ACQKPHSKYIDLIAEWRLDVIGKNRTSIGQM 1257
            A PP WDS+ CMA WGVPELQ E DP GYVV+  GREQLG N+FL++DG+ +AK L RT VE+P++D+R+A + DA +G   YWD   LC YHRILDL +FR+M+  G +   E FT + +D  + LLR     E+I D F   + +Q         VI M+  WKS   RE +  LRPNPF++ +V  L++AQ+ WE G F+AVQWRTE A G+LTEC++  V + VEEQR+ALG+G HQV FNTDL G+ S TY A+       V++ I   YP A+ N ++      +D+GV+A +SGL  AS++ ++ SS N   +        C+KP+S YI LI EWR +++ K   ++ +M
Sbjct:   87 ATPPAWDSTLCMAHWGVPELQDEPDPNGYVVYVNGREQLGGNKFLVTDGIFMAKALGRTFVEYPVKDARVAKLEDASIGLGAYWDLSELCMYHRILDLTSFRNMMADGRIP-PEAFTTIRSDTHEVLLRHATDEEHIVDMFKDSDKYQ---------VIAMESTWKSGKEREALQFLRPNPFFVGIVRMLLEAQKDWETGEFVAVQWRTELANGDLTECYKE-VKALVEEQRVALGYGTHQVLFNTDLYGKTSGTYKASAQAHGAAVLDLINDDYPQALHNELHHFFTEIDDSGVRAFVSGLAVASSQVMIGSSLNDPRTKDIPDAYRCEKPYSGYITLITEWREEILHKEPETVVRM 433
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BLAST of mRNA_P-fluviatile_contig66.13249.1 vs. uniprot
Match: A0A6H5JCA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCA8_9PHAE)

HSP 1 Score: 314 bits (804), Expect = 6.550e-96
Identity = 164/358 (45.81%), Postives = 227/358 (63.41%), Query Frame = 1 
Query:  205 AVPPRWDSSDCMASWGVPELQTEGDPGGYVVFSEGREQLGNNRFLLSDGLVIAKVLNRTLVEFPMRDSRIATVD-AELGSCDYWDCESLCSYHRILDLWTFRSMLRKGVVRVDEFFTVLFADKEQALLRSLISPENITDFFLVYNNWQARARIRSRSVIEMKMAWKSALRREPIDLLRPNPFYLDLVGSLIDAQEGWEGGHFMAVQWRTETATGNLTECFQNYVFSAVEEQRLALGFGRHQVFFNTDLVGQASTTYNATVVYAYQGVVETIRQTYPLAMDNTVYDCLATQEDAGVKAMISGLVSASAEFLLSSSFNGSGSS------ACQKPHSKYIDLIAEWRLDVIGKNRTSIGQM 1257
            A PP WDS+ CMA WGVPELQ E DP GYVV+  GREQLG N+FL+SDG+ +AK L RT VE+P++D+R+A ++ A +G   YWD   LC YHRILDL +FR+M+  G +   E FT + +D  + LL      E++ D F  Y  +Q         VI M+  WKS   R+ +  LRPNPF++ +V  L++AQ+ WE G F+AVQWRTE + GNLTEC+Q  V + VEEQR+ALG+G HQV FNTDL G+ S TY A+       V++ I   YP A+ N ++      +D+GV+A +SGL  AS++ ++ SS N   +        C+KP+S YI LI EWR +++ K   ++ +M
Sbjct:  212 ATPPAWDSTLCMAHWGVPELQDEPDPNGYVVYVNGREQLGGNKFLVSDGIFMAKALGRTFVEYPVKDARVAKLEEASIGLGAYWDLSELCMYHRILDLNSFRNMMVDGRIP-PEAFTTIRSDSHEVLLYHATDEEHMVDMFKDYEKYQ---------VIVMESTWKSGNERDALQFLRPNPFFVGIVRMLLEAQKDWETGEFVAVQWRTELSNGNLTECYQE-VKALVEEQRVALGYGTHQVLFNTDLYGKTSGTYKASAQAHGAAVLDLINHDYPHALHNELHQFFTEIDDSGVRAFVSGLAVASSQVMIGSSLNDPRTKDILDAYRCEKPYSGYITLITEWREEILHKEPETVVRM 558
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BLAST of mRNA_P-fluviatile_contig66.13249.1 vs. uniprot
Match: A0A6H5KP62_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KP62_9PHAE)

HSP 1 Score: 293 bits (751), Expect = 4.420e-89
Identity = 176/406 (43.35%), Postives = 239/406 (58.87%), Query Frame = 1 
Query:   13 VVAWWSRGAPPELEEPAPFNLTFLVGEEAGM-EWLEGADARGYDSISTLEGKNLSLSHSGGRRNAA-VPPRWDSSDCMASWGVPELQTEGDPGGYVVFSEGREQLGNNRFLLSDGLVIAKVLNRTLVEFPMRDSRIATVDAELGSCDYWDCESLCSYHRILDLWTFRSMLRKGVVRVDEFFTVLFADKEQALLRSLISPENITDFFLVYNNWQARARIRSRSVIEMKMAWKSALRREPIDLLRPNPFYLDLVGSLIDAQEGWEGGHFMAVQWRTETATGNLTECFQNYVFSAVEEQRLALGFGRHQVFFNTDLVGQASTTYNATVVYAYQGVVETIRQTYPLAMDNTVYDCLATQEDAGVKAMISGLVSASAEFLLSSSFNG---SGSSACQKPHSKYIDLIAEWR 1215
            V + W+R +  EL        T  +G E G  EW+     RG   +               RR+A  +PP W S+DCM  WGVP L TE DP GY++F  GREQLG+NR+LLSDGL IAK LNRTLVEFP+ ++RI+  D++LG   YW  +SLC YHRIL L  FRS++  G + V++F  +         + +L + +++ + F  Y + Q         VI M   WKS +RREP+ L++P PFY +L   LID Q+GWE   F+AVQWRTET+TGNLT C+  +V  AVE  R   GF R QVFFNTDL   +S TY++  +   Q V+  I + YP AM++TV   L   ED GV+++ SG+V+A A  LL+S+      S    CQK HS ++DL+ E+R
Sbjct:   76 VPSLWTRQSAVEL-------TTVRLGWEGGRGEWM-----RGQRELQE-------------RRDARFLPPEWSSADCMKRWGVPWLLTEPDPAGYLIFVNGREQLGSNRYLLSDGLYIAKTLNRTLVEFPVANARISRADSDLGFGAYWGLDSLCRYHRILGLGAFRSLIEAGRLDVEKFLVMTPVRPSADPMSTLKTAKDVREAFGGYEDSQ---------VIVMNDQWKSNIRREPLKLIKPLPFYENLARRLIDQQQGWENEAFLAVQWRTETSTGNLTACY-GHVREAVERYREQEGFDRGQVFFNTDLTPHSSGTYSSQQLAVKQQVLAMIDEDYPSAMNSTVTAYLDNLEDTGVQSLTSGVVAALARVLLASTKRKWWWSQRGVCQKIHSHFVDLVVEFR 446
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BLAST of mRNA_P-fluviatile_contig66.13249.1 vs. uniprot
Match: D8LFR0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFR0_ECTSI)

HSP 1 Score: 290 bits (742), Expect = 9.740e-88
Identity = 162/345 (46.96%), Postives = 218/345 (63.19%), Query Frame = 1 
Query:  193 RRNAA-VPPRWDSSDCMASWGVPELQTEGDPGGYVVFSEGREQLGNNRFLLSDGLVIAKVLNRTLVEFPMRDSRIATVDAELGSCDYWDCESLCSYHRILDLWTFRSMLRKGVVRVDEFFTVLFADKEQALLRSLISPENITDFFLVYNNWQARARIRSRSVIEMKMAWKSALRREPIDLLRPNPFYLDLVGSLIDAQEGWEGGHFMAVQWRTETATGNLTECFQNYVFSAVEEQRLALGFGRHQVFFNTDLVGQASTTYNATVVYAYQGVVETIRQTYPLAMDNTVYDCLATQEDAGVKAMISGLVSASAEFLLSSSFNG---SGSSACQKPHSKYIDLIAEWR 1215
            RR+A  +PP W S+ CM  WGVP L TE DP GY++F  GREQLG+NR+LLSDGL IAK LNRTLVEFP+ ++RI+  D++LG   YWD +SLC YHRIL L  FRS++  G + V++F  +         + +L + +++ + F  Y + Q         VI M   WKS +RR P+ L+RP PFY +L   LID Q+GWE   F+AVQWRTET+TGNLT C+  +V  AVE  R   GF R QVFFNTDL+  +S TY++  +     V+  I + YP AM+NTV   L   ED GV+++ SG+V+A    LL+S+      S    CQK HS ++DL+ E+R
Sbjct:  114 RRDARFLPPEWGSAGCMKRWGVPWLLTEPDPAGYIIFVNGREQLGSNRYLLSDGLYIAKTLNRTLVEFPVANARISRADSDLGFGAYWDLDSLCQYHRILGLGAFRSLIEAGRLDVEKFLVMTPVRPSADPMSTLRTAKDVREAFGGYEDSQ---------VIVMNGQWKSNIRRYPLKLIRPLPFYENLARRLIDQQQGWENEAFLAVQWRTETSTGNLTACY-GHVREAVERYREQEGFDRGQVFFNTDLMPHSSGTYSSQQLAVKLQVLAMIDEDYPSAMNNTVTAYLDNLEDTGVQSLTSGVVAALPRVLLASTERKWWWSRRGVCQKIHSHFVDLVVEFR 448
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BLAST of mRNA_P-fluviatile_contig66.13249.1 vs. uniprot
Match: D7G2V8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2V8_ECTSI)

HSP 1 Score: 119 bits (297), Expect = 4.850e-28
Identity = 58/103 (56.31%), Postives = 71/103 (68.93%), Query Frame = 1 
Query:    1 LLQDVVAWWSRGAPPELEEPAPFNLTFLVGEEAGMEWLEGADARGYDSISTLEGKNLSLSHSGGRRNAAVPPRWDSSDCMASWGVPELQTEGDPGGYVVFSEG 309
            LL +V AW   G     +E  P N + LVG+EAG EWL+GA+AR  DS + LEG    +  + GRR+  +PPRWDSS CM SWGVPELQTE DPGGY++FSEG
Sbjct:   26 LLHNVSAWRLWGETSIPDEVPPLNFSVLVGKEAGGEWLQGAEARSGDSTAALEG----VQQAEGRRSTNIPPRWDSSTCMESWGVPELQTEVDPGGYLLFSEG 124
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig66.13249.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
A0A6H5JD38_9PHAE4.150e-15354.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G2V9_ECTSI2.830e-13664.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8LN55_ECTSI3.390e-9846.09Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JCA8_9PHAE6.550e-9645.81Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KP62_9PHAE4.420e-8943.35Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LFR0_ECTSI9.740e-8846.96Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G2V8_ECTSI4.850e-2856.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig66contigP-fluviatile_contig66:802198..807518 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons8
Model size1780
Cds size1299
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig66.13249.1prot_P-fluviatile_contig66.13249.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig66 802300..807139 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817077.6958253-UTR-P-fluviatile_contig66:802197..8022991622817077.6958253-UTR-P-fluviatile_contig66:802197..802299Porterinema fluviatile SAG_2381UTRP-fluviatile_contig66 802198..802299 +
1693571045.6341286-UTR-P-fluviatile_contig66:802197..8022991693571045.6341286-UTR-P-fluviatile_contig66:802197..802299Porterinema fluviatile SAG_2381UTRP-fluviatile_contig66 802198..802299 +
1622817077.797684-UTR-P-fluviatile_contig66:807139..8075181622817077.797684-UTR-P-fluviatile_contig66:807139..807518Porterinema fluviatile SAG_2381UTRP-fluviatile_contig66 807140..807518 +
1693571045.7363179-UTR-P-fluviatile_contig66:807139..8075181693571045.7363179-UTR-P-fluviatile_contig66:807139..807518Porterinema fluviatile SAG_2381UTRP-fluviatile_contig66 807140..807518 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817077.7075956-CDS-P-fluviatile_contig66:802299..8023861622817077.7075956-CDS-P-fluviatile_contig66:802299..802386Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 802300..802386 +
1693571045.6456275-CDS-P-fluviatile_contig66:802299..8023861693571045.6456275-CDS-P-fluviatile_contig66:802299..802386Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 802300..802386 +
1622817077.7188106-CDS-P-fluviatile_contig66:803061..8031831622817077.7188106-CDS-P-fluviatile_contig66:803061..803183Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 803062..803183 +
1693571045.656503-CDS-P-fluviatile_contig66:803061..8031831693571045.656503-CDS-P-fluviatile_contig66:803061..803183Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 803062..803183 +
1622817077.7295697-CDS-P-fluviatile_contig66:803867..8040291622817077.7295697-CDS-P-fluviatile_contig66:803867..804029Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 803868..804029 +
1693571045.666613-CDS-P-fluviatile_contig66:803867..8040291693571045.666613-CDS-P-fluviatile_contig66:803867..804029Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 803868..804029 +
1622817077.740884-CDS-P-fluviatile_contig66:804464..8046631622817077.740884-CDS-P-fluviatile_contig66:804464..804663Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 804465..804663 +
1693571045.6851034-CDS-P-fluviatile_contig66:804464..8046631693571045.6851034-CDS-P-fluviatile_contig66:804464..804663Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 804465..804663 +
1622817077.7517548-CDS-P-fluviatile_contig66:804972..8050861622817077.7517548-CDS-P-fluviatile_contig66:804972..805086Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 804973..805086 +
1693571045.7003438-CDS-P-fluviatile_contig66:804972..8050861693571045.7003438-CDS-P-fluviatile_contig66:804972..805086Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 804973..805086 +
1622817077.762851-CDS-P-fluviatile_contig66:805701..8058931622817077.762851-CDS-P-fluviatile_contig66:805701..805893Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 805702..805893 +
1693571045.7102969-CDS-P-fluviatile_contig66:805701..8058931693571045.7102969-CDS-P-fluviatile_contig66:805701..805893Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 805702..805893 +
1622817077.7745957-CDS-P-fluviatile_contig66:806172..8062681622817077.7745957-CDS-P-fluviatile_contig66:806172..806268Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 806173..806268 +
1693571045.7186055-CDS-P-fluviatile_contig66:806172..8062681693571045.7186055-CDS-P-fluviatile_contig66:806172..806268Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 806173..806268 +
1622817077.7850251-CDS-P-fluviatile_contig66:806812..8071391622817077.7850251-CDS-P-fluviatile_contig66:806812..807139Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 806813..807139 +
1693571045.7285464-CDS-P-fluviatile_contig66:806812..8071391693571045.7285464-CDS-P-fluviatile_contig66:806812..807139Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 806813..807139 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig66.13249.1

>prot_P-fluviatile_contig66.13249.1 ID=prot_P-fluviatile_contig66.13249.1|Name=mRNA_P-fluviatile_contig66.13249.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=433bp
MEWLEGADARGYDSISTLEGKNLSLSHSGGRRNAAVPPRWDSSDCMASWG
VPELQTEGDPGGYVVFSEGREQLGNNRFLLSDGLVIAKVLNRTLVEFPMR
DSRIATVDAELGSCDYWDCESLCSYHRILDLWTFRSMLRKGVVRVDEFFT
VLFADKEQALLRSLISPENITDFFLVYNNWQARARIRSRSVIEMKMAWKS
ALRREPIDLLRPNPFYLDLVGSLIDAQEGWEGGHFMAVQWRTETATGNLT
ECFQNYVFSAVEEQRLALGFGRHQVFFNTDLVGQASTTYNATVVYAYQGV
VETIRQTYPLAMDNTVYDCLATQEDAGVKAMISGLVSASAEFLLSSSFNG
SGSSACQKPHSKYIDLIAEWRLDVIGKNRTSIGQMLLVPAETGLQSLQLT
LLVVALSTLVTLAIVWVRRGDLGDRPRSKKVP*
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mRNA from alignment at P-fluviatile_contig66:802198..807518+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig66.13249.1 ID=mRNA_P-fluviatile_contig66.13249.1|Name=mRNA_P-fluviatile_contig66.13249.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=5321bp|location=Sequence derived from alignment at P-fluviatile_contig66:802198..807518+ (Porterinema fluviatile SAG_2381)
TTGCTGCAAGACGTCGTGGCATGGTGGTCACGGGGGGCACCACCCGAATT
AGAGGAGCCGGCGCCCTTCAATCTCACCTTCCTTGTTGGGGAGGAGGCTG
GCATGGAATGGCTAGAGGGAGCGGACGCGAGGGGATACGATAGCATTTCT
ACGCTAGAAGGCAAAAACCTGTCGTTGAGCCATTCGGGGGTCCCACCGGG
ACTCATAAGCTGTTGGAAGAGGGGAATGAAAACAATGCACAGGCACATCG
GGGGCAAGAATGACAAGTCTACGGATAAATTAAGATAAAGTCGAGTGAAC
GCACGGTTCTCTATTCTTTTGCTTTCCAACCCACATTTTCGCGGCCTTCT
TCTAGGTCGTGGCGCGAGGAAAGCCTAGGCTTTGCTCGGCCCGGCTGGTA
GGCGTTGCCGAACCGTTCCGAGCGAAACACCTCGAGACGGACACCCGCTG
CGTGGCAATCCTCCCAGTGGCTTTGGGCTCACGCGCGTTTTAACTCCGCC
CCGGCGCAATGGGATCTTTGGAGGCAACGCGGCGTATTGTGGTAAAGCCA
CCAAGCACTCATTCCCTTTATGGGCATCTGTGAAACTTTTGGCACCCGGG
AATCCGCTCCCGTGGAAATCTGCGGGATTCGCCTCGAGCGAGAGTGCGGC
ACCTGTCCCCATTCTGCAACGCTCTGCAACGCAATCGATGTCGAGAGTCA
GTACCGCGAAGTGGTTGTTGCTGCTCTGCTTGTGTGCTCCGATATTCATT
CGAAGCGAAAGCACGAATTAACAAAAAGCAGCGGCAGGTATGAAAAATTG
ACAGCACAAAACCGAATGCCGCCAACGAACAGCCACATCAACTGCAGACT
ACCGAAAGCCGGAGGGGCGACGGAATGCCGCAGTCCCACCACGGTGGGAC
TCCAGTGACTGCATGGCTAGCTGGGGAGTACCGGAGCTGCAGACAGAGGG
CGATCCGGGGGGATACGTTGTCTTCTCAGAGGGCAGGTGCAAAGCAATCT
GTCAAAGGCGGCCTTGATTTGCTTTTGGTGTCGATTGTCGATGTTTTTCA
CTGTCATTTCGTGAGCGGAAACATTAGGCAACAGGTGTACTGTGCGCACT
TCCGGGGCTGGAATGTCTTCCTTCATGGCGCTGCTACAATGGCAGAATGA
AAAGTTGACGCAACCATTCAAGGACGAAAAGCGGGGGTGGGCGGAAGGGG
GGGTTCCCTGTTCCATTCACTGCTGGTGTTTCTTCGTTTTTTTTTTGTTC
TCATGAGGTACATACTTTCACCTACGTTGGCCGATTTCCGAGATGCGGCA
CTCTTGCAATCTTCGAATACCATCGCGAGCAACGCTTTGCCATCCGCTCG
CCTCCTCCACCACCAGGCAACCTGGCGCCAAGGACGATCAGACTCGCGCC
TGCATCGATACCTCCCATGCGAGGCTTTTCATACATCTTCAGTAGCCGGG
CTTCGCAGCATTTGCATGGGTTTCGGCCTGTATTAGTCTGGACTTCTGGT
TCGCCGCTTCCGTGCTCGAAGCGATTTCCTTTAGCGTGCCGCGCACGTCT
ACCCGGCTTTCAGCCATTGTTGCTGCCAATGCTGCTGTTACTGCTGCTGC
TGCTGCCGCTGCTGCTGCTGCGGTTCTTACTGCTGCTGCGCTCGCTGCTG
CTACCTGCGCCCGTGCTCAGGGAGCAACTGGGAAACAACAGGTTTCTGCT
GTCGGATGGTCTCGTCATCGCGAAAGTGCTCAACCGAACCCTCGTAGAGT
TTCCGATGCGGGACTCGAGGATAGCCACCGTGGACGCGGAGCTAGGGTCG
TGTGACTATTGGGACTGCGAAAGCCTGTGCTCGTGAGTCAAAAGCAAGAA
ACATCCTTAGTTCTCGGCGGACATTCGGGGTCCTTGCTTCCCGTGCGCAT
CTTCGATGAGGGTGAAGCCCTTGGCGGTTGGGCCGGACTTCGTTGTGGGT
TGGGATGTGGAAGGGGTTCACGCAGACTGATCGGCGTTCGTACCTGGCGC
GCGTGTCCTACGATGTCTTGGCGAGGGCAGGTGATCGATTCGTCGCTGAA
ATACACATGTGGTAGCCTCGATTCATCGGCCTTGTCAGCTGTTTCTACGG
TAGTGGCAGCTAAAACACCCGTTGAGCGACTCAAATCAGGGCGAGGACGT
CACTTTCCCCACACGTGCACAAACACCAAGCTGACTCCTCCCTACCGCTC
AATCCCCATCCACGCATCGTCTTGTTGCACCCTCTCCCCTGGCGAACTCG
GCCCTGCTCCGCGGCAGGTACCATCGAATCCTCGACCTCTGGACTTTTCG
CTCGATGCTGCGAAAGGGCGTGGTGCGGGTTGACGAATTTTTCACGGTGC
TCTTTGCTGACAAAGAGCAGGCCTTGCTGCGAAGTCTGATCAGTCCGGAA
AACATCACCGACTTTTTCCTCGTTTACAACAACTGGCAGGCAAGAGCCAG
GATTCGATCTCGATCGGTTCGGGGAAAATAGAGTTAAGCGGTAGGATTAG
GATGTACCTGTGCGGCAGCCGTCTCTCCAGTTGTGACATCGAGCAAGATT
TACAAATATTTCAACGTGCAGGTCAGCTCGGATGCCTAACGCGTCGCACT
AGGTGTGTAATATTGCAGTCATCATATCCATTGAGCTTAAACCTGTAGGC
AGCGTCCAATTTCGAGAACTGAGCTTAAAGAGCAGGCGACTGCATGTCCC
AGATACTGGCGGTGAAACATCTCGTACCGTCGTGTTCACGACGTCCTTAA
GCCCAGCCCCTTACGCAAGTTACAGGTCATCGAGATGAAGATGGCATGGA
AAAGCGCGCTCAGACGAGAACCCATCGATCTCCTGCGACCAAACCCCTTC
TACCTCGACTTGGTCGGGAGCTTGATAGATGCACAGGAGGTGAGGAAAAC
GCAACCTAAATGCTGCATACGACATGCTCGCTAGCTTGACGGTTCCATTC
GTTGCCACCACGCCAATCTAACAGCTCCACGGTGCGGCAGGGCTCAAGAT
TTGAACCCACATATCGCGAAAAGTCAGGATGACGTTCTGCCTGAACGGTT
GCATTAACTTTTGGTGGCCTTCGTAGGAGAGATGGGGAGTCAGCGAGTCG
TAATATCCAATTGGTCAGAATGCTCAAGGTCTTTCCACCATGCGGTTTTG
TCGACGATCCCATCATCATCGATGCAATATGTCCGCCACGAATGACCAGA
TTCAAGAACTGCTGCCGGCCATGTCCCCTGCATCCCGCAGCAGCCTGCTG
TCAATGCTTACACCGGGTTGGCCGCGGGCCACGCTGAAATAGATGCAATT
TTTACTGACCTGCGATATCCCGGCAGTCCTAAGCAGTCGTCTCGTGAAGC
CACTTAGCAGCCACGCCGACGGGGACAGCGAGCAGGTCCTTGGCAGCACG
AAACCAATTCACAGGTGTATGTCATCGGTGTTTCTCTATCTTGTCGAAAT
CGTTCGTTTCTGCATGATGCGTTCGACGGCCGGGGGCGCGGGGCGGGAGC
GCAGGGTTGGGAAGGCGGGCACTTCATGGCGGTGCAGTGGCGCACTGAAA
CAGCGACCGGTAACTTGACGGAGTGCTTCCAGAACTACGTCTTCTCGGCT
GTGGAAGAGCAGCGCCTGGCGCTAGGCTTCGGTCGACATCAGGTGTTCTT
CAACACTGATTTGGTTGGGCAGGCGTCCACCACGTACAACGCTACGGTGA
GTAAGGCTTCGCCATTCCTGTCCCAAGCCGGTTTTAGTCCACATTTCTTT
TGTTTTTTAACAGCTTTTATCGTTTCGAGTGTATTGAGATATTTGGAGGT
ACGCGCCTTTCGCGGCTATGCTTGTTTCGTGATGAAGCGTAGGACATGTC
TTCGTATGTTTGCTTTACGTGTCGCTGGGATGTTTGCTATCCTGGTATGT
GATTTGGCGAACCTGATGTTCATGTTCGGCTGATGTTTTCATACCTGTGC
TACTCGCCCTCTGTACACGACTTAGGTGGTTTACGCTTACCAAGGCGTAG
TGGAAACGATCCGTCAAACGTACCCTTTGGCGATGGACAACACAGTTTAC
GACTGTCTAGCAACCCAGGAGGTAAATGTATGCGTGGGCTCGTGAGCGTA
TTTCGGTCTCATCTTGGTTTGCCGAGCGTAGACATGAAGGAATGAAACAC
AGGGGGAATTGCGGCAAGGTCTTGCGCCCGCCTGGTGACGCTTCTTGATT
TATGTCGGCGCCCTGTTCATTGCAAGCCGGTTCTTACATAAGATATGTCC
CTTGTACCTCAGGTTTGCTTACATCGTACAGGATGGTTAATCTCGCTGTC
AAGACAGCAAGCGTCAGCAAGCCGACAGCGGCAAGCTGACAGATACTACC
TGTTTGCCGCCCACGCGTATAGTGCATGCGTACGTGAAATCCCTCGACTC
GAAACTTTCCTTCAATGCTCGATGCTTGCTTGCGAGACGGACACTGCTGT
TGGTCCTGCGCGTCTGCTCTTTTGAGGACAACGGTCGAATGTATTTCAAG
GATCCTCGATGGAGATGTCCGTTTTTCTCGTTCACTTCTACGAACCTGAT
CGGCATTCGTTTTGTCCCGACTGTGCCGTTTGCCCTGGTGCACGGATATG
TATATTGAAAAGCAGGACGCCGGCGTGAAGGCCATGATCAGCGGCTTGGT
CTCCGCTTCGGCCGAATTCTTGCTGTCTTCTTCCTTCAACGGGTCAGGCA
GCAGCGCGTGTCAAAAGCCACACTCGAAGTACATTGACCTCATCGCCGAA
TGGCGGCTAGACGTTATTGGCAAGAACCGAACGTCAATTGGGCAGATGCT
GCTAGTTCCTGCCGAGACGGGGCTGCAATCGCTGCAGCTGACTCTGTTGG
TAGTGGCACTGTCTACCCTCGTGACTTTGGCGATTGTTTGGGTAAGGAGA
GGGGATTTGGGGGATCGCCCAAGATCGAAAAAGGTACCGTAGATTCAAAA
AGATTTCAACGAGTTTTGCTTAGAAAGCGCCGGCCATACTGTGGTGTGTC
GTTAACGGCGACGAACGGGTGCTACGTTTCTGCTAAGAATAGCTCCGGTG
TAAGCCAGCAGAGTCACGCGAATGTATGTCGGCGATCTAGCAAAGCGCTG
CTTCAAATACTGCGTGTGGTGGGGATTGCCAATGCGGCGTTGGTGACAGC
AACGAAGGTGGGATCGATTGAGGGGCCGATCTAACCGGCTGCCGTCTCAT
GAGGTGTCGATGGCGAAGTTCTGGTAAAACCTCAATTAAGCAGCTGCAAT
TAAGTCGTCTTCAATTCACAGCGCACGATAGACGAGATTCCACGCAAGAT
GTCTCATCAGACATTGAAAGC
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Coding sequence (CDS) from alignment at P-fluviatile_contig66:802198..807518+

>mRNA_P-fluviatile_contig66.13249.1 ID=mRNA_P-fluviatile_contig66.13249.1|Name=mRNA_P-fluviatile_contig66.13249.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=2598bp|location=Sequence derived from alignment at P-fluviatile_contig66:802198..807518+ (Porterinema fluviatile SAG_2381)
ATGGAATGGCTAGAGGGAGCGGACGCGAGGGGATACGATAGCATTTCTAC
GCTAGAAGGCAAAAACCTGTCGTTGAGCCATTCGGGGATGGAATGGCTAG
AGGGAGCGGACGCGAGGGGATACGATAGCATTTCTACGCTAGAAGGCAAA
AACCTGTCGTTGAGCCATTCGGGGGGGCGACGGAATGCCGCAGTCCCACC
ACGGTGGGACTCCAGTGACTGCATGGCTAGCTGGGGAGTACCGGAGCTGC
AGACAGAGGGCGATCCGGGGGGATACGTTGTCTTCTCAGAGGGCAGGGGC
GACGGAATGCCGCAGTCCCACCACGGTGGGACTCCAGTGACTGCATGGCT
AGCTGGGGAGTACCGGAGCTGCAGACAGAGGGCGATCCGGGGGGATACGT
TGTCTTCTCAGAGGGCAGGGAGCAACTGGGAAACAACAGGTTTCTGCTGT
CGGATGGTCTCGTCATCGCGAAAGTGCTCAACCGAACCCTCGTAGAGTTT
CCGATGCGGGACTCGAGGATAGCCACCGTGGACGCGGAGCTAGGGTCGTG
TGACTATTGGGACTGCGAAAGCCTGTGCTCGGAGCAACTGGGAAACAACA
GGTTTCTGCTGTCGGATGGTCTCGTCATCGCGAAAGTGCTCAACCGAACC
CTCGTAGAGTTTCCGATGCGGGACTCGAGGATAGCCACCGTGGACGCGGA
GCTAGGGTCGTGTGACTATTGGGACTGCGAAAGCCTGTGCTCGTACCATC
GAATCCTCGACCTCTGGACTTTTCGCTCGATGCTGCGAAAGGGCGTGGTG
CGGGTTGACGAATTTTTCACGGTGCTCTTTGCTGACAAAGAGCAGGCCTT
GCTGCGAAGTCTGATCAGTCCGGAAAACATCACCGACTTTTTCCTCGTTT
ACAACAACTGGCAGGCAAGAGCCAGGATTCGATCTCGATCGGTACCATCG
AATCCTCGACCTCTGGACTTTTCGCTCGATGCTGCGAAAGGGCGTGGTGC
GGGTTGACGAATTTTTCACGGTGCTCTTTGCTGACAAAGAGCAGGCCTTG
CTGCGAAGTCTGATCAGTCCGGAAAACATCACCGACTTTTTCCTCGTTTA
CAACAACTGGCAGGCAAGAGCCAGGATTCGATCTCGATCGGTCATCGAGA
TGAAGATGGCATGGAAAAGCGCGCTCAGACGAGAACCCATCGATCTCCTG
CGACCAAACCCCTTCTACCTCGACTTGGTCGGGAGCTTGATAGATGCACA
GGAGGTCATCGAGATGAAGATGGCATGGAAAAGCGCGCTCAGACGAGAAC
CCATCGATCTCCTGCGACCAAACCCCTTCTACCTCGACTTGGTCGGGAGC
TTGATAGATGCACAGGAGGGTTGGGAAGGCGGGCACTTCATGGCGGTGCA
GTGGCGCACTGAAACAGCGACCGGTAACTTGACGGAGTGCTTCCAGAACT
ACGTCTTCTCGGCTGTGGAAGAGCAGCGCCTGGCGCTAGGCTTCGGTCGA
CATCAGGTGTTCTTCAACACTGATTTGGTTGGGCAGGCGTCCACCACGTA
CAACGCTACGGGTTGGGAAGGCGGGCACTTCATGGCGGTGCAGTGGCGCA
CTGAAACAGCGACCGGTAACTTGACGGAGTGCTTCCAGAACTACGTCTTC
TCGGCTGTGGAAGAGCAGCGCCTGGCGCTAGGCTTCGGTCGACATCAGGT
GTTCTTCAACACTGATTTGGTTGGGCAGGCGTCCACCACGTACAACGCTA
CGGTGGTTTACGCTTACCAAGGCGTAGTGGAAACGATCCGTCAAACGTAC
CCTTTGGCGATGGACAACACAGTTTACGACTGTCTAGCAACCCAGGAGGT
GGTTTACGCTTACCAAGGCGTAGTGGAAACGATCCGTCAAACGTACCCTT
TGGCGATGGACAACACAGTTTACGACTGTCTAGCAACCCAGGAGGACGCC
GGCGTGAAGGCCATGATCAGCGGCTTGGTCTCCGCTTCGGCCGAATTCTT
GCTGTCTTCTTCCTTCAACGGGTCAGGCAGCAGCGCGTGTCAAAAGCCAC
ACTCGAAGTACATTGACCTCATCGCCGAATGGCGGCTAGACGTTATTGGC
AAGAACCGAACGTCAATTGGGCAGATGCTGCTAGTTCCTGCCGAGACGGG
GCTGCAATCGCTGCAGCTGACTCTGTTGGTAGTGGCACTGTCTACCCTCG
TGACTTTGGCGATTGTTTGGGTAAGGAGAGGGGATTTGGGGGATCGCCCA
AGATCGAAAAAGGTACCGTAGGACGCCGGCGTGAAGGCCATGATCAGCGG
CTTGGTCTCCGCTTCGGCCGAATTCTTGCTGTCTTCTTCCTTCAACGGGT
CAGGCAGCAGCGCGTGTCAAAAGCCACACTCGAAGTACATTGACCTCATC
GCCGAATGGCGGCTAGACGTTATTGGCAAGAACCGAACGTCAATTGGGCA
GATGCTGCTAGTTCCTGCCGAGACGGGGCTGCAATCGCTGCAGCTGACTC
TGTTGGTAGTGGCACTGTCTACCCTCGTGACTTTGGCGATTGTTTGGGTA
AGGAGAGGGGATTTGGGGGATCGCCCAAGATCGAAAAAGGTACCGTAG
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