mRNA_P-fluviatile_contig66.13232.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig66.13232.1
Unique NamemRNA_P-fluviatile_contig66.13232.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig66.13232.1 vs. uniprot
Match: D7FTX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX5_ECTSI)

HSP 1 Score: 364 bits (935), Expect = 8.390e-117
Identity = 211/439 (48.06%), Postives = 259/439 (59.00%), Query Frame = 1 
Query:  544 MYRDDASREIDCKIANAQEAAKELQALLDTWNMDSFDHTQTRQALQVVGRLEACHRKSMDRLRKEQDWQREAFIRQSVLRLIGGPNQPHSGLPRSREDPSSSGRSLATDNPLVWQASNAGAVDQKAAKLRARSVRYPGVSDAFFKPSVHLGHVHGGVEDDPWGVSQGLAGSQSIICRRGFVGRPNCSEELPITVVIMPKVGTDYPARERLWRAFLAHRQLLLGGCVMRSLGFADRDPEETLFFFEHIRARRASAVLPRGGLQENDLLFRHWARGALVCLAQLSEQSTYTLEGRVSTANVMIGSQGRIVRLGGLRWGSEIQGVGRATEMAFQRRDTNLCLGLADTLEGLLGLQHFEDRGEDGEHTGEELDATENMKRDVRAGPSLVLVNLLAWLRLPQSSRQGITLKNLLGHQYFAPQCPESVENEVPAAWKSLMDRGKQ 1860
            MYRDDAS  I+ KI+NA E+AK+LQALL  WNM+SF+HTQTRQAL+V+ RLE   RK ++ LRKEQD                                                        ++ AKLR +S+ YPG  +A  K S    H +GG +DDPW VSQGLAG ++I CRRG   RPN +EELP+TVV MPKV T Y ARE+LWRAFLAHRQL LG                                                 RGAL C+AQLSEQST+TLE R+STAN+MIG QG ++RLGGLRWG+EI GVG+ATE A +RRDT+LCLGLA+TLEGLLG    +D  E G       D+ E +  + +   SL+LVN+L+WLRLP  SR+GITLK LLGHQYFAP     VE+E+P+AWK+LMD+GK+
Sbjct:    1 MYRDDASTGIESKISNAHESAKDLQALLHAWNMESFNHTQTRQALKVIHRLEMSRRKGVEGLRKEQD--------------------------------------------------------RQVAKLRVQSISYPGALNASRKHSAT--HGYGGTQDDPWEVSQGLAGREAISCRRGLANRPNSNEELPVTVVAMPKVETGYSAREKLWRAFLAHRQLALG-------------------------------------------------RGALACVAQLSEQSTFTLERRISTANLMIGEQGCVLRLGGLRWGAEIHGVGQATETALRRRDTDLCLGLAETLEGLLGFGRSKDDDETGAEDNNPADSKE-LGSNTQDKMSLMLVNVLSWLRLPAGSREGITLKGLLGHQYFAPLRHTDVESEIPSAWKTLMDQGKE 331
[Close]
BLAST of mRNA_P-fluviatile_contig66.13232.1 vs. uniprot
Match: A0A6H5KMA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMA3_9PHAE)

HSP 1 Score: 87.4 bits (215), Expect = 1.270e-16
Identity = 44/95 (46.32%), Postives = 64/95 (67.37%), Query Frame = 1 
Query: 1582 GLLGLQHFED--RGEDGEHTGEELDATENMKRDVRAGPSLVLVNLLAWLRLPQSSRQGITLKNLLGHQYFAPQCPESVENEVPAAWKSLMDRGKQ 1860
            GLLGL   +D   G +G +  +  +   N +  +    SL+LVN+L+WLRLP  SR+GI+LK LLGHQYFAP     +E+E+P+AW++ MD+GK+
Sbjct:   48 GLLGLGRSKDDETGAEGNNPADSKELGSNAQDKM----SLMLVNVLSWLRLPAGSREGISLKGLLGHQYFAPLRHTDIESEIPSAWRTFMDQGKE 138
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig66.13232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FTX5_ECTSI8.390e-11748.06Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMA3_9PHAE1.270e-1646.32Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig66contigP-fluviatile_contig66:614798..622889 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-07_002750.1
Exons15
Model size2279
Cds size1620
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817075.508904-UTR-P-fluviatile_contig66:614797..6150401622817075.508904-UTR-P-fluviatile_contig66:614797..615040Porterinema fluviatile SAG_2381UTRP-fluviatile_contig66 614798..615040 +
1693571043.5797746-UTR-P-fluviatile_contig66:614797..6150401693571043.5797746-UTR-P-fluviatile_contig66:614797..615040Porterinema fluviatile SAG_2381UTRP-fluviatile_contig66 614798..615040 +
1622817075.6976972-UTR-P-fluviatile_contig66:622473..6228891622817075.6976972-UTR-P-fluviatile_contig66:622473..622889Porterinema fluviatile SAG_2381UTRP-fluviatile_contig66 622474..622889 +
1693571043.7466564-UTR-P-fluviatile_contig66:622473..6228891693571043.7466564-UTR-P-fluviatile_contig66:622473..622889Porterinema fluviatile SAG_2381UTRP-fluviatile_contig66 622474..622889 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817075.519278-CDS-P-fluviatile_contig66:615040..6150951622817075.519278-CDS-P-fluviatile_contig66:615040..615095Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 615041..615095 +
1693571043.5903091-CDS-P-fluviatile_contig66:615040..6150951693571043.5903091-CDS-P-fluviatile_contig66:615040..615095Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 615041..615095 +
1622817075.5322807-CDS-P-fluviatile_contig66:615327..6155231622817075.5322807-CDS-P-fluviatile_contig66:615327..615523Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 615328..615523 +
1693571043.602999-CDS-P-fluviatile_contig66:615327..6155231693571043.602999-CDS-P-fluviatile_contig66:615327..615523Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 615328..615523 +
1622817075.5471506-CDS-P-fluviatile_contig66:615932..6160351622817075.5471506-CDS-P-fluviatile_contig66:615932..616035Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 615933..616035 +
1693571043.6121118-CDS-P-fluviatile_contig66:615932..6160351693571043.6121118-CDS-P-fluviatile_contig66:615932..616035Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 615933..616035 +
1622817075.5634332-CDS-P-fluviatile_contig66:616416..6164911622817075.5634332-CDS-P-fluviatile_contig66:616416..616491Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 616417..616491 +
1693571043.6226842-CDS-P-fluviatile_contig66:616416..6164911693571043.6226842-CDS-P-fluviatile_contig66:616416..616491Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 616417..616491 +
1622817075.5738394-CDS-P-fluviatile_contig66:616802..6168801622817075.5738394-CDS-P-fluviatile_contig66:616802..616880Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 616803..616880 +
1693571043.6332855-CDS-P-fluviatile_contig66:616802..6168801693571043.6332855-CDS-P-fluviatile_contig66:616802..616880Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 616803..616880 +
1622817075.5844572-CDS-P-fluviatile_contig66:617396..6175641622817075.5844572-CDS-P-fluviatile_contig66:617396..617564Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 617397..617564 +
1693571043.6447835-CDS-P-fluviatile_contig66:617396..6175641693571043.6447835-CDS-P-fluviatile_contig66:617396..617564Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 617397..617564 +
1622817075.5945687-CDS-P-fluviatile_contig66:618016..6181051622817075.5945687-CDS-P-fluviatile_contig66:618016..618105Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 618017..618105 +
1693571043.653727-CDS-P-fluviatile_contig66:618016..6181051693571043.653727-CDS-P-fluviatile_contig66:618016..618105Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 618017..618105 +
1622817075.6042824-CDS-P-fluviatile_contig66:618341..6184741622817075.6042824-CDS-P-fluviatile_contig66:618341..618474Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 618342..618474 +
1693571043.6626952-CDS-P-fluviatile_contig66:618341..6184741693571043.6626952-CDS-P-fluviatile_contig66:618341..618474Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 618342..618474 +
1622817075.6172647-CDS-P-fluviatile_contig66:618924..6189981622817075.6172647-CDS-P-fluviatile_contig66:618924..618998Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 618925..618998 +
1693571043.6723936-CDS-P-fluviatile_contig66:618924..6189981693571043.6723936-CDS-P-fluviatile_contig66:618924..618998Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 618925..618998 +
1622817075.630144-CDS-P-fluviatile_contig66:619367..6194451622817075.630144-CDS-P-fluviatile_contig66:619367..619445Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 619368..619445 +
1693571043.684692-CDS-P-fluviatile_contig66:619367..6194451693571043.684692-CDS-P-fluviatile_contig66:619367..619445Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 619368..619445 +
1622817075.6414747-CDS-P-fluviatile_contig66:619930..6199991622817075.6414747-CDS-P-fluviatile_contig66:619930..619999Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 619931..619999 +
1693571043.698081-CDS-P-fluviatile_contig66:619930..6199991693571043.698081-CDS-P-fluviatile_contig66:619930..619999Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 619931..619999 +
1622817075.653368-CDS-P-fluviatile_contig66:620525..6206191622817075.653368-CDS-P-fluviatile_contig66:620525..620619Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 620526..620619 +
1693571043.7111044-CDS-P-fluviatile_contig66:620525..6206191693571043.7111044-CDS-P-fluviatile_contig66:620525..620619Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 620526..620619 +
1622817075.6668284-CDS-P-fluviatile_contig66:621285..6214111622817075.6668284-CDS-P-fluviatile_contig66:621285..621411Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 621286..621411 +
1693571043.7190404-CDS-P-fluviatile_contig66:621285..6214111693571043.7190404-CDS-P-fluviatile_contig66:621285..621411Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 621286..621411 +
1622817075.6769884-CDS-P-fluviatile_contig66:621767..6219281622817075.6769884-CDS-P-fluviatile_contig66:621767..621928Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 621768..621928 +
1693571043.7285836-CDS-P-fluviatile_contig66:621767..6219281693571043.7285836-CDS-P-fluviatile_contig66:621767..621928Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 621768..621928 +
1622817075.6870718-CDS-P-fluviatile_contig66:622352..6224731622817075.6870718-CDS-P-fluviatile_contig66:622352..622473Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 622353..622473 +
1693571043.7363088-CDS-P-fluviatile_contig66:622352..6224731693571043.7363088-CDS-P-fluviatile_contig66:622352..622473Porterinema fluviatile SAG_2381CDSP-fluviatile_contig66 622353..622473 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig66.13232.1prot_P-fluviatile_contig66.13232.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig66 615041..622473 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig66.13232.1

>prot_P-fluviatile_contig66.13232.1 ID=prot_P-fluviatile_contig66.13232.1|Name=mRNA_P-fluviatile_contig66.13232.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=540bp
MGAEVDPLFELFKAACLSGPVTADSKEEARGCEAENLRITSESQWQTFAN
SLAAEGLVIELNEQQQLQRLWERAVAGANSFGRKGKPSVSMRDVHCCVDE
MYRDDASREIDCKIANAQEAAKELQALLDTWNMDSFDHTQTRQALQVVGR
LEACHRKSMDRLRKEQDWQREAFIRQSVLRLIGGPNQPHSGLPRSREDPS
SSGRSLATDNPLVWQASNAGAVDQKAAKLRARSVRYPGVSDAFFKPSVHL
GHVHGGVEDDPWGVSQGLAGSQSIICRRGFVGRPNCSEELPITVVIMPKV
GTDYPARERLWRAFLAHRQLLLGGCVMRSLGFADRDPEETLFFFEHIRAR
RASAVLPRGGLQENDLLFRHWARGALVCLAQLSEQSTYTLEGRVSTANVM
IGSQGRIVRLGGLRWGSEIQGVGRATEMAFQRRDTNLCLGLADTLEGLLG
LQHFEDRGEDGEHTGEELDATENMKRDVRAGPSLVLVNLLAWLRLPQSSR
QGITLKNLLGHQYFAPQCPESVENEVPAAWKSLMDRGKQ*
back to top

mRNA from alignment at P-fluviatile_contig66:614798..622889+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig66.13232.1 ID=mRNA_P-fluviatile_contig66.13232.1|Name=mRNA_P-fluviatile_contig66.13232.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8092bp|location=Sequence derived from alignment at P-fluviatile_contig66:614798..622889+ (Porterinema fluviatile SAG_2381)
GCTGTGTGGAGCATTAGTTGAGTAGTAACGCGATCTTGGCAAGATCGCAC
ATTCACGGGTCTTTGTTCTATTCTAAATACTGTAGTCTAGACTATCAAAT
TGCTGGCGGGTGCCACCCTAGTGTATCCCCAACACCTTAAAGTGGTTGTT
CACGTTGCGTTTGTAATCCAGCTCTTTCGATGTTGCCCCGTGATATCTAG
ATCAGAGCTAGCCGCCTCGCTCTGGGACACGGCTGGGACAGCCATGGGCG
CAGAAGTTGACCCGCTCTTCGAACTCTTCAAGGCAGCCTGCTTGTCCGGT
GCGTGAGTTTAAGTGCCACAACGAACAATACTCGGCCACAACGAACTATC
TAGTCTATGCCCATACTTGTCACACTGATGATGGCCACATCTTTCTTTTA
AGCTCAACGAAACCGCCCCACCAGTCACAACCCACAGCAATACATCCATT
TGGCTTCCTCCGCCGTCGTGTTCTGGTTCCAGATGGAGCGTCAACCACTT
GTCCATGCTCCTCGCCCTTGTCACATCTAGGCCCAGTCACCGCCGACTCC
AAAGAAGAGGCGCGCGGCTGCGAAGCAGAAAATCTTCGCATCACGTCCGA
GAGTCAGTGGCAAACCTTCGCGAACTCGCTTGCAGCTGAGGGGCTGGTCA
TTGAGCTAAACGAGCAACAACAGCTGCAGAGGCTGTGGGAACGTGCGGTT
GCCGGGGCAAACTCATTCGGCAGAAAGTGGGCACGCACCCTGACATATTG
AACTATCTTATGAAAGGAACACCAGAAGAGATACTGCCGAATGTTGACTC
GTATGCTGCAATGGTCTAAGTTGTTCTCAGCCCGGAAGTCTCCAGCATTG
TAGGCAAACAATCGAGGCGGCGTTTAAGCTTGAGGGCCATCAACTGAAAT
ATGATGATGTTGTAAACTGGAGATAATGTGGAACTATATATCTATACACT
AACTCGCCTGAATGGGACTTGACGGGTAAATGACGTCGGTGAAATCTTAT
GTGAGAGTGTCATCGTACACCTGTTCTCAGTATACGGGTGCCGGTTGTTA
CAATCACAATCAGTATGTGATACGAATGATTCGTCACAATAAAACACGAT
CTCCGGTCTTGATCGTCAACCGCGTGATTCCATAGAGGAAAGCCTTCTGT
CAGCATGCGCGACGTCCACTGCTGCGTAGACGAGATGTACCGAGACGACG
CTTCGAGAGAAATCGACTGCAAGATCGCCAATGCACAGGTGACCGTTGTA
GCGTAACGACATGCGCAAGGAGCAAAATAAATCGACTTTGTACCTGCAGC
GGTCCAACTCACAACTGAACGGTGAATCCAATATGCTCCTTGCGTTCTTT
CGATATGTTACCTTCGGTCGCGTAGAAGGGTGTGTCCTCGAGGTAGGGCC
AGCGGCGGAAATTTCAGCACACCCGACCGACAGTCGCTGACGGCACTGAG
CTCGAAGCAGCCGTATCTTGGCAAGATGAGCTTTTGGGCGAATGCTCGAG
GAGGTTCTCAACAGGCACTGAATCAAGCAGATGCGCAGCATGTCTCAATC
GCTTTTACACTTATGCGATGAGACAAGAATTCTGACTTCGATCAAATGGC
TTCTCCTTACAATCCGCAGGAAGCCGCAAAAGAGCTCCAAGCGCTTCTTG
ACACTTGGAACATGGACTCTTTCGACCACACGCAGACCAGACAGGTATTG
CATAGCGTAAGAGGAAATAACTTCAATGTTTCATCGGGTTACGCTGGTTG
GACCGCACCAAAGTAGTGCTTCGCTGATGGACACCAGTGGGGAAACGGTG
AACCAACAAGCTGGTTCCGAACATGTTCCGACTACTAGGCACCCACTGAA
GATGATTGGCATCATGAGCGAGGAGCACGCCCGACCACGTGGCACACGAA
GGTGTATGGCGTAGCTTCAGGCGGTAGTCCTGCACCTCAGTTGTTTCGGG
GCCTCCTACATATTCTTTGTTGTGCACAACGCCTTCGATGTGGTCTTTTG
CGAAGGCCCTCCAGGTCGTCGGCAGGCTGGAGGCTTGTCACCGCAAGAGC
ATGGATCGCCTTCGCAAGGAACAGGACTGGCAGGTGCGATTCTCGCTGGA
TCTGTGCGACGCCTGCAGTCAAGTCCACAGCCCCAAGATTAGTCTGCTGC
CATACCCCTAGCTTTGCGATTAGCCAGAAGTAATGAGTGCAAATAGAGTG
CACCTGAGAGAACGCTTGATCGAAAGTGCGCCGATAATGTGAAAGCCTTC
ACTACGACCTGCACAGGAACACAGGCATTTCCAGAATTTGAACGCCATGG
CAATATTCCGTGGCTGCTGTACGAGCGGGTCTCTTGCCTATTTTTTGCTC
CGTTTCTCCTCAGAGTGGGGAAATAGTCGTGCCGTGTTCGAAAGACGTCT
TGCTGGCTAGCCCCACGGCTACATGCGCCACTTTAATCTCGCGCCAAAGT
CGGCCAACCGCAAAAAACAGCAGCTTCAAAAGGGTGGCGATTACCCCATC
AGTCGACATCATTGGGTGGGCTCTCGTTTGATGACCCCGTTGAGCGTGCG
AGCCGACCCGAGAGACCACTTTCGCGTTGACACGCCCATTTGTGAACAGA
GAGAGGCTTTCATAAGACAGAGTGTGCTGCGGCTGATAGGAGGCCCCAAT
CAGCCACACTCAGGACTGCCACGGAGCCGAGAGGACCCGAGTTCGAGCGG
AAGGAGTCTCGCCACCGACAACCCTCTTGTGTGGCAGGCCTCAAACGCCG
GCGCGGTGGATCAAAAGGTGAGTAGGAAAATCGCAGCAGGTGGGTTTTTG
CGCACAGGCGTGCACTCAACACCTTTAGGTTTGACGACGCACTTCGCAAG
CTGTCAAACATACCCTATGCCAGTCGTGCCTTCATGTTGTTCGAGTGCTG
TCGCCGTCCCATCTCCCGAAGGCTAGAAGCGAACCTGGGCGACACCGAAC
CGATTGGGCGAGAATTTCCAGCAGAACAACGAGTTTGACCCGTCATTAAT
GAGTTGGAGCGACAGCCGCTTGAGTTGTCGGCTCGAGGCGCGAAATTACC
ATCCACAGCCGAACAACCGCCAGCATTCGATTGAAACAAACGGTTCGGGG
GTAAGGGCGTTGTCCAATCGGCGAAAACAGTCCACCGATGAGCCTCAGAC
ATGTCGTCAGCGACGTAAGCCGCAGAATCAAACACTATTCCATTCAAGCC
GCGTTTGCTGGCGTGGCAGGCGGCAAAGCTGAGAGCCCGATCCGTGCGCT
ACCCTGGAGTGTCAGACGCGTTTTTCAAGCCGTCCGTCCACCTTGGTCAC
GTTCACGGGTGAGCCGGAAACCAGTAGGCGATGCAACGAACACCATGGAA
GTGTCGTGGCTGCATTCGTGTGCTGTAGGATGAAGTCTTTGTGAAATACC
CATTCCCTGAACCTTTGCGCGATGGGCCCGCGCATGTACCTTGTGCAACT
CCAGGCGTGTCTCACCTTCTTGACTTTCTCCTTCACGACAACCATCGAGC
TGAGTTTGGGCACACGTATTATTCACGCCGTTCTCCGAGGACAGGGGCGT
CGAAGACGATCCATGGGGAGTCTCTCAAGGGCTTGCGGGTAGTCAATCGA
TCATCTGCAGAAGAGGGTTCGTCGGCCGACCCAACTGCAGCGAAGAGCTG
CCTATTACAGTAGTAATCATGCCAAAGGTGGGTGTTCGTGACCGATTTTT
CGATCTGGTCGATGTCACGCTCATCTGGAGGTTCCATGGCGTGAAAAAAC
TGTCCTGGTGCGTATTGCTGCCAGTTTTGTTGGGGATTCGTCATCGTGTG
GTTCGCGCTTTGGCTGATGGTCAACCTCAAGGGAGGCAAACCCCGCGGTG
GCAATCATTGCGTCAGGCATTGCCATTGTTTGGCCGTCAAAGCGTGATTC
CAAGAGATAATTGTTGTGCTCGTATACAAGTATACGTTTCTCGTCGGATC
CACTCGTCGTACACGCTCACAAACCTGCTTTGATCGGTGATCGGCGCGAC
ACACAAGTTGAGCGAACGAGGTTGTCGTTAGCAGGATGTTTTGGGGTCGA
CCCTCTCCCCAAGGGCCTCTAGTTCTAACAATGGTCGGTAATCTGCATGT
TATTTCGGTGCGGTAACGTACTCCCAGGTAGGAACGGACTACCCAGCGAG
AGAGAGGTTGTGGAGGGCTTTCCTTGCCCACCGGCAACTGCTACTCGGCG
GGTGAGCGAAAACTCATGAAGACCTAGCAATTCTGTTTAAAACCCAAAAA
GCGGCGTCTCATTCTCGACACCATCGTTTTTCCGCGACCAAAACGTCAAC
AATCATCAGCAAGAGTGGATTCGTCGAGGATTCAAGAGCTTCGGCATGCG
CTAGATGGCGCGCAGTTTTTCTGCAGAACTTACACCCCAAGGTCTGTTGA
AACGACTCCCGGGGTAAGTGAAGAGATGGACCCCCGAGGCTCCTTGATAC
CCTCAGCTGCTTCAGACACGGCCAAACGGAGCTGCTGCAGCCGGAGGACC
ACCGCCATACAAATTGCTTTCACGCCAGTCGTTTTCCCTGCAATATTCTC
GCGTCGGTTTTGCTTGGCAGGTGTGTGATGCGTTCCCTGGGCTTCGCAGA
TCGCGACCCGGAGGAGACGCTTTTTTTCTTCGAGCACATCAGGGCCAGGT
GCGTGCTGATGGTCGTGAGTTTGTGTCATTACGCCGGCCGTCGTTGTCCA
TGTTGCACGCCAGTCAAACGTAGCGCTACTTGTCCATCCACAGGGTACAT
TCAGACGCGCCCGTCCCATGCTACGGCTTTTGATACCAGCTTCATCGATC
AATGGACCCCATCTCCAGCGATTGTCTATCCAGGCCCTGCCTGCCAAGAA
TCGGCGCAACGGGAACACCTACGAGTCAAGGCGAATACGATTCATGTATT
TTGAATGTGCCCTGCAACAGCAAGGGTTTCGCGTGAGCGGTCAAGACTGG
AAGGCGGGGAGGCCATCACAAATTTTGGCGCAGAGCCTGATAGACCTAGG
TGTCTCATGCCGAGTATTGTTCTCGTTCTGTGCATCGGCAGTTGCGGCGG
ACACACGCTACCTGAGACCCGCCTTCTCGCGCATTTTCCATCGCGTTCTG
CCCAACCTCAAATCGTGCACCTATGCCACGCAGGCGGGCCTCTGCCGTGC
TTCCACGTGGGGGGCTGCAAGAGAACGACTTGCTTTTTCGGCATTGGGCC
AGGTGATCACAAACACAGGGGGGATTGTTGCCGCTGCGTCCATTTATCGT
ATGCGAGACCCCGGGATAGTTTAAAGGGCCCGGGGTCTAAACTAGGCCAT
CGACGAAATAGCATATATGTTGGTCATTTGTCAACGGGGGGGTGGTCATG
AAGCATCCGTTGGATGGTGTGCCTTGCTCTGCACGCCTTTGGGTGAAGTC
TGCCGACAAAGATGCTGCCGCTCGTCGAGGAACATTTCGCACACGACTGT
TGCGGGGCATGCAGGGGATGGCGCCTGCATTGCGCTCTGCGAAAAATCAG
TCGTAGCCGAAATGCTGCCGCATTGCACGTCCGAAGGCAGTTAGGCCCCA
GCACGTTCGTCCTTTCTGTTCTCATGGGGGGCAGCGCTGCCCCTCATGCG
CTTGGGCAATGTCTGCTGTAAAAGGCGTGCATATTATTCTCACGGACAAT
ATTCAAGGACTCTTGAAGCGACAACGAACGTCATCACTTGAACGTTTCCT
GCTGCCTTGTCTGCCTCGAGAACTCCAGGGGTGCTCTCGTTTGCCTGGCC
CAATTGTCGGAACAAAGCACATATACTTTGGAAGGGCGGGTTTCGACGGC
CAACGTAATGATAGGTTCACAGGTGCGTGAAAAACCATTCGCTTGCGCCG
GCGGAGGATTTACGACGGTTGGTCGACGAAAATCTCGACACAAAACTTGG
TGTTCGGTATCCAATCTCCGGAGAGTTTTCTTCCCATGCGTTGTCCAAAG
TGACGAAGGATTAGTGCAAACTGTATTCTTCTGGCGTTAGATAAACGGCA
GCGTGTGGTTCCAGCGCGTTACGCAAAAAAAGAGCGATTCACCAAGCAAG
GCGTCAGTTGTGGGTGCATAGTCTGTTGTTAGAGCGTGGGGCGTCAAGGC
GTTGTTTCGTTTTGCGAAGTAATTGTCTCACTCGCTGTGCGGAGGGTTAG
TGTATTCCAGAGCGAAGAGAGGTCCCCCTCTCATTCGCCCATGTGTGGCC
GCGTGGTCAATGCTCTAACCGCCAAGGCATGCACAAAACAATAGTACGCC
CGCCCCCCCCCCCCCTCGTTCGCCTACTGTTGGCCGGTTCACGACGCAGC
CAACGGTGCCATTGCTATGATTGCCTACATTCGTCGACTGCGAATATCAT
TAAACTAAGCTCTCGAAGATTCAACGCGAGCATTGCATCCATTTAAAAAG
TAATTCTTATCCACGGTGGCGCTACAGTGTCAATATCCTCTTCATTCAAT
CCATTGCTGCAAACACCCATCGACGGCGACATGCAAAGGGGCGTATAGTG
CGATTGGGTGGCCTTCGCTGGGGATCTGAAATCCAGGGTGTGGGACGAGC
CACGGAGATGGCGTTCCAACGAAGAGACACTAATCTCTGCCTTGGACTCG
CAGATACGCTTGAGGTGAGCAAGGCATGCGCTCCCTCATGTCGGGTACCG
CGCCGAATCCGGGCACTTAGTCTATTTCTTGTGTTTCTCAGCTTCGAAGG
CGACCACATGTCGGCAGCACAAGCGGTTGTGTCGGTCTGAGGCTTTTCAG
CATTCCGTTTCGATTTGTAGTTTCGGTCTTGTTCACAAGTAAAGGGAAAC
GATTTCATCCCACGCTTAAGCTCATGCAAAGTTCAAGATGGGCGATCAGC
CGGATCTCAAGAAAATCACCCGCCATAAATTTCGCACTCGCTGGTGGACC
GCCCTCAGAACTCGTAGTGTGTAGTGTTGTATCACTTTGGTAGCCCAATC
TTATTTTTTTGGCGCTTTAGGGTCTGCTGGGCCTTCAGCATTTCGAGGAC
AGGGGCGAGGATGGAGAACATACCGGGGAGGAGCTGGACGCCACCGAAAA
TATGAAACGCGATGTTCGAGCTGGACCGTCACTAGTGCTCGTCAACCTTT
TGGCTTGGCTTCGGCTCCCCCAATCGTCCAGGTACGGCGCGTTGTTTAGA
TAGGAAGGCTAAAAAGTTGAGCGGGGCGGAACGCTCCAGAATTCAGTCCT
AGCTTCACCATACGGTGCCACCTACTCCCCGTGACCCCGTCCCACTCCCT
GCGTGGGCGTTCGTCCGCACATCAGTTTCAGAGAGATCAGTCGCTTTTTG
TACTTGTATTCAAGAGACCAATTGTAGGGCGTCACAACCGGAGAAAAGAG
AGGATTTCAAACCGATGTACTAAAAATAAATACTCTGGAGTACTAGTGTT
TCGGAGCTGTCTTGTCTGTCATGAAATCGCGGAATGCCTGTCAAACTTCG
AAACCGCGTTGTTTTCCAACTGCCCTGAAACGAAAGATGCGCTGGAATTG
CAGCAGGCCTCGCCCTCCCCGAATCCGTCGTCCTGAAAAAAAAAAACGAA
CACAGGCAAGGGATAACCTTGAAGAATCTCCTCGGGCACCAGTACTTTGC
GCCGCAATGCCCCGAGAGCGTTGAGAACGAAGTACCGGCTGCGTGGAAGA
GCTTGATGGACCGAGGGAAACAATAAGAAGGCACAGGCGCTTGGGCGAAA
AGATGGATGAGTTCCTCCAGCCAAGAGGGATGTCCACGTGCGACTTCGGT
TATCCCTTGAAGCGGGAGGCGTGTTTCTCTCGTCCTGGTGCTATCTTGCG
AGACTTTTCGTGCGCATAATCGAACTAAAGTCGTGGCTTTTTGTGGAAGG
GGGAGGTGGTGCATGGTTGTCCCTCCGGAAAGACCGCATAAAGTACGTCG
AGACCTCACGAAAAGGACGCAGATGCGTTTTCGCGCAGTCTATAGTGAGC
AGTCTCCATATGGAGAGATGAAAACCAAACACAGGTGGTTAATGTGCAGA
GATAACGGTTTCAGACCTTCGAGGGGTCCTTCTGACCTAAACGAAAGCAT
ACGACATTAACGTGTCAATCGCGCTTGCAGTTGAAAAATATG
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig66:614798..622889+

>mRNA_P-fluviatile_contig66.13232.1 ID=mRNA_P-fluviatile_contig66.13232.1|Name=mRNA_P-fluviatile_contig66.13232.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3240bp|location=Sequence derived from alignment at P-fluviatile_contig66:614798..622889+ (Porterinema fluviatile SAG_2381)
ATGGGCGCAGAAGTTGACCCGCTCTTCGAACTCTTCAAGGCAGCCTGCTT
GTCCGATGGGCGCAGAAGTTGACCCGCTCTTCGAACTCTTCAAGGCAGCC
TGCTTGTCCGGCCCAGTCACCGCCGACTCCAAAGAAGAGGCGCGCGGCTG
CGAAGCAGAAAATCTTCGCATCACGTCCGAGAGTCAGTGGCAAACCTTCG
CGAACTCGCTTGCAGCTGAGGGGCTGGTCATTGAGCTAAACGAGCAACAA
CAGCTGCAGAGGCTGTGGGAACGTGCGGTTGCCGGGGCAAACTCATTCGG
CAGAAAGCCCAGTCACCGCCGACTCCAAAGAAGAGGCGCGCGGCTGCGAA
GCAGAAAATCTTCGCATCACGTCCGAGAGTCAGTGGCAAACCTTCGCGAA
CTCGCTTGCAGCTGAGGGGCTGGTCATTGAGCTAAACGAGCAACAACAGC
TGCAGAGGCTGTGGGAACGTGCGGTTGCCGGGGCAAACTCATTCGGCAGA
AAAGGAAAGCCTTCTGTCAGCATGCGCGACGTCCACTGCTGCGTAGACGA
GATGTACCGAGACGACGCTTCGAGAGAAATCGACTGCAAGATCGCCAATG
CACAGAGGAAAGCCTTCTGTCAGCATGCGCGACGTCCACTGCTGCGTAGA
CGAGATGTACCGAGACGACGCTTCGAGAGAAATCGACTGCAAGATCGCCA
ATGCACAGGAAGCCGCAAAAGAGCTCCAAGCGCTTCTTGACACTTGGAAC
ATGGACTCTTTCGACCACACGCAGACCAGACAGGAAGCCGCAAAAGAGCT
CCAAGCGCTTCTTGACACTTGGAACATGGACTCTTTCGACCACACGCAGA
CCAGACAGGCCCTCCAGGTCGTCGGCAGGCTGGAGGCTTGTCACCGCAAG
AGCATGGATCGCCTTCGCAAGGAACAGGACTGGCAGGCCCTCCAGGTCGT
CGGCAGGCTGGAGGCTTGTCACCGCAAGAGCATGGATCGCCTTCGCAAGG
AACAGGACTGGCAGAGAGAGGCTTTCATAAGACAGAGTGTGCTGCGGCTG
ATAGGAGGCCCCAATCAGCCACACTCAGGACTGCCACGGAGCCGAGAGGA
CCCGAGTTCGAGCGGAAGGAGTCTCGCCACCGACAACCCTCTTGTGTGGC
AGGCCTCAAACGCCGGCGCGGTGGATCAAAAGAGAGAGGCTTTCATAAGA
CAGAGTGTGCTGCGGCTGATAGGAGGCCCCAATCAGCCACACTCAGGACT
GCCACGGAGCCGAGAGGACCCGAGTTCGAGCGGAAGGAGTCTCGCCACCG
ACAACCCTCTTGTGTGGCAGGCCTCAAACGCCGGCGCGGTGGATCAAAAG
GCGGCAAAGCTGAGAGCCCGATCCGTGCGCTACCCTGGAGTGTCAGACGC
GTTTTTCAAGCCGTCCGTCCACCTTGGTCACGTTCACGGGCGGCAAAGCT
GAGAGCCCGATCCGTGCGCTACCCTGGAGTGTCAGACGCGTTTTTCAAGC
CGTCCGTCCACCTTGGTCACGTTCACGGGGGCGTCGAAGACGATCCATGG
GGAGTCTCTCAAGGGCTTGCGGGTAGTCAATCGATCATCTGCAGAAGAGG
GTTCGTCGGCCGACCCAACTGCAGCGAAGAGCTGCCTATTACAGTAGTAA
TCATGCCAAAGGGGCGTCGAAGACGATCCATGGGGAGTCTCTCAAGGGCT
TGCGGGTAGTCAATCGATCATCTGCAGAAGAGGGTTCGTCGGCCGACCCA
ACTGCAGCGAAGAGCTGCCTATTACAGTAGTAATCATGCCAAAGGTAGGA
ACGGACTACCCAGCGAGAGAGAGGTTGTGGAGGGCTTTCCTTGCCCACCG
GCAACTGCTACTCGGCGGGTAGGAACGGACTACCCAGCGAGAGAGAGGTT
GTGGAGGGCTTTCCTTGCCCACCGGCAACTGCTACTCGGCGGGTGTGTGA
TGCGTTCCCTGGGCTTCGCAGATCGCGACCCGGAGGAGACGCTTTTTTTC
TTCGAGCACATCAGGGCCAGGTGTGTGATGCGTTCCCTGGGCTTCGCAGA
TCGCGACCCGGAGGAGACGCTTTTTTTCTTCGAGCACATCAGGGCCAGGC
GGGCCTCTGCCGTGCTTCCACGTGGGGGGCTGCAAGAGAACGACTTGCTT
TTTCGGCATTGGGCCAGGCGGGCCTCTGCCGTGCTTCCACGTGGGGGGCT
GCAAGAGAACGACTTGCTTTTTCGGCATTGGGCCAGGGGTGCTCTCGTTT
GCCTGGCCCAATTGTCGGAACAAAGCACATATACTTTGGAAGGGCGGGTT
TCGACGGCCAACGTAATGATAGGTTCACAGGGGTGCTCTCGTTTGCCTGG
CCCAATTGTCGGAACAAAGCACATATACTTTGGAAGGGCGGGTTTCGACG
GCCAACGTAATGATAGGTTCACAGGGGCGTATAGTGCGATTGGGTGGCCT
TCGCTGGGGATCTGAAATCCAGGGTGTGGGACGAGCCACGGAGATGGCGT
TCCAACGAAGAGACACTAATCTCTGCCTTGGACTCGCAGATACGCTTGAG
GGGCGTATAGTGCGATTGGGTGGCCTTCGCTGGGGATCTGAAATCCAGGG
TGTGGGACGAGCCACGGAGATGGCGTTCCAACGAAGAGACACTAATCTCT
GCCTTGGACTCGCAGATACGCTTGAGGGTCTGCTGGGCCTTCAGCATTTC
GAGGACAGGGGCGAGGATGGAGAACATACCGGGGAGGAGCTGGACGCCAC
CGAAAATATGAAACGCGATGTTCGAGCTGGACCGTCACTAGTGCTCGTCA
ACCTTTTGGCTTGGCTTCGGCTCCCCCAATCGTCCAGGGTCTGCTGGGCC
TTCAGCATTTCGAGGACAGGGGCGAGGATGGAGAACATACCGGGGAGGAG
CTGGACGCCACCGAAAATATGAAACGCGATGTTCGAGCTGGACCGTCACT
AGTGCTCGTCAACCTTTTGGCTTGGCTTCGGCTCCCCCAATCGTCCAGGC
AAGGGATAACCTTGAAGAATCTCCTCGGGCACCAGTACTTTGCGCCGCAA
TGCCCCGAGAGCGTTGAGAACGAAGTACCGGCTGCGTGGAAGAGCTTGAT
GGACCGAGGGAAACAATAAGCAAGGGATAACCTTGAAGAATCTCCTCGGG
CACCAGTACTTTGCGCCGCAATGCCCCGAGAGCGTTGAGAACGAAGTACC
GGCTGCGTGGAAGAGCTTGATGGACCGAGGGAAACAATAA
back to top