mRNA_P-fluviatile_contig66.13197.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig66.13197.1 vs. uniprot
Match: A0A6H5L0W0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0W0_9PHAE) HSP 1 Score: 524 bits (1349), Expect = 6.830e-178 Identity = 276/486 (56.79%), Postives = 352/486 (72.43%), Query Frame = 2
Query: 98 MSTTSASAG--WYDNIAVYSSDYVPATFDAGNSVKLNHDLLGGLRDNGFEITKHGYTVGLLTLFLVFIISGLLACVLLPLSYKALGTSRQERLRNRMKFGRSRHIGGNLVMVMGSLVAVAAAIGGVWGLQRADSGLTTIESTTQEVASDLLSVLSLPNDTTVALTRISTTYGLVRDGVGGCGNISVSAFLGSVLDEFDPASLTDDVQAEIDNLDAQSLDQLATDVQGISDAVARTEGARKGVVWPILVLALAFTILFVLFGVGSYECVAFGISHSHKVTRCVPPCTVFVAVVVWLSAASAVTLSALTGDFCIDPDGNTNTLISDGQ--QLGQLVTYYTTDCTTRNDAVDVIIASQAAAVPAIQGIVPVLYGVADICDELLEPVRAVDVALRELWIVLENAAQLSSCENLNSLYQTAVYNELCKDLPRGLLGFWVSSSLLTVLLLILVVQWKRMIAQQTTEGDAETVEAMNRRRAHRLNVFSMRYSK 1543
M+TTS + G WYD I+VYSSDY PATF G SV+ NHDLL GLR+N F++ Y+ GL+TL +VF+++GLL LGTSRQERLR RMKFG+ H GGN++MV+ S+ A+A+A G +WGLQRADSGLT IE TQ +A+D+L++L+L NDT+VAL +++ +Y +++ V GC N A L S+LD FD SLT VQAEID++ + +LA DVQ ISDAV+ TEGARKG++WP+L+L+L FT FV V +YECVAFG + C+ PCT+FVAVV+W+ AA AV+LSALTGDFCIDPD N N LI+D ++ L+TYYT DCT+ N AVD II +Q AVP IQ +VP LY + C +L EPV+ +D +L W +LE+A +LSSCENLN LYQ AVY+ELCK LP+GLLGFWVS + LTVLLLIL +QW RM+ QQTTE DA T EAMNR+RA L V S R+S+
Sbjct: 1 MTTTSTTGGDAWYDKISVYSSDYEPATFTPGPSVEANHDLLDGLRENDFDVEDAQYSAGLVTLIIVFLVAGLLXXXXXXXXXXXLGTSRQERLRERMKFGKQTHYGGNILMVLASVAAIASAAGAIWGLQRADSGLTNIEDATQNMATDMLTILNLANDTSVALDQVTASYEALQESVDGCDN---GAILSSLLDAFDINSLTASVQAEIDDVSEDNFGELADDVQAISDAVSDTEGARKGLLWPVLILSLMFTAFFVAVSVSTYECVAFGYRDCAPASCCINPCTIFVAVVIWICAALAVSLSALTGDFCIDPDANANELITDNTDGEIADLITYYTGDCTSENAAVDAIITAQEVAVPIIQSVVPTLYQLEAACSDLAEPVQTLDNSLESFWTILEDAGELSSCENLNGLYQAAVYDELCKGLPQGLLGFWVSCAFLTVLLLILAIQWGRMLRQQTTEEDASTAEAMNRQRAGWL-VVSKRFSR 482
BLAST of mRNA_P-fluviatile_contig66.13197.1 vs. uniprot
Match: D7FQM7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQM7_ECTSI) HSP 1 Score: 159 bits (402), Expect = 4.520e-40 Identity = 102/254 (40.16%), Postives = 145/254 (57.09%), Query Frame = 2
Query: 263 VGLLTLFLVFIISGLLACVLLPLSYKALGTSRQERLRNRMKFGRSRHIGGNLVMVMGSLVAVAAAIGGVWGLQRADSGLTTIESTTQEVASDLLSVLSLPNDTTVALTRISTTYGLVRDGVGGCGNISVSAFLGSVLDEFDPASLTDDVQAEIDNLDAQSLDQLATDVQGISDAVARTEGARKGVVWPILVLALAFTILFVLFGVGSYECVAFGISHSHKVTRCVPPCT-------VFVAVVVWLSAASAVTLS 1003
+GLLTL +F+ +GLLAC +LP Y SRQ L R++ G RH G L+MV+ S A+A + GL++ADSG+ IE T+ +A D+L ++ LP DT V L +S +Y ++ VG C N ++ +++ D SL +VQ ID +D SL +A VQ ISDA+ T+ R+ +VWP ++LAL F LF+L +YE VA C PCT VF+AVVV+L AAS ++LS
Sbjct: 6 LGLLTLASIFVAAGLLACAVLPCLYCCFRKSRQAHLVTRLENGPHRHCAGGLLMVLVSWAALACCSSAIAGLEKADSGMLVIEDRTEAIAKDVLEIIGLPADTAVGLGLVSDSYDVLEASVGDCENPDIAQ---AIVAGLDFGSLASEVQTAIDEIDRTSLADIAKQVQDISDAMYTTKVLRRTIVWPTIILALVFVALFILISCTTYEAVA------CARPSCRAPCTGGFAPFVVFLAVVVYLCAASVISLS 250 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig66.13197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig66.13197.1 >prot_P-fluviatile_contig66.13197.1 ID=prot_P-fluviatile_contig66.13197.1|Name=mRNA_P-fluviatile_contig66.13197.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=537bp MSTTSASAGWYDNIAVYSSDYVPATFDAGNSVKLNHDLLGGLRDNGFEITback to top mRNA from alignment at P-fluviatile_contig66:269914..277255+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig66.13197.1 ID=mRNA_P-fluviatile_contig66.13197.1|Name=mRNA_P-fluviatile_contig66.13197.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=7342bp|location=Sequence derived from alignment at P-fluviatile_contig66:269914..277255+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig66:269914..277255+ >mRNA_P-fluviatile_contig66.13197.1 ID=mRNA_P-fluviatile_contig66.13197.1|Name=mRNA_P-fluviatile_contig66.13197.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3222bp|location=Sequence derived from alignment at P-fluviatile_contig66:269914..277255+ (Porterinema fluviatile SAG_2381)back to top |