mRNA_P-fluviatile_contig65.13167.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig65.13167.1 vs. uniprot
Match: A0A6H5JNT7_9PHAE (CCHC-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNT7_9PHAE) HSP 1 Score: 444 bits (1142), Expect = 7.900e-142 Identity = 278/378 (73.54%), Postives = 294/378 (77.78%), Query Frame = 1
Query: 2314 VDASSRSPPECGKTLSAAASRRFLLRYAEYERVVARGNEGRVVQRKPTLISELLLVHIRKCLSSLYFEGKKILTEAELREGRSLNAEISGEALVEPAEAKAGVTRAATMKPGASVPDRVYAVQSALEYYLAENPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFKANVESSLELQGNWKTEPGRVLAVMVKEATDRKKIEKVDAERQTR-------GGTRAAGDTSDKAARGGAADKAXXXXXXXXXXXXXGSSVNCWVCDKPGHIARYGKQVSSEKSGGKPAPAAAGSGKSPA-------------------RPRQQQQGGQQRSGQQPGSTV*SR----------AIFSEEQ--------KQVGGDGVPAAL 3315
V S++ PPE GKTLSAAASRRFLLRYAEYER+V RGNEGRVVQRKPT ISELLLVHIRKCLSSLYFEGKKILTEA+LREG SLNAEISGEALVEPAEAKAGVTRAATMKPGASV +R+YA+ SALEY+L NPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFKANVESSLELQGNWKTEPG VLAVMVKEATD KK+EKVDAERQTR GG RAAGD SDKAARGGAA K XXXXXXXXXXXXX S NCWVCDKPGHIAR KQ SSEKSGGKPAPAAAGS RP ++ GGQQR+GQQPGSTV R ++ E+ K VG D +PA L
Sbjct: 29 VLGSTQKPPEYGKTLSAAASRRFLLRYAEYERLVGRGNEGRVVQRKPTSISELLLVHIRKCLSSLYFEGKKILTEAKLREGLSLNAEISGEALVEPAEAKAGVTRAATMKPGASVLERIYAIHSALEYFLVVNPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFKANVESSLELQGNWKTEPGGVLAVMVKEATDWKKLEKVDAERQTRDAERKTRGGARAAGDKSDKAARGGAAGKXXXXXXXXXXXXXXXXSGNCWVCDKPGHIARGCKQASSEKSGGKPAPAAAGSXXXXXXXXXXXXXXXXXXXXAGFNRP-EEAHGGQQRAGQQPGSTVQRRPTCVPLDDIPSLLEVEEAVREMANRKAVGPDDLPAEL 405
BLAST of mRNA_P-fluviatile_contig65.13167.1 vs. uniprot
Match: A0A6H5L1I2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1I2_9PHAE) HSP 1 Score: 392 bits (1008), Expect = 1.060e-118 Identity = 248/402 (61.69%), Postives = 260/402 (64.68%), Query Frame = 1
Query: 2314 VDASSRSPPECGKTLSAAASRRFLLRYAEYERVVARGNEGRVVQRKPTLISELLLVHIRKCLSSLYFEGKKILTEAELREGRSLNAEISGEALVEPAEAKAGVTRAATMKPGASVPDRVYAVQSALEYYLAENPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFKANVESSLELQGNWKTEPGRVLAVMVKEATDRKKIEKVDAERQTRGGTRAAGDTSDKAARGGAADKAXXXXXXXXXXXXXGSSVNCWVCDKPGHIARYGKQVSSEKSGGKPAPAAAGSGKSPARPRQQQQGGQQRSGQQPGSTV*SRAIFSEEQKQVGGDGVPAALPPPPVPVQWTTASPDATTVPAWRPRSMDGVASLHAEGVDVDRTGTWCLADLSVPGAAESTVCPVRAVL 3519
V S + PPE GKTLSAAASRRFLLRYAEYERV A GNEGRVVQRKPT ISELLLVHIRKCLSSLYFEGKKILTEAELREG SLNAE SGEALVEPAEAKAGVTRAA+MKP ASV +RVYAV SALE YLAENPNVA L+RNADDEWLEES HVVSKALVKGISPPEFKANVESSL LQGN KTEP RV+AVMVKEATD KK EK A V C G + + SS +GG A +GS RP FSEEQKQ GD V ALPPPPVPVQ T ASPDATT PAWR +SMDGVASLHAEGVDVDRT VP + CP+R L
Sbjct: 29 VLGSIQKPPEYGKTLSAAASRRFLLRYAEYERVAACGNEGRVVQRKPTSISELLLVHIRKCLSSLYFEGKKILTEAELREGLSLNAETSGEALVEPAEAKAGVTRAASMKPSASVLERVYAVHSALECYLAENPNVAWLHRNADDEWLEESEHVVSKALVKGISPPEFKANVESSLGLQGNCKTEPERVIAVMVKEATDWKKTEKW----------------------------ARWPVRLFWELLGIVWEVRGKTCTGGGRVWKIAGATSSAAAGGS---ATSGSAAGFNRP--------------------EYGRFSEEQKQGRGDAVAEALPPPPVPVQGTKASPDATTAPAWRSQSMDGVASLHAEGVDVDRT---------VP--TTNKACPLRLAL 368
BLAST of mRNA_P-fluviatile_contig65.13167.1 vs. uniprot
Match: A0A6H5K9E0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K9E0_9PHAE) HSP 1 Score: 365 bits (937), Expect = 4.150e-106 Identity = 201/232 (86.64%), Postives = 208/232 (89.66%), Query Frame = 1
Query: 2314 VDASSRSPPECGKTLSAAASRRFLLRYAEYERVVARGNEGRVVQRKPTLISELLLVHIRKCLSSLYFEGKKILTEAELREGRSLNAEISGEALVEPAEAKAGVTRAATMKPGASVPDRVYAVQSALEYYLAENPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFKANVESSLELQGNWKTEPGRVLAVMVKEATDRKKIEKVDAERQ-------TRGGTRAAGDTSDK 2988
V S++ PPE GKTLSAAASRRFLLRYAEYERVV RGNEGRVVQRKPT I ELLLVHIRKCLSSL+FEGKKILTEAELREG SLNAEISGEALVEPAEAKAGVTRAAT+KPGASV +RVYAV SALEYYLAENPNVARLY NADDEWLEESAHVVSKALVK ISPPEFKANVESSLELQGNWKTEPGRVLAVMVKEA D KKIE VDAERQ TRGG RAAGD S++
Sbjct: 37 VLGSTQEPPEYGKTLSAAASRRFLLRYAEYERVVTRGNEGRVVQRKPTSIPELLLVHIRKCLSSLHFEGKKILTEAELREGLSLNAEISGEALVEPAEAKAGVTRAATVKPGASVLERVYAVHSALEYYLAENPNVARLYCNADDEWLEESAHVVSKALVKEISPPEFKANVESSLELQGNWKTEPGRVLAVMVKEAIDWKKIENVDAERQPRDAERKTRGGARAAGDKSER 268
BLAST of mRNA_P-fluviatile_contig65.13167.1 vs. uniprot
Match: A0A6H5L028_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L028_9PHAE) HSP 1 Score: 313 bits (803), Expect = 7.060e-85 Identity = 197/326 (60.43%), Postives = 219/326 (67.18%), Query Frame = 1
Query: 2314 VDASSRSPPECGKTLSAAASRRFLLRYAEYERVVARGNEGRVVQRKPTLISELLLVHIRKCLSSLYFEGKKILTEAELREGRSLNAEISGEALVEPAEAKAGVTRAATMKPGASVPDRVYAVQSALEYYLAENPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFKANVESSLELQGNWKTEPGRVLAVMVKEATDRKKIEKVDAERQTRGGTRAAGDTSDKAARGGAADKAXXXXXXXXXXXXXGSSVNCWVCDKPGHIARYGKQVSSEKSGGKPAPAAAGSGKSPARPRQQQQGGQQRSGQQPGSTV*SRAIFSEEQKQVG 3291
V +++ PPE GKTLSAAASRRFLLRYAEY+RVV +YF+ KK L EAEL EG S+NAEIS EALV+P EAKAGVTRAATMKPG SV +RVYAV SALEYYLAE PNVARLY +ADDEWLEE A+VVSKAL+K +PG VLAVMVKEAT KKIEKVDAER+ RGG RAAG+ +KAARGGA+ K XXX GSS NCW+CDKPGH+AR+ K+ SSEKSGGKPAPAAAGS KSPARP QQQQ QR GQQPGS V RA F +VG
Sbjct: 30 VLGATQKPPEYGKTLSAAASRRFLLRYAEYKRVV------------------------------VYFDRKKNLAEAELLEGLSINAEISREALVKPVEAKAGVTRAATMKPGVSVLERVYAVHSALEYYLAEKPNVARLYHHADDEWLEELANVVSKALMK-----------------------DPGCVLAVMVKEATGWKKIEKVDAERKARGGGRAAGEKFNKAARGGASGKPRGQRSGGGQXXXSGSSGNCWICDKPGHVARHCKKASSEKSGGKPAPAAAGSEKSPARPHQQQQASPQREGQQPGSIVQGRAAFRRSSSKVG 302
BLAST of mRNA_P-fluviatile_contig65.13167.1 vs. uniprot
Match: D8LH23_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH23_ECTSI) HSP 1 Score: 125 bits (315), Expect = 2.120e-30 Identity = 69/78 (88.46%), Postives = 71/78 (91.03%), Query Frame = 1
Query: 2518 GKKILTEAELREGRSLNAEISGEALVEPAEAKAGVTRAATMKPGASVPDRVYAVQSALEYYLAENPNVARLYRNADDE 2751
GKK LTEAEL EG SLNAEISGEALVEPAEAKAGV RAATMKPGASV +RVYAV SALEYYLAEN NVARLYR+ADDE
Sbjct: 23 GKKNLTEAELLEGLSLNAEISGEALVEPAEAKAGVIRAATMKPGASVLERVYAVHSALEYYLAENTNVARLYRDADDE 100
BLAST of mRNA_P-fluviatile_contig65.13167.1 vs. uniprot
Match: A0A6H5L7F6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7F6_9PHAE) HSP 1 Score: 120 bits (302), Expect = 8.680e-24 Identity = 124/438 (28.31%), Postives = 181/438 (41.32%), Query Frame = 1
Query: 2308 VCVDASSRSPPECGKTLSAAASRRFLLRYAEYERVVARGNEGRVVQRKPTLISELLLVHIRKCLSSLYFEGK--KILTEAELREGRSLNAEISGEALVEPAEAKAGVTRAATMKPGASVPDRVYAVQSALEYYLAENPNVARLYRNADDEWLEESAHVVSKALVKGISPPEFKANVESSLELQGNWKTEPGRVLAVMVKEATDRKKIEKVDAERQTRGGTRAAGDTSDKAARGGAADKAXXXXXXXXXXXXXGSSVNCWVCDKPGH---------IARYGKQVSSEKSGGK-PAPAAAGSGKSPARPRQQQQGGQQRS----------------GQQPGSTV*SRAIFSEE--QKQVGGDGVPAALPPPPVPVQWTTASPDAT-TVPAWRPRSMDGVASLHAEGVDVDRTGTWCLADLSVPGAAESTVCPVRAVLDSG 3528
+ + + +PPE + S S RF Y EYER + N G+ VQR+ ++LL +R LS +YF + L E +L E + +AE EA +P A V+R TM + DR+ AV L Y ENP L+ + + A V++K LV G++PPEF+ V+ L ++G WK +P V ++ + ATD + +E+ + D+ ++ GAA+KA + CW C + GH + G S S A +A GS Q + G + + V R + E K+ G D +P P+P ASP A AWR S G L E D + C DLSVPG + VCP +LDSG
Sbjct: 16 LVLGGNGPTPPEYQRPFSQKNSLRFHQEYLEYERKITLSNLGQSVQRQVLKRTQLLPNSVRATLSRIYFRNAHGRELEEDDLLEALTKHAECWAEAQTDPHVAFTEVSRIVTMGKQPTAVDRIDAVYDKLSVYF-ENPRSKALFCEVNGAFKPGPAQVITKHLVAGLTPPEFRKKVDGILAMRGRWKEDPELVFDLIREAATDWRTVEQFER---------------DRGSQRGAAEKAAPSSAARRKQKSTPGPLTCWTCGEAGHRSGDCPKGGASALGADADSRASRSHGSAGSAKGSXXXXXXXXQTHRKGTPAAXXXXXXXXXXXXXXXXASTQNTPVAGRVASTSEGDAKESGDDH--GVVPSSPLPEDGEAASPGAAPAATAWRGVSAGGEHRLLQEEFDANAHDRSCQVDLSVPGMSCPDVCPAVGILDSG 435 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig65.13167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig65.13167.1 >prot_P-fluviatile_contig65.13167.1 ID=prot_P-fluviatile_contig65.13167.1|Name=mRNA_P-fluviatile_contig65.13167.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=324bp MRRDFDDEHVCVDASSRSPPECGKTLSAAASRRFLLRYAEYERVVARGNEback to top mRNA from alignment at P-fluviatile_contig65:770020..774026+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig65.13167.1 ID=mRNA_P-fluviatile_contig65.13167.1|Name=mRNA_P-fluviatile_contig65.13167.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4007bp|location=Sequence derived from alignment at P-fluviatile_contig65:770020..774026+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig65:770020..774026+ >mRNA_P-fluviatile_contig65.13167.1 ID=mRNA_P-fluviatile_contig65.13167.1|Name=mRNA_P-fluviatile_contig65.13167.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1944bp|location=Sequence derived from alignment at P-fluviatile_contig65:770020..774026+ (Porterinema fluviatile SAG_2381)back to top |