mRNA_P-fluviatile_contig64.13067.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig64.13067.1
Unique NamemRNA_P-fluviatile_contig64.13067.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig64.13067.1 vs. uniprot
Match: A0A6H5K6L9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6L9_9PHAE)

HSP 1 Score: 167 bits (424), Expect = 5.910e-41
Identity = 94/172 (54.65%), Postives = 124/172 (72.09%), Query Frame = 2
Query:  458 GGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVILERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGKEKLRYTVVLAVRGDGQKVRPRIIYKGNPF 973
            GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G EG AWA + KLR +L + A E  I  R    A D   ++ E D+  T+E+L +V+ ++F  L NMDQTP+Q E+P +TT+EKTGAK A I+TGGKEK R+T+VLAV  DG+KV PRII+KG PF
Sbjct:   13 GGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGDEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEIPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPF 179          
BLAST of mRNA_P-fluviatile_contig64.13067.1 vs. uniprot
Match: A0A6H5JUK2_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUK2_9PHAE)

HSP 1 Score: 163 bits (413), Expect = 6.410e-40
Identity = 92/173 (53.18%), Postives = 121/173 (69.94%), Query Frame = 2
Query:  458 GGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVILERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV 976
            GGM +  +P +   F+ + N+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L   A E  I  R    A D   ++ E D+  T E+L +V+ ++F  L NMDQTP+Q EMP +TT+EKTGAK A I+TGGKEK R+T+VLAV  DG+KV PRII+KG PF+
Sbjct:   13 GGMSANAKPTEALAFKVKINSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVRRAGE--IYARRHPPAPDESPIKGE-DL--TFEQLASVEAEVFKELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFI 180          
BLAST of mRNA_P-fluviatile_contig64.13067.1 vs. uniprot
Match: A0A6H5KRZ8_9PHAE (DDE-1 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRZ8_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 7.790e-40
Identity = 93/173 (53.76%), Postives = 125/173 (72.25%), Query Frame = 2
Query:  458 GGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVILERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV 976
            GGM +  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KLR +L + A E  I  R    A D   ++ E D+  T+E+L +V+ ++F  L NMDQTP+Q EMP +TT+EKTGAK A I+TGG+EK R+T+VLAV  DG+KV PRII+KG PF+
Sbjct:  195 GGMSTNAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGEEKERFTLVLAVMADGKKVSPRIIFKGTPFI 362          
BLAST of mRNA_P-fluviatile_contig64.13067.1 vs. uniprot
Match: A0A6H5JFD9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFD9_9PHAE)

HSP 1 Score: 161 bits (407), Expect = 1.190e-39
Identity = 92/173 (53.18%), Postives = 123/173 (71.10%), Query Frame = 2
Query:  458 GGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVILERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV 976
            GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+TSV QK  +G+EG A A + KLR +L + A E  I  R    A D   ++ E D+  T+E+L +V+ ++F  L NMDQTP+Q EMP +TT+EKTGAK A I+TGGKEK R+T+VLAV  DG+KV PRII+KG PF+
Sbjct:  180 GGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRTSVRQKLQKGYEGMASATVMKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQLASVEAEVFEELGNMDQTPVQHEMPVETTLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRIIFKGTPFI 347          
BLAST of mRNA_P-fluviatile_contig64.13067.1 vs. uniprot
Match: A0A6H5JTG5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTG5_9PHAE)

HSP 1 Score: 158 bits (400), Expect = 6.930e-37
Identity = 89/173 (51.45%), Postives = 120/173 (69.36%), Query Frame = 2
Query:  458 GGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVILERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV 976
            GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+ SVGQK P+G+EG AWA + KLR +L + A E  I  R    A D   ++ E D+  T+E+  +V+ ++F  L NMDQTP+Q EMP +TT+E TG K A I+TGGKEK R+T+VLAV  DG+ V P II+KG PF+
Sbjct:  167 GGMPANAKPEEALAFKVKFNSWYQRFRKRNGFSIRRRASVGQKLPKGYEGMAWATVTKLREALVKRAGE--IYARRHPPAPDESPIKGE-DL--TSEQPASVEAEVFEELGNMDQTPVQHEMPVETTLEDTGGKDARISTGGKEKERFTLVLAVMADGKMVSPCIIFKGTPFI 334          
BLAST of mRNA_P-fluviatile_contig64.13067.1 vs. uniprot
Match: A0A6H5L819_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L819_9PHAE)

HSP 1 Score: 152 bits (385), Expect = 1.660e-36
Identity = 87/172 (50.58%), Postives = 119/172 (69.19%), Query Frame = 2
Query:  458 GGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVILERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGKEKLRYTVVLAVRGDGQKVRPRIIYKGNPF 973
            GG+P+  +PE+   F+ +FN+WY RF KR+ F IRR+TSVGQK P+G+EG AWA + KLR +L + A E  I  R    A D   ++ E D+  T+E+L +V+ ++F  +  M QTP+Q E+P   T+EKTGAK A I+TGGKEK R+T+VLAV  DG+KV PR I+KG PF
Sbjct:  164 GGVPANAKPEEALAFKVKFNSWYQRFRKRNGFRIRRRTSVGQKLPKGYEGMAWATVMKLREALVKRAGE--IYARRHPPAHDESPIKGE-DL--TSEQLASVEAEVFEEVGIMGQTPVQHEVPVAITLEKTGAKDARISTGGKEKERFTLVLAVMADGKKVSPRNIFKGTPF 330          
BLAST of mRNA_P-fluviatile_contig64.13067.1 vs. uniprot
Match: A0A6H5JHT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHT8_9PHAE)

HSP 1 Score: 154 bits (390), Expect = 2.440e-35
Identity = 88/174 (50.57%), Postives = 122/174 (70.11%), Query Frame = 2
Query:  458 GGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVILERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGG-KEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV 976
            GGMP+  +PE+   F+ +FN+WY RF KR+ FSIRR+TSVGQK P+G+EG AWA + KL  +L + A E  I  R    A D   ++ E D+   +E+L +V+ ++F  + NMDQ P+Q EMP +TT++KTGAK A I+TGG  EK R+T+VLAV  DG+KV PRII++G PF+
Sbjct:  207 GGMPANAKPEEAIDFKFKFNSWYQRFRKRNGFSIRRRTSVGQKLPKGYEGMAWATVMKLCEALVKRAGE--IYARRHPPAPDESPIKGE-DL--NSEQLASVEAEVFEEVGNMDQMPVQHEMPVETTLDKTGAKDARISTGGGNEKERFTLVLAVTADGKKVSPRIIFEGTPFI 375          
BLAST of mRNA_P-fluviatile_contig64.13067.1 vs. uniprot
Match: A0A6H5K417_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K417_9PHAE)

HSP 1 Score: 146 bits (369), Expect = 1.220e-33
Identity = 79/165 (47.88%), Postives = 104/165 (63.03%), Query Frame = 2
Query:  482 PEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVILERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV 976
            PE+   F+ +FN+WY RF KR+RFS RR+TSV QK P+G+EG AWA + KLR +L                               T+E+L +V+ ++F  L NM QTP+Q EMP +TT+EKTGAK A I+TGGKE  R+T+V AV  DG+KV PRII+KG PF+
Sbjct:  307 PEEALAFKVKFNSWYQRFRKRNRFSTRRRTSVDQKLPKGYEGMAWATVMKLREAL------------------------------LTSEQLASVEAEVFEELGNMKQTPVQQEMPVETTLEKTGAKDARISTGGKENERFTLVPAVMADGKKVSPRIIFKGTPFI 441          
BLAST of mRNA_P-fluviatile_contig64.13067.1 vs. uniprot
Match: A0A6H5K8Y4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8Y4_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 7.370e-33
Identity = 86/173 (49.71%), Postives = 116/173 (67.05%), Query Frame = 2
Query:  458 GGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVILERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFV 976
            GG+ ++ +PE+      +F +WY RF KR++FSIRR+TSVGQK P+G EG AWA + KLR +L E A E +  +R   A    G   I  + +++++ L  V  ++F  L NMDQTP+Q EMP +TT+E TGAK A I TGGKEK R+T+ LAV  DG+KV  RII+KG PFV
Sbjct:  167 GGLAAKPKPEEALALNSKFKSWYQRFCKRNKFSIRRRTSVGQKLPKGHEGMAWATLMKLRKALLERAGE-IYAQRYPPAP---GESPIRGEDLSSSQ-LELVTDELFEELGNMDQTPVQHEMPVETTLENTGAKDARIATGGKEKERFTLCLAVSADGKKVPLRIIFKGTPFV 334          
BLAST of mRNA_P-fluviatile_contig64.13067.1 vs. uniprot
Match: A0A6H5JQM5_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQM5_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 6.930e-31
Identity = 88/187 (47.06%), Postives = 120/187 (64.17%), Query Frame = 2
Query:  458 GGMPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKAWAFIQKLRSSLREHAQEAVILERAAQAAKDGGTVEIEMDVIATAEELLAVQGKIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGKEKLRYTVVLAVRGDGQKVRPRIIYKGNPFVGVPTSQ----AQPR 1006
            GG+ +    E+   F+ +F  WY+RF +RH  SIRR+TSVGQK P G+EG A+A + KLR++L E A E +   R   A+   G   I+   ++ A+ L +V  ++F  L NMDQTP+Q EMP +TT+EK GAK A I+TGGKEK R+T+ LAV  DG KV  RII+KG PF+   T++     QPR
Sbjct:  186 GGLTAAASAEETLAFRTKFKNWYHRFRERHGLSIRRRTSVGQKLPTGYEGLAFATLMKLRTALLERAGE-IYARRNPPAS---GESPIKGKDLSPAQ-LESVATEVFEELGNMDQTPVQQEMPVETTLEKGGAKDARISTGGKEKERFTLCLAVMADGGKVPLRIIFKGKPFIPPSTARRGKNTQPR 367          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig64.13067.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5K6L9_9PHAE5.910e-4154.65DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JUK2_9PHAE6.410e-4053.18DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5KRZ8_9PHAE7.790e-4053.76DDE-1 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5JFD9_9PHAE1.190e-3953.18Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JTG5_9PHAE6.930e-3751.45DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L819_9PHAE1.660e-3650.58Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JHT8_9PHAE2.440e-3550.57Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K417_9PHAE1.220e-3347.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K8Y4_9PHAE7.370e-3349.71Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQM5_9PHAE6.930e-3147.06DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig64contigP-fluviatile_contig64:446197..449470 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score100.5
Seed ortholog evalue1e-18
Seed eggNOG ortholog2880.D7FXD3
Preferred namePOGK
KEGG koko:K09228
EggNOG free text desc.DNA binding
EggNOG OGsKOG3105@1,KOG3105@2759
COG Functional cat.CH
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Hectar predicted targeting categoryother localisation
Exons2
Model size2752
Cds size678
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig64.13067.1prot_P-fluviatile_contig64.13067.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig64 446660..447859 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817056.4326825-UTR-P-fluviatile_contig64:446196..4466591622817056.4326825-UTR-P-fluviatile_contig64:446196..446659Porterinema fluviatile SAG_2381UTRP-fluviatile_contig64 446197..446659 +
1693570973.5068464-UTR-P-fluviatile_contig64:446196..4466591693570973.5068464-UTR-P-fluviatile_contig64:446196..446659Porterinema fluviatile SAG_2381UTRP-fluviatile_contig64 446197..446659 +
1622817056.4687822-UTR-P-fluviatile_contig64:447859..4494701622817056.4687822-UTR-P-fluviatile_contig64:447859..449470Porterinema fluviatile SAG_2381UTRP-fluviatile_contig64 447860..449470 +
1693570973.540532-UTR-P-fluviatile_contig64:447859..4494701693570973.540532-UTR-P-fluviatile_contig64:447859..449470Porterinema fluviatile SAG_2381UTRP-fluviatile_contig64 447860..449470 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817056.4449232-CDS-P-fluviatile_contig64:446659..4470771622817056.4449232-CDS-P-fluviatile_contig64:446659..447077Porterinema fluviatile SAG_2381CDSP-fluviatile_contig64 446660..447077 +
1693570973.5203028-CDS-P-fluviatile_contig64:446659..4470771693570973.5203028-CDS-P-fluviatile_contig64:446659..447077Porterinema fluviatile SAG_2381CDSP-fluviatile_contig64 446660..447077 +
1622817056.4578505-CDS-P-fluviatile_contig64:447599..4478591622817056.4578505-CDS-P-fluviatile_contig64:447599..447859Porterinema fluviatile SAG_2381CDSP-fluviatile_contig64 447600..447859 +
1693570973.5300083-CDS-P-fluviatile_contig64:447599..4478591693570973.5300083-CDS-P-fluviatile_contig64:447599..447859Porterinema fluviatile SAG_2381CDSP-fluviatile_contig64 447600..447859 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig64.13067.1

>prot_P-fluviatile_contig64.13067.1 ID=prot_P-fluviatile_contig64.13067.1|Name=mRNA_P-fluviatile_contig64.13067.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=226bp
MPSQDEPEKMEKFQKRFNAWYYRFLKRHRFSIRRKTSVGQKKPEGWEGKA
WAFIQKLRSSLREHAQEAVILERAAQAAKDGGTVEIEMDVIATAEELLAV
QGKIFALLYNMDQTPIQAEMPPDTTVEKTGAKSACITTGGKEKLRYTVVL
AVRGDGQKVRPRIIYKGNPFVGVPTSQAQPRSLARTACRTSTSQTSGRAS
ATRLAASASGCRSRRGATAPSPTSG*
back to top

mRNA from alignment at P-fluviatile_contig64:446197..449470+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig64.13067.1 ID=mRNA_P-fluviatile_contig64.13067.1|Name=mRNA_P-fluviatile_contig64.13067.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3274bp|location=Sequence derived from alignment at P-fluviatile_contig64:446197..449470+ (Porterinema fluviatile SAG_2381)
GACAGCAGCTGGGGGAGTTTGCTTCGTCCCTCTGGTGATGCCAAGAAGAA GAAGGGCCCGCCTTCCAGAGAGTACCCGCCAGCTCCGTTCACACTGCGGC GAGTATCTGGAAAGAGCGGGCGGTGCGCATACGAGAACGCGCAGAAGCTC GAGGTGCTGAAGTTCAGCCGGCTAACGTGTGGTGATGGGCACCCAGTCGG AAGGTGGGTGGGGAAGGTGTTCGGCATCGACAAGAAGCTGATCCGGGACT GGGAGAGCCAGGAGGCAGAGCTTGTGGCGTTTTCGAAGAAGGAGAACGCA AGCAAGCAGCGGTCGTTGCACACTGGACGCGAGGCTGACACGAAGGAGGT GGAGGTGGCCATAGTGGACGAGATCAACACGCTCAGGAAAAACGGTGCTG CTGTGACCCGGGACCTCGTCATGGCCAAGCTTCTCTCCGAGATGCCAACC TTTTCAGGGGGGCATGCCGTCCCAAGACGAGCCGGAGAAGATGGAAAAAT TTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAAGAGGCACCGG TTCTCGATCCGACGCAAGACGAGCGTGGGGCAGAAGAAGCCGGAAGGATG GGAGGGCAAGGCGTGGGCATTCATCCAGAAGCTTCGCTCAAGCCTGCGTG AGCACGCGCAGGAAGCCGTTATCTTGGAGAGGGCAGCCCAGGCAGCGAAG GACGGAGGGACCGTTGAGATCGAGATGGACGTCATCGCAACTGCGGAGGA ACTTCTGGCTGTTCAGGGCAAGATCTTCGCCCTTCTGTACAACATGGACC AGACCCCGATCCAGGCTGAGATGCCGCCGGACACCACGGTGGAGAAGACT GGTGCGAAGAGCGCTTGCATCACGACAGGAGGTGAGACGGTGTACTAAAG GTATTTCGATTGTTGAAATTCAGTTCAAACCAACATGGTGGAGATTTTCT GACGATGGAACAAGCGGGGAATTACAAATCTGCCGACGGCGGAAAAACGG GGAATTATAATATTTTGCATTGCTTCTGCCGTCACGTGCACGCTTTCGTT CTTCTATTGCCTGCAAGTACGGTACGTACTGCTGTATCGCCTGTCCCTTC GAACTACCGGTACACAGCGATGAAATTATTCATATGGTATTCCGCTGAAG TATTTTTTTTAATATACATATGTTTTGGGGGGCAATATATATTTTACCGT ATACACCGGAGTTTGTTTTATTTTACTTTTTATGTTGTAGTAGGCTTTAC ACCCCAGGAGTTAAAGGTGTGTGTTTGTTTTTTATTATTATTTATTTTTT GTTTGTTGTGGCAGGCAATACGATTAATAATTGTACTGCTTTGCGGAGTA TTTTCTTTTAACACAATTTCCTTTGTTTGCATACGCCCCAATTTTCGCAC CAGGCAAGGAGAAGCTGCGGTACACCGTGGTGCTAGCTGTCCGGGGTGAT GGACAGAAGGTGCGGCCGCGCATCATCTACAAGGGGAACCCTTTTGTCGG GGTACCAACAAGTCAGGCTCAGCCAAGAAGCCTGGCAAGAACAGCCTGTC GTACGAGCACCTCCCAGACAAGCGGACGAGCTTCGGCTACCCGGCTGGCG GCATCAGCCTCGGGGTGCAGAAGTCGTCGTGGTGCGACGGCACCCAGTCC GACGAGTGGGTAACCCAGGACTTCATGCGCCGCCCAGGGTCTACCTCCAG AGATCAGCGTCCCAGCGTTCTCGTGCTCGACGACTTCAGGTGCCACCGGG AAGAGAGGTTCCAAAAGAAGCTAATGGACCTCGTAGATAAATCATTTTGT AAATTTTCAACCATACACCAATCATCCAAAACACTTGGAAATACAATAGC CTATTCTACGGAAATCTTGAATCGTGCTCGACACTTGCTAATAGCATGGC ACGAATCAAATACGGCTTTTTCAATCGGGCAAGAAAACCGGACGATTCGA AGCACGATTCAAGTTTTAGACTCCAAGTCCAAATCTGACGCACACACAAA TCAATGCTTTCAATCAGGTCAGAAAAGTGGACGAGTGAAGCACGATTGAA TTGGAAAAACAATACTTTCAATCAGGTCATAAAAAGTGGACGATTGAAGC ACGACTGAATTAGAAATACAATACTTTCAATCAGGTAAGAAAAATTAACG ATTGAAGCATAATTGAAAGCATGATTGAAAGCATGATTGAAAGCACGATT GCACGATTGAAAGCTTGATACGAAAAACACAATTCGCGTCTTGAACAGAT GGATGTTCTTCTCAGTACAAGACCTGGTTCGCTGGGGCTGTGAAGTCAGA TGCAATGAAGACAGAGGAAGAGGGCGGGGGCGTCAAAAGGTTGTGACAAC GTTTTCACAAGCATCCGACGGGGGAATATGGGGGCTTCGTGCCTCCCATA ACACCAACACGTGGCACCCAAACAGGAAATTGCGCGTAGAGAATTCGAAT CCTCGCAGATGAATTGCATACTCGGTGTTTCTTACGGGGTGACCAGTGGG CATCTTTCCAGAAAAAATTGAGACTCATCCGACAATTTGGCGGCGAGATA CTACAGACAAGGAGGTTGCGCCGCACCACAGCATCAAAATTCAACCTACA AAATCAGGATCTTCATTTCAGGTCTTCATGCTCGATGATATTGACGGTGA CCAGTCTGCATCTTTCAAGAAAAAATGAGACTCATCCGACAATTCGGCGG CGCGATACTTCAGACAACGAGGTTGCGCCGCATCGCGACATCAACATTCA ACCCAAAAAATCAGAATCTTCATTTCAGGTCTTCATGCTCGGTGATATTG ACGGGATGTACAGTCCGCATCATTCAAGAAAAAATGAGCCTCGCCCGACA ACTTGGCGGCGAGATACGACGGGACAGGAGGTTGCGCCGCAAGTGCAATA TTGAAAACAACTGGTTTTTCGACAAGTGTGTGTCGGCGTTTGGTGCATCC ATGAAAGCTTCATTTTTTTACAAGTGGGGGTGGCGGTGAGCAATTAATAC CAAACTGTGCGTTCACGTCACCCCCAGGCGGCGAGAAGCGAGCACGAGCG GGGAGGGGGTGTAATGCTCCGTACGCTACAAGTTTTACCCTCCAACGTGT TTGGACTCCGTACTTTCTGATTGTGTCGCCAGATGTATGATTCACGTACA TGCAAAGCCGAGCAGGCTCAAGCGATGCTCTGACTTACGCCCAACGGGAA AACCCAACTCAAAATCCTTGTTTCATGAGGTCGAGGCGTGTTTAAGCTAC CCTTCACTACCATATATTTTGCCC
back to top

Coding sequence (CDS) from alignment at P-fluviatile_contig64:446197..449470+

>mRNA_P-fluviatile_contig64.13067.1 ID=mRNA_P-fluviatile_contig64.13067.1|Name=mRNA_P-fluviatile_contig64.13067.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1356bp|location=Sequence derived from alignment at P-fluviatile_contig64:446197..449470+ (Porterinema fluviatile SAG_2381)
ATGCCGTCCCAAGACGAGCCGGAGAAGATGGAAAAATTTCAGAAGCGTTT
CAACGCCTGGTACTACAGGTTCCTCAAGAGGCACCGGTTCTCGATCCGAC
GCAAGACGAGCGTGGGGCAGAAGAAGCCGGAAGGATGGGAGGGCAAGGCG
TGGGCATTCATCCAGAAGCTTCGCTCAAGCCTGCGTGAGCACGCGCAGGA
AGCCGTTATCTTGGAGAGGGCAGCCCAGGCAGCGAAGGACGGAGGGACCG
TTGAGATCGAGATGGACGTCATCGCAACTGCGGAGGAACTTCTGGCTGTT
CAGGGCAAGATCTTCGCCCTTCTGTACAACATGGACCAGACCCCGATCCA
GGCTGAGATGCCGCCGGACACCACGGTGGAGAAGACTGGTGCGAAGAGCG
CTTGCATCACGACAGGAGATGCCGTCCCAAGACGAGCCGGAGAAGATGGA
AAAATTTCAGAAGCGTTTCAACGCCTGGTACTACAGGTTCCTCAAGAGGC
ACCGGTTCTCGATCCGACGCAAGACGAGCGTGGGGCAGAAGAAGCCGGAA
GGATGGGAGGGCAAGGCGTGGGCATTCATCCAGAAGCTTCGCTCAAGCCT
GCGTGAGCACGCGCAGGAAGCCGTTATCTTGGAGAGGGCAGCCCAGGCAG
CGAAGGACGGAGGGACCGTTGAGATCGAGATGGACGTCATCGCAACTGCG
GAGGAACTTCTGGCTGTTCAGGGCAAGATCTTCGCCCTTCTGTACAACAT
GGACCAGACCCCGATCCAGGCTGAGATGCCGCCGGACACCACGGTGGAGA
AGACTGGTGCGAAGAGCGCTTGCATCACGACAGGAGGCAAGGAGAAGCTG
CGGTACACCGTGGTGCTAGCTGTCCGGGGTGATGGACAGAAGGTGCGGCC
GCGCATCATCTACAAGGGGAACCCTTTTGTCGGGGTACCAACAAGTCAGG
CTCAGCCAAGAAGCCTGGCAAGAACAGCCTGTCGTACGAGCACCTCCCAG
ACAAGCGGACGAGCTTCGGCTACCCGGCTGGCGGCATCAGCCTCGGGGTG
CAGAAGTCGTCGTGGTGCGACGGCACCCAGTCCGACGAGTGGGTAAGCAA
GGAGAAGCTGCGGTACACCGTGGTGCTAGCTGTCCGGGGTGATGGACAGA
AGGTGCGGCCGCGCATCATCTACAAGGGGAACCCTTTTGTCGGGGTACCA
ACAAGTCAGGCTCAGCCAAGAAGCCTGGCAAGAACAGCCTGTCGTACGAG
CACCTCCCAGACAAGCGGACGAGCTTCGGCTACCCGGCTGGCGGCATCAG
CCTCGGGGTGCAGAAGTCGTCGTGGTGCGACGGCACCCAGTCCGACGAGT
GGGTAA
back to top