mRNA_P-fluviatile_contig61.12896.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig61.12896.1
Unique NamemRNA_P-fluviatile_contig61.12896.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
BLAST of mRNA_P-fluviatile_contig61.12896.1 vs. uniprot
Match: A0A6H5L6B6_9PHAE (DDE Tnp4 domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6B6_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 3.930e-138
Identity = 190/270 (70.37%), Postives = 226/270 (83.70%), Query Frame = 1
Query:  109 LVLVGLL*PALTKDDKMGRLRNGAIPVEYQVAMTLRWLAGASIFECMDGHVIARSTAYSITSRVLEAIIACPELDCKWPDGEAARANADLFRSCSTFGIIRNCIGAMDGLFIRVVKPTAAEAEEPNMFYSGHKKGFGMNFQQAICDAEYRIIAWTMNCPGSQNDRTAFKVAGFGKLLEELPEGFFIVGDAAYPASDRVLVPFPGTRLSISQDAYNFYQSQCRMAIEQTFGILVRRWGILWRPIEVSLGKLANVVKAVVRLHNFCMNNKIE 918
            LVLV  L PAL K+ +MG LRNGAIPVE QVAMTLRWLAG SI+ECMDGHVIARSTAY +TS V+ A+ ACPEL+CKWP+GE A   A+LFR+ S+  ++R C+GA DGLF+R++KP+A E  EPN++Y+GHKKGFGMNFQ A+CDA+YRI+AW MNCPGSQNDRTAF  +GF KLL  LPEG F+VGDAAY AS+RV+VPFPGT LS SQDA N+Y SQCRMAIEQT+GILVRRWGILWRP+EV + K  +VV AVVRLHNFC + K++
Sbjct:   71 LVLVDHLRPALQKNQQMGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAARAAELFRNRSSMDVVRKCVGATDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ-AVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVD 339          
BLAST of mRNA_P-fluviatile_contig61.12896.1 vs. uniprot
Match: A0A6H5K6M2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6M2_9PHAE)

HSP 1 Score: 390 bits (1003), Expect = 4.220e-132
Identity = 185/299 (61.87%), Postives = 230/299 (76.92%), Query Frame = 1
Query:    1 RSVLVLRERRPFADYIRPMLQDKTFAMRFRMDYPEFLVLVGLL*PALTKDDKMGRLRNGAIPVEYQVAMTLRWLAGASIFECMDGHVIARSTAYSITSRVLEAIIACPELDCKWPDGEAARANADLFRSCSTFGIIRNCIGAMDGLFIRVVKPTAAEAEEPNMFYSGHKKGFGMNFQQAICDAEYRIIAWTMNCPGSQNDRTAFKVAGFGKLLEELPEGFFIVGDAAYPASDRVLVPFPGTRLSISQDAYNFYQSQCRMAIEQTFGILVRRWGILWRPIEVSLGKLANVVKAVVRLHNF 897
            R   V RERR F  Y+RPM++D TF  RFRMDY +F+ L  +L P L +D+KMG LRNGAIPVE+Q+AMTLR+LAG S+FE MD +VIA+STAY+I  RV++AI    +L+CKWP G+ A A A+L+R  ST G+IR C+GAMDGLF+R++ P       P  FYSGHKK FGMNFQ  IC+A Y II WTMNCPGSQNDRTAFK +GF  LL ++P   FIVGDAAYPAS+RVLVP PGT L++SQDAYNFYQSQ R++IEQ FGILV+ W ILW+P+ + L ++ +V+ A+VRLHNF
Sbjct:   46 RGNFVYRERRSFYTYVRPMVEDNTFRKRFRMDYTDFMTLADILRPKLQRDEKMGALRNGAIPVEFQLAMTLRFLAGGSVFEVMDSNVIAKSTAYAIVHRVIDAINQTRQLNCKWPYGDDAEAQAELYRRRSTNGVIRRCVGAMDGLFVRLIPPCLKRHAVPGSFYSGHKKAFGMNFQ-GICNASYEIITWTMNCPGSQNDRTAFKHSGFDALLSKMPPDCFIVGDAAYPASNRVLVPDPGTALTLSQDAYNFYQSQARISIEQAFGILVKTWEILWKPLAIRLDRVGHVMNAIVRLHNF 343          
BLAST of mRNA_P-fluviatile_contig61.12896.1 vs. uniprot
Match: A0A6H5K3F2_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3F2_9PHAE)

HSP 1 Score: 387 bits (993), Expect = 1.100e-130
Identity = 183/299 (61.20%), Postives = 232/299 (77.59%), Query Frame = 1
Query:    1 RSVLVLRERRPFADYIRPMLQDKTFAMRFRMDYPEFLVLVGLL*PALTKDDKMGRLRNGAIPVEYQVAMTLRWLAGASIFECMDGHVIARSTAYSITSRVLEAIIACPELDCKWPDGEAARANADLFRSCSTFGIIRNCIGAMDGLFIRVVKPTAAEAEEPNMFYSGHKKGFGMNFQQAICDAEYRIIAWTMNCPGSQNDRTAFKVAGFGKLLEELPEGFFIVGDAAYPASDRVLVPFPGTRLSISQDAYNFYQSQCRMAIEQTFGILVRRWGILWRPIEVSLGKLANVVKAVVRLHNF 897
            R   V RERR +  Y +PM+QD TF +RFRMDY EF +L  +L P L ++++MG LRNG IPVE+Q+AM LR+LAG S+FE MDG+VIARSTAY+I  RV++AI    ELDC WP+GE A     ++R  ST G+IR C+GAMDGLF+R+ +P+      P  FYSGHKKGFGMNFQ  +C+A Y IIAWTMNCPGS NDRTAFK + FG +L+ LP G +IVGDAAYPASD+VLVP+PGT L+ SQDAYNFYQSQ R++IEQ FGI+V+ WGILWRP+++ L ++++V+ +VVRLHNF
Sbjct:   42 RDKFVRRERRSWYTYAKPMVQDGTFRLRFRMDYTEFALLADMLRPKLERNERMGALRNGVIPVEFQLAMALRFLAGGSVFEVMDGNVIARSTAYAIVHRVIDAINQTRELDCVWPEGEDALDQCGMYRRRSTNGVIRMCVGAMDGLFVRMTQPSLRRHVNPRSFYSGHKKGFGMNFQ-GVCNARYEIIAWTMNCPGSCNDRTAFKHSVFGTVLKTLPPGAYIVGDAAYPASDQVLVPYPGTSLTRSQDAYNFYQSQARISIEQAFGIMVKTWGILWRPLDMRLERVSSVINSVVRLHNF 339          
BLAST of mRNA_P-fluviatile_contig61.12896.1 vs. uniprot
Match: A0A6H5JJA1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJA1_9PHAE)

HSP 1 Score: 360 bits (923), Expect = 2.160e-120
Identity = 180/306 (58.82%), Postives = 218/306 (71.24%), Query Frame = 1
Query:    1 RSVLVLRERRPFADYIRPMLQDKTFAMRFRMDYPEFLVLVGLL*PALTKDDKMGRLRNGAIPVEYQVAMTLRWLAGASIFECMDGHVIARSTAYSITSRVLEAIIACPELDCKWPDGEAARANADLFRSCSTFGIIRNCIGAMDGLFIRVVKPTAAEAEEPNMFYSGHKKGFGMNFQQAICDAEYRIIAWTMNCPGSQNDRTAFKVAGFGKLLEELPEGFFIVGDAAYPASDRVLVPFPGTRLSISQDAYNFYQSQCRMAIEQTFGILVRRWGILWRPIEVSLGKLANVVKAVVRLHNFCMNNKIE 918
            RS LV RERRPF  YI+PMLQD TF+MRFRM+Y +F VLV  L PAL +++K G LRNGAIPVEYQVAMTLRWLAG SI+E MDGHVIARSTAY +TS V+ A+ ACPEL+CKWP+GE          + +   ++R C+GAMDGLF+R++KP+A E  EPN++Y+GHKKGFGMNFQ  +C               SQNDRTAF  +GF KLL  LPEG F+VG+AAY AS+RV+VPFPGT                    EQT+GILVRRWGILWRP+EV + K  +VV AVVRLHNFC + K++
Sbjct:   46 RSTLVARERRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQQNEKTGLLRNGAIPVEYQVAMTLRWLAGGSIYEYMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDLPEPPSFSATAALMDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQ--VC---------------SQNDRTAFNFSGFDKLLAGLPEGHFVVGNAAYGASERVVVPFPGTS----------------PPXEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCWDRKVD 318          
BLAST of mRNA_P-fluviatile_contig61.12896.1 vs. uniprot
Match: A0A6H5JVS8_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVS8_9PHAE)

HSP 1 Score: 298 bits (764), Expect = 3.540e-97
Identity = 154/290 (53.10%), Postives = 189/290 (65.17%), Query Frame = 1
Query:    1 RSVLVLRERRPFADYIRPMLQDKTFAMRFRMDYPEFLVLVGLL*PALTKDDKMGRLRNGAIPVEYQVAMTLRWLAGASIFECMDGHVIARSTAYSITSRVLEAIIACPELDCKWPDGEAARANADLFRSCSTFGIIRNCIGAMDGLFIRVVKPTAAEAEEPNMFYSGHKKGFGMNFQQAICDAEYRIIAWTMNCPGSQNDRTAFKVAGFGKLLEELPEGFFIVGDAAYPASDRVLVPFPGTRLSISQDAYNFYQSQCRMAIEQTFGILVRRWGILWRPIEVSLGKLANVV 870
            RS LV RERRPF  +I+P+LQD TF++RFRM+Y +F VL+  L PAL K++KMG LR GAIPVEYQ+AMTLRWLAG SI+ECMDGHVIARSTAY +TS V+ A+ ACPEL+CKWP+                  ++R C+GAMDGLF+R++KP+A E  EPN++Y+GH+KG                                                  +VGDAAY AS+RV+VPFPGT LS SQDA N Y SQ RMAIEQT+GILVRRWGILWRP+EV + K  +VV
Sbjct:   46 RSTLVARERRPFETHIKPLLQDHTFSVRFRMEYDDFRVLIDHLRPALHKNEKMGLLRIGAIPVEYQIAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEAR--------------MDVVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHRKGV-------------------------------------------------VVGDAAYGASERVVVPFPGTSLSASQDACNNYVSQYRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVV 272          
BLAST of mRNA_P-fluviatile_contig61.12896.1 vs. uniprot
Match: A0A6H5KCG0_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCG0_9PHAE)

HSP 1 Score: 290 bits (742), Expect = 1.300e-93
Identity = 135/224 (60.27%), Postives = 172/224 (76.79%), Query Frame = 1
Query:  226 GASIFECMDGHVIARSTAYSITSRVLEAIIACPELDCKWPDGEAARANADLFRSCSTFGIIRNCIGAMDGLFIRVVKPTAAEAEEPNMFYSGHKKGFGMNFQQAICDAEYRIIAWTMNCPGSQNDRTAFKVAGFGKLLEELPEGFFIVGDAAYPASDRVLVPFPGTRLSISQDAYNFYQSQCRMAIEQTFGILVRRWGILWRPIEVSLGKLANVVKAVVRLHNF 897
            G SIFE MDG V A+STAY+I  RV++AI    E DC WP+G+ A     ++R  ST  +I  C+GAMDGLF+ + +P+      P  FYSGHKKGFGMNFQ A+C+A Y+I AWTMNCPGS NDRTAFK +GF ++L+ LP+G +IVGD AYPASD+VLVP+PGT L+ SQD+YNFYQSQ R+ IEQ FG +V+ WGILWRP++V LG++++V+ AVVRLHNF
Sbjct:   51 GGSIFEVMDGCVFAKSTAYAIVYRVIDAINQTREFDCVWPEGDDALDQCGVYRQRSTNNVIHMCVGAMDGLFVLIFEPSLRRHVNPRGFYSGHKKGFGMNFQ-AVCNARYKITAWTMNCPGSCNDRTAFKHSGFERVLKTLPKGAYIVGDGAYPASDQVLVPYPGTTLTPSQDSYNFYQSQARIFIEQAFGNMVKTWGILWRPLQVKLGRVSSVMNAVVRLHNF 273          
BLAST of mRNA_P-fluviatile_contig61.12896.1 vs. uniprot
Match: A0A6H5K540_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K540_9PHAE)

HSP 1 Score: 278 bits (712), Expect = 2.940e-89
Identity = 156/306 (50.98%), Postives = 178/306 (58.17%), Query Frame = 1
Query:    1 RSVLVLRERRPFADYIRPMLQDKTFAMRFRMDYPEFLVLVGLL*PALTKDDKMGRLRNGAIPVEYQVAMTLRWLAGASIFECMDGHVIARSTAYSITSRVLEAIIACPELDCKWPDGEAARANADLFRSCSTFGIIRNCIGAMDGLFIRVVKPTAAEAEEPNMFYSGHKKGFGMNFQQAICDAEYRIIAWTMNCPGSQNDRTAFKVAGFGKLLEELPEGFFIVGDAAYPASDRVLVPFPGTRLSISQDAYNFYQSQCRMAIEQTFGILVRRWGILWRPIEVSLGKLANVVKAVVRLHNFCMNNKIE 918
            RS LV R RRPF  YI+PMLQD TF+MRFRM+Y +F VLV  L PAL K++KMG LRNGAIPVEYQVAMTLRWLAG S +ECMDGHVIARSTAY                                                                                    A+CDA+YRI+AW MNCPGSQNDRTAF  +GF KLL  LPEG F+VGDAAY AS+RV+VPFPGT LS SQDA N+Y SQCRMAIEQT+GILV   G+    +E       +VV AVVRLHNFC + K++
Sbjct:   46 RSTLVARVRRPFETYIKPMLQDHTFSMRFRMEYDDFRVLVDHLRPALQKNEKMGLLRNGAIPVEYQVAMTLRWLAGGSTYECMDGHVIARSTAY-----------------------------------------------------------------------------------HAVCDAQYRIMAWMMNCPGSQNDRTAFNFSGFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYMSQCRMAIEQTYGILVSVVGMAKVVVE-------HVVNAVVRLHNFCRDRKVD 261          
BLAST of mRNA_P-fluviatile_contig61.12896.1 vs. uniprot
Match: A0A6H5KNF2_9PHAE (DDE Tnp4 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNF2_9PHAE)

HSP 1 Score: 271 bits (694), Expect = 1.410e-87
Identity = 122/172 (70.93%), Postives = 147/172 (85.47%), Query Frame = 1
Query:  403 IIRNCIGAMDGLFIRVVKPTAAEAEEPNMFYSGHKKGFGMNFQQAICDAEYRIIAWTMNCPGSQNDRTAFKVAGFGKLLEELPEGFFIVGDAAYPASDRVLVPFPGTRLSISQDAYNFYQSQCRMAIEQTFGILVRRWGILWRPIEVSLGKLANVVKAVVRLHNFCMNNKIE 918
            ++R C+GAMDGLF+R++KP+A E  EPN++Y+GHK GFGMNFQ A+CDA+YRI+AWTM+CPGSQNDRTAF  A F KLL  LPEG F+VGDAAY AS+RV+VPFPGT LS SQDA N+Y SQCRMAIEQT+GILVRRWGILWRP+EV + K  +VV AVVRLHNFC + K++
Sbjct:   17 VVRKCVGAMDGLFVRMIKPSAKEVAEPNLYYNGHKNGFGMNFQ-AVCDAQYRIVAWTMSCPGSQNDRTAFNFAWFDKLLAGLPEGHFVVGDAAYGASERVVVPFPGTSLSASQDACNYYVSQCRMAIEQTYGILVRRWGILWRPMEVRIEKFEHVVNAVVRLHNFCRDRKVD 187          
BLAST of mRNA_P-fluviatile_contig61.12896.1 vs. uniprot
Match: A0A6H5KD49_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD49_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 2.960e-60
Identity = 88/129 (68.22%), Postives = 108/129 (83.72%), Query Frame = 1
Query:  157 MGRLRNGAIPVEYQVAMTLRWLAGASIFECMDGHVIARSTAYSITSRVLEAIIACPELDCKWPDGEAARANADLFRSCSTFGIIRNCIGAMDGLFIRVVKPTAAEAEEPNMFYSGHKKGFGMNFQQAIC 543
            MG LRNGAIPVE QVAMTLRWLAG SI+ECMDGHVIARSTAY +TS V+ A+ ACPEL+CKWP+GE A   A+LFR+ S+  ++R C+GAMD LF+R++KP+A E  EPN++Y+GHKKGFGMNFQ  +C
Sbjct:    1 MGLLRNGAIPVEDQVAMTLRWLAGGSIYECMDGHVIARSTAYHVTSTVINALNACPELNCKWPEGEDAARAAELFRNRSSMDVVRKCVGAMDVLFVRMIKPSAKEVAEPNLYYNGHKKGFGMNFQVCMC 129          
BLAST of mRNA_P-fluviatile_contig61.12896.1 vs. uniprot
Match: A0A6H5JV75_9PHAE (DDE Tnp4 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV75_9PHAE)

HSP 1 Score: 207 bits (526), Expect = 5.570e-60
Identity = 114/297 (38.38%), Postives = 171/297 (57.58%), Query Frame = 1
Query:   40 DYIRPMLQDKTFAMRFRMDYPEFLVLVGLL*PALTKDDKMGR--LRNGAIPVEYQVAMTLRWLAGASIFECMDGHVIARSTAYSITSRVLEAIIACPELDCKW---PDGEAARANADLFRSCSTFGIIRNCIGAMDGLFIRVVKPTAAEAEEPNMFYSGHKKGFGMNFQQAICDAEYRIIAWTMNCPGSQNDRTAFKVAGFGKLLEELPEGFFIVGDAAYPASDRVLVPFPGTRLSISQDAYNFYQSQCRMAIEQTFGILVRRWGILWRPIEVSLGKLANVVKAVVRLHNFCMNNKI 915
            D+   + + K     +RM+ P F  L GLL P L   D   R   R GA+  + ++A+ LR +AGAS  +      +++ TA+SI  +V++AI +  E+   +    + E  R  A+ +   ST G  +  + A DGLF++ + PTA        +YSG K G+G+N Q A CDA YR  + +   PGS ND TA+  +     ++ LP GF+++GDAAYP SD +L P+PG  L + +DA+NFY SQ R+ IEQ FGILV +WGILW+P+ V      +++ A+ RLHNF  + K+
Sbjct:   79 DHAADLKKRKLLRRMYRMEEPVFNKLAGLLEPILQLYDYYARKRYRRGAVSTKIRLAIGLRMMAGASYIDAAMLFGVSKETAFSILWQVVDAINSTAEVGPFFFPQSEDECTRQAAE-WEEKSTGGAFQGVVAAGDGLFVKTLAPTALNTPNVLSYYSGSKCGYGVNVQ-ATCDANYRFCSMSCIAPGSTNDWTAWNHSDLSTAVKNLPPGFYMLGDAAYPLSDHLLTPYPGRGLPLDKDAFNFYLSQLRVRIEQAFGILVGQWGILWKPLRVQFAGRCDLITALFRLHNFLRDEKV 373          
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig61.12896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L6B6_9PHAE3.930e-13870.37DDE Tnp4 domain-containing protein n=3 Tax=Ectocar... [more]
A0A6H5K6M2_9PHAE4.220e-13261.87DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K3F2_9PHAE1.100e-13061.20DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JJA1_9PHAE2.160e-12058.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVS8_9PHAE3.540e-9753.10DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KCG0_9PHAE1.300e-9360.27DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5K540_9PHAE2.940e-8950.98DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5KNF2_9PHAE1.410e-8770.93DDE Tnp4 domain-containing protein n=2 Tax=Ectocar... [more]
A0A6H5KD49_9PHAE2.960e-6068.22Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JV75_9PHAE5.570e-6038.38DDE Tnp4 domain-containing protein n=4 Tax=Ectocar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig61contigP-fluviatile_contig61:874344..875949 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score168.7
Seed ortholog evalue3.5e-39
Seed eggNOG ortholog4792.ETI53028
EggNOG free text desc.nuclease activity
EggNOG OGs3QI3U@4776,KOG4585@1,KOG4585@2759
COG Functional cat.S
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categoryother localisation
Exons3
Model size918
Cds size762
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig61.12896.1prot_P-fluviatile_contig61.12896.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig61 874500..875949 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817032.5760012-UTR-P-fluviatile_contig61:874343..8744991622817032.5760012-UTR-P-fluviatile_contig61:874343..874499Porterinema fluviatile SAG_2381UTRP-fluviatile_contig61 874344..874499 +
1693570901.3595674-UTR-P-fluviatile_contig61:874343..8744991693570901.3595674-UTR-P-fluviatile_contig61:874343..874499Porterinema fluviatile SAG_2381UTRP-fluviatile_contig61 874344..874499 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817032.5870473-CDS-P-fluviatile_contig61:874499..8748741622817032.5870473-CDS-P-fluviatile_contig61:874499..874874Porterinema fluviatile SAG_2381CDSP-fluviatile_contig61 874500..874874 +
1693570901.523217-CDS-P-fluviatile_contig61:874499..8748741693570901.523217-CDS-P-fluviatile_contig61:874499..874874Porterinema fluviatile SAG_2381CDSP-fluviatile_contig61 874500..874874 +
1622817032.5974023-CDS-P-fluviatile_contig61:875217..8754901622817032.5974023-CDS-P-fluviatile_contig61:875217..875490Porterinema fluviatile SAG_2381CDSP-fluviatile_contig61 875218..875490 +
1693570901.534119-CDS-P-fluviatile_contig61:875217..8754901693570901.534119-CDS-P-fluviatile_contig61:875217..875490Porterinema fluviatile SAG_2381CDSP-fluviatile_contig61 875218..875490 +
1622817032.6094368-CDS-P-fluviatile_contig61:875835..8759491622817032.6094368-CDS-P-fluviatile_contig61:875835..875949Porterinema fluviatile SAG_2381CDSP-fluviatile_contig61 875836..875949 +
1693570901.5445228-CDS-P-fluviatile_contig61:875835..8759491693570901.5445228-CDS-P-fluviatile_contig61:875835..875949Porterinema fluviatile SAG_2381CDSP-fluviatile_contig61 875836..875949 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig61.12896.1

>prot_P-fluviatile_contig61.12896.1 ID=prot_P-fluviatile_contig61.12896.1|Name=mRNA_P-fluviatile_contig61.12896.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=254bp
MGRLRNGAIPVEYQVAMTLRWLAGASIFECMDGHVIARSTAYSITSRVLE
AIIACPELDCKWPDGEAARANADLFRSCSTFGIIRNCIGAMDGLFIRVVK
PTAAEAEEPNMFYSGHKKGFGMNFQQAICDAEYRIIAWTMNCPGSQNDRT
AFKVAGFGKLLEELPEGFFIVGDAAYPASDRVLVPFPGTRLSISQDAYNF
YQSQCRMAIEQTFGILVRRWGILWRPIEVSLGKLANVVKAVVRLHNFCMN
NKIE
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mRNA from alignment at P-fluviatile_contig61:874344..875949+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig61.12896.1 ID=mRNA_P-fluviatile_contig61.12896.1|Name=mRNA_P-fluviatile_contig61.12896.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1606bp|location=Sequence derived from alignment at P-fluviatile_contig61:874344..875949+ (Porterinema fluviatile SAG_2381)
CGCAGCGTTCTCGTCCTGCGAGAGAGGCGGCCTTTCGCGGACTACATCAG ACCCATGCTGCAAGATAAAACGTTCGCCATGCGCTTCCGCATGGACTATC CAGAATTCTTGGTTCTGGTTGGGTTGCTGTGACCTGCCCTGACAAAGGAT GACAAGATGGGGCGGCTGCGCAACGGCGCCATCCCTGTCGAGTACCAGGT GGCCATGACGTTGCGGTGGCTTGCCGGCGCGTCTATCTTCGAGTGTATGG ACGGCCACGTCATCGCGAGGAGTACGGCCTACAGCATTACGTCTCGTGTG CTCGAAGCCATCATCGCTTGCCCAGAGTTAGACTGCAAATGGCCCGACGG TGAGGCTGCCAGGGCAAATGCGGATTTGTTCCGCAGCTGCAGCACCTTCG GCATCATCAGGAACTGCATCGGCGCAATGGACGGGCTGTTTATCCGTGTG GTCAAACCCACTGCGGCGGAGGCCGAGGAGCCGAACATGTTTTACAGTGG GCACAAGAAGGGCTTCGGCATGAACTTCCAGGTGCGATTCGTTTTGCAGC ATATTCGATGTGTCAAATTCCGTTCTTTTCGTGCTCTGGCTACACTCATG CTCTGCTCCCCCTTGCGCCACCTTGGCGTGGGTCTGTGTAGCATCGGAAC GGGATCTCTGCTGCAAAAATTCTAGCTAAAAAGGACGAAAGAGACGGACG ATTTTATGGTCTTGCATCACAGTGATGGTTCGAATTAATCTGAAGTGAGA CGGTGTTAATTTGGGTACGTCGTGACGTGGGACGTAAAAATGTCGAAATT GCCCGTTTTTCTTCGTCACAAATTGGCCCTTGACTAATTGTTGGTATCCA TGCGTGGATACGTTCTCATCTCAGCAGGCAATATGCGACGCCGAGTATCG TATCATCGCGTGGACCATGAACTGCCCAGGCAGCCAGAACGACCGAACGG CGTTCAAGGTCGCGGGTTTCGGAAAGCTCTTGGAGGAATTGCCCGAGGGC TTTTTCATCGTCGGCGACGCGGCTTACCCGGCATCGGACCGCGTCCTCGT CCCATTCCCTGGAACGAGACTATCCATCAGCCAGGACGCGTACAACTTCT ACCAGTCTCAGTGTCGGATGGCTATCGAGCAGACGTTCGGCATTTTGGTG AGCAACGTGGTAGTTACAAATTGGGGTGCAGAGGAAGAGTCAGGCTGTCT TCGTTTGGCGTCAAGTGGAGCACGCGGTGCGTGAGTTCGGATTTCGAGCG AGAGTCCAATGCGTGACTTTCACACCTGTCGGTACGAACATGCACTGCTG TTTGCCTCTTTGAGTGTTTTAGGAGGGTGTGTTGCCTTCCGTATGTGCTT GCTTCTCCTGCCGCCGTGGTTGCGCCCCTTACAGGGCAAGGTAGGGTTCT GATGTGGGTCAACGACGGCCCTGTCTAGGAATCGGAACGCTACAAAGTCC AATTTTTCCCACCCACGATGGATTGCCACCTTTGATGAACAGGTTAGACG ATGGGGCATCCTTTGGCGGCCGATAGAGGTTAGCCTCGGCAAGTTGGCGA ACGTGGTCAAAGCCGTCGTCCGCCTCCACAACTTCTGCATGAACAACAAG ATCGAG
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Coding sequence (CDS) from alignment at P-fluviatile_contig61:874344..875949+

>mRNA_P-fluviatile_contig61.12896.1 ID=mRNA_P-fluviatile_contig61.12896.1|Name=mRNA_P-fluviatile_contig61.12896.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1524bp|location=Sequence derived from alignment at P-fluviatile_contig61:874344..875949+ (Porterinema fluviatile SAG_2381)
ATGGGGCGGCTGCGCAACGGCGCCATCCCTGTCGAGTACCAGGTGGCCAT
GACGTTGCGGTGGCTTGCCGGCGCGTCTATCTTCGAGTGTATGGACGGCC
ACGTCATCGCGAGGAGTACGGCCTACAGCATTACGTCTCGTGTGCTCGAA
GCCATCATCGCTTGCCCAGAGTTAGACTGCAAATGGCCCGACGGTGAGGC
TGCCAGGGCAAATGCGGATTTGTTCCGCAGCTGCAGCACCTTCGGCATCA
TCAGGAACTGCATCGGCGCAATGGACGGGCTGTTTATCCGTGTGGTCAAA
CCCACTGCGGCGGAGGCCGAGGAGCCGAACATGTTTTACAGTGGGCACAA
GAAGGGCTTCGGCATGAACTTCCAGATGGGGCGGCTGCGCAACGGCGCCA
TCCCTGTCGAGTACCAGGTGGCCATGACGTTGCGGTGGCTTGCCGGCGCG
TCTATCTTCGAGTGTATGGACGGCCACGTCATCGCGAGGAGTACGGCCTA
CAGCATTACGTCTCGTGTGCTCGAAGCCATCATCGCTTGCCCAGAGTTAG
ACTGCAAATGGCCCGACGGTGAGGCTGCCAGGGCAAATGCGGATTTGTTC
CGCAGCTGCAGCACCTTCGGCATCATCAGGAACTGCATCGGCGCAATGGA
CGGGCTGTTTATCCGTGTGGTCAAACCCACTGCGGCGGAGGCCGAGGAGC
CGAACATGTTTTACAGTGGGCACAAGAAGGGCTTCGGCATGAACTTCCAG
CAGGCAATATGCGACGCCGAGTATCGTATCATCGCGTGGACCATGAACTG
CCCAGGCAGCCAGAACGACCGAACGGCGTTCAAGGTCGCGGGTTTCGGAA
AGCTCTTGGAGGAATTGCCCGAGGGCTTTTTCATCGTCGGCGACGCGGCT
TACCCGGCATCGGACCGCGTCCTCGTCCCATTCCCTGGAACGAGACTATC
CATCAGCCAGGACGCGTACAACTTCTACCAGTCTCAGTGTCGGATGGCTA
TCGAGCAGACGTTCGGCATTTTGCAGGCAATATGCGACGCCGAGTATCGT
ATCATCGCGTGGACCATGAACTGCCCAGGCAGCCAGAACGACCGAACGGC
GTTCAAGGTCGCGGGTTTCGGAAAGCTCTTGGAGGAATTGCCCGAGGGCT
TTTTCATCGTCGGCGACGCGGCTTACCCGGCATCGGACCGCGTCCTCGTC
CCATTCCCTGGAACGAGACTATCCATCAGCCAGGACGCGTACAACTTCTA
CCAGTCTCAGTGTCGGATGGCTATCGAGCAGACGTTCGGCATTTTGGTTA
GACGATGGGGCATCCTTTGGCGGCCGATAGAGGTTAGCCTCGGCAAGTTG
GCGAACGTGGTCAAAGCCGTCGTCCGCCTCCACAACTTCTGCATGAACAA
CAAGATCGAGGTTAGACGATGGGGCATCCTTTGGCGGCCGATAGAGGTTA
GCCTCGGCAAGTTGGCGAACGTGGTCAAAGCCGTCGTCCGCCTCCACAAC
TTCTGCATGAACAACAAGATCGAG
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