mRNA_P-fluviatile_contig6.12697.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig6.12697.1 vs. uniprot
Match: D7G202_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G202_ECTSI) HSP 1 Score: 466 bits (1198), Expect = 1.220e-142 Identity = 333/613 (54.32%), Postives = 399/613 (65.09%), Query Frame = 3
Query: 825 TPRQAAISAKKELEDQKRRRAVFLKXXXXXMKSAAKAKQAELAAEQQRILKERAERAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAERSAAWERERQLKRXQREDRRQEQQVLMEGQEIFRQAKNLVKEEQERTDRLERAWRANRAHLDRSLGEMAGDRKADEACELRADRLQDQAALDRAAAEEQRLRRTSAQWRRNKKLLDQELERGAGKGMNPSELADELFQRAESRKEDAEYREAQEALRRQSLHRRRRSDLRRKHVGEALKEQERDIEADLNASREEGRMDVAAYRQECLRRERESLEGRRQKFLDDKALDAWRKELEQEAEAEDRELKDLTRQDIQAHGAELQAVERAEAEYRRQEQVRDRLYKEDEELRVKEQEAEERRIMLEDRESVSASKWREDQAELDRLEALRDTSSDKTKLEILEAIWARQSHPAASAXXXXXXXXXXXXXXXXXXGQPDLPPVTE---EAEADXXXXXXXISSGIGIKGRDSPSEIGFGSSDDDSILGGWPGSXXXXXXXXXXXXXXXXXXXXX------------SFMGQSAIGLGGNVRLAEEDDGEGAEEEDASRSWIGILNE 2618
TPRQAAI+AKKEL + A LK MK+ AKAKQAELAAEQQR L+ERAERA X XXXXXXXX LA RSAAWERER++K+ QR+ R+QEQ+++MEG E+FR+AK+ VK++QERTD+ ERAWRANRA+LD+SL E A D LDRA EE+RLRRTSAQW RNK+LLD+E+E+G+GK ++P +LADELFQRAESRKEDAEYREAQ+AL R+S R RRS+ RRK VGEAL E+ER+ EADL AS+EEG DV AYRQECLRR+RESL+ RQKF DD+A++ W K + + AE EDREL +L R D +A+ ++ ++ E EYRRQ+Q+ R KEDEELR++EQEAEERR+MLEDRESVSASK RE+QAELDRLE LRDT SDKTKLEILEA+WARQ+HPAA+A DL V E AE SSG+GIKGRDS GF SD+DS+L GWPGS XXXXXXX S + QSA+ L GNVRLAEE++ +EE S SW G L E
Sbjct: 91 TPRQAAIAAKKELTEXXXXXAAMLKQQELEMKNIAKAKQAELAAEQQRTLRERAERAKKQXLAAASXXXXXXXXQTEKQARALQEKMGEQRELNERLAKEERARRRESLAHRSAAWEREREMKKSQRKARKQEQRLVMEGHELFREAKSRVKKQQERTDKQERAWRANRAYLDKSLDEGAEDXXXXXXXXXXXXXXXXXXXLDRAEEEERRLRRTSAQWGRNKQLLDREIEQGSGKALDPFKLADELFQRAESRKEDAEYREAQKALWRESQQRHRRSEARRKVVGEALHEEEREREADLTASKEEGMRDVEAYRQECLRRDRESLDWHRQKFFDDRAVEEWTKGIAKAAETEDRELSELARLDSEAYKRRVEETQKLEEEYRRQQQIEGRFNKEDEELRMREQEAEERRVMLEDRESVSASKRREEQAELDRLEGLRDTPSDKTKLEILEAMWARQTHPAAAAAARGRRRQSSRRL--------DLRTVIEAGSSAELGTSGGSGSTSSGMGIKGRDSGG--GF-CSDEDSLLAGWPGSGPEDTGGXXXXXXXRVRTGSGCSAASSSALSMPSLLDQSAMALVGNVRLAEEEE----DEEAVSPSWDGSLQE 688
BLAST of mRNA_P-fluviatile_contig6.12697.1 vs. uniprot
Match: A0A6H5L5K2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5K2_9PHAE) HSP 1 Score: 412 bits (1059), Expect = 5.710e-125 Identity = 287/541 (53.05%), Postives = 350/541 (64.70%), Query Frame = 3
Query: 1188 LKRXQREDRRQEQQVLMEGQEIFRQAKNLVKEEQERTDRLERAWRANRAHLDRSLGEMAGDRKADEACELRADRLQDQAALDRAAAEEQRLRRTSAQWRRNKKLLDQELERGAGKGMNPSELADELFQRAESRKEDAEYREAQEALRRQSLHRRRRSDLRRKHVGEALKEQERDIEADLNASREEGRMDVAAYRQECLRRERESLEGRRQKFLDDKALDAWRKELEQEAEAEDRELKDLTRQDIQAHGAELQAVERAEAEYRRQEQVRDRLYKEDEELRVKEQEAEERRIMLEDRESVSASKWREDQAELDRLEALRDTSSDKTKLEILEAIWARQSHPAASAXXXXXXXXXXXXXXXXXXGQPDLPPVTE---EAEADXXXXXXXISSGIGIKGRDSPSEIGFGSSDDDSILGGWPGSXXXXXXXXXXXXXXXXXXXXX------------SFMGQSAIGLGGNVRLAEEDDGEGAEEEDASRSWIGILNEGD---ASNASLVELSQGQEGGGD--GEAERTATTGRAPAWGDVSVIEEQ 2750
+K+ QR+ R+QEQ+++MEG E E+TD+ ERAWRANRA+LD+SL E A D+ LDRA EE+RLRRTSAQWRRNK+LLD+E+ERG+GK ++P +LADELFQRAESRKEDAEYRE Q+AL R S RRRRS+ RRK VGEAL+E+ER+ EA+L AS+EEG DV AYRQECLRR+RESL+ RQKF DD+A++ W K + + AEAEDREL +L R D +A+ ++ ++ E EYRRQ+Q+ DR YKEDEELR++EQEAEERR+MLEDRESVSASK RE+QAELDRLE LRDT SDKTKLEILEA+WARQ+HPAA+A DL V E AE SSG+GIKGRDS GF SD+DS+L GWPGS XXXXX S + QSA+GL GNVRLAEE++ E A S SW G L + D A +VEL EGGG GE + APAW +S +E+Q
Sbjct: 1 MKKSQRKARKQEQRLVMEGHE-------------EQTDKQERAWRANRAYLDKSLDEGAEDKXXXXXXXXXXXXXXXXXXLDRAEEEERRLRRTSAQWRRNKQLLDREIERGSGKALDPFKLADELFQRAESRKEDAEYREDQKALWRASQQRRRRSEARRKVVGEALQEEEREREANLTASKEEGMRDVEAYRQECLRRDRESLDWHRQKFFDDRAVEEWTKGIAKAAEAEDRELSELARLDCEAYKRRVEEAQKLEEEYRRQQQIEDRFYKEDEELRMREQEAEERRVMLEDRESVSASKRREEQAELDRLEGLRDTPSDKTKLEILEAMWARQTHPAAAAAARGRRRQSSRRL--------DLRTVIEAGSSAELGTSGGSGSTSSGMGIKGRDSGG--GF-CSDEDSLLAGWPGSEPEDTGGGXXXXXLRVRAGSGCSAASSSALSMPSLLDQSAMGLVGNVRLAEEEEDEVA----VSASWDGSLQQVDDAAAGGKPVVELPLEDEGGGQRSGETHYPPSPANAPAWEGLSHLEDQ 513 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12697.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig6.12697.1 >prot_P-fluviatile_contig6.12697.1 ID=prot_P-fluviatile_contig6.12697.1|Name=mRNA_P-fluviatile_contig6.12697.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=1080bp MTRNDCSSNSAPPSRHPRPLPAGGVRHIAGCLPRPLPFFRHAVSLAKISQback to top mRNA from alignment at P-fluviatile_contig6:3717741..3731865- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig6.12697.1 ID=mRNA_P-fluviatile_contig6.12697.1|Name=mRNA_P-fluviatile_contig6.12697.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=14125bp|location=Sequence derived from alignment at P-fluviatile_contig6:3717741..3731865- (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig6:3717741..3731865- >mRNA_P-fluviatile_contig6.12697.1 ID=mRNA_P-fluviatile_contig6.12697.1|Name=mRNA_P-fluviatile_contig6.12697.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=6480bp|location=Sequence derived from alignment at P-fluviatile_contig6:3717741..3731865- (Porterinema fluviatile SAG_2381)back to top |