mRNA_P-fluviatile_contig6.12659.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig6.12659.1 vs. uniprot
Match: D7G1U7_ECTSI (CUE domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1U7_ECTSI) HSP 1 Score: 291 bits (744), Expect = 4.380e-89 Identity = 153/185 (82.70%), Postives = 168/185 (90.81%), Query Frame = 3
Query: 645 ERRGRRVALPEHFLRTPGWNGGG-GEISSDPQVAADAKLAMMLQNEAFQRELQSHPDLAHLGRKSGTGDSRGNPFGGGGDGPSIKEQMTTMGNADIRRKVEELAVRWKMKDPGRAEETTQYSSVPLMASHRDEPEDQAEVVHFSQNSATRRSTSGGPNRTGGLFRADSGGEEQLADPRRANKKDR 1196
+RRGRRVALPE FLRTPGW GGG GE+SSDPQVAADAKLAMMLQNEAFQRELQSHPDLA+LGR S +GDSRGN FG GGDGPSIKEQMT+MGN DIRRKV+ELAVRWKMKDPGRA++TT+YSSVPLM+S D+ +DQAEVVHFSQN+ATRRS+SGG G+FRADS GEEQLADPRRANKKDR
Sbjct: 161 DRRGRRVALPEQFLRTPGWTGGGAGEVSSDPQVAADAKLAMMLQNEAFQRELQSHPDLAYLGRGSRSGDSRGNAFGMGGDGPSIKEQMTSMGN-DIRRKVDELAVRWKMKDPGRADQTTEYSSVPLMSSVDDDADDQAEVVHFSQNNATRRSSSGGSAAGVGVFRADSAGEEQLADPRRANKKDR 344 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12659.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig6.12659.1 >prot_P-fluviatile_contig6.12659.1 ID=prot_P-fluviatile_contig6.12659.1|Name=mRNA_P-fluviatile_contig6.12659.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=204bp MAQVAAAAARGGGGGGGGRERRGRRVALPEHFLRTPGWNGGGGEISSDPQback to top mRNA from alignment at P-fluviatile_contig6:3338398..3352210+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig6.12659.1 ID=mRNA_P-fluviatile_contig6.12659.1|Name=mRNA_P-fluviatile_contig6.12659.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=13813bp|location=Sequence derived from alignment at P-fluviatile_contig6:3338398..3352210+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig6:3338398..3352210+ >mRNA_P-fluviatile_contig6.12659.1 ID=mRNA_P-fluviatile_contig6.12659.1|Name=mRNA_P-fluviatile_contig6.12659.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1224bp|location=Sequence derived from alignment at P-fluviatile_contig6:3338398..3352210+ (Porterinema fluviatile SAG_2381)back to top |