mRNA_P-fluviatile_contig6.12652.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig6.12652.1 vs. uniprot
Match: A0A6H5KNU8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNU8_9PHAE) HSP 1 Score: 531 bits (1367), Expect = 3.350e-162 Identity = 474/720 (65.83%), Postives = 515/720 (71.53%), Query Frame = 2
Query: 116 GGLLSMSSGEESPENTVASSRRQSHGSQ--MDALELQQIRARTAGASVPLPGTASAESADAAIKAMQQELNRKNMSLAKAEEKCLVLEARQEDFAHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQLAAVPR----GD--------AACAAEEESSRLKSVIEDLEASRKLTAKRLRDIMKKCSQNEERFLAAVEAEKLRAERFEEMLEDCRRERDAECERLQQNIDSLKEQLDVKVATVKHLWEKVAAIRRTKAVGSEDLKTSLDEAIAARESLSRLAEDQQEQIDRLRRRAKRKEEEITKTVLARLQTQGGPGSTLIDEDELSQA------VGSRRNDGGRESLDSAQGTTRGASAAVRSQLADIKAERMELMYKCQRQEQQVADLRNLVDEIAKLESGAPDAP--GGDSSGNWETQSVCSDISGMSLDSSLMPRGVEDIAEKDLRELAKWFKSRSNERRRLLKRYKAGRQKTEALAARKQAGGDLFASARGIKIATKGGVGRSPTSDT------------------------------------ESXXXXXXXXXXXXXXXXXXXXXXXXARLAKAGXXXXXXXXXXXXXXXXAGATSPRA--ASGRARAASPCSTAG-NSRPAVRA----RHNSGDGGSGAVGGGGRVAPPAREKDLRSLRSPRAGTRAMGGRAGWL 2080
GGLL GE SPENTV+S+RR S SQ M LELQQ+RA TAG +A +A A ++M++EL +KNMSLAKAEEKCLVLEARQ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX QL A+P+ GD A+ AE E +RLKS+IEDLE+SRK+TA+RLRDIMKKCSQNEERFLAAVE EK RA+RFEEMLEDCRRERDAECERLQ NIDS KEQLDVKVATVKHLWEKVAAIRR KAVGSEDLK LDEA++AR+SLSRLAEDQQEQIDRLRRRAKRKEEEITKTVLARLQ Q GS++ID+DE+S R+SLDSA GTTRGASAA+RSQLADIK EQQVADLR LVDEIAKLESGAPDA GG NWETQS CSD+SG+SLDSSLMPRGVEDI EKDLRELAKWFKSRS+ERRRLLKRYK GRQKTEALAARKQAGGD+FAS RG KI TKGG+ R+PTSDT +S XXXXXXXXXXXXXXXXX ARLA+AG XXXXXXXX +SP++ A GRAR SP S G SR A A R NS GR R+ +LRS RSPRAGTRAMGGR GWL
Sbjct: 1983 GGLLPQ--GERSPENTVSSARRLSPESQLQMGKLELQQVRAVTAGTDPVRQNDDAAAAAVAKAESMKRELEKKNMSLAKAEEKCLVLEARQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAANYEAQLTALPKTEEDGDETAGAVVAASGGAETEVARLKSMIEDLESSRKMTARRLRDIMKKCSQNEERFLAAVETEKARADRFEEMLEDCRRERDAECERLQHNIDSQKEQLDVKVATVKHLWEKVAAIRRVKAVGSEDLKAHLDEAVSARDSLSRLAEDQQEQIDRLRRRAKRKEEEITKTVLARLQAQEASGSSVIDDDEMSLGDAXXXXXXXXXXXXXRDSLDSAAGTTRGASAALRSQLADIK-------------EQQVADLRRLVDEIAKLESGAPDAAASGGXGGDNWETQSGCSDLSGVSLDSSLMPRGVEDIPEKDLRELAKWFKSRSSERRRLLKRYKTGRQKTEALAARKQAGGDVFASVRG-KIPTKGGLARTPTSDTAGRPESTGLPELLTTCTTNIFGLRHAHNLPVKQESVKSARXXXXXXXXXXXXXXXXXASNISARLARAGAIPSSXXXXXXXXTF----SSPKSERAGGRARGTSPRSATGATSRQAAAAGRSARRNSXXXXXXXXXXHGR-GRTGRDVELRSGRSPRAGTRAMGGRTGWL 2681 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12652.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig6.12652.1 >prot_P-fluviatile_contig6.12652.1 ID=prot_P-fluviatile_contig6.12652.1|Name=mRNA_P-fluviatile_contig6.12652.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=651bp MSSGEESPENTVASSRRQSHGSQMDALELQQIRARTAGASVPLPGTASAEback to top mRNA from alignment at P-fluviatile_contig6:3262567..3272844+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig6.12652.1 ID=mRNA_P-fluviatile_contig6.12652.1|Name=mRNA_P-fluviatile_contig6.12652.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=10278bp|location=Sequence derived from alignment at P-fluviatile_contig6:3262567..3272844+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig6:3262567..3272844+ >mRNA_P-fluviatile_contig6.12652.1 ID=mRNA_P-fluviatile_contig6.12652.1|Name=mRNA_P-fluviatile_contig6.12652.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3906bp|location=Sequence derived from alignment at P-fluviatile_contig6:3262567..3272844+ (Porterinema fluviatile SAG_2381)back to top |