mRNA_P-fluviatile_contig6.12588.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig6.12588.1
Unique NamemRNA_P-fluviatile_contig6.12588.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
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BLAST of mRNA_P-fluviatile_contig6.12588.1 vs. uniprot
Match: D7FJ06_ECTSI (Epimerase/dehydrogenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJ06_ECTSI)

HSP 1 Score: 413 bits (1061), Expect = 1.100e-143
Identity = 225/269 (83.64%), Postives = 239/269 (88.85%), Query Frame = 1 
Query:   13 HSLFLALLRVGLTTAFVAPCMRRSFVGTARGIHSGARGTGLEMAYGKVFVAGGATGVGRAVIDKLLEGGSEVVALVRRGDAKAELDAIDGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDETKRVDYVGNRNVIESAGILGITRVIMVTSVGCGSSREAVSDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTESTKAAGVINRADVADLAVKALNSPSTVRKILTAVDPDIESSYSSTENFEAFA 819
            HSL L+L+ +G  T+FV PC      GTAR   SG + TGL MAYGKVFVAGGA GVGRAVIDKL++ GSEVVALVRR DAK EL+AI GVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDE+KRVDY GNRNVIESAGILGITRV+MVTSVGCGSSREA+SDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTE TKAAGVINRADVADLAV+ALNSPSTVRKILTAVDP ++SSY S E   AFA
Sbjct:    5 HSLCLSLVYLGTVTSFVTPCAWNKVTGTARSTISG-QSTGLRMAYGKVFVAGGAKGVGRAVIDKLVDQGSEVVALVRREDAKDELEAIKGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDESKRVDYAGNRNVIESAGILGITRVVMVTSVGCGSSREAISDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTEDTKAAGVINRADVADLAVQALNSPSTVRKILTAVDPAVQSSYDSAEKPAAFA 272
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BLAST of mRNA_P-fluviatile_contig6.12588.1 vs. uniprot
Match: A0A835Z825_9STRA (Epimerase/dehydrogenase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z825_9STRA)

HSP 1 Score: 280 bits (716), Expect = 2.070e-91
Identity = 162/263 (61.60%), Postives = 191/263 (72.62%), Query Frame = 1 
Query:   28 ALLRVGLTTAFVAPCMRRSFVGTARGIHSGARGTGLEMAYGKVFVAGGATGVGRAVIDKLLEGGSEVVALVRRGDAKAELDAIDGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDETKRVDYVGNRNVIESAGILGITRVIMVTSVGCGSSREAVSDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTESTKAAGVINRADVADLAVKALNSPSTVRKILTAVDPDIESSYSSTENFEAF 816
            AL  V    AF+AP    S   TAR   S      L MAY KVFVAGG++GVGR V+++L+  G +VVA+VRR DA  EL+AI+GV+AV+ DALDLKGVE  LDGCDAAITTLGG+       RVDY GNRNVIESAGILG+TRVI+VTSVGCG SR A+SDQVY  LEKAL AKT AE ML KYYTN+ WTIIRPGGL++   TG AILTE+   AG+I RADVAD+ V+AL++  T +K+ TAVDP I SS+      EAF
Sbjct:   10 ALAAVSCVEAFLAPM---SVARTARSSSS------LSMAYNKVFVAGGSSGVGREVVNQLVSKGKQVVAIVRREDALEELNAIEGVTAVMVDALDLKGVEGALDGCDAAITTLGGS---SGENRVDYEGNRNVIESAGILGVTRVILVTSVGCGDSRGAISDQVYTSLEKALVAKTKAEKMLQKYYTNAFWTIIRPGGLQTAEGTGKAILTENKTIAGIIRRADVADVVVRALDNDGTHKKVFTAVDPSIPSSFGDASKAEAF 260
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BLAST of mRNA_P-fluviatile_contig6.12588.1 vs. uniprot
Match: B7FVE3_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVE3_PHATC)

HSP 1 Score: 280 bits (716), Expect = 2.450e-91
Identity = 165/268 (61.57%), Postives = 198/268 (73.88%), Query Frame = 1 
Query:   16 SLFLALLRVGLTTAFVAPCMRRSFVGTARGIHSGARGTGLEMAYGKVFVAGGATGVGRAVIDKLLEGGSEVVALVRRGDAKAELDAIDGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDETKRVDYVGNRNVIESAGILGITRVIMVTSVGCGSSREAVSDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTESTKAAGVINRADVADLAVKALNSPSTVRKILTAVDPDIESSYSSTENFEAFA 819
            SL L+   VG+T+AFVAP  +    GT R   S    T L+ AY KVFVAGG  GVGR ++D+LL  GSEVVALVR  DA  EL+AI+GV+A+  DA + K VE  +DGCDAAITTLGGA   D  KRVDY GN NVIESAGILG+TRVI+VTSVGCGSS+EA    V++ L++ L AK  AEN+L+KYYTN  WTIIRPGGLKS+ ATG AILTE T+A G I+R DVA LA+KALNS +T RK+LTA+DP I+S+ S  +  EAFA
Sbjct:    6 SLLLSFALVGVTSAFVAP--KAPTFGTTRFPVSS---TSLD-AYKKVFVAGGTRGVGRCIVDQLLGQGSEVVALVRSEDALKELNAIEGVTAIRGDAFEQKAVENAMDGCDAAITTLGGATS-DGGKRVDYDGNSNVIESAGILGVTRVILVTSVGCGSSKEAAPPNVFEALKEVLTAKEKAENVLIKYYTNMNWTIIRPGGLKSEPATGKAILTEDTRAIGTIHREDVAALAIKALNSSNTERKVLTAIDPSIDSAVSDGKQVEAFA 266
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BLAST of mRNA_P-fluviatile_contig6.12588.1 vs. uniprot
Match: A0A7S3L6R6_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L6R6_9STRA)

HSP 1 Score: 266 bits (681), Expect = 4.340e-86
Identity = 143/231 (61.90%), Postives = 176/231 (76.19%), Query Frame = 1 
Query:  127 TGLEMAYGKVFVAGGATGVGRAVIDKLLEGGSEVVALVRRGDAKAELDAIDGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDETKRVDYVGNRNVIESAGILGITRVIMVTSVGCGSSREAVSDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTESTKAAGVINRADVADLAVKALNSPSTVRKILTAVDPDIESSYSSTENFEAFA 819
            T L   Y  VFVAGG+ GVGR VIDKLLE GS+VVALVR+ +  A+L++I+GV+A+V DA D K VE  +DGCDAAITTLGG+ + D   R+DY GN NVIESAGILG+ R+I+VTSVGCGSS+EA  + V++ L++ L AK  AEN+L+KYYTNS W+IIRPGGLKS+ ATG AILTE  K  G I+R DVA L V+ L SP T RKILTA+DP IES+ ++    EAFA
Sbjct:   33 TALFATYKNVFVAGGSKGVGRLVIDKLLEQGSKVVALVRKEEVAADLNSIEGVTAIVGDAFDQKTVENAMDGCDAAITTLGGSTQ-DTGARIDYAGNSNVIESAGILGVQRIILVTSVGCGSSKEAAPEAVFEALKEVLLAKEKAENVLIKYYTNSNWSIIRPGGLKSEPATGNAILTEDNKTIGTIHREDVASLVVRCLESPKTERKILTAIDPSIESAVATGAEVEAFA 262
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BLAST of mRNA_P-fluviatile_contig6.12588.1 vs. uniprot
Match: A0A7S0AIJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AIJ9_9STRA)

HSP 1 Score: 267 bits (682), Expect = 4.840e-86
Identity = 146/230 (63.48%), Postives = 175/230 (76.09%), Query Frame = 1 
Query:  127 TGLEMA--------YGKVFVAGGATGVGRAVIDKLLEGGSEVVALVRRGDAKAELDAIDGVSAVVCDALDLKGVEAVLDGCDAAITTLGGA--PEGDETKRVDYVGNRNVIESAGILGITRVIMVTSVGCGSSREAVSDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTESTKAAGVINRADVADLAVKALNSPSTVRKILTAVDPDIESS 786
            TGL MA        Y KVFVAGG+ GVGRAV+D LL  GSEVVALVR  +A+AEL A+DGV+    DA D K VE  +DGCDAAITT+G    P G+  KRVDYVGN NVIE+AGILG+TRV++VTS+GCGSS+EA    V++VL+  L AK  AEN+L+KYYTN  WTI+RPGGLKS+ ATGTAILTE+  A G I+R DVADL V+ALNS +T RKIL+AVDP+I +S
Sbjct:   43 TGLRMAGDAAPASKYSKVFVAGGSRGVGRAVVDGLLSAGSEVVALVRTDEAEAELSALDGVTVARGDAFDYKAVEGAMDGCDAAITTMGQGTDPVGENGKRVDYVGNNNVIEAAGILGVTRVVLVTSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNMNWTIVRPGGLKSEPATGTAILTENNLAIGSIHREDVADLVVQALNSGNTERKILSAVDPEISAS 272
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BLAST of mRNA_P-fluviatile_contig6.12588.1 vs. uniprot
Match: A0A7S2UDM5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UDM5_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.860e-81
Identity = 133/214 (62.15%), Postives = 168/214 (78.50%), Query Frame = 1 
Query:  145 YGKVFVAGGATGVGRAVIDKLLEGGSEVVALVRRGDAKAELDAIDGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDETKRVDYVGNRNVIESAGILGITRVIMVTSVGCGSSREAVSDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTESTKAAGVINRADVADLAVKALNSPSTVRKILTAVDPDIESS 786
            Y KVFVAGG+ GVGR V+DKL+  G+ VVALVR  +A AEL+A+DGV+AV+ DA D K VE  +DGCDAA++TLGG    +  +RVDY GN NVIE+AGILG+TRV+++TS+GCGSS+EA    V++VL+  L AK  AEN+L+KYYTN+ WTIIRPGGLKS+ ATG AILTE   A G I+R DVA LA++AL SP T +KIL+AVDP+I S+
Sbjct:   53 YNKVFVAGGSKGVGRLVVDKLVGSGTGVVALVRSEEAAAELNALDGVTAVIGDAFDYKAVEGAMDGCDAAMSTLGGGTVEEGKQRVDYEGNSNVIEAAGILGVTRVVLITSIGCGSSKEAAPPSVFEVLKDVLSAKERAENILIKYYTNTNWTIIRPGGLKSEPATGKAILTEDNMAIGSIHREDVAALAIQALTSPKTKQKILSAVDPEITSA 266
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BLAST of mRNA_P-fluviatile_contig6.12588.1 vs. uniprot
Match: A0A6U3NUE1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3NUE1_9STRA)

HSP 1 Score: 253 bits (647), Expect = 9.950e-81
Identity = 135/215 (62.79%), Postives = 165/215 (76.74%), Query Frame = 1 
Query:  142 AYGKVFVAGGATGVGRAVIDKLLEGGSEVVALVRRGDAKAELDAIDGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDETKRVDYVGNRNVIESAGILGITRVIMVTSVGCGSSREAVSDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTESTKAAGVINRADVADLAVKALNSPSTVRKILTAVDPDIESS 786
            AY KVFVAGG+ GVGR ++DKL+E GSEVVALVR  +A  EL A++GV+A++ DA + K VE  +DGCDAAITTLG    G++ KRVDY GN NVIE+AGILG+TRVI++TS+GCGSS+EA    V++VL+  L AK  AEN+L+KYYTN  WTIIRPGGLKS+  TG AILTE   A G I+R DVA LAVKAL S  T RK+L+AVD  I S+
Sbjct:   50 AYKKVFVAGGSKGVGRHIVDKLIEDGSEVVALVRSQEAIDELSALEGVTAILGDAFEYKNVEGAMDGCDAAITTLGQGTAGEDGKRVDYEGNSNVIEAAGILGVTRVILITSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNMNWTIIRPGGLKSEPGTGEAILTEDAMAIGSIHREDVAALAVKALTSSKTERKVLSAVDQSIPSA 264
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BLAST of mRNA_P-fluviatile_contig6.12588.1 vs. uniprot
Match: A0A7S2HK64_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HK64_9STRA)

HSP 1 Score: 252 bits (644), Expect = 3.120e-80
Identity = 139/225 (61.78%), Postives = 169/225 (75.11%), Query Frame = 1 
Query:  112 SGARGTGLEMAYGKVFVAGGATGVGRAVIDKLLEGGSEVVALVRRGDAKAELDAIDGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDETKRVDYVGNRNVIESAGILGITRVIMVTSVGCGSSREAVSDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTESTKAAGVINRADVADLAVKALNSPSTVRKILTAVDPDIESS 786
            S A  T L+ AY KVFVAGG+ GVGR ++DKL+E GSEVVALVR  +A  EL AIDGV+ ++ DA + K VE  +DGCDAAITTLG     ++ KRVDY GN NVIE+AGILG+TRVI+VTS+GCGSS+EA    V++VL+  L AK  AEN+L+KYYTN+ WTI+RPGGLKS+ ATG AILTE   A G I+R DVA L VKAL S  T RK+L+AVD  I S+
Sbjct:   44 SSATTTSLD-AYKKVFVAGGSKGVGRLIVDKLIEDGSEVVALVRSQEAVDELGAIDGVTPILGDAFEYKNVENAMDGCDAAITTLGQGSATEDGKRVDYEGNSNVIEAAGILGVTRVILVTSIGCGSSKEAAPPSVFEVLKDVLAAKERAENVLIKYYTNTNWTIVRPGGLKSEPATGEAILTEDAMAIGSIHREDVASLIVKALTSSKTERKVLSAVDQSIPSA 267
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BLAST of mRNA_P-fluviatile_contig6.12588.1 vs. uniprot
Match: A0A7S2V5P0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5P0_9STRA)

HSP 1 Score: 251 bits (642), Expect = 4.840e-80
Identity = 134/213 (62.91%), Postives = 162/213 (76.06%), Query Frame = 1 
Query:  133 LEMAYGKVFVAGGATGVGRAVIDKLLEGGSEVVALVRRGDAKAELDAIDGVSAVVCDALDLKGVEAVLDGCDAAITTLGGAPEGDETKRVDYVGNRNVIESAGILGITRVIMVTSVGCGSSREAVSDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTESTKAAGVINRADVADLAVKALNSPSTVRKILTAVDP 771
            LEMAY KVFVAG A GVGR ++++L+    EVVA VRR +AK EL  + GV+A++ DAL  K VE  +DGCDAA+TTLG AP  ++  +VDY GN NVIE+AGILG+TR I+VTSVGCG S+EAVS   Y+ LE ALKAK  AE +L KYYTNS+WT+IRPGGL +  AT  A+LTE+  A GVINRADVA L VKAL+S  T RK+LTAVDP
Sbjct:   61 LEMAYKKVFVAGAAKGVGRQIVEQLVAKDVEVVAFVRREEAKQELGGLKGVTAILGDALVQKDVEGAMDGCDAAVTTLGSAPTDEQRWKVDYDGNVNVIEAAGILGVTRCILVTSVGCGDSKEAVSPDAYEKLENALKAKEKAERVLTKYYTNSDWTVIRPGGLMNGEATSAAVLTENKMACGVINRADVASLVVKALDSQKTFRKVLTAVDP 273
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BLAST of mRNA_P-fluviatile_contig6.12588.1 vs. uniprot
Match: B8C036_THAPS (NAD(P)-bd_dom domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C036_THAPS)

HSP 1 Score: 248 bits (633), Expect = 1.230e-78
Identity = 136/222 (61.26%), Postives = 167/222 (75.23%), Query Frame = 1 
Query:  130 GLEMAYGKVFVAGGATGVGRAVIDKLLEGGSEVVALVRRGDAKAELDAIDGVSAVVCDALDLKGVEAVLDGCDAAITTLGGA---PEGDETKRVDYVGNRNVIESAGILGITRVIMVTSVGCGSSREAVSDQVYQVLEKALKAKTLAENMLLKYYTNSEWTIIRPGGLKSDAATGTAILTESTKAAGVINRADVADLAVKALNSPSTVRKILTAVDPDIESS 786
            G   +Y KVFVAGG+ GVGR V+DKL+  G+EVVALVR  +A  EL A+DGV+A+  DA+D K VE  +DGCDAAITTLGG     EG+  K VDYVGN NVIE+AGILG+TRV++VTS+GCGSS+EA    VY+VL+  L  K  AE +L +YYTN  WTI+RPGGL S+  TG A+LTE T A G I+R DVADL VKAL+S +T +KIL+AVDP IES+
Sbjct:   43 GQGDSYKKVFVAGGSKGVGRLVVDKLVSNGAEVVALVRSDEAVDELSALDGVTAIKGDAMDYKTVEGAMDGCDAAITTLGGGHNVAEGE--KYVDYVGNNNVIEAAGILGVTRVVLVTSIGCGSSKEATPPSVYEVLKDVLVQKEKAEKVLTRYYTNMNWTIVRPGGLVSEPPTGKAVLTEDTMAIGSIHRGDVADLVVKALSSKNTEKKILSAVDPSIESA 262
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12588.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FJ06_ECTSI1.100e-14383.64Epimerase/dehydrogenase n=1 Tax=Ectocarpus silicul... [more]
A0A835Z825_9STRA2.070e-9161.60Epimerase/dehydrogenase n=1 Tax=Tribonema minus Ta... [more]
B7FVE3_PHATC2.450e-9161.57Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A7S3L6R6_9STRA4.340e-8661.90Hypothetical protein n=1 Tax=Amphora coffeiformis ... [more]
A0A7S0AIJ9_9STRA4.840e-8663.48Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A7S2UDM5_9STRA1.860e-8162.15Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A6U3NUE1_9STRA9.950e-8162.79Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2HK64_9STRA3.120e-8061.78Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A7S2V5P0_9STRA4.840e-8062.91Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
B8C036_THAPS1.230e-7861.26NAD(P)-bd_dom domain-containing protein n=1 Tax=Th... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:2593530..2598283 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score416.8
Seed ortholog evalue8e-114
Seed eggNOG ortholog2880.D7FJ06
EggNOG free text desc.divinyl chlorophyllide a 8-vinyl-reductase activity
EggNOG OGsCOG0702@1,KOG1203@2759
COG Functional cat.GM
BiGG ReactioniRC1080.CRv4_Au5_s6_g13409_t1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionepimerase/dehydrogenase
Ec32 orthologEc-07_004910.1
Exons4
Model size825
Cds size825
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12588.1prot_P-fluviatile_contig6.12588.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig6 2593530..2598283 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622817002.2347777-CDS-P-fluviatile_contig6:2593529..25936061622817002.2347777-CDS-P-fluviatile_contig6:2593529..2593606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 2593530..2593606 +
1693570751.8048797-CDS-P-fluviatile_contig6:2593529..25936061693570751.8048797-CDS-P-fluviatile_contig6:2593529..2593606Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 2593530..2593606 +
1622817002.2476044-CDS-P-fluviatile_contig6:2593878..25940811622817002.2476044-CDS-P-fluviatile_contig6:2593878..2594081Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 2593879..2594081 +
1693570751.8150992-CDS-P-fluviatile_contig6:2593878..25940811693570751.8150992-CDS-P-fluviatile_contig6:2593878..2594081Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 2593879..2594081 +
1622817002.2619958-CDS-P-fluviatile_contig6:2597207..25974521622817002.2619958-CDS-P-fluviatile_contig6:2597207..2597452Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 2597208..2597452 +
1693570751.8244765-CDS-P-fluviatile_contig6:2597207..25974521693570751.8244765-CDS-P-fluviatile_contig6:2597207..2597452Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 2597208..2597452 +
1622817002.272333-CDS-P-fluviatile_contig6:2597983..25982831622817002.272333-CDS-P-fluviatile_contig6:2597983..2598283Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 2597984..2598283 +
1693570751.8338034-CDS-P-fluviatile_contig6:2597983..25982831693570751.8338034-CDS-P-fluviatile_contig6:2597983..2598283Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 2597984..2598283 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig6.12588.1

>prot_P-fluviatile_contig6.12588.1 ID=prot_P-fluviatile_contig6.12588.1|Name=mRNA_P-fluviatile_contig6.12588.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=275bp
MALPHSLFLALLRVGLTTAFVAPCMRRSFVGTARGIHSGARGTGLEMAYG
KVFVAGGATGVGRAVIDKLLEGGSEVVALVRRGDAKAELDAIDGVSAVVC
DALDLKGVEAVLDGCDAAITTLGGAPEGDETKRVDYVGNRNVIESAGILG
ITRVIMVTSVGCGSSREAVSDQVYQVLEKALKAKTLAENMLLKYYTNSEW
TIIRPGGLKSDAATGTAILTESTKAAGVINRADVADLAVKALNSPSTVRK
ILTAVDPDIESSYSSTENFEAFAF*
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mRNA from alignment at P-fluviatile_contig6:2593530..2598283+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig6.12588.1 ID=mRNA_P-fluviatile_contig6.12588.1|Name=mRNA_P-fluviatile_contig6.12588.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4754bp|location=Sequence derived from alignment at P-fluviatile_contig6:2593530..2598283+ (Porterinema fluviatile SAG_2381)
ATGGCTCTCCCCCACAGCCTCTTCCTCGCGCTCTTGCGTGTGGGGTTGAC
AACCGCATTTGTGGCTCCTTGCATGAGGTGAGCAACGACAGAGTACTCTC
GCAGGCAACTGGAAAAAACATGAAGAGCAGCAGGATTCGAGCGCCGGTGT
GTCCTCCCTCGGCTATCGCACCACCACGCCTTTCGTCGCCGCCATGATGC
TCTCCTTGTCGCGTCATTCTCTCCTTTCCTGCCTCTCCCGTGGCATGACC
TAACTTCTAAGAATATGCATATGCGCTACGAGGAATGCATGAAGGGATGT
GATATTATCACGCCGCCGCCGTCCGCTCTTGGCTCTCTCTGCTGTTTAGG
CGATCCTTTGTCGGAACCGCGCGCGGTATCCATTCCGGTGCCCGGGGAAC
TGGTTTGGAAATGGCGTACGGGAAGGTTTTCGTCGCCGGCGGTGCCACGG
GGGTAGGAAGGGCTGTGATCGACAAGCTGTTGGAAGGGGGATCGGAAGTC
GTGGCTCTGGTCCGGAGGGGAGACGCCAAGGCCGAATTGGATGCAATAGA
CGGTGCGCATTCAAAAACTTGTCTTCCAGGATCCTCGGCTTTAACAACTT
CCAAACCATTCTTTCACACGCGTTGCCTGCTACAACAACTGGACGCGAAG
TATTTCATTTGTTGGTGATTCCGTCATTATGATGGTTGCCTTTTCCATCA
TATGCAAGGTGGATGCCCAATTCTTGCAGACATTTTCCTCGCGAAACAAG
GAGGCTTGCATGAAGATCTGACTCAAGGATGGGTCTATACAGAAACATCA
ACCAGTCCGAATCTATAGGCTATCTAATATCGAAATTCGACTTCGAAGAT
GGAGCTGCGTCCGCGAAGAGCAGCAGCTTCGAAAAATGGAAATCGGAAAT
CGAAGGTGACTAGGAAGGCAGTAGAGAAGCCTCGACGATAGCCCATGCGA
CTAACTTAAACGAGGACCGAGAGGAGTGTAGGGCACCCAGGAAACAAACG
ATGGCTCTTAACAACAGCCTTCGTAAGGTCGACACATAGATCTCGATCTC
GCGTCGTTCCGCCCCAGCTTTGACGCATTACGTGCGATTGAGTGCTGCGG
CGTGAATTAGATAAGCCCAGACCAGCCCGAGATGTCTGCCCTCGACAAAA
AATCTTTCACCCCGAAAACTGCATCTCCTTGAACGCGGATCGCCCTCAAA
GAACGTTAGCTCTCGCCGGACCTATCGCACGTGTCAAGAAGCCATTTAGA
GGTGGTGAGCCGAGCGGTAAGGAAGACATATTTGTTATGTGAGGGAGGGT
TGGCACCAGCTGGTGTTAACATTTGACGCATTTTTGAGCCGCGTTTCAGA
TGGAATGTGCGTAACTTTTTTATTTTTCGATACCATTTAGCCTTCTGAAC
ATGTGAAAGTCTAAACTAGGCAGCATGATTTTAGATTGTAGATGCGGACT
TCCGATGACCCACCCTCACTTCGCGATCATGGTTTACGTTTCACACCTGC
TCTTACCAATCTCGGTTCGATCCGATGTTACCTTTGTCGGCGTGAAGGGC
AATATTGACATATACTGAGCTCAGAATCAGACGTTGACTTCTTGGGAAGA
GTTCGAGCTCTCATCCAGAGGTTGGTGGAAACATCTGCGTAATCTGGAAG
AGTCGAGTTTTCAAATTTTGGCGTTGGGGCAAAGTTTGACAATATGGAAC
CGCATTTGACAAGAATGGTGTACCACGCGGATCTTGGCACTGAATTGGTC
CAGACACTGCTTTTGTGGTCAATCTGATTCCATCTTGCCACTACTTGCCT
AGACGTCAAAATCCAAAATTTGTCTCGTCCACATCAGGCAGCTGCTTCAC
GGACATGTGGATGAGAGCTCGAACCCTTCTCAAGAAGTCGACATCTGGTT
CTGAGCTCATTGCATGTTAAAATTGCCCTAAACGCCCAGATAGGCACGGA
TCGAACCAAGCCTAGTTGACCATAAAGCACCGATGTCAGGTTTGTGTTTT
TATCCCCGCGATTGTAAAGCTGCATAAAGCGCTCCCTTTTTTTTTAATCC
CGTGGACTTTCTTAGATCCAGCAGCATTCGCAATTTATAATGTTGTCAGA
TCCATGAAACTCGTGTTCATGCGAGGGTATCTTACCTACGCATCGTGTCA
ACGGTCATAGTTGTAAATGGACGAGGCCCTCGTATCCATTTAAGAGTATC
GTACTCACGCATCGTGTCTACGATCATAACTGTAAATGGACGAGGCCCGG
TGGCGAACATCAGCAGCATGTCTACCAAAATCAGGAAGAAGGGAGTCAGG
GCGGGAGTTTGAAGTGTTGTTCTTTTACATGAGAATCCTTCGGAAGCCCT
TTACCTTTTCACCTGGGAAGACCGCCATGCTGTATTCTTAATTTCCTGAT
CTCTTCGGCATTTATGAGCATGCGCTGGTGTTTCACCAACAGTTTCGGTC
GAAACCGCACGATGCGTACGGCGGGTTTTATCCACTCTGTTACTGTCATA
TTTCCGATGCAAGTGTTCATTCGCATTTTCCATTGACCTTGAATCCCGCA
CCCAAACCATATGTTGGGAAGGTAATTGATGGCTACTGTGAAATTGTTTC
AAGGATCGATCTGCGCAAATTGAATTCTGGGTACCTAGGCCCTCTCCCCC
CTTCCGCGCGCTGCCCTTTTTCGATGGGCGTCTTTATCGAAGGAGCGAAG
TGGGTTCCGCTGACGATACCTCTCCCCTCTACCAGGTAATCCCATCCATG
CGCCCCTCCATGAAATGTAGATATGAATGGCTTGCTAATCCCCCCTCCCT
CCCCACGGAACCGATTTTTTTTCGATTGTGGGGCCCCGATATGTGAGCAT
CAAAAGCCGATCGGGACTGGTTTTGAATGATCCGGAGACATGAGAAAAAT
AAATGCCTCTTGATATACAGACATTGATCCCGAGTACAGAACAATAAATT
TATAAAAAAAGCAGTCAACGAAAGTCCTCAAACTTCTCTTACTTTCCCCT
CTCAACATTGATCGGGTGATCGGATGTTGCGGCAGCATTCCACTTCAATA
GCAGGCGAATACTGGGGAATAGAATACTATCAATACGGCACTCTAGCAAG
TGGCACGGAGCCCCGGTTGCTCGAGACCAATCGTAAAGCTTTGAAACGGT
GCGAAAATGCAGTGCGCGCAGCACAGCAATTGTGGAGGATCAGATCTAGA
CCCTACATTACTTGTTCTATAGGCAAGGCGGTCGTGCATTAAATCAAGTG
CACCGTAGCACTGCTTGCCGAGCAGCATCCGCGGCAAGTCTGCAGTACAC
GACAGGTCTACACTATCGTGCATTTTATTATGGCGAGGATTGTGAGCAGT
GCTGAAGGCTGTTTACTGCTACAATATGGCCAGTGGTGCGCAGCTGAGCT
TTGTCAATCGTAGCGTACATTACAAGCACATCAAAAAGACATCGCGTTTG
CATGCACCATGCTGCACCATCTGCTTCGACCCGTGCAAGATAAACAGAAA
GTCTTCTTGCGAAACCTTACTTGCTTTCACGAGCAACACTCAACTCAAAT
CGCCGGATTGCTTGCACTTCTCGGAACATGACCATGTGTAACACGTATCA
TATGTCCGAATATCTACGGAACGAGCCGTGGTTGAGCAACGCGAAAGAGT
GTTTTTTTTTTGCCATGTTTTATCGCAGGCGTTTCGGCGGTGGTCTGTGA
CGCGTTGGACCTCAAGGGCGTCGAGGCAGTTCTAGACGGCTGCGACGCTG
CGATCACCACCCTCGGGGGGGCCCCAGAGGGTGACGAGACAAAGCGAGTA
GACTACGTTGGGAACAGAAATGTCATCGAGTCCGCAGGCATTCTCGGAAT
TACTCGGGTTATCATGGTGACGAGCGTCGGATGCGGCAGCAGCCGTGAGG
CTGTCAGTGACCAAGTTTACCAGGTAAGCTGTGTTCCCCTGGGGCCAGGA
AATCTCATCAGAACGTCCGTCGTGGTTGTTTTGCTTTCTGAAAAGTACGG
CGGAAGAGAGGAGACCTCTGCTCGGGAGGGTGATTAGTTCTTCCATAATG
GATTTGGTACATAATCTTGACCCATCTTTTTTGTCATCACATTTATTTCC
AGAGTTCGAAGGACGCCTTGCCACCTGGGGCACCTGTCTGAACATCTCAA
CTGTGGTGCAGAAGGTTCCTCTCCCTGAGGCCCCTACTTCCTTCCTCCTG
CGGTGCTGTCTGATAGTTTTTACTGTGAAAAGAGTTTCAGCCACCCCGTC
CCCACTGTGTACACACGCACAAGGTGCTTATCCACCGGCGAGAACGCAAG
TGAGAATAAACTCCATTTGTGAGAAAAAGTCGCTCACACTGGGATTCGAA
TTCGCCTGCTAGAAGGTTACGGGGATACCAACTAGACCATCGGGGCGACC
GGTCGAAGCACCGCAAATCCTCCGACGCAATGCCCAACTTTTCCCACGCC
TCAGGTCCTGGAAAAGGCGTTGAAGGCGAAAACCTTGGCGGAGAATATGC
TGCTGAAGTATTACACCAACTCCGAGTGGACCATCATACGCCCTGGGGGA
CTCAAGAGCGACGCTGCAACTGGAACAGCTATTCTAACAGAAAGCACGAA
GGCGGCAGGGGTTATCAACAGGGCAGATGTGGCCGATTTGGCCGTTAAAG
CCTTGAATTCTCCGAGCACGGTTAGAAAAATTCTGACAGCTGTGGATCCC
GATATCGAAAGCTCTTATAGTAGCACCGAGAACTTCGAGGCGTTCGCTTT
TTAA
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Coding sequence (CDS) from alignment at P-fluviatile_contig6:2593530..2598283+

>mRNA_P-fluviatile_contig6.12588.1 ID=mRNA_P-fluviatile_contig6.12588.1|Name=mRNA_P-fluviatile_contig6.12588.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1650bp|location=Sequence derived from alignment at P-fluviatile_contig6:2593530..2598283+ (Porterinema fluviatile SAG_2381)
ATGGCTCTCCCCCACAGCCTCTTCCTCGCGCTCTTGCGTGTGGGGTTGAC
AACCGCATTTGTGGCTCCTTGCATGAGATGGCTCTCCCCCACAGCCTCTT
CCTCGCGCTCTTGCGTGTGGGGTTGACAACCGCATTTGTGGCTCCTTGCA
TGAGGCGATCCTTTGTCGGAACCGCGCGCGGTATCCATTCCGGTGCCCGG
GGAACTGGTTTGGAAATGGCGTACGGGAAGGTTTTCGTCGCCGGCGGTGC
CACGGGGGTAGGAAGGGCTGTGATCGACAAGCTGTTGGAAGGGGGATCGG
AAGTCGTGGCTCTGGTCCGGAGGGGAGACGCCAAGGCCGAATTGGATGCA
ATAGACGGCGATCCTTTGTCGGAACCGCGCGCGGTATCCATTCCGGTGCC
CGGGGAACTGGTTTGGAAATGGCGTACGGGAAGGTTTTCGTCGCCGGCGG
TGCCACGGGGGTAGGAAGGGCTGTGATCGACAAGCTGTTGGAAGGGGGAT
CGGAAGTCGTGGCTCTGGTCCGGAGGGGAGACGCCAAGGCCGAATTGGAT
GCAATAGACGGCGTTTCGGCGGTGGTCTGTGACGCGTTGGACCTCAAGGG
CGTCGAGGCAGTTCTAGACGGCTGCGACGCTGCGATCACCACCCTCGGGG
GGGCCCCAGAGGGTGACGAGACAAAGCGAGTAGACTACGTTGGGAACAGA
AATGTCATCGAGTCCGCAGGCATTCTCGGAATTACTCGGGTTATCATGGT
GACGAGCGTCGGATGCGGCAGCAGCCGTGAGGCTGTCAGTGACCAAGTTT
ACCAGGCGTTTCGGCGGTGGTCTGTGACGCGTTGGACCTCAAGGGCGTCG
AGGCAGTTCTAGACGGCTGCGACGCTGCGATCACCACCCTCGGGGGGGCC
CCAGAGGGTGACGAGACAAAGCGAGTAGACTACGTTGGGAACAGAAATGT
CATCGAGTCCGCAGGCATTCTCGGAATTACTCGGGTTATCATGGTGACGA
GCGTCGGATGCGGCAGCAGCCGTGAGGCTGTCAGTGACCAAGTTTACCAG
GTCCTGGAAAAGGCGTTGAAGGCGAAAACCTTGGCGGAGAATATGCTGCT
GAAGTATTACACCAACTCCGAGTGGACCATCATACGCCCTGGGGGACTCA
AGAGCGACGCTGCAACTGGAACAGCTATTCTAACAGAAAGCACGAAGGCG
GCAGGGGTTATCAACAGGGCAGATGTGGCCGATTTGGCCGTTAAAGCCTT
GAATTCTCCGAGCACGGTTAGAAAAATTCTGACAGCTGTGGATCCCGATA
TCGAAAGCTCTTATAGTAGCACCGAGAACTTCGAGGCGTTCGCTTTTTAA
GTCCTGGAAAAGGCGTTGAAGGCGAAAACCTTGGCGGAGAATATGCTGCT
GAAGTATTACACCAACTCCGAGTGGACCATCATACGCCCTGGGGGACTCA
AGAGCGACGCTGCAACTGGAACAGCTATTCTAACAGAAAGCACGAAGGCG
GCAGGGGTTATCAACAGGGCAGATGTGGCCGATTTGGCCGTTAAAGCCTT
GAATTCTCCGAGCACGGTTAGAAAAATTCTGACAGCTGTGGATCCCGATA
TCGAAAGCTCTTATAGTAGCACCGAGAACTTCGAGGCGTTCGCTTTTTAA
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