mRNA_P-fluviatile_contig6.12510.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig6.12510.1 vs. uniprot
Match: A0A6H5JUI6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUI6_9PHAE) HSP 1 Score: 248 bits (632), Expect = 4.770e-76 Identity = 133/242 (54.96%), Postives = 163/242 (67.36%), Query Frame = 3
Query: 423 VLEDEALSPEDTTFVRSATGSLLYLSRCARPDITHAVMILTRSVATPGPRARNKLKRVLRYRKGTTSVGICYSADAEQGDVLTASVDSDFAGDGNKGYSTTRVVLFLAGGPVEWNTPKQSLVATPSLESEFVALSKACQIIKHFRHLMDTIHETQHGATVVWEDNV----------LVP*N*RVASASRRKRNSST*SSTKLCPL*PMGL*TCNTFRHRSRDILTKALKPSDFIRVRRMLLG 1118
VLEDE LS EDTT+ RSATGSLLYLSRC RPDITH+V++LTRS+ PGPRA KLKRVLRY KGT S+G+ Y DA+ G+V+TA VDSDFAGD +KGYSTT VVL+ AGG VEW + KQ++VAT S+E+EFVALSK C IIK+FRHL+DTI++T ATVVWEDN + P + R+ T + + + + DI TK L PS+F+R MLLG
Sbjct: 46 VLEDEVLSAEDTTYFRSATGSLLYLSRCTRPDITHSVIVLTRSMVKPGPRAMQKLKRVLRYLKGTISIGVRYGEDAQDGNVITAFVDSDFAGDLDKGYSTTGVVLYFAGGLVEWTSSKQTVVATSSVEAEFVALSKGCNIIKYFRHLLDTINQTHEEATVVWEDNSGALKLTRSFRITPRTKHIDVKFHHVRSLVTDGVVDVKQI---------STSLQKADIFTKGLNPSEFLRASGMLLG 278
BLAST of mRNA_P-fluviatile_contig6.12510.1 vs. uniprot
Match: A0A6H5K4G1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4G1_9PHAE) HSP 1 Score: 254 bits (649), Expect = 1.380e-72 Identity = 136/235 (57.87%), Postives = 171/235 (72.77%), Query Frame = 3
Query: 423 VLEDEALSPEDTTFVRSATGSLLYLSRCARPDITHAVMILTRSVATPGPRARNKLKRVLRYRKGTTSVGICYSADAEQGDVLTASVDSDFAGDGNKGYSTTRVVLFLAGGPVEWNTPKQSLVATPSLESEFVALSKACQIIKHFRHLMDTIHETQHGATVVWEDN---VLVP*N*RVASASRRKRNSST*SSTKLCPL*PMGL*TCNTFRHRSRDILTKALKPSDFIRVRRMLLG 1118
VLEDE LS EDTT+ RSATGSLL+LSRC RPDITH+VM+LTRS+A PGPRA KLKRVLRY KGT S+G+ Y DAE G+V+TA DSDFAGD +KGYSTT VVL+ AGGPVEW + KQ+++AT S+E+EFVALSK C IIK+FRHL+DTI++TQ ATVVWEDN + +P + R+ ++ + L + + +T ++ DI TK L PS+F+R R M LG
Sbjct: 644 VLEDEVLSAEDTTYFRSATGSLLHLSRCTRPDITHSVMVLTRSMAKPGPRAMQKLKRVLRYLKGTISIGVRYGEDAEDGNVITAFADSDFAGDLDKGYSTTGVVLYFAGGPVEWTSSKQTVMATSSVEAEFVALSKECNIIKYFRHLLDTINQTQEEATVVWEDNSGALKLPRSFRITPRTKHI-DVKLHHVRSLVADGVVDVKKISTSLQKA-DIFTKGLNPSEFLRARGMPLG 876
BLAST of mRNA_P-fluviatile_contig6.12510.1 vs. uniprot
Match: A0A6H5L217_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L217_9PHAE) HSP 1 Score: 250 bits (638), Expect = 2.690e-71 Identity = 135/242 (55.79%), Postives = 164/242 (67.77%), Query Frame = 3
Query: 423 VLEDEALSPEDTTFVRSATGSLLYLSRCARPDITHAVMILTRSVATPGPRARNKLKRVLRYRKGTTSVGICYSADAEQGDVLTASVDSDFAGDGNKGYSTTRVVLFLAGGPVEWNTPKQSLVATPSLESEFVALSKACQIIKHFRHLMDTIHETQHGATVVWEDNV----------LVP*N*RVASASRRKRNSST*SSTKLCPL*PMGL*TCNTFRHRSRDILTKALKPSDFIRVRRMLLG 1118
VLEDE LS EDTT+ RSATGSLLYLSRC RPDITH++M+LTRS+A PGPRA KLK VL Y KGT S+G+ DAE G+V+TA VDSDFAGD +KGYSTT VVL+ AGGPVEW + KQ++VAT S+E+EFVALSK C IIK+FRHL+DTI++TQ ATVVWEDN + P + R+ T + + + + DI TK L PS+F+R R MLLG
Sbjct: 598 VLEDEVLSAEDTTYFRSATGSLLYLSRCTRPDITHSMMVLTRSIAKPGPRAMQKLKGVLMYLKGTISIGVRNGEDAEDGNVITAFVDSDFAGDLDKGYSTTGVVLYFAGGPVEWTSSKQTVVATSSVEAEFVALSKGCNIIKYFRHLLDTINQTQEEATVVWEDNSGALKLTRSFRITPRTKHIDVKFHHVRSLVTDGVVDVKQI---------STSLQKADIFTKWLNPSEFLRARGMLLG 830
BLAST of mRNA_P-fluviatile_contig6.12510.1 vs. uniprot
Match: A0A6H5KNI7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI7_9PHAE) HSP 1 Score: 244 bits (624), Expect = 4.540e-70 Identity = 119/165 (72.12%), Postives = 140/165 (84.85%), Query Frame = 3
Query: 423 VLEDEALSPEDTTFVRSATGSLLYLSRCARPDITHAVMILTRSVATPGPRARNKLKRVLRYRKGTTSVGICYSADAEQGDVLTASVDSDFAGDGNKGYSTTRVVLFLAGGPVEWNTPKQSLVATPSLESEFVALSKACQIIKHFRHLMDTIHETQHGATVVWEDN 917
VLEDE LS EDTT+ RSATGSLLYLSRC RPDITH+VM+LTR +A PGPRA KLKRVLRY KGT S+G+ + DAE G+V+TA VDSDFAGD +KGYSTT VVL+ AGGPVEW + KQ++VAT S+E+EFVALSK C IIK+FRHL+DTI++TQ ATVVW+DN
Sbjct: 550 VLEDEVLSAEDTTYFRSATGSLLYLSRCTRPDITHSVMVLTRCMAKPGPRAMQKLKRVLRYLKGTISIGVRHGEDAEDGNVITAFVDSDFAGDLDKGYSTTGVVLYFAGGPVEWTSSKQTVVATSSVEAEFVALSKGCNIIKYFRHLLDTINQTQEEATVVWKDN 714
BLAST of mRNA_P-fluviatile_contig6.12510.1 vs. uniprot
Match: A0A6H5KGS0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGS0_9PHAE) HSP 1 Score: 234 bits (597), Expect = 1.130e-67 Identity = 115/165 (69.70%), Postives = 136/165 (82.42%), Query Frame = 3
Query: 423 VLEDEALSPEDTTFVRSATGSLLYLSRCARPDITHAVMILTRSVATPGPRARNKLKRVLRYRKGTTSVGICYSADAEQGDVLTASVDSDFAGDGNKGYSTTRVVLFLAGGPVEWNTPKQSLVATPSLESEFVALSKACQIIKHFRHLMDTIHETQHGATVVWEDN 917
VLEDE LS E+T + RSAT SLLYL RC +PDITH+VM+LTRS A PGPRA KLKRVLRY KGT +G+ Y DAE G+V+TA VDSDFAGD +KGYSTT VVL+ AGGPVEW + KQ++VAT S+E++FVALSK C IIK+FRHL+DTI++TQ ATVVWEDN
Sbjct: 379 VLEDEVLSAENTAYFRSATCSLLYLRRCTKPDITHSVMVLTRSTAKPGPRAMQKLKRVLRYLKGTILIGVRYGKDAEDGNVITAFVDSDFAGDLDKGYSTTGVVLYFAGGPVEWTSSKQTVVATSSVEAKFVALSKGCIIIKYFRHLLDTINQTQEEATVVWEDN 543
BLAST of mRNA_P-fluviatile_contig6.12510.1 vs. uniprot
Match: A0A6H5K4R6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4R6_9PHAE) HSP 1 Score: 238 bits (606), Expect = 2.000e-66 Identity = 131/232 (56.47%), Postives = 157/232 (67.67%), Query Frame = 3
Query: 423 VLEDEALSPEDTTFVRSATGSLLYLSRCARPDITHAVMILTRSVATPGPRARNKLKRVLRYRKGTTSVGICYSADAEQGDVLTASVDSDFAGDGNKGYSTTRVVLFLAGGPVEWNTPKQSLVATPSLESEFVALSKACQIIKHFRHLMDTIHETQHGATVVWEDNVLVP*N*RVASASRRKRNSST*SSTKLCPL*PMGL*TCNTFRHRSRDILTKALKPSDFIRVRRMLLG 1118
VLEDE LS EDTT+ RSATGSLLYLSRC RPDITH+VM+LTRS+A PGPRA KLKRVLRY KG S+G+ Y DAE G+V+TA VDSDFAGD +KGYSTT VVL+ AG PVEW + KQ++V T S+E+EFVALSK IIK+FRHL+DTI++TQ A++V + V V + S S +K DI TK L PS+F+R R MLLG
Sbjct: 691 VLEDEVLSAEDTTYFRSATGSLLYLSRCTRPDITHSVMVLTRSMAKPGPRAMQKLKRVLRYLKGAISIGVRYGEDAEDGNVITAFVDSDFAGDLDKGYSTTGVVLYFAGEPVEWTSSKQTVVVTSSVEAEFVALSKGSSIIKYFRHLLDTINQTQEEASLVADGVVDV----KQISTSLQKV-----------------------------DIFTKGLNPSEFLRARGMLLG 889
BLAST of mRNA_P-fluviatile_contig6.12510.1 vs. uniprot
Match: A0A6H5JV83_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV83_9PHAE) HSP 1 Score: 230 bits (587), Expect = 7.390e-64 Identity = 114/160 (71.25%), Postives = 134/160 (83.75%), Query Frame = 3
Query: 423 VLEDEALSPEDTTFVRSATGSLLYLSRCARPDITHAVMILTRSVATPGPRARNKLKRVLRYRKGTTSVGICYSADAEQGDVLTASVDSDFAGDGNKGYSTTRVVLFLAGGPVEWNTPKQSLVATPSLESEFVALSKACQIIKHFRHLMDTIHETQHGATV 902
VLEDE LS EDTT+ RSATGSLLYLSRC RPDITH+V++LTRS+A PGPRA KLKRVLRY KG S+G+ Y DAE G+V+TA VDSDFAGD +KGYSTT VVL+ AGGPVEW + KQ++VAT S+E+EFVALSK C IIK+FRHL+DT ++TQ ATV
Sbjct: 634 VLEDEVLSAEDTTYFRSATGSLLYLSRCTRPDITHSVVVLTRSMAKPGPRAMQKLKRVLRYLKGAISIGVRYGEDAEDGNVITAFVDSDFAGDLDKGYSTTGVVLYFAGGPVEWTSSKQTVVATSSVEAEFVALSKGCNIIKYFRHLLDTKNQTQGEATV 793
BLAST of mRNA_P-fluviatile_contig6.12510.1 vs. uniprot
Match: A0A6H5KTJ8_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTJ8_9PHAE) HSP 1 Score: 230 bits (586), Expect = 9.460e-63 Identity = 131/242 (54.13%), Postives = 161/242 (66.53%), Query Frame = 3
Query: 423 VLEDEALSPEDTTFVRSATGSLLYLSRCARPDITHAVMILTRSVATPGPRARNKLKRVLRYRKGTTSVGICYSADAEQGDVLTASVDSDFAGDGNKGYSTTRVVLFLAGGPVEWNTPKQSLVATPSLESEFVALSKACQIIKHFRHLMDTIHETQHGATVVWEDNVLVP*N*RVASASRRKRNSST*SSTK--------LCPL*PMGL*TCN--TFRHRSRDILTKALKPSDFIRVRRMLLG 1118
VLEDE L EDTT+ RSATGSL YLSRC RPDITH+VM+L RS+A GPRA KLKRVLRY KGT S+G+ Y DAE G+V+TA VDSDFAGD +KGY TT VVL+ AGGPVE + KQ++V T S+E+EFVALSK C IIK+FR +TI++TQ ATVVWEDN + A + R+ TK + L G+ + ++ D+ TK L PS+F+R R MLLG
Sbjct: 1060 VLEDEELLAEDTTYFRSATGSLFYLSRCTRPDITHSVMVLMRSMAKSGPRAMQKLKRVLRYLKGTISIGVRYGEDAEDGNVITAFVDSDFAGDLDKGYYTTGVVLYFAGGPVERTSSKQTVVTTSSVEAEFVALSKGCNIIKYFRQ--NTINQTQEEATVVWEDN---------SGALKLTRSFRITPRTKHIDVKFYHVWSLVADGVVDVKQRSTSYQKADVFTKGLNPSEFLRARGMLLG 1290
BLAST of mRNA_P-fluviatile_contig6.12510.1 vs. uniprot
Match: A0A6H5K5L0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5L0_9PHAE) HSP 1 Score: 209 bits (532), Expect = 5.120e-57 Identity = 116/232 (50.00%), Postives = 157/232 (67.67%), Query Frame = 3
Query: 423 VLEDEALSPEDTTFVRSATGSLLYLSRCARPDITHAVMILTRSVATPGPRARNKLKRVLRYRKGTTSVGICYSADAEQGDVLTASVDSDFAGDGNKGYSTTRVVLFLAGGPVEWNTPKQSLVATPSLESEFVALSKACQIIKHFRHLMDTIHETQHGATVVWEDNVLVP*N*RVASASRRKRNSST*SSTKLCPL*PMGL*TCNTFRHRSRDILTKALKPSDFIRVRRMLLG 1118
+ E++ LSPEDT + RSATGSLLYL+R +RPDITH+VM+L +S+A PGPRA KLKRVLRY KGTTS+GI Y+ DA+ GD LTA VDSDFAGD +KGYSTT VL+LAG PV+W + KQ+++A + E+E VALSKAC I+ HFR+L+++++ + TVV+EDN + + K T K + + T ++ DILTK+ F++ R +LLG
Sbjct: 481 IEEEKVLSPEDTKYYRSATGSLLYLNRGSRPDITHSVMVLAKSMAKPGPRAMTKLKRVLRYLKGTTSIGITYTEDADGGDKLTAYVDSDFAGDQDKGYSTTGAVLYLAGAPVDWISKKQTVLAISTFETEAVALSKACTIVIHFRNLLESLNMKKEKPTVVFEDN--------TGAIAFAKGAKLTPQKKKF-----VDVKFIETDLQKA-DILTKSQGAVKFLQNRLLLLG 698
BLAST of mRNA_P-fluviatile_contig6.12510.1 vs. uniprot
Match: A0A6H5K502_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K502_9PHAE) HSP 1 Score: 206 bits (523), Expect = 1.420e-56 Identity = 121/251 (48.21%), Postives = 159/251 (63.35%), Query Frame = 3
Query: 423 VLEDEALSPEDTTFVRSATGSLLYLSRCARPDITHAVMILTRSVATPGPRARNKLKRVLRYRKGTTSVGICYSADAEQGDVLTASVDSDFAGDGNKGYSTTRVVLFLAGGPVEWNTPKQSLVATPSLESEFVALSKACQIIKHFRHLMDTIHETQHGATVVWEDNVLVP*N*RVASASRRKRNSST*SSTKLCPL*PMGL*TCNTFRH-------------------RSRDILTKALKPSDFIRVRRMLLG 1118
V+E EALSPEDTT RSATGS LYL R +RP+I H V++LTRS+A PGP+ KLKR+LRY K T+S+GI Y+ AEQG++LTA VDSDFAGDG+ STT VVLFLAGGPV+W + KQ +VA S+E+E+VA+SKAC +I H+RHL+ +I++TQ AT ++EDN A+ S N T + + G+ + H + DILTK+L F+R R +LLG
Sbjct: 332 VVEGEALSPEDTTMFRSATGSALYLCRGSRPEIAHTVLVLTRSMAKPGPKVMAKLKRLLRYLKETSSIGIAYTEHAEQGNLLTAYVDSDFAGDGDDRRSTTGVVLFLAGGPVDWRSVKQMVVALSSVEAEYVAMSKACTMIIHYRHLL-SINQTQEEATRMFEDN--------TAAISTSVNNKLTPRTKHI------GI----KYHHVRSLIEDKVVAVEYIESDAQKADILTKSLGAVKFLRNRLLLLG 563 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12510.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig6.12510.1 >prot_P-fluviatile_contig6.12510.1 ID=prot_P-fluviatile_contig6.12510.1|Name=mRNA_P-fluviatile_contig6.12510.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=221bp MALHVTHAEDATQAGEEVSRLPRAFNSVQAATRARRQPPHRKDASWRIAMback to top mRNA from alignment at P-fluviatile_contig6:1922657..1923993+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig6.12510.1 ID=mRNA_P-fluviatile_contig6.12510.1|Name=mRNA_P-fluviatile_contig6.12510.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=1337bp|location=Sequence derived from alignment at P-fluviatile_contig6:1922657..1923993+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig6:1922657..1923993+ >mRNA_P-fluviatile_contig6.12510.1 ID=mRNA_P-fluviatile_contig6.12510.1|Name=mRNA_P-fluviatile_contig6.12510.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1326bp|location=Sequence derived from alignment at P-fluviatile_contig6:1922657..1923993+ (Porterinema fluviatile SAG_2381)back to top |