mRNA_P-fluviatile_contig6.12509.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig6.12509.1
Unique NamemRNA_P-fluviatile_contig6.12509.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig6.12509.1 vs. uniprot
Match: A0A6H5KZ48_9PHAE (LMWPc domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZ48_9PHAE)

HSP 1 Score: 372 bits (956), Expect = 4.240e-123
Identity = 200/294 (68.03%), Postives = 223/294 (75.85%), Query Frame = 1 
Query:   85 RAFVASSLILAQLASRCNAFVVAGIDAAASGLSAVNTGATAGAVRRDANFASLQLWWRAQAVGRGGGHARRWKSAAIARFRCPLRPSS--PMEMMAGECVGGDDISRVLFVCKYNIITSPCAEGCLNKKILDEFGVFEEGEETWEVDSCCTGGGSPNWYKKGGVTFYEGQEPDVRVEITAAQRKITTRGLHLKSGGGVRPLTPADLDKFDVILGIDDDNVEAIMTAAKHWGKGDLAAKKTRSLLSYCTEFKDVKTIPNPYYAGRNGFEHLVDVIQHAVDNLFEKSLRGEALSYD 960
            +A VAS+L+LA+    C AFV  G+ + +  LS     +T  AV      A   +     A    G  ARR   AA    RC    SS  P+ MMAGECVGG DISRVLFVC YNI+TSPCAEGCLNKKILDEFGVFEEGEETWEVDSC TGGG  +WYK+GG   + GQEPD R+E+TAAQR+ITTRGL +K GGG RPLTPADLDKFDVILGIDDDNVEAIMTAAKHWGKGD+AAKKTRSLLSY T++ +VKTIPNPYYAGR GFE LVD+IQHAVDNLFEK LRGEALSYD
Sbjct:    3 KALVASALVLARWTPFCTAFVAPGMGSNSLLLSTPVVSSTTSAV----GVAPASIGHSNWAAAMAGSDARRRGRAA----RCWRSSSSWKPLRMMAGECVGGTDISRVLFVCLYNIMTSPCAEGCLNKKILDEFGVFEEGEETWEVDSCGTGGGPADWYKEGGEALFRGQEPDPRIEVTAAQRRITTRGLDMK-GGGSRPLTPADLDKFDVILGIDDDNVEAIMTAAKHWGKGDIAAKKTRSLLSYGTKYPEVKTIPNPYYAGREGFEVLVDIIQHAVDNLFEKCLRGEALSYD 287
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BLAST of mRNA_P-fluviatile_contig6.12509.1 vs. uniprot
Match: A0A7S2XZB6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZB6_9STRA)

HSP 1 Score: 147 bits (372), Expect = 2.380e-37
Identity = 75/178 (42.13%), Postives = 110/178 (61.80%), Query Frame = 1 
Query:  394 SRVLFVCKYNIITSPCAEGCLNKKILDEFGVFEEGEETWEVDSCCTGGGSPNWYKKGGVTFYEGQEPDVRVEITAAQRKITTRGLHLKSGGGVRPLTPADLDKFDVILGIDDDNVEAIMTAAKHWGKGDLAAKKTRSLLSYCTEFKDVKTIPNPYYAGRNGFEHLVDVIQHAVDNLFE 927
            ++V+FVC  NI  SP AE   +KK+ D        ++ + ++SC TGGGS +WY + G +++EG+ PD R+   A+ R IT  G         RPLTP DLD FD I+ +D  N +AI  AA +WGK   AA+KT+ + SYC +F D+K++P+PYY G  GFE ++D+++ A   L E
Sbjct:   60 TKVIFVCLGNICRSPTAEAVFDKKVQDA-----GRQDQFFIESCGTGGGSADWYMQSGFSYHEGESPDRRMTAAASNRGITLCGAS-------RPLTPEDLDIFDYIIAMDGSNKQAITEAASYWGKSAQAAQKTKMMTSYCKKF-DMKSVPDPYYGGAQGFETVLDILEDACTGLLE 224
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BLAST of mRNA_P-fluviatile_contig6.12509.1 vs. uniprot
Match: A0A835ZBG2_9STRA (Phosphotyrosine protein phosphatase I superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG2_9STRA)

HSP 1 Score: 141 bits (355), Expect = 2.750e-35
Identity = 78/194 (40.21%), Postives = 114/194 (58.76%), Query Frame = 1 
Query:  346 SPMEMMAGECVGGDDISRVLFVCKYNIITSPCAEGCLNKKILDEFGVFEEGE--ETWEVDSCCTGGGSPNWYKKGGVTFYEGQEPDVRVEITAAQRKITTRGLHLKSGGGVRPLTPADLDKFDVILGIDDDNVEAIMTAAKHWGKGDLAAKKTRSLLSYCTEFKDVKTIPNPYYAGRNGFEHLVDVIQHAVDNL 921
            +P+   A   +      +VLFVC  NI  SP AE            V E+ E  + + +DSC TGGG   WY+ GG +++EG   D R+   AAQR     G+HL S    RP+ P+DLD+FD+I+G+D  N +A++ AA +WGK +LA  K R++ SYCT+ K   T+P+PYY G  GFE ++D+++ A + L
Sbjct:   17 APIYSFAVPTMSQQATKKVLFVCLGNICRSPSAEAVFRS-------VVEKAEKADNFVIDSCGTGGGMRGWYRDGGRSYHEGDPADARMTEAAAQR-----GVHLTSIS--RPMRPSDLDEFDLIIGMDGANKQAVIEAAHYWGKKELAEAKLRNMTSYCTKHKSA-TVPDPYYGGPEGFEKVLDLLEDACEGL 195
[Close]
BLAST of mRNA_P-fluviatile_contig6.12509.1 vs. uniprot
Match: A0A0G4I1U9_9ALVE (LMWPc domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I1U9_9ALVE)

HSP 1 Score: 133 bits (334), Expect = 4.650e-32
Identity = 71/182 (39.01%), Postives = 107/182 (58.79%), Query Frame = 1 
Query:  397 RVLFVCKYNIITSPCAEGCLN-----KKILDEFGVFEEGEETWEVDSCCTGGGSPNWYKKGGVTFYEGQEPDVRVEITAAQRKITTRGLHLKSGGGVRPLTPADLDKFDVILGIDDDNVEAIMTAAKHWGKGDLAAKKTRSLLSYCTEFKDVKTIPNPYYAGRNGFEHLVDVIQHAVDNLFE 927
            +VLFVC  NI  SPCAEG        KK+ D+F           +DSC  GGGS +WYK+GG +++EG+  D R+ + A +R I+   +        RPL P+D+++FD ++ +D  N E +  AA+HWGK D A KK + + S+C + K    +P+PYY G  GF+ ++D+++ A D L E
Sbjct:   58 KVLFVCLGNICRSPCAEGVFKSLVKGKKLQDKF----------VIDSCGLGGGSDDWYKRGGFSYHEGEAADQRMAMAADKRGISVVSVS-------RPLKPSDIEEFDDLVIMDSSNRERLEEAAEHWGKLDSAKKKVKLMTSFCRKHK-ADFVPDPYYGGAKGFDVVLDLLEDACDGLLE 221
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BLAST of mRNA_P-fluviatile_contig6.12509.1 vs. uniprot
Match: A0A835XEG1_9CHLO (LMWPc domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835XEG1_9CHLO)

HSP 1 Score: 130 bits (328), Expect = 1.670e-31
Identity = 76/202 (37.62%), Postives = 117/202 (57.92%), Query Frame = 1 
Query:  340 PSSPMEMMAGECVGGDDISRVLFVCKYNIITSPCAEGCLNKKILDEFGVFEEGEETWEVDSCCTGGGSPNWYKKGGVTFYEGQEPDVRVEITAAQRKITTRGLHLKSGGGVRPLTPADLDKFDVILGIDDDNVEAIMTAAKHW-----GKGDLA---AKKTRSLLSYCTEFKDVKTIPNPYYAGRNGFEHLVDVIQHAVDNL 921
            PSS  +   G   G   I  VLFVC  NI  SP AE    + ++ + G+    E ++++DSC TGGGSP+W+ +GG +++EG   D R+ +TA +R     G+ L S    RPL P DL +FD ++G+D +N++AI TAA +W     G G +    A++   +  YC +FK    +P+PYY G  GFE ++D+++ A + L
Sbjct:    5 PSSSPQPAGGAEAGARKIG-VLFVCLGNICRSPTAEAMF-RSVVQKAGL----EASFDIDSCGTGGGSPDWFTEGGWSYHEGDTADSRMTVTARKR-----GVILTSRS--RPLQPLDLSRFDYVIGMDPNNLKAIRTAADYWLVRPMGAGKVPTDYARRVSLMTQYCAKFKGQPEVPDPYYGGPAGFERVLDLLEDACEGL 193
[Close]
BLAST of mRNA_P-fluviatile_contig6.12509.1 vs. uniprot
Match: A0A7S3A8J4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8J4_9RHOD)

HSP 1 Score: 132 bits (331), Expect = 1.950e-31
Identity = 77/180 (42.78%), Postives = 109/180 (60.56%), Query Frame = 1 
Query:  394 SRVLFVCKYNIITSPCAEGCLNKKILDEFGVFEEGEETWEVDSCCTGGGSPNWYKKGGVTFYEGQEPDVRVEITAAQRKITTRGLHLKSGGGVRPLTPADLDKFDVILGIDDDNVEAIMTAAKHWGKG--DLAAKKTRSLLSYCTEFKDVKTIPNPYYAGRNGFEHLVDVIQHAVDNLFE 927
            S VLFVC  NI  SP AE    K +++  G       T+E+DSC TGGG+P+W+ +GG +++EG   D R+  TAA+R     G+ L S    RPL   DL+KFD I+G+D  N + IM AA++WG    DLA +KT  +L Y +  K  K +P+PYY G +GFE ++D++  A D L +
Sbjct:   67 SSVLFVCLGNICRSPTAEAMF-KTVVEREGKAA----TYEIDSCGTGGGNPDWFTEGGWSYHEGDSSDSRMMQTAAKR-----GIALTSRS--RPLNKEDLEKFDRIIGMDSSNYKEIMKAAQYWGPEYLDLAKQKTSLMLDYSSNSKG-KPVPDPYYGGPDGFEKVLDLLDEACDGLLD 233
[Close]
BLAST of mRNA_P-fluviatile_contig6.12509.1 vs. uniprot
Match: A0A7S0BPS6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BPS6_9RHOD)

HSP 1 Score: 128 bits (322), Expect = 1.680e-30
Identity = 76/178 (42.70%), Postives = 106/178 (59.55%), Query Frame = 1 
Query:  394 SRVLFVCKYNIITSPCAEGCLNKKILDEFGVFEEGEETWEVDSCCTGGGSPNWYKKGGVTFYEGQEPDVRVEITAAQRKITTRGLHLKSGGGVRPLTPADLDKFDVILGIDDDNVEAIMTAAKHWGKG--DLAAKKTRSLLSYCTEFKDVKTIPNPYYAGRNGFEHLVDVIQHAVDNL 921
            S VLFVC  NI  SP AE    + +++  G        +E+DSC TGGG+P+W+ +GG +++EG   D R+  TAA R     G+ L S    RPL   DL+KFD I+G+D  N + IM AA++WG    DLA KKT  +L Y +  K  K +P+PYY G +GFE ++D++  A D L
Sbjct:   42 SSVLFVCLGNICRSPTAEAMF-RTVVERDGKAA----AYEIDSCGTGGGNPDWFTEGGWSYHEGDPSDSRMMQTAANR-----GIALTSRS--RPLNKEDLEKFDRIIGMDSSNYKEIMKAAQYWGPEYLDLAKKKTSLMLDYSSHNKG-KPVPDPYYGGPDGFEKVLDLLDEACDGL 206
[Close]
BLAST of mRNA_P-fluviatile_contig6.12509.1 vs. uniprot
Match: A0A835WI06_9CHLO (LMWPc domain-containing protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WI06_9CHLO)

HSP 1 Score: 125 bits (313), Expect = 2.760e-29
Identity = 70/182 (38.46%), Postives = 103/182 (56.59%), Query Frame = 1 
Query:  400 VLFVCKYNIITSPCAEGCLNKKILDEFGVFEEGEETWEVDSCCTGGGSPNWYKKGGVTFYEGQEPDVRVEITAAQRKITTRGLHLKSGGGVRPLTPADLDKFDVILGIDDDNVEAIMTAAKHWGKGDLAAKKTRS--------LLSYCTEFKDVKTIPNPYYAGRNGFEHLVDVIQHAVDNL 921
            VLFVC  NI  SP AE    K ++   G+ +     +++DSC TGGG+P+W+ +GG +++EG   D R+ +TA +R     G+ L S    RPL P D  +FD I+G+D  N+ AI TAA +W    + A K           + SYCT+FK    +P+PYY G  GFE ++D++  A + L
Sbjct:   35 VLFVCLGNICRSPTAEAVF-KAVVQRAGLAD----AFDIDSCGTGGGNPDWFTEGGWSYHEGDPADSRMTLTARKR-----GVLLTSRS--RPLAPLDFSRFDYIVGMDAKNIRAIRTAADYWRVRPMGADKVPEAYGQRLSLMTSYCTKFKGEPEVPDPYYGGPAGFERVLDLLDDACEGL 204
[Close]
BLAST of mRNA_P-fluviatile_contig6.12509.1 vs. uniprot
Match: A0A250X013_9CHLO (LMWPc domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X013_9CHLO)

HSP 1 Score: 126 bits (316), Expect = 4.550e-29
Identity = 71/192 (36.98%), Postives = 109/192 (56.77%), Query Frame = 1 
Query:  397 RVLFVCKYNIITSPCAEGCLNKKILDEFGVFEEGEETWEVDSCCTGGGSPNWYKKGGVTFYEGQEPDVRVEITAAQRKITTRGLHLKSGGGVRPLTPADLDKFDVILGIDDDNVEAIMTAAKHW--------GKGDLAAKKTRSLLSYCTEFKDVKTIPNPYYAGRNGFEHLVDVIQHAVDNLFEKSLRGEA 948
            RV+FVC  NI  SP AE    + +++  GV       +++DSC TGGG+P+WY +GG +++EG EPD R  +T+A +K   RG+ L S    RPLTP D+ +FD+I+G+D  N  A+  A  +W         + ++   K   +  YC  +K V  +P+PYY G  GFE ++D++  A + L +  L   A
Sbjct:   85 RVIFVCLGNICRSPTAEAVF-RAVVERRGV----SHLFDIDSCGTGGGNPDWYCRGGWSYHEGDEPDRR--MTSAAQK---RGIVLTSRS--RPLTPMDVTRFDLIIGMDAKNQYAVKEATSYWLSEGMIESSEAEVLRSKNSLMTDYCRTYKGVTEVPDPYYGGPEGFERVLDLLYDACEGLLDTLLTTHA 264
[Close]
BLAST of mRNA_P-fluviatile_contig6.12509.1 vs. uniprot
Match: A0A8J4GHR6_9CHLO (LMWPc domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4GHR6_9CHLO)

HSP 1 Score: 125 bits (315), Expect = 4.700e-29
Identity = 74/196 (37.76%), Postives = 116/196 (59.18%), Query Frame = 1 
Query:  382 GDDISRVLFVCKYNIITSPCAEGCLNKKILDEFGVFEEGEETWEVDSCCTGGGSPNWYKKGGVTFYEGQEPDVRVEITAAQRKITTRGLHLKSGGGVRPLTPADLDKFDVILGIDDDNVEAIMTAAKHW-----GKGDLAAKKTRSLL---SYCTEFKDVKTIPNPYYAGRNGFEHLVDVIQHAVDNLFEKSLRGE 945
            G+  + VLFVC  NI  SP AE    + ++++ G+       +++DSC TGGG+P+W+ +GG +++EG   D R+ +TA +R     G+ L S    RPL P DL +FD I+G+D  N+ AI TAA +W     G+G +    +R ++   SYC +F     +P+PYY G  GFE ++D+++ A + L E S+R E
Sbjct:   75 GNRKAGVLFVCLGNICRSPTAEAVF-RSVVEKAGLTA----AFDIDSCGTGGGNPDWFTEGGWSYHEGDPADSRMTMTARKR-----GVLLTSRS--RPLQPLDLSRFDYIVGMDPKNLRAIKTAADYWLVRPMGEGKVPPDYSRRVVLMTSYCRKFTGAPEVPDPYYGGAAGFERVLDLLEDACEGLLE-SIRKE 257
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12509.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KZ48_9PHAE4.240e-12368.03LMWPc domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A7S2XZB6_9STRA2.380e-3742.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A835ZBG2_9STRA2.750e-3540.21Phosphotyrosine protein phosphatase I superfamily ... [more]
A0A0G4I1U9_9ALVE4.650e-3239.01LMWPc domain-containing protein n=1 Tax=Chromera v... [more]
A0A835XEG1_9CHLO1.670e-3137.62LMWPc domain-containing protein n=1 Tax=Edaphochla... [more]
A0A7S3A8J4_9RHOD1.950e-3142.78Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BPS6_9RHOD1.680e-3042.70Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A835WI06_9CHLO2.760e-2938.46LMWPc domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A250X013_9CHLO4.550e-2936.98LMWPc domain-containing protein n=1 Tax=Chlamydomo... [more]
A0A8J4GHR6_9CHLO4.700e-2937.76LMWPc domain-containing protein n=1 Tax=Volvox ret... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:1914660..1921354 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score364.4
Seed ortholog evalue5.2e-98
Seed eggNOG ortholog2880.D7FIV5
Preferred namestp1
KEGG rclassRC00017
KEGG koko:K01104,ko:K14394
KEGG ReactionR00548,R02135
KEGG Pathwayko00730,ko00740,ko01100,map00730,map00740,map01100
GOsGO:0003674,GO:0003824,GO:0003993,GO:0004721,GO:0004725,GO:0004726,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0023052,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564
EggNOG free text desc.non-membrane spanning protein tyrosine phosphatase activity
EggNOG OGsCOG0394@1,KOG3217@2759
EC3.1.3.2,3.1.3.48
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Hectar predicted targeting categorysignal peptide
Exons7
Model size1689
Cds size909
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816993.6816518-UTR-P-fluviatile_contig6:1914659..19153851622816993.6816518-UTR-P-fluviatile_contig6:1914659..1915385Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1914660..1915385 -
1693570718.2800367-UTR-P-fluviatile_contig6:1914659..19153851693570718.2800367-UTR-P-fluviatile_contig6:1914659..1915385Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1914660..1915385 -
1622816993.7656553-UTR-P-fluviatile_contig6:1921081..19211031622816993.7656553-UTR-P-fluviatile_contig6:1921081..1921103Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1921082..1921103 -
1693570718.7393508-UTR-P-fluviatile_contig6:1921081..19211031693570718.7393508-UTR-P-fluviatile_contig6:1921081..1921103Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1921082..1921103 -
1622816993.7768826-UTR-P-fluviatile_contig6:1921322..19213541622816993.7768826-UTR-P-fluviatile_contig6:1921322..1921354Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1921323..1921354 -
1693570718.7600722-UTR-P-fluviatile_contig6:1921322..19213541693570718.7600722-UTR-P-fluviatile_contig6:1921322..1921354Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1921323..1921354 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816993.6922467-CDS-P-fluviatile_contig6:1915385..19154751622816993.6922467-CDS-P-fluviatile_contig6:1915385..1915475Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1915386..1915475 -
1693570718.5098937-CDS-P-fluviatile_contig6:1915385..19154751693570718.5098937-CDS-P-fluviatile_contig6:1915385..1915475Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1915386..1915475 -
1622816993.7026634-CDS-P-fluviatile_contig6:1916065..19162151622816993.7026634-CDS-P-fluviatile_contig6:1916065..1916215Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1916066..1916215 -
1693570718.5239701-CDS-P-fluviatile_contig6:1916065..19162151693570718.5239701-CDS-P-fluviatile_contig6:1916065..1916215Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1916066..1916215 -
1622816993.7172034-CDS-P-fluviatile_contig6:1917008..19171801622816993.7172034-CDS-P-fluviatile_contig6:1917008..1917180Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1917009..1917180 -
1693570718.6772466-CDS-P-fluviatile_contig6:1917008..19171801693570718.6772466-CDS-P-fluviatile_contig6:1917008..1917180Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1917009..1917180 -
1622816993.7267652-CDS-P-fluviatile_contig6:1918306..19184231622816993.7267652-CDS-P-fluviatile_contig6:1918306..1918423Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1918307..1918423 -
1693570718.7003999-CDS-P-fluviatile_contig6:1918306..19184231693570718.7003999-CDS-P-fluviatile_contig6:1918306..1918423Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1918307..1918423 -
1622816993.7371175-CDS-P-fluviatile_contig6:1919412..19196861622816993.7371175-CDS-P-fluviatile_contig6:1919412..1919686Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1919413..1919686 -
1693570718.715485-CDS-P-fluviatile_contig6:1919412..19196861693570718.715485-CDS-P-fluviatile_contig6:1919412..1919686Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1919413..1919686 -
1622816993.7507408-CDS-P-fluviatile_contig6:1920975..19210811622816993.7507408-CDS-P-fluviatile_contig6:1920975..1921081Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1920976..1921081 -
1693570718.7286088-CDS-P-fluviatile_contig6:1920975..19210811693570718.7286088-CDS-P-fluviatile_contig6:1920975..1921081Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1920976..1921081 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12509.1prot_P-fluviatile_contig6.12509.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig6 1915386..1921081 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig6.12509.1

>prot_P-fluviatile_contig6.12509.1 ID=prot_P-fluviatile_contig6.12509.1|Name=mRNA_P-fluviatile_contig6.12509.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=303bp
MGLTAPGAVARAFVASSLILAQLASRCNAFVVAGIDAAASGLSAVNTGAT
AGAVRRDANFASLQLWWRAQAVGRGGGHARRWKSAAIARFRCPLRPSSPM
EMMAGECVGGDDISRVLFVCKYNIITSPCAEGCLNKKILDEFGVFEEGEE
TWEVDSCCTGGGSPNWYKKGGVTFYEGQEPDVRVEITAAQRKITTRGLHL
KSGGGVRPLTPADLDKFDVILGIDDDNVEAIMTAAKHWGKGDLAAKKTRS
LLSYCTEFKDVKTIPNPYYAGRNGFEHLVDVIQHAVDNLFEKSLRGEALS
YD*
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mRNA from alignment at P-fluviatile_contig6:1914660..1921354-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig6.12509.1 ID=mRNA_P-fluviatile_contig6.12509.1|Name=mRNA_P-fluviatile_contig6.12509.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=6695bp|location=Sequence derived from alignment at P-fluviatile_contig6:1914660..1921354- (Porterinema fluviatile SAG_2381)
CTCCAAATTGCTGCGAGCGATTACACACAAAGGTGCCGGGACGGAATCAG
CAAAATGAGCCCGATGCTATTTATCCCTAAGTCCTTTTCTAGAACTAGGT
GGGAGGAAGCCGTGGACTCCTCTCTCGCGATGCAGGACCAGCCAGAATAG
AGAAGAGTAGCTAACACAACGCGTCCCACCAGACTGTTCCTCAGGGCACC
CACGGGGGTCGCGCCTTTGATTCACGATGCCTCCCCCGAGGTCGTTTTCA
GCTCGCGCAGGCCCAGTGGAGCGATGGGTCTCACAGCGCCTGGAGCAGTG
GCGAGGGCTTTCGTGGCTTCTTCGCTCATCCTTGCACAATTGGCATCCCG
CTGTAACGCCTTCGTTGTTGCTGGAATCGGTGAGACGTTGCTTTTGCGTC
TTGGTCGTGCGGTCTAGCGCGCGGGACCGGCCCAGTGTGGGTTGTTGTGT
GGGGTTATGCCGTGGCGTGTGGGCGTTTGTCAAACCAAGTGGTACTCGGC
TGCAGATCTACCGTCTTCAGCGGACCGTTGGCATATATGGATGTGGCGTG
AACTGCTGTTGGCTCAAGTCTGGCATCGCGCGTTCAAACGAGGAAACATG
AGCACTCTCTGTCCTCGCAGGCGCCGATCCCGGCGGCAGCAAACAAAACA
CGGGCAACAACAGTAGTCTACCCCTGGCAATTTGGCCGAGCTTCCTTCGT
GGTTGTTTCGGAGAATCAAAACGGGACTTGTTGATGAGGTAACTCGCTTC
TTCACCGATGAGCGGCTGCTGCAACAGCATGACGGTCGGCATCATGATTT
TGATCTACTCCGCCATCAATCTTCGGCGTCTAATAGTTCAGCAGGACAGA
CGATTTCAGGATGACACGGCGCCACGAGCGGCTCAGAGTTGACATTTTCG
CAGCGCGAAGCAAAAATTTGCTGCGGCACTGAAGAGCTGTGGATTAGAGC
CAGCCTTACTGAAATCACCACGACAATCACAGTGCCCCCGCCGACATGCA
AACCATGAGGGCAGTCGGTACGCGGTAAGCCAATGGGCGGGGGATGCGTG
AAAAGTGTTGTAAGGACGATTCCATAGAACTCACCCGTGGTTGAACCTCC
TCGGCTGCGCTATTTTTTTTCTTGGCTTCGGTGGTATGCGGTATAGCGCC
GGTCCTAGGCCGCACGCATCCTACTCGCAAAGCAGGTTGTACACGTACAT
CAAGATTGTTCGGCAGCGTGTTGGACGATCTAAACTGCTGCCGCTACGCG
GCGTAGATGCAATCCAAGGGAGAAGTTGATGTTATCCTGGCCTCTTGTGT
CGAGCGCTGAAAGGCTCGGACCATTCGAGCAGTGCATAATTCTCGCCCTA
TGAAAACAGATTTCTGCGCTGTCTGAGGTTCGAACAAGGTTCTGCTGCTG
CCTAGCACACACAAGCTCGGGTGCCGACACCAAGCAGCGCCACAGTTGGG
GCGGTTCTGCCAATGCCGGCATCAACACTCGCGTTCACATATCCCACTTT
CTTTGTTCAACGTTGAACCCTCCCCCTTGGACTGTGTCCCGTCGGCGAAA
CAATATTAAATTTGACGAGCGAGTTCCTAGCTCGGACCCTTCCTGCTCCC
CCTCCACTCCACTACCTTCAACCTGCCCTCTTGGTTCAAATCACTTGTGC
CCGCACTCCGAACCGCAGATGCGGCGGCGTCAGGCTTATCCGCCGTAAAT
ACCGGCGCCACCGCCGGCGCCGTTCGCAGGGACGCGAACTTCGCTAGCTT
GCAGCTTTGGTGGAGAGCACAGGCCGTTGGAAGGGGTGGGGGGCACGCAC
GGCGATGGAAATCGGCGGCGATAGCACGATTTCGGTGTCCCTTACGTCCG
TCGTCGCCGATGGAGATGATGGCGGGGGAGTGCGTGGGAGGGGACGACAT
CTCGAGGGTGCTGTTCGTGTGCAAGTACAACATCATTACGAGGTATGATA
GCTCGCGTTGCCCTCTATTCCGCAATGGGCGCGCTGGCAGGGGCCGATGG
GCGCTAGGATAAAGTCATGATTGCGAGGCTGTTTCGGGCGATCCGCTCCC
GTTTTTTTTTCTTTGAAGAATTGCGTTCTCTTGCGCGTTTGAGTTGGGAT
GCATGTGCTGTGATCAATCGTCGAAGCACGCAAACTGTGGCAAAAGCGAG
CACGGGACTTCCCGCGCCGTGATCATACTTCTGCTCCTGCATTGCGGCTA
CGTTGGTTGCAGCAGCAGAAGAGTAAGCTCTACTCTGAGAGCTGAGCACT
GATCTTTGAGGGTGGCCTTTGTGGTTTGGAGTATCAGGCTACTCGATTCA
GACAAGTCCCAACCGAGCAGCGTTGCTCCACTTATCTTGCCGTCGGCGTG
AACGTTCGTCTTGCTCTTATGTGTCGCTCCATACTTCGCAACTCTGCGCG
CGTTCTTATACGCAACTTGCTTCGTTGTTTGGTGAAGTGTTGTCAGCACC
TCGGACCGCAGCAGGCGTGTGCTTCATTCTTTCTGTTCCATGAGTAGCAC
GGGCTCAACAAACATTCGTCAGTGTGCTGACATGCTCCGCTGCCCACCTT
GCGGAAGCAGTCGCATGGGTTTTTGAACGAGTCTTCGTGTGTTTTTATCG
TGTTCCGTTCGGCTCGTTTTTGTATTATTATATCAGAGAATGTTTTGCCT
TCCACATGTTCTTGATAACCTTTCTGCACTCTTACTCCACGCTGTATCGT
TTGCCTTCCTCTTCCCCCTACTTTGCGGAAGGGCCTGTATTTTTTCACGG
CGCTTGCTCCCTGCCAGCCTTGACGATGTGGCTCGTGCTCTGGCAAGGGA
TGATTCAATCGGCTTTTCTCGTGGAAGTCTCACTCGGCCGGCTGGCGATT
GTCATGCATTCCCGCTGAACTGTATCTCCTTTCTTTGTCGCTTGTCCTCC
TGACGAAATGTAATAATTTCTTATCATACAGCCCGTGCGCAGAGGGATGT
CTCAACAAAAAAATACTGGACGAGTTCGGGGTGTTCGAGGAGGGTGAAGA
GACGTGGGAGGTCGACTCCTGCTGCACGGGGGGAGGCAGCCCGAACTGGT
TAGTGATCTGCGGTTGTCGTTAAATGCGAATGCAAGGGGATACCTGATTC
TTGTTTACTTAGCTTGGCTGCTGAAACAACAGGTGTCTCACATCCCGCTT
AAAGGCGTCCCCTTACTTTTCGACGAGAAGCAGGCCTTGCAATTTTTTTG
CAGTGAAGTATCCGTGTGCTGATGGTGTCGGAGTTTAATTTGCCCAAGTA
TGGGCGTATGTAAGCGCTCTCGCGTGGTTGCCGGGCGGGTTCCGGGTGTT
GTTTTTGTCATTTTTTTTATCTTACGCACGCGTGCGCGTGAATACCGCCG
AGGGTGCCTGCTAAGGCTCGCCTGCTTGTTTTGTTCTTCTTCGCGATTCC
CAGAATTCGCTCAGGCTATTCTCGTTTCTCCGCTCACTCGGTTGCGGGTT
TGCCTGTCGTGTGTGGCACTCAATGGGAGCGGCCCTGAGCTTGGTTCGCA
CAAGCGCTCAAAGCGAAACCGGCAGGTGTTCACCCACAGACAAAGTCTAA
TGGGCTCTGGCGAACTCGACACGGTTTTTCTCTGTTCCTCTGGCCCCTTA
CCTCTTGTACGCGAGAGGGTCTGTTCATCTCCAAGCGCTCTTCTGGTGAA
CAATTGCACTGGTCGTGGTGCGCGCCAGATGTTCGCCGCAAGGCCAGACG
CGGGGCAACATTTGAAAATCTACGCGTGATGGTGGCTGCTCACGCGGGGA
GGTTGTCTTCCGAGAAGTTTGCCTGCGCATCTTCTCGTCGTGAGATGTCG
ACGGCGAGGGTGCCGCTGTGATCCGCACCCTCCAGGACAGGGCTCGTTTC
TGTTCAGCTTTTCGATGCCTTTTTATGGCAGCAAGTGGTGCGAACTGCAA
AGAGCGGAGATGTGCTCATTGATGCCAACGTTTTTTTTTCTTTTTTGGTG
TGTGTGTATGTTTGTGGAAATACCTTGCATCCTCACAAAAGTTAAAGAGA
AGCGGCGCCTTACAGCAGCAGACGAGATGTGAAACGTCGGCAATGTTCCC
TCACGAGGCGGAATTTTCCTCTACAACTAAATGATTTGCTGGGTGGGTTG
AACCTCCGCCGGTGTAAACACAGCGAGAGCTCCCACCCTTCATCATATTA
TCTTCCTTCACTCCGCGCCGACAGGTACAAGAAGGGCGGGGTTACCTTCT
ACGAGGGGCAGGAGCCAGACGTTCGCGTGGAGATCACGGCGGCCCAGAGA
AAGATCACCACGAGAGGCCTTCACCTCAAGAGTGGGGGCGGGGTGCGACC
CCTCACGCCGGCCGACTTGGATAAGTTCGACGTCATCCTTGGAATTGTGA
GTCGGTGAAAGGCGTCGGAGATGAAGAGAAGAGCACGAGCGTATCCGGTT
GGTTTTCTGTCTTTGTTTTTGTATTTTACTGTAGTTTGTGTCGATCGGCA
TTTTTTTTTCCAGTGACTCGGGTCGGGTAGAGCACAGGGTTCTACGGTTG
ACCAAAATTGTTGATCGCTCTCCTTCTATGAGTTCATCGCAGCATGCGCC
ATGTGATGTTTCCTTGGGTCTGATTTGCAACCCTCAGGAACGTGCAACTC
CACACTGTTGTGAAAAATGTTTGGCCTACCGCATCTGCAACCCTGTTGGC
CGCGCTCACGCTATGTGCCAAACACAGCACACCCAGCCTCTTGGAGCAGT
CGGTGCGCATTCCTTGATCGGGGCCAGACAGCAAACGCGTTGATGTGCAC
AAATAAATACACGCGAGGTGTCATCCCCCTACACATCCCTGGCTGCGATC
ACTAGTTGTAGCTCCGACACGTGAGCCCTGTCGTCGCGGAATCAATGCGT
CAAGGAAAAACACGTCCAAGCAAGGGGTCACGTTGCTTGGACGACCACGA
GGGAGAGGCCGTGCCATTACCTCCAAACCTTTGTCTCTCCATCACAACCA
CCGCCACCGCCACCGAACGCCATACGTTGACCGTGCTCTCTCCGTCACTC
CTCCCTCCCTCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCTCCT
TCCCCCCTTTCTGTCTCAACGCCTGACAAAATCTCGCCGCCGCTCGCATT
TCCTCCAACGATGCCATGTATCCATCCATCCACGCCAAGGACGACGACAA
TGTCGAGGCGATCATGACCGCCGCGAAGCACTGGGGCAAGGGCGACTTGG
CCGCAAAGAAGACCAGATCGTTGCTCTCTTACTGCACGGAGTTCAAGGAC
GTCAAAACCATCCCGAACCCCTACTACGCCGGGCGGAACGTGAGTGGCGG
TGGTGCACTCCCACGGCCAAAGGTGGCGGTGGATCCGCCAACCGGTATTT
TCAAAGGGAAAACGGAATTTTTTGTTGTTTTTACGTCTTGTCTTCTTACA
TTGTGGAGGGTAGTCGTGCCTGCTCATCTTCTCGTTTTCGTCTTTCACGA
GAGAACGGGTCGGCAGGGTTCCAACTTCTGTTCCTCCCAAGCTTCTTGCC
CTCGGAAGCGTTGTGCGTTTCCTCTTGATTTCGATGTGCACAACGAAACG
CCTGATGTGCTTGATTCTACAAAGGCCTTGTCGAGTGGCCAAGATGTAAA
TCTTTCCCGGAAGATCACGCTCCGATGGCCCTTCGCCGTGCATGATTCCC
TTCGAGCCAGTGAGCAGTCTGGCGAGATGGCGCTTTTTTTCCTCCTCGCG
CCCGATCGTGCTAGTCGAACAGGACGGCAACGTGCAAGTGAAAGCGGCTC
TAATGAGCTGGTTGGCCGGATGGCGCTCCCGCTTGTCCAATCCTCAAGTC
TGCACCCACTTTATGCCGTAGCAGGTTTTGATGCGCCGATTGTCTGCTTC
GCCTCGACCAATAATCCGATGCCGCGCAGGGCTTCGAGCACCTGGTGGAC
GTGATCCAGCACGCCGTCGACAACTTGTTCGAGAAGTCCCTCAGAGGGGA
AGCTCTCTCGTACGACTGACCCAATCTACTGCTATGGGGCGGTGTTGTGT
GGCGTTCATCTACTTGTGGGAAATGTGGGGCTGGAGTGCATGGTCTCCTT
CCACGGTGTGTGTTTGGAAACACGGCGATGGCTTCGAAAAAATATGCCGC
CGTTTTCATTCACTGCATCAAACTTGCCTCTGGGTGGTCTCCATTTCGTT
TTTGCGAAACCCGTGCATGTGCTGGAAAAGGCCGGCATATTAATGACAAT
GATCTCGCCACTCTATTGCGATGCTCGCGACCAACCGGCAATGTTGATCA
TTTGATGCCGTGGCTGTTGGCAACACGAGGATCTCGGCCTGACGGGGCCG
GCCGATTTATTCTTACCCTCGCAGTCTCAGACATCGGCGAGGCATCCCAC
GACGTGCGCGCACTTTCGGTGTCGAGGCTCATGCGTTCAACACGGTGGAG
TTATCCTCGTTTTTTTTTCGACCGTAGGTTCGCTTACTTGTTAAGCAATT
TGCGAGCGTGGAAACTAGAATACTCAGGCGTCGCCGTGATATGGTGACTT
TTAGGTTAGTTCACTAGACTTCATCCTTTCTTGTCATGTGTTTCCGCAGC
GTTCATGCGTTGATGTCTGAGGCTCGTAATCCGAGGTGCTTCTAAAAGCA
TCCCAACGCGTTGTGAATGCCACCCTCCCTCAAGGAAAGTGGAAACGTTA
CACCGCACCGCTCGAAAAATGCTCATCCCACGCAACTAGTCAGAC
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Coding sequence (CDS) from alignment at P-fluviatile_contig6:1914660..1921354-

>mRNA_P-fluviatile_contig6.12509.1 ID=mRNA_P-fluviatile_contig6.12509.1|Name=mRNA_P-fluviatile_contig6.12509.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1818bp|location=Sequence derived from alignment at P-fluviatile_contig6:1914660..1921354- (Porterinema fluviatile SAG_2381)
ATGGGTCTCACAGCGCCTGGAGCAGTGGCGAGGGCTTTCGTGGCTTCTTC
GCTCATCCTTGCACAATTGGCATCCCGCTGTAACGCCTTCGTTGTTGCTG
GAATCGATGGGTCTCACAGCGCCTGGAGCAGTGGCGAGGGCTTTCGTGGC
TTCTTCGCTCATCCTTGCACAATTGGCATCCCGCTGTAACGCCTTCGTTG
TTGCTGGAATCGATGCGGCGGCGTCAGGCTTATCCGCCGTAAATACCGGC
GCCACCGCCGGCGCCGTTCGCAGGGACGCGAACTTCGCTAGCTTGCAGCT
TTGGTGGAGAGCACAGGCCGTTGGAAGGGGTGGGGGGCACGCACGGCGAT
GGAAATCGGCGGCGATAGCACGATTTCGGTGTCCCTTACGTCCGTCGTCG
CCGATGGAGATGATGGCGGGGGAGTGCGTGGGAGGGGACGACATCTCGAG
GGTGCTGTTCGTGTGCAAGTACAACATCATTACGAGATGCGGCGGCGTCA
GGCTTATCCGCCGTAAATACCGGCGCCACCGCCGGCGCCGTTCGCAGGGA
CGCGAACTTCGCTAGCTTGCAGCTTTGGTGGAGAGCACAGGCCGTTGGAA
GGGGTGGGGGGCACGCACGGCGATGGAAATCGGCGGCGATAGCACGATTT
CGGTGTCCCTTACGTCCGTCGTCGCCGATGGAGATGATGGCGGGGGAGTG
CGTGGGAGGGGACGACATCTCGAGGGTGCTGTTCGTGTGCAAGTACAACA
TCATTACGAGCCCGTGCGCAGAGGGATGTCTCAACAAAAAAATACTGGAC
GAGTTCGGGGTGTTCGAGGAGGGTGAAGAGACGTGGGAGGTCGACTCCTG
CTGCACGGGGGGAGGCAGCCCGAACTGCCCGTGCGCAGAGGGATGTCTCA
ACAAAAAAATACTGGACGAGTTCGGGGTGTTCGAGGAGGGTGAAGAGACG
TGGGAGGTCGACTCCTGCTGCACGGGGGGAGGCAGCCCGAACTGGTACAA
GAAGGGCGGGGTTACCTTCTACGAGGGGCAGGAGCCAGACGTTCGCGTGG
AGATCACGGCGGCCCAGAGAAAGATCACCACGAGAGGCCTTCACCTCAAG
AGTGGGGGCGGGGTGCGACCCCTCACGCCGGCCGACTTGGATAAGTTCGA
CGTCATCCTTGGAATTGTACAAGAAGGGCGGGGTTACCTTCTACGAGGGG
CAGGAGCCAGACGTTCGCGTGGAGATCACGGCGGCCCAGAGAAAGATCAC
CACGAGAGGCCTTCACCTCAAGAGTGGGGGCGGGGTGCGACCCCTCACGC
CGGCCGACTTGGATAAGTTCGACGTCATCCTTGGAATTGACGACGACAAT
GTCGAGGCGATCATGACCGCCGCGAAGCACTGGGGCAAGGGCGACTTGGC
CGCAAAGAAGACCAGATCGTTGCTCTCTTACTGCACGGAGTTCAAGGACG
TCAAAACCATCCCGAACCCCTACTACGCCGGGCGGAACGACGACGACAAT
GTCGAGGCGATCATGACCGCCGCGAAGCACTGGGGCAAGGGCGACTTGGC
CGCAAAGAAGACCAGATCGTTGCTCTCTTACTGCACGGAGTTCAAGGACG
TCAAAACCATCCCGAACCCCTACTACGCCGGGCGGAACGGCTTCGAGCAC
CTGGTGGACGTGATCCAGCACGCCGTCGACAACTTGTTCGAGAAGTCCCT
CAGAGGGGAAGCTCTCTCGTACGACTGAGGCTTCGAGCACCTGGTGGACG
TGATCCAGCACGCCGTCGACAACTTGTTCGAGAAGTCCCTCAGAGGGGAA
GCTCTCTCGTACGACTGA
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