mRNA_P-fluviatile_contig6.12475.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig6.12475.1
Unique NamemRNA_P-fluviatile_contig6.12475.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
[Close]
BLAST of mRNA_P-fluviatile_contig6.12475.1 vs. uniprot
Match: A0A6H5KF37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF37_9PHAE)

HSP 1 Score: 208 bits (530), Expect = 2.250e-55
Identity = 168/348 (48.28%), Postives = 209/348 (60.06%), Query Frame = 1 
Query:  847 KRTPALSAKAVE-AGIQLGRGESARKKPAEGFADKVRQRADEVLDAGGEAASA---DDDVVAVEAPAASXXXXXXXXXXXXXSKIWSTGIDVMLAQQGLKHEVWKVTGSGRTVTERWDNYWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTA*SGSQDEEEEKAEADLDKVLTAIVDAKAAAKQDSEESKKKQADEVARNTAMGSMAVSQGLKLCGPGAKATSFGDALAMDNAGFAAFSTQPAASSASGRVRPATXXXXXXXXXXXXXXXXXXXXXAPL-----------PAGGGSASVASGQVPALGDLANDMGAPSITFLSDRTASTREE 1845
            KR PA SAKA++ A  ++ R E AR     GFA   +Q A ++   GGE  +A   DDDV  V APAA              S  W    D  LA+ GL++EVW V GS R+V ERWD  W +LN+EP VR+F  KAS  CK+RYDK+VD QSK +G+A RDSGAGTA SGS+D+ E+  +  LDKVLTAIVDAKAAA+QDSEE+K+K+AD+ A ++AMG  A++QG   CGPGAKATSF +A+A +N    + S   A   ASGRV PA+           XXXXXXXXXX              PAG G     S +VP LG+L   MG+ SI  L+     T EE
Sbjct:    7 KRRPAPSAKALDLARDEVTRREVARAAGRVGFAALGQQHARDLEAGGGEEQAAGRGDDDVQVVAAPAAKQARVRK-------STKWPPTYDFALARAGLQNEVWIVNGSRRSVGERWDTCWETLNQEPLVRMFKDKASKNCKSRYDKIVDDQSKSDGKALRDSGAGTAESGSEDDVEKNTKVQLDKVLTAIVDAKAAARQDSEETKQKKADQAASHSAMGMWAINQGNARCGPGAKATSFEEAVAANNIALGSRSGAAAGGRASGRVSPASSIGGVRPASEAXXXXXXXXXXXXXXXXXXLDDDLSPAGSGP----SRKVPPLGELVKHMGSLSIPTLAQSAGVTTEE 343
[Close]
BLAST of mRNA_P-fluviatile_contig6.12475.1 vs. uniprot
Match: A0A6H5KXD3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD3_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 2.040e-54
Identity = 166/348 (47.70%), Postives = 206/348 (59.20%), Query Frame = 1 
Query:  847 KRTPALSAKAVE-AGIQLGRGESARKKPAEGFADKVRQRADEVLDAGGEAASA---DDDVVAVEAPAASXXXXXXXXXXXXXSKIWSTGIDVMLAQQGLKHEVWKVTGSGRTVTERWDNYWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTA*SGSQDEEEEKAEADLDKVLTAIVDAKAAAKQDSEESKKKQADEVARNTAMGSMAVSQGLKLCGPGAKATSFGDALAMDNAGFAAFSTQPAASSASGRVRPATXXXXXXXXXXXXXXXXXXXXXAPL-----------PAGGGSASVASGQVPALGDLANDMGAPSITFLSDRTASTREE 1845
            KR PA SAKA++ A  ++ R E AR     GFA   +Q A ++   GGE  +A   DDDV  V APAA              S  W    D+ LA+ GL+HEVWKV GSGR+V ERWD  W +LN EP VR+F  K+S  CK RYDK+VD QSK +G+A RDSGAGTA SGS+D+ E+  +  LDKVLTAIVDAKAAA+ DSEE+K+K+AD+ A ++AMG  A++QG   CGPGAKATSF +A+A DN    + S       ASG V PA+             XXXXXXXX              PAG G     S +VP LGDL   MG+ +I  L++    T EE
Sbjct:    7 KRRPAPSAKALDLARDEVTRREVARAAGRVGFAALGQQHARDLEAGGGEEQAAGRGDDDVQVVAAPAAKQARVRK-------STKWPPTYDLALARAGLQHEVWKVNGSGRSVGERWDACWKTLNREPLVRMFKEKSSSICKHRYDKIVDDQSKSDGKALRDSGAGTAESGSEDDVEKNTKVQLDKVLTAIVDAKAAARHDSEETKQKKADQAASHSAMGMWAINQGNARCGPGAKATSFQEAVAADNIALGSRSGAVDGGRASGWVSPASSIGGARPASEASAXXXXXXXXXXXXXXXGLDDDFSPAGSGP----SRKVPPLGDLVKHMGSLTIPMLAESAGVTTEE 343
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BLAST of mRNA_P-fluviatile_contig6.12475.1 vs. uniprot
Match: A0A6H5K0A1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0A1_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 2.760e-52
Identity = 111/186 (59.68%), Postives = 137/186 (73.66%), Query Frame = 1 
Query: 1090 WSTGIDVMLAQQGLKHEVWKVTGSGRTVTERWDNYWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTA*SGSQDEEEEKAEADLDKVLTAIVDAKAAAKQDSEESKKKQADEVARNTAMGSMAVSQGLKLCGPGAKATSFGDALAMDNAGFAAFSTQPAASSASGRVRPAT 1647
            W    D+ LA+ GL+HEVWKV GSGR+V ERWD  W +LN EP VR+F  K+S  CK RYDK+VD QSK +G+A RDSGAGTA SGS+D+ E+  +  LDKVLTAIVDAKAAA+ DSEE+K+K+ADE A ++AMG  A++QG   CGPGAKATSF +A+A DN    + S   A   ASGRV PA+
Sbjct:   75 WPPTYDLALARAGLQHEVWKVNGSGRSVGERWDACWKTLNREPLVRMFKEKSSSICKHRYDKIVDDQSKSDGKALRDSGAGTAESGSEDDVEKNTKVQLDKVLTAIVDAKAAARHDSEETKQKKADEAASHSAMGMWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPAS 260
[Close]
BLAST of mRNA_P-fluviatile_contig6.12475.1 vs. uniprot
Match: A0A6H5L6V4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6V4_9PHAE)

HSP 1 Score: 179 bits (453), Expect = 1.430e-47
Identity = 104/178 (58.43%), Postives = 130/178 (73.03%), Query Frame = 1 
Query: 1114 LAQQGLKHEVWKVTGSGRTVTERWDNYWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTA*SGSQDEEEEKAEADLDKVLTAIVDAKAAAKQDSEESKKKQADEVARNTAMGSMAVSQGLKLCGPGAKATSFGDALAMDNAGFAAFSTQPAASSASGRVRPAT 1647
            L+  GL++ V KV GSGR+V ERWD  W +LN+EP VR+F  K S  CK+RYDK+VD QSK +G+A RDSGAGTA S ++DE E+  +  LDKVLTAIVDAKAAA+QDSEE+K+KQADE A ++AM   A++QG   CGPGAKATSF +A+A DN    + S       ASGRV PA+
Sbjct:    6 LSSTGLQNVVLKVNGSGRSVGERWDTCWKTLNQEPLVRLFKDKTSKNCKSRYDKIVDDQSKSDGKALRDSGAGTAESDAEDEVEKNTKVQLDKVLTAIVDAKAAARQDSEETKQKQADEAASHSAMRMWAINQGNARCGPGAKATSFQEAVAADNIALGSRSGAVDGGRASGRVSPAS 183
[Close]
BLAST of mRNA_P-fluviatile_contig6.12475.1 vs. uniprot
Match: A0A6H5KNA6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNA6_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 1.490e-41
Identity = 93/149 (62.42%), Postives = 114/149 (76.51%), Query Frame = 1 
Query: 1135 HEVWKVTGSGRTVTERWDNYWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTA*SGSQDEEEEKAEADL------DKVLTAIVDAKAAAKQDSEESKKKQADEVARNTAMGSMAVSQGLKLCGPGAKATSFGDA 1563
            +EVWKV GSGR+V ERWD  W +LN+EP VR+F  K S  CK+RYDK+VD QSK +G+A RDSGAGTA SGS+DE E+  +  L      DKVLTAIVDAKAAA+QDSEE+K+K+ADE A ++AMG  A++Q    CGPGAKATSF +A
Sbjct:    4 NEVWKVNGSGRSVGERWDTCWKTLNQEPLVRMFKDKTSKNCKSRYDKIVDDQSKSDGKALRDSGAGTAESGSEDEVEKNTKVQLVRGLEPDKVLTAIVDAKAAARQDSEETKQKKADEAASHSAMGMWAINQSNARCGPGAKATSFEEA 152
[Close]
BLAST of mRNA_P-fluviatile_contig6.12475.1 vs. uniprot
Match: A0A6H5K5U8_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5U8_9PHAE)

HSP 1 Score: 159 bits (403), Expect = 3.470e-37
Identity = 138/362 (38.12%), Postives = 176/362 (48.62%), Query Frame = 3 
Query: 1386 GQSPHRDRGREGCCEARLGREQEKAG*RSRQEHRHGVNGGEPGPETLRARRQGYIVWRCPGHGQRRVCCLLDPTGSQQCQWPSAPGHKY-----------GWYCQRSIEPDPGHGW-DKRRPPAGGWWLCLCCLWTGPGAR-----GLSERHGSAEHHLSF*PHGVHQGGADRFLNLGFTFDLVCAPNAVAMMTVAIGERMLNQRNGQPLDEFIAAGLVED-ELREFPGLGEFVLRKLCDHYSVSDEAFHCLPNSYFFAQGWPLDSSPTAEKMRKLEEQLAELLVLGRVNATIPGPVAAGQGSASGALXXXXXXXXXXXXPSRETSDVSANRNRKARTNKNKDIEDGLDGFMERQMASAAKL 2417
            GQS  RD GREGC EA LG +Q +   R     R G  G +PG   +RA R+GYI+ R     Q RV   L  +G   CQ     G ++           GW CQRSIEPD   G  D    PAG          +GP  +      L +  GS    +     GV    AD FLN GFT D V    AVAMMTV + +R+ +QR+G  + +++     ED +L  F    E V+ KL + Y V    FH LP++ +F  GWP+D   T +K+ ++ +++A LLVLG    T     AAGQ S  G+   X         PS   S  S NR RK R   NK  EDGLD FMERQ+A A  L
Sbjct:  213 GQSSDRDSGREGCREAGLGGDQVEESRRGGLALRDGDVGHQPGQRPMRAGREGYIIPRSCCRRQHRVGFPLRCSGRWPCQRSGESGQQHRGGEARVGGFGGWRCQRSIEPDHDTGGLDDDLSPAG----------SGPSRKVPPLGDLVKHMGSLTIPMLAESAGVTTEEADYFLNTGFTPDEVQPERAVAMMTVLLDKRLSHQRDGDNVQDYMDDLGEEDMQLPGFDRFDESVMFKLLELYGVEKMDFHSLPDANWFHGGWPIDRV-TPDKVLQVTKRVASLLVLG-AGVTNSWLSAAGQTSRPGSARVXRAMSGMD--PSGAASGPSGNRGRKPRAKTNKLAEDGLDSFMERQVADARSL 560
[Close]
BLAST of mRNA_P-fluviatile_contig6.12475.1 vs. uniprot
Match: A0A6H5KAQ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAQ5_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 5.190e-34
Identity = 85/141 (60.28%), Postives = 105/141 (74.47%), Query Frame = 1 
Query: 1225 RVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTA*SGSQDEEEEKAEADLDKVLTAIVDAKAAAKQDSEESKKKQADEVARNTAMGSMAVSQGLKLCGPGAKATSFGDALAMDNAGFAAFSTQPAASSASGRVRPAT 1647
            R+F  K S  CK RYDK+VD QSK +G+AQRDSGAGTA SGS+DE E+  +  L KVLTAIVDAKAAA+QDSEE+K+K+ADE A ++A G+ A++QG   CGPGAKATSF +A+A DN    + S   A   ASGRV PA+
Sbjct:   13 RIFKDKTSENCKERYDKIVDDQSKSDGKAQRDSGAGTAESGSEDEGEKNTKIQLKKVLTAIVDAKAAARQDSEETKQKKADEAAPHSATGTWAINQGNARCGPGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPAS 153
[Close]
BLAST of mRNA_P-fluviatile_contig6.12475.1 vs. uniprot
Match: A0A6H5JB21_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB21_9PHAE)

HSP 1 Score: 140 bits (352), Expect = 6.510e-32
Identity = 88/186 (47.31%), Postives = 112/186 (60.22%), Query Frame = 1 
Query: 1090 WSTGIDVMLAQQGLKHEVWKVTGSGRTVTERWDNYWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTA*SGSQDEEEEKAEADLDKVLTAIVDAKAAAKQDSEESKKKQADEVARNTAMGSMAVSQGLKLCGPGAKATSFGDALAMDNAGFAAFSTQPAASSASGRVRPAT 1647
            W    D+ LA+ GL++EVWKV GSGR+V ERWD  W +LN+EP VR+F  K S  CK+RYDK+VD QSK +G+A  DSGAGTA SGS+ E E+                           K+K+ADE A ++AMG  A++     CGPGAKATSF +A+A DN    + S   A   ASGRV PA+
Sbjct:   84 WPPTYDLALARAGLQNEVWKVNGSGRSVGERWDTCWKTLNQEPLVRMFEDKTSKNCKSRYDKIVDDQSKSDGKALPDSGAGTAESGSEGEVEKXXXXXXXXXXXXXXXXXXXXXXXXXXXKQKKADEAASHSAMGMWAINA---RCGPGAKATSFQEAVAADNIALGSRSGAAAGGRASGRVSPAS 266
[Close]
BLAST of mRNA_P-fluviatile_contig6.12475.1 vs. uniprot
Match: A0A6H5KRG0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRG0_9PHAE)

HSP 1 Score: 139 bits (351), Expect = 6.640e-32
Identity = 81/145 (55.86%), Postives = 101/145 (69.66%), Query Frame = 1 
Query: 1114 LAQQGLKHEVWKVTGSGRTVTERWDNYWASLNEEPFVRVFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTA*SGSQDEEEEKAEADLDKVLTAIVDAKAAAKQDSEESKKKQADEVARNTAMGSMAVSQGLKLCGPGAKAT 1548
            L+  GL++EVWKV GSGR+V ERWD  W +LN EP VR+F  K S   K+ YDK+VD QSK +G+A RDSGAGTA SGS+D+ E+  +  LDKVLTAIVDAKAAA+QD EE++ K+ADE A +   G          CGP  +AT
Sbjct:   78 LSSTGLQNEVWKVNGSGRSVGERWDTCWKTLNHEPLVRMFKDKTSKNFKSCYDKIVDDQSKSDGKALRDSGAGTAESGSEDDVEKNTKVQLDKVLTAIVDAKAAARQDLEETEHKKADEAASHPRWG----------CGPSTRAT 212
[Close]
BLAST of mRNA_P-fluviatile_contig6.12475.1 vs. uniprot
Match: A0A6H5K3N8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3N8_9PHAE)

HSP 1 Score: 132 bits (331), Expect = 6.510e-31
Identity = 109/217 (50.23%), Postives = 134/217 (61.75%), Query Frame = 1 
Query: 1228 VFGSKASGTCKARYDKLVDQQSKKNGQAQRDSGAGTA*SGSQDEEEEKAEADLDKVLTAIVDAKAAAKQDSEESKKKQADEVARNTAMGSMAVSQGLKLCGPGAKATSFGDALAMDNAGFAAFSTQPAASSASGRVRPATXXXXXXXXXXXXXXXXXXXXXAPL-----------PAGGGSASVASGQVPALGDLANDMGAPSITFLSDRTASTREE 1845
            +F  K S  CK+RYDK+VD QSK NG+A RD+GAGTA SG++DE E+  +  LD+VLTA VDAKAAA+QDS E+K K+ADE A ++AMG  A++QG   CG GAKATSF +A+A DN    + S   A   ASGRV PA+          XXXXXXXXXXX              PAG G     S +VP LG+L   MG+ SI  L+     T EE
Sbjct:    1 MFKDKTSKNCKSRYDKIVDDQSKSNGKALRDTGAGTAESGAEDEVEKNTKVQLDQVLTATVDAKAAARQDSVETKHKKADEAASHSAMGMWAINQGKARCGAGAKATSFEEAVAADNIALGSRSGAAAGGRASGRVSPASSIGGARPASEXXXXXXXXXXXXXXXXXXXLDDDLSPAGSGP----SRKVPPLGELVKHMGSLSIPKLAQSAGVTTEE 213
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12475.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KF37_9PHAE2.250e-5548.28Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KXD3_9PHAE2.040e-5447.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K0A1_9PHAE2.760e-5259.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5L6V4_9PHAE1.430e-4758.43Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNA6_9PHAE1.490e-4162.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K5U8_9PHAE3.470e-3738.12Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5KAQ5_9PHAE5.190e-3460.28Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JB21_9PHAE6.510e-3247.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRG0_9PHAE6.640e-3255.86Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K3N8_9PHAE6.510e-3150.23Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig6contigP-fluviatile_contig6:1492640..1497410 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size3009
Cds size807
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig6.12475.1prot_P-fluviatile_contig6.12475.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig6 1496080..1497115 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816989.1710062-UTR-P-fluviatile_contig6:1492639..14937651622816989.1710062-UTR-P-fluviatile_contig6:1492639..1493765Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1492640..1493765 +
1693570690.6846814-UTR-P-fluviatile_contig6:1492639..14937651693570690.6846814-UTR-P-fluviatile_contig6:1492639..1493765Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1492640..1493765 +
1622816989.1812766-UTR-P-fluviatile_contig6:1494663..14949231622816989.1812766-UTR-P-fluviatile_contig6:1494663..1494923Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1494664..1494923 +
1693570690.6940448-UTR-P-fluviatile_contig6:1494663..14949231693570690.6940448-UTR-P-fluviatile_contig6:1494663..1494923Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1494664..1494923 +
1622816989.1910973-UTR-P-fluviatile_contig6:1495558..14960791622816989.1910973-UTR-P-fluviatile_contig6:1495558..1496079Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1495559..1496079 +
1693570690.7087626-UTR-P-fluviatile_contig6:1495558..14960791693570690.7087626-UTR-P-fluviatile_contig6:1495558..1496079Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1495559..1496079 +
1622816989.222855-UTR-P-fluviatile_contig6:1497115..14974101622816989.222855-UTR-P-fluviatile_contig6:1497115..1497410Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1497116..1497410 +
1693570690.7380548-UTR-P-fluviatile_contig6:1497115..14974101693570690.7380548-UTR-P-fluviatile_contig6:1497115..1497410Porterinema fluviatile SAG_2381UTRP-fluviatile_contig6 1497116..1497410 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816989.2009742-CDS-P-fluviatile_contig6:1496079..14965521622816989.2009742-CDS-P-fluviatile_contig6:1496079..1496552Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1496080..1496552 +
1693570690.721334-CDS-P-fluviatile_contig6:1496079..14965521693570690.721334-CDS-P-fluviatile_contig6:1496079..1496552Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1496080..1496552 +
1622816989.210998-CDS-P-fluviatile_contig6:1496781..14971151622816989.210998-CDS-P-fluviatile_contig6:1496781..1497115Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1496782..1497115 +
1693570690.7294307-CDS-P-fluviatile_contig6:1496781..14971151693570690.7294307-CDS-P-fluviatile_contig6:1496781..1497115Porterinema fluviatile SAG_2381CDSP-fluviatile_contig6 1496782..1497115 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig6.12475.1

>prot_P-fluviatile_contig6.12475.1 ID=prot_P-fluviatile_contig6.12475.1|Name=mRNA_P-fluviatile_contig6.12475.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=269bp
MMTVAIGERMLNQRNGQPLDEFIAAGLVEDELREFPGLGEFVLRKLCDHY
SVSDEAFHCLPNSYFFAQGWPLDSSPTAEKMRKLEEQLAELLVLGRVNAT
IPGPVAAGQGSASGALGAGDGRASSSAGPSRETSDVSANRNRKARTNKNK
DIEDGLDGFMERQMASAAKLVADNRQHAEQKEVAAEKRRRAEKEEDEDRS
DALRKQEFQDRMAFERSMREDEHKQRMAEQTRERQEAREDQRLEREHTFA
QLKLQVELEKAKSKNSTG*
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mRNA from alignment at P-fluviatile_contig6:1492640..1497410+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig6.12475.1 ID=mRNA_P-fluviatile_contig6.12475.1|Name=mRNA_P-fluviatile_contig6.12475.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4771bp|location=Sequence derived from alignment at P-fluviatile_contig6:1492640..1497410+ (Porterinema fluviatile SAG_2381)
CCCTGCGTCTGCTGCACGAAGGAATTCTACGGCAAGCGCTGTTCAACCCG
CTGTCAGTCGCGGTGATAGATGTGACCTCAAGGGTGAGAGGGAGAGGGAT
AGGCAGAGAGAGAGAGGGCTATGAAGATGATAACAGTCTTATTGTTTAAC
TCTACGGTATCTACGCTTGCCATGAGCCTGAATTTACCCCCCACGATTGC
ATGGCATGGGTCGCTTTCATCCGCGAGGGGAGCCGTGGACGGGATGATGT
TCATTTGACAGTTTCAGACTCAAAAAACATTTAAGGAACCAGATTTAAGA
GAAAAGCAGATTTAAGCCGGCGTGCTGAGGAACGCTCCCGACAGTCTCGC
TATTTCCAGAAATAGTAAACCTAAACGTGGGTACCACATGTCAGTATATA
AGGCTTGGGGCACCTTATCTCTTGTCGGGCAAACACCCTTTTCACAAGTG
GCGTCGACGGCAGGGTTGTCAACCCTGCAATGTCGGAGTCCCGGGTTCGA
ATCCGGGCACGTGAAAATGGGTGGTTTTTTGTCCGCCGCCAGCCGGTCGG
GTTCCGGTTACCGTACATGCCACGGGGGGTGCGTCGTGGTACCCGCGTAA
TTGTCTACGATGCTGAGCTGTCCGCTCGCTCGTATTCGGGGGGGTATGTG
GGTACCACATGTCAGTATATAAGGCTTGGGGCACCTTATCTCATGTCGGG
CAAACACCCTTATCACATAAATAAATCGAAAAAAAATTCCGAGATAATAA
GCGGAGGTGGAGCGGCTTTATCTAGGAAAAATATTGGAAAAAGCTGAATT
AGGAGACGCACAACCGGTCTGCACCAAGAACATGTCAAGGGTTGGCAAGA
GAACCCCAGCACTCTCGGCGAAGGCCGTAGAGGCTGGGATACAACTCGGG
AGAGGAGAGTCTGCGCGAAAGAAGCCCGCCGAGGGATTTGCGGACAAGGT
TCGGCAACGCGCCGATGAGGTCTTGGACGCCGGGGGAGAGGCGGCCTCTG
CAGACGACGACGTGGTAGCAGTAGAAGCACCAGCAGCGAGTGCAGCGCCA
TTAGCGAAGAAGGCGAAGAAGTCCAGGAAGAGCAAGATATGGAGCACGGG
GATCGATGTAATGCTGGCGCAACAAGGTAAGTTTCCTTGGCGGCGCTCAG
GGGCAGAAGTTGTCGATGTGCTGCTGGTGGCGGAAGGCTGTGGTTGCGTT
GCCTACTCTCACGGTGCCTGTACCCTCTCGAACCCCCCGCTGCCGAACGC
CACATCGCCGATGCAACGCTCGTCAGCGAGGGAAAACTTCATCCCCGGGT
ACTGGTTTGTTGCCGGGTGAAGGGTGCAGAGAGAGAAACACACAGAGATG
CGCGCGAACAATAGAAGGCCGAAGAAGAAGATAAACAACGCGCATGTGTT
TGAATCCAAAAATGCCGCTGGTGCCGCGAGATCCAAGGATCACGCACTCA
CAAGTCCACAGCAGATACGTTGCAATCACCTCAGGAGAAGGAGCACAGCG
AACACACGCAGACACTAGAATGCAATACAAACGGCGCGGTTTTTGCATCG
ATGTCCAAAACTTGCATCTGATCATGTATAACTTCGAAGCTGAAGTGGTG
GTCTACATGTCGTTCCTGTTCTCGCTCCCGCACACCGCAATCAAATCCTC
TTACATACACGGCCGCGCCACATGGCGGGGTCGAGCGGGCGACACAACTA
TTTCTAAAGTTATTCTTGATGAAGGAAGCAATTTCGTCCCGAATTGCTGT
TAGTGGTGTACGATGCGGACGTATAACTACTGCCTAGACTAGTAAAGCAT
ACCTGCTGTGGGTAGGTGTTTCTTCTGCACAGAAAGCAACCATGTGCCCG
CCTTTCGTGAGAGCAGAAGAATGGAACAAGTTTTCCCCCTGAAGCATAGA
CGGCCAGCGCACCACGTTTTGGTTTCGTTGATTCGTGTCAAAAATATCCT
GCAATCAAGTCTCGAACGACTTTGTGAGCGGGCGCCGACATCATACCCTG
CCGGCATACCCTTCGCCGCCATAGGTCTGAAGCATGAAGTCTGGAAAGTG
ACTGGTAGTGGGCGGACGGTCACGGAGAGGTGGGACAACTACTGGGCCAG
CCTTAACGAGGAGCCGTTCGTCAGGGTGTTCGGCAGCAAGGCCTCTGGCA
CTTGCAAGGCGCGCTACGACAAGCTTGTCGACCAGCAGAGCAAGAAAAAT
GGTCAAGCTCAGCGGGACTCCGGAGCTGGCACCGCCTAGAGTGGTTCGCA
AGACGAAGAAGAGGAGAAGGCAGAGGCCGACCTGGTGAGAGGCATTGGTG
ATTAACCTGTTGTTGTCGCCACAACGGTTTTTGCGATGCCAGCCCGCCTT
CATGATCCCGAAATCGATTTACGTTTGTCCCCGTTGGTTTGCGGTTAGTA
CTGCTGGCGGGCGCACACAATGAGGTTGTCGCCTACCAAATACCGTACGA
AATACCTCGTAGTTTGAAGTCTGAAGCTTCTCACACTCCGCGGACACCTT
CCACCATGACTAGTGCAAATGGGTAAACGCGGGATCCAAAACGCGATAAA
ATTACACAATCTGTGTGGGACTGAAAAGTATAGTCCGGCACAGCAGTTCC
GCCCCAATATAAAAAAAAAATGTCCAAGAACAAACACCCCATTTCCGTGC
GAAACTTGAAGCGACGAACACAACCTCTCGAGTACGTACGATTTGTGTAG
GTGTAAACTGAGAAGTATCTCCCACGAAAATTGACGGTATCGTTAGGTGG
CAGAAATACCTCTGTCCCATCGCTCGGCGCCTGTTCTTCGGGGCTGACGC
AAAAAGAAAACGTGGGTGACGACCACAGACCAAACTATTATCGCCCGACA
TCGAGTGGTACAGGGCTCAAGCCGCTGCCACGCCCGCCCTTGATCGTTCG
TACGCCATTTTCTGCTCAGGACAAAGTCCTCACCGCGATCGTGGACGCGA
AGGCTGCTGCGAAGCAAGACTCGGAAGAGAGCAAGAAAAAGCAGGCTGAC
GAAGTCGCCAGGAACACCGCCATGGGGTCAATGGCGGTGAGCCAGGGCCT
GAAACTTTGCGGGCCAGGCGCCAAGGCTACATCGTTTGGAGATGCCCTGG
CCATGGACAACGCCGGGTTTGCTGCCTTCTCGACCCAACCGGCAGCCAGC
AGTGCCAGTGGCCGAGTGCGCCCGGCCACAAGTACGGCTGGTACTGCCAG
CGGTCGATCGAGCCCGACCCTGGGCATGGGTGGGACAAGCGACGCCCCCC
TGCCGGCGGGTGGTGGCTCTGCCTCTGTTGCCTCTGGACAGGTCCCGGCG
CTCGGGGACTTAGCGAACGACATGGGAGCGCCGAGCATCACCTTTCTTTC
TGACCGCACGGCGTCCACCAGGGAGGAGCGGACCGGTTCCTCAACTTGGG
CTTTACGTTCGACCTCGTTTGTGCTCCCAACGCCGTCGCCATGATGACGG
TGGCAATCGGAGAAAGGATGCTGAATCAGCGCAACGGACAACCCCTCGAC
GAGTTCATAGCAGCCGGCCTTGTTGAGGATGAACTACGGGAGTTTCCCGG
GTTGGGGGAGTTTGTCTTGCGTAAGCTGTGCGATCACTACAGCGTTAGCG
ACGAAGCCTTCCACTGCTTGCCCAACTCGTACTTCTTTGCTCAAGGATGG
CCCCTAGACTCGAGTCCTACGGCGGAGAAGATGAGGAAGCTGGAAGAGCA
GCTGGCGGAGCTGTTGGTGCTCGGTCGCGTCAACGCGACCATACCCGGTC
CCGTCGCCGCCGGTCAAGGGTCCGCCTCCGGTGCTCTTGGCGCCGGGGAC
GGGAGGGCTAGTTCGAGCGCGGGCCCTTCGCGCGAGACCAGTGACGTATC
GGCAAACCGAAACAGGAAGGCCCGTACAAACAAGAACAAGGACATCGAAG
ACGGACTCGATGGGTAAGGCCGAAGTTCTGTGGATACTCTCAATGTCGCT
GATTTCGCCACCCCTCAACTTGGCTTGGTGTTACGTGTTCTTGTGTCTCT
TTGGACGATAGCGGTTTGCCAGCATAATAGCTATTTTTGGAGTTAGCTGT
TGCACCAGTTGAGGTAGGGCAGAGCGCACGCCCTTGGCGATTGAATAACG
TTGAAGAAATCCCCCCACTGTTGTCCGTGTCGCTTGTCGCAGGTTTATGG
AACGTCAGATGGCTTCGGCAGCGAAACTCGTCGCTGACAACAGGCAGCAC
GCCGAGCAGAAGGAAGTCGCGGCTGAGAAACGCAGGAGGGCTGAGAAGGA
GGAGGACGAAGATCGAAGCGACGCGCTGAGGAAGCAGGAGTTTCAGGACA
GGATGGCCTTCGAGAGAAGCATGCGGGAGGACGAGCACAAGCAGAGGATG
GCGGAGCAAACTCGAGAAAGGCAAGAGGCCCGTGAAGACCAGCGGTTGGA
ACGGGAGCACACGTTCGCCCAGCTCAAACTGCAGGTAGAGCTGGAAAAAG
CCAAATCAAAGAATTCCACCGGATAATGGAGTGCTGAGGTCCCGCACTAG
CCGCGTCCTTGATGTGCCACGGCAGGTTTTCCCACGGCAGGCTTTCTAGT
TTTCAGCACAACATCCGCGGTGTCTTGCGCATTTTCTGCTGCGTTCGCTT
TGCGCTTTGCTTTTCTTCTGCGTTCGCTTTGCTTGTGCGCGGGTGGGAGG
GGGAGAAGGTTTGTTGTTTGATGCCGACACTTCTGCCTGTGTTCGGGCAC
GATGCGTTTTTTTTTACGCCGTCAGCAGCAGTCACCCGAGAATGAGCGTG
GCATCCGTCGCGTCTTGCACG
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Coding sequence (CDS) from alignment at P-fluviatile_contig6:1492640..1497410+

>mRNA_P-fluviatile_contig6.12475.1 ID=mRNA_P-fluviatile_contig6.12475.1|Name=mRNA_P-fluviatile_contig6.12475.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1614bp|location=Sequence derived from alignment at P-fluviatile_contig6:1492640..1497410+ (Porterinema fluviatile SAG_2381)
ATGATGACGGTGGCAATCGGAGAAAGGATGCTGAATCAGCGCAACGGACA
ACCCCTCGACGAGTTCATAGCAGCCGGCCTTGTTGAGGATGAACTACGGG
AGTTTCCCGGGTTGGGGGAGTTTGTCTTGCGTAAGCTGTGCGATCACTAC
AGCGTTAGCGACGAAGCCTTCCACTGCTTGCCCAACTCGTACTTCTTTGC
TCAAGGATGGCCCCTAGACTCGAGTCCTACGGCGGAGAAGATGAGGAAGC
TGGAAGAGCAGCTGGCGGAGCTGTTGGTGCTCGGTCGCGTCAACGCGACC
ATACCCGGTCCCGTCGCCGCCGGTCAAGGGTCCGCCTCCGGTGCTCTTGG
CGCCGGGGACGGGAGGGCTAGTTCGAGCGCGGGCCCTTCGCGCGAGACCA
GTGACGTATCGGCAAACCGAAACAGGAAGGCCCGTACAAACAAGAACAAG
GACATCGAAGACGGACTCGATGGATGATGACGGTGGCAATCGGAGAAAGG
ATGCTGAATCAGCGCAACGGACAACCCCTCGACGAGTTCATAGCAGCCGG
CCTTGTTGAGGATGAACTACGGGAGTTTCCCGGGTTGGGGGAGTTTGTCT
TGCGTAAGCTGTGCGATCACTACAGCGTTAGCGACGAAGCCTTCCACTGC
TTGCCCAACTCGTACTTCTTTGCTCAAGGATGGCCCCTAGACTCGAGTCC
TACGGCGGAGAAGATGAGGAAGCTGGAAGAGCAGCTGGCGGAGCTGTTGG
TGCTCGGTCGCGTCAACGCGACCATACCCGGTCCCGTCGCCGCCGGTCAA
GGGTCCGCCTCCGGTGCTCTTGGCGCCGGGGACGGGAGGGCTAGTTCGAG
CGCGGGCCCTTCGCGCGAGACCAGTGACGTATCGGCAAACCGAAACAGGA
AGGCCCGTACAAACAAGAACAAGGACATCGAAGACGGACTCGATGGGTTT
ATGGAACGTCAGATGGCTTCGGCAGCGAAACTCGTCGCTGACAACAGGCA
GCACGCCGAGCAGAAGGAAGTCGCGGCTGAGAAACGCAGGAGGGCTGAGA
AGGAGGAGGACGAAGATCGAAGCGACGCGCTGAGGAAGCAGGAGTTTCAG
GACAGGATGGCCTTCGAGAGAAGCATGCGGGAGGACGAGCACAAGCAGAG
GATGGCGGAGCAAACTCGAGAAAGGCAAGAGGCCCGTGAAGACCAGCGGT
TGGAACGGGAGCACACGTTCGCCCAGCTCAAACTGCAGGTAGAGCTGGAA
AAAGCCAAATCAAAGAATTCCACCGGATAAGTTTATGGAACGTCAGATGG
CTTCGGCAGCGAAACTCGTCGCTGACAACAGGCAGCACGCCGAGCAGAAG
GAAGTCGCGGCTGAGAAACGCAGGAGGGCTGAGAAGGAGGAGGACGAAGA
TCGAAGCGACGCGCTGAGGAAGCAGGAGTTTCAGGACAGGATGGCCTTCG
AGAGAAGCATGCGGGAGGACGAGCACAAGCAGAGGATGGCGGAGCAAACT
CGAGAAAGGCAAGAGGCCCGTGAAGACCAGCGGTTGGAACGGGAGCACAC
GTTCGCCCAGCTCAAACTGCAGGTAGAGCTGGAAAAAGCCAAATCAAAGA
ATTCCACCGGATAA
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