mRNA_P-fluviatile_contig6.12345.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig6.12345.1 vs. uniprot
Match: A0A6H5K3R7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3R7_9PHAE) HSP 1 Score: 528 bits (1359), Expect = 5.760e-169 Identity = 323/506 (63.83%), Postives = 390/506 (77.08%), Query Frame = 1
Query: 1 DGQLAVVPVLETERDMLRQALAHERASREEELHGKDDEIATLVAKVAQLESSAEADAKDLQGSRTKADETQRKLHAEKERHAATAALLEEEKARYERCRSRLETSQEHLADLNDRFNELRAEIESSAENAEEQAGEASDALAAAKMEVKRLRTVLGTNNAAAALEAATLKVSLLSEELRNARSEAREANNALREVXXXXXXXXXXXEQAKTLVRTKSVSTRSDTSQKSEGGLSWVGSFMGSMNGDNDVGDDDLEEDQERSDRMSSALMAGGRRFEKGKWAVEKWISLVRFRKAVNAHTAEVTRLENLLRIAEGGEERSRLTSELQEVSSRYSLEDMEAAMHLEVAALKLQAAGRQSGGGVG--AESLGGQINAVWEAKLAEAAK----RSKEALANMAALHDKTVQVLREELDNREKSIGKLEAEAVEMKDKLKRLARLEKNEKGHNAMTEELKKMEEETGISVCLDSSLEFASMEGDLSKEDEARLIEELNNAREEIKNIKMRQA 1500
D QL V+PVL ERD LR+ L E +SRE++ H KD EIATL KVA LESSAEADAK + +R K ++TQR+LH EK HAATA LLEEEK +YERCRSRLETSQEHLADLN+RFNE+RAE+E+SAENAEE+AGEASDALAAAK+E++RLRTVLGT++AAAALEAATLK+S LSEEL ARSEAREAN+AL+E +++K+L+ +K+ + Q S+GGLSW GSF DD+L + ER RMSSA+ GGR++E+GKWAVEKWI+LVRFRKAV+AH AEVTRL LLRIA+GGEERSRL +EL+ +SS +SL+DME AMH EVAALKLQAAG+ GG A S G +A WEAKL E+A+ S+ LA++AALH+KTV+ LR EL +++ +LE+EA E A+LEKN+KGHNAMTEELKKM+EETGISV DSSLEF S+EGDLSKEDEARLIEEL+NAR+EIKNIKMRQA
Sbjct: 244 DEQLTVIPVLTKERDKLREELDQEISSREQDQHRKDIEIATLNTKVAHLESSAEADAKRILEARNKTEDTQRRLHNEKAEHAATARLLEEEKGKYERCRSRLETSQEHLADLNERFNEMRAEVEASAENAEEEAGEASDALAAAKVEIQRLRTVLGTSDAAAALEAATLKISTLSEELHAARSEAREANDALQEDREKLKGAQAELDKSKSLLLSKASMLSDRSRQSSDGGLSWAGSFE-------PFDDDELLYEGERQGRMSSAMAPGGRKYEQGKWAVEKWIALVRFRKAVDAHNAEVTRLRKLLRIAQGGEERSRLEAELEIMSSNHSLKDMEDAMHKEVAALKLQAAGQSDGGSERDRARSSAGLDDAAWEAKLEESAEAQRLESERQLADLAALHEKTVEGLRLELSTERENVERLESEAEEXXXXXXXXAKLEKNKKGHNAMTEELKKMQEETGISVGFDSSLEFTSVEGDLSKEDEARLIEELDNARDEIKNIKMRQA 742
BLAST of mRNA_P-fluviatile_contig6.12345.1 vs. uniprot
Match: D7FHT3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHT3_ECTSI) HSP 1 Score: 504 bits (1299), Expect = 8.630e-166 Identity = 315/506 (62.25%), Postives = 381/506 (75.30%), Query Frame = 1
Query: 1 DGQLAVVPVLETERDMLRQALAHERASREEELHGKDDEIATLVAKVAQLESSAEADAKDLQGSRTKADETQRKLHAEKERHAATAALLEEEKARYERCRSRLETSQEHLADLNDRFNELRAEIESSAENAEEQAGEASDALAAAKMEVKRLRTVLGTNNAAAALEAATLKVSLLSEELRNARSEAREANNALREVXXXXXXXXXXXEQAKTLVRTKSVSTRSDTSQKSEGGLSWVGSFMGSMNGDNDVGDDDLEEDQERSDRMSSALMAGGRRFEKGKWAVEKWISLVRFRKAVNAHTAEVTRLENLLRIAEGGEERSRLTSELQEVSSRYSLEDMEAAMHLEVAALKLQAAGRQSGGGVG--AESLGGQINAVWEAKLAEAAK----RSKEALANMAALHDKTVQVLREELDNREKSIGKLEAEAVEMKDKLKRLARLEKNEKGHNAMTEELKKMEEETGISVCLDSSLEFASMEGDLSKEDEARLIEELNNAREEIKNIKMRQA 1500
D QL V+P L ERD LR+ L E +SRE++ H KD EIATL AKVA LESSAEADAK + +R+K ++TQR+L+ EK HAATA LL EE+ +YERCRSRLETSQEHLADLN+RFNE+RAE+E+SAENAEE+AGEASDALAAAK+E++RLRTVLGT++AAAALEAATLK+S LSEEL ARSEAREAN+AL+E +++K+L +K+ Q S+GGLSW GSF+ + DD+L + ER RMSSA+ GGR+FE+GKWAVEKWI+LVRFRKAV+AH AEVTRL LLRIA+GG+ERSRL SEL+ +SS +SLEDME AMH EVAALKLQAAG+ GG A S G A WEAKLAE+A+ S+ LA++AALH++TV+ LR EL +++ +LE+EA KGHNAMTEELKKMEEETGI V DSSLEF ++EGDLSKEDEARLIEEL+NAR+EIKNIKMRQA
Sbjct: 233 DEQLTVIPALIKERDKLREELDQEISSREQDQHRKDVEIATLKAKVAHLESSAEADAKRILEARSKTEDTQRRLNNEKAEHAATAGLLLEEEGKYERCRSRLETSQEHLADLNERFNEMRAEVEASAENAEEEAGEASDALAAAKVEIQRLRTVLGTSDAAAALEAATLKISTLSEELHAARSEAREANDALQEDREKLKGAQAELDKSKSLRLSKASMLSDRGRQSSDGGLSWAGSFIEPFD------DDELLYEGERQGRMSSAMAPGGRKFEQGKWAVEKWIALVRFRKAVDAHNAEVTRLRTLLRIAQGGDERSRLESELEVMSSNHSLEDMEDAMHKEVAALKLQAAGQSDGGSERNRARSSAGLDGAAWEAKLAESAEAQRLESERQLADLAALHEQTVEGLRLELSTERENVERLESEAEXXXXXXXXXXXXXXXXKGHNAMTEELKKMEEETGIRVGFDSSLEFNTVEGDLSKEDEARLIEELDNARDEIKNIKMRQA 732 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig6.12345.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig6.12345.1 >prot_P-fluviatile_contig6.12345.1 ID=prot_P-fluviatile_contig6.12345.1|Name=mRNA_P-fluviatile_contig6.12345.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=500bp DGQLAVVPVLETERDMLRQALAHERASREEELHGKDDEIATLVAKVAQLEback to top mRNA from alignment at P-fluviatile_contig6:248660..257306+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig6.12345.1 ID=mRNA_P-fluviatile_contig6.12345.1|Name=mRNA_P-fluviatile_contig6.12345.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=8647bp|location=Sequence derived from alignment at P-fluviatile_contig6:248660..257306+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig6:248660..257306+ >mRNA_P-fluviatile_contig6.12345.1 ID=mRNA_P-fluviatile_contig6.12345.1|Name=mRNA_P-fluviatile_contig6.12345.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3000bp|location=Sequence derived from alignment at P-fluviatile_contig6:248660..257306+ (Porterinema fluviatile SAG_2381)back to top |