mRNA_P-fluviatile_contig59.12312.1 (mRNA) Porterinema fluviatile SAG_2381

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-fluviatile_contig59.12312.1
Unique NamemRNA_P-fluviatile_contig59.12312.1
TypemRNA
OrganismPorterinema fluviatile SAG_2381 (Porterinema fluviatile SAG_2381)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig59.12312.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-fluviatile_contig59contigP-fluviatile_contig59:878958..882624 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Porterinema fluviatile SAG_23812021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons4
Model size916
Cds size915
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-fluviatile_contig59.12312.1prot_P-fluviatile_contig59.12312.1Porterinema fluviatile SAG_2381polypeptideP-fluviatile_contig59 878958..882624 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816956.6902122-CDS-P-fluviatile_contig59:878957..8792591622816956.6902122-CDS-P-fluviatile_contig59:878957..879259Porterinema fluviatile SAG_2381CDSP-fluviatile_contig59 878958..879259 -
1693570608.7646196-CDS-P-fluviatile_contig59:878957..8792591693570608.7646196-CDS-P-fluviatile_contig59:878957..879259Porterinema fluviatile SAG_2381CDSP-fluviatile_contig59 878958..879259 -
1622816956.7020602-CDS-P-fluviatile_contig59:880023..8801811622816956.7020602-CDS-P-fluviatile_contig59:880023..880181Porterinema fluviatile SAG_2381CDSP-fluviatile_contig59 880024..880181 -
1693570608.7746744-CDS-P-fluviatile_contig59:880023..8801811693570608.7746744-CDS-P-fluviatile_contig59:880023..880181Porterinema fluviatile SAG_2381CDSP-fluviatile_contig59 880024..880181 -
1622816956.714757-CDS-P-fluviatile_contig59:881346..8815361622816956.714757-CDS-P-fluviatile_contig59:881346..881536Porterinema fluviatile SAG_2381CDSP-fluviatile_contig59 881347..881536 -
1693570608.7852776-CDS-P-fluviatile_contig59:881346..8815361693570608.7852776-CDS-P-fluviatile_contig59:881346..881536Porterinema fluviatile SAG_2381CDSP-fluviatile_contig59 881347..881536 -
1622816956.7258687-CDS-P-fluviatile_contig59:882359..8826241622816956.7258687-CDS-P-fluviatile_contig59:882359..882624Porterinema fluviatile SAG_2381CDSP-fluviatile_contig59 882360..882624 -
1693570608.7956498-CDS-P-fluviatile_contig59:882359..8826241693570608.7956498-CDS-P-fluviatile_contig59:882359..882624Porterinema fluviatile SAG_2381CDSP-fluviatile_contig59 882360..882624 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-fluviatile_contig59.12312.1

>prot_P-fluviatile_contig59.12312.1 ID=prot_P-fluviatile_contig59.12312.1|Name=mRNA_P-fluviatile_contig59.12312.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=305bp
PPGRPPLRTRLERACRLEVVREYACWLVFCVLRSDHRHTHRRACASSLPA
GPKIYCFRGKRDGCYVRTCARKVVLLAVSSIGIWTAAALTSSTGPPASIS
RRGSRNQGLGATIRQRSNNPGAEQRRSRAPMPRYFFAGFGAPARSAAVSP
KRPSLRSKHVECSTVVGPWPSSFAGQETAELKSAGDGGGCSSGARPEALS
IGSPGNGGGGDGGGRGSGRGGGGRGGDVIARYADASVMLLPSPRATTAAA
TAADCTAMSTPAMAAARAAARARVTVTAANASLTASQETSQLAPPKSIAA
RDIPP
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mRNA from alignment at P-fluviatile_contig59:878958..882624-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-fluviatile_contig59.12312.1 ID=mRNA_P-fluviatile_contig59.12312.1|Name=mRNA_P-fluviatile_contig59.12312.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3667bp|location=Sequence derived from alignment at P-fluviatile_contig59:878958..882624- (Porterinema fluviatile SAG_2381)
CCTCCTGGAAGACCACCGCTCCGGACACGACTGGAAAGGGCCTGCCGCCT
AGAAGTGGTGAGAGAGTACGCGTGTTGGTTGGTTTTCTGTGTGCTGCGTT
CTGACCACAGGCACACACACAGACGCGCGTGCGCTTCCTCTCTCCCCGCC
GGCCCGAAGATTTATTGCTTTCGGGGGAAACGCGATGGCTGCTACGTGCG
GACGTGCGCTAGAAAGGTGGTCCTTCTCGCTGTCTCCAGCATTGGGATCT
GGACTGCAGCAGCATGTATGGCTCCCGCAAGTAGTTGAAGGGGTCCGCCG
GTTGTGTCGTTTGCAGCAAGAAGAGGGAGAGCGCGCTGCTTGCTGGGGAT
TCAAAAAAACTCCAACGGCCAAAGTTTTCCAATCGCCGGGTTCAAGCTGT
GTCGCCGGCGGAGTGACACCCAGCACAGTGACAGGGAGAGATAGGCCGAA
AAAAGCAAAGGACTGGCCGCACGCGCGTGAGGCAAAGAGCGTGAGGAACA
TGCAAAAGCCGGCCAGTTTTGTTGAGGGGAAATCGTTTCCTGTGCCGAGA
CCCTGTTAAGAACACAGACGCACACACATGCACGAGCGCGCCGGAGCGCG
CCGGTGCCGAGAGGCGGCCAGGCAGCAGTCGCAGCAGCTACAGGCTGGGA
TGGATCTAGCAGCAGAGCGGCAGTTTTTCGAGAAAAGACTGCCCAATCCG
TCCTGATGCACATGATGCCCCATCCGATCCACACATGCAAACTCCACACA
CACACATGCCGCAAATAGTTACATCGGCATATACGCTAGTTCCAAAGAAT
GTACACCTGCCGCCGGAAGATGGCTTCTTGCAAGACGAGAGATCGGGATT
GCCCCAACAGCACAGCAGGTGAAAGGGACCCAGCAGTCGCGTAGCGCACA
CCTTTGACAGAGAAGGGCGCCGCATTCACCTCTCACTCATCGTGTTCCCA
TCACATCCCTTTCCCCCTTCTCTCTTTCCTCTCTCTCTTCCCTGTTTCCC
TGGCTCCTTTCTCTCTTCCACTCTCCGCTTGATTGCCTCTTTACTCTTTG
CTTGCATGCCACACCCCGCCGCCGCCTCGCGGTCGTAGTGACAAGCAGCA
CCGGTCCACCAGCGTCAATCAGCAGGCGAGGCAGCAGAAATCAGGGTCTT
GGAGCAACAATCCGGCAGCGGAGCAACAACCCGGGAGCGGAGCAACGCCG
AAGCAGGGCGCCGATGCCGCGTTATTTTTTCGCCGGCTTCGGCGCGCCGG
CGCGGAGCGCAGCCGTATCTCCCAAGCGGTGAGCTCCTTCGTGTTTTCCA
GCGTTTTCGTACTTTCACATGTAGCGGGGTCGACTTGATTGGGTATGGGC
GACGTTGAACTTTGAATGATTCAAGCTCCCATGGTTTTTGAGGTACTTTT
TGTTTTCGCATACGCCAGCGGTCTGTTCCTCCAGATGGAATTAACACATC
CAGGCAGATACTTGTTGTAGACAAGTAAGTCTAGTTGTGCCCCATATCCC
AGCAAAATCACATCCCGTTTTTTATCCAGGGCATCGACGACTTCTTGTTC
GGTATTCTTGTCTGGATAGAGTACAGCCCTTCGTCATATAGGAGGATGGG
TTTTTCGCCTCGCTCATATTACTGTTTCCTGTTTTTCATCACATGAAGAG
GTAGGTGACAAAGCGGATGGGTCTTATCGGTGGCAAATATCTCGCGAGGA
AGGAAATGTCTTGCAACATGTGATCGAATGAATTCATGTTTATGCCTGCT
ATGCGCCGTTCTCGAAATGATACCGGTGCGTCGGTTCAGAACTGCGGGTG
TTTCAAGGCGCAACTAGTGACGGTTGACTCGGCCGTGCCAGCTGATTAAA
GTAGTGCGAGTGTGCCGCTTTCATACCGGTGTGACGGTCGACCTACGATG
ATTGGATGGACAGATTTTGATGTCGACGAACTCGAAAGGCACGTGCGTTC
TGACCCACATCGCCCGTATCCTCAAGCATTACTCATCCCAGTCCCGTGTA
GTGCCAGTAAACCCGTACCAGTCACGTTGTTTGCTGCTGCTGGCGCACAC
AGCCGGCATCCACTTGGAACCCCCAGCCACGCCGACTCCACCCGCACTGC
TGCGTCTCCCTTATCCCAGAATCGGACACATTTCAATGTCCGCGCCCTTT
CTCTTTCTCCATGCAGCACTACCGCCATCGACAACGGCACCAGCGCATAC
GCGGCTTGACGAGCAAAGACACGAAATTGCCTGCAACCTTCTCGTCAAAG
AATGATTTTCAAAAAAGATTCCATGTGGACTCAAAACCCTCTGTGAAAAC
GTTTCTCCTCATGTGTCGCCGTCTTGGTGACCGATGATCGTCGTGCTGAC
AAATGATCGTTTTGATGACCGATGGTCGTTTTAATGACCGGTGATCGTTG
TGCTGACCGATGATCGTTGCATGATTGGTGACCGGCACGTAAGCCCAAGC
CTCCGCTCGAAGCACGTCGAATGCTCCACGGTGGTGGGTCCGTGGCCGTC
GTCGTTCGCCGGGCAAGAGACCGCGGAGCTTAAATCCGCAGGCGACGGCG
GCGGCTGTTCAAGCGGTGCTCGCCCGGAAGCCTTGTCCATCGGGTCGCCA
GGTGTCCTCTTCTTGGAATCACGTTGTGCATTTTTTCCACGGCGTGGTGT
TGTTCATCTTGTGTGTTTTTTGCTTCTCCGCCGGTGGGTGTGCTTGTGCT
CGCGGCACGAGGAAAGAGCAACGTTGACCTTGATCATTTCTTGGAGTGTC
GTCGCCGCTGCTGCAGCGCTTGTCCATGTACTTGTCGTCGTTCGCTTTTG
CTGTCGCGTGTCCCTGACTTGCTCGGTTTTGCGAACGTTTTGTGCATTGG
TGTCTAGGAAGATGCCTTGGTGGCCAGGCACGGTAACCAGCGACACAAAA
AAAAACAAACTTTTTCTTGGGTCCAGAGGGGGACGAATTTTAGAGGTTGA
CTTTGAAGGTGGGACACTCTGCCTTGAAGGCGGAACACGCTGCCTTAAGC
AAATATATACTTCTCTCTGCATTCGGAGTTGCACAATCTTCCTTGAAGTT
CCGTCAGATCCATGAAGGCGCTGCATTAACTTGTACGGCTACCGCTCCGG
AAGAAAATGAGAATGGTGCCTCGGAAAGGGGTGAATGGCATTGAAAAGCA
CGACAATTCTTCGACAAACGTACAGCCGACAAGTTTTCGGCCTTTTCGAA
CTCTGTACATTATCGTCGCCAGCAGGGCTTTCACCGCCGCAGATACACTC
TCACTCGTGGTGTTTGATTTCTATCGATTTGCAACGAAGATTCCGCCGTT
CAACGCACGAGCAACCTTTCCCCGTCTTGAAGCGACATCGCTTCTCCGAC
CCCACCGACGACCAGGAAATGGTGGTGGCGGTGATGGTGGCGGCAGGGGC
AGCGGCAGAGGCGGCGGGGGTCGCGGCGGCGACGTCATCGCCCGCTACGC
CGACGCCTCGGTAATGCTCCTCCCTTCTCCACGTGCCACGACTGCCGCAG
CTACCGCCGCCGACTGCACCGCCATGAGCACCCCGGCGATGGCGGCTGCC
AGGGCGGCGGCTAGAGCGAGGGTCACGGTGACGGCGGCAAACGCATCGTT
GACAGCCTCTCAGGAAACTTCGCAGCTCGCCCCGCCGAAGAGCATCGCCG
CACGCGATATCCCTCCC
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Coding sequence (CDS) from alignment at P-fluviatile_contig59:878958..882624-

>mRNA_P-fluviatile_contig59.12312.1 ID=mRNA_P-fluviatile_contig59.12312.1|Name=mRNA_P-fluviatile_contig59.12312.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1830bp|location=Sequence derived from alignment at P-fluviatile_contig59:878958..882624- (Porterinema fluviatile SAG_2381)
CCTCCTGGAAGACCACCGCTCCGGACACGACTGGAAAGGGCCTGCCGCCT
AGAAGTGGTGAGAGAGTACGCGTGTTGGTTGGTTTTCTGTGTGCTGCGTT
CTGACCACAGGCACACACACAGACGCGCGTGCGCTTCCTCTCTCCCCGCC
GGCCCGAAGATTTATTGCTTTCGGGGGAAACGCGATGGCTGCTACGTGCG
GACGTGCGCTAGAAAGGTGGTCCTTCTCGCTGTCTCCAGCATTGGGATCT
GGACTGCAGCAGCATCCTCCTGGAAGACCACCGCTCCGGACACGACTGGA
AAGGGCCTGCCGCCTAGAAGTGGTGAGAGAGTACGCGTGTTGGTTGGTTT
TCTGTGTGCTGCGTTCTGACCACAGGCACACACACAGACGCGCGTGCGCT
TCCTCTCTCCCCGCCGGCCCGAAGATTTATTGCTTTCGGGGGAAACGCGA
TGGCTGCTACGTGCGGACGTGCGCTAGAAAGGTGGTCCTTCTCGCTGTCT
CCAGCATTGGGATCTGGACTGCAGCAGCATTGACAAGCAGCACCGGTCCA
CCAGCGTCAATCAGCAGGCGAGGCAGCAGAAATCAGGGTCTTGGAGCAAC
AATCCGGCAGCGGAGCAACAACCCGGGAGCGGAGCAACGCCGAAGCAGGG
CGCCGATGCCGCGTTATTTTTTCGCCGGCTTCGGCGCGCCGGCGCGGAGC
GCAGCCGTATCTCCCAAGCGTGACAAGCAGCACCGGTCCACCAGCGTCAA
TCAGCAGGCGAGGCAGCAGAAATCAGGGTCTTGGAGCAACAATCCGGCAG
CGGAGCAACAACCCGGGAGCGGAGCAACGCCGAAGCAGGGCGCCGATGCC
GCGTTATTTTTTCGCCGGCTTCGGCGCGCCGGCGCGGAGCGCAGCCGTAT
CTCCCAAGCGCCCAAGCCTCCGCTCGAAGCACGTCGAATGCTCCACGGTG
GTGGGTCCGTGGCCGTCGTCGTTCGCCGGGCAAGAGACCGCGGAGCTTAA
ATCCGCAGGCGACGGCGGCGGCTGTTCAAGCGGTGCTCGCCCGGAAGCCT
TGTCCATCGGGTCGCCAGCCCAAGCCTCCGCTCGAAGCACGTCGAATGCT
CCACGGTGGTGGGTCCGTGGCCGTCGTCGTTCGCCGGGCAAGAGACCGCG
GAGCTTAAATCCGCAGGCGACGGCGGCGGCTGTTCAAGCGGTGCTCGCCC
GGAAGCCTTGTCCATCGGGTCGCCAGGAAATGGTGGTGGCGGTGATGGTG
GCGGCAGGGGCAGCGGCAGAGGCGGCGGGGGTCGCGGCGGCGACGTCATC
GCCCGCTACGCCGACGCCTCGGTAATGCTCCTCCCTTCTCCACGTGCCAC
GACTGCCGCAGCTACCGCCGCCGACTGCACCGCCATGAGCACCCCGGCGA
TGGCGGCTGCCAGGGCGGCGGCTAGAGCGAGGGTCACGGTGACGGCGGCA
AACGCATCGTTGACAGCCTCTCAGGAAACTTCGCAGCTCGCCCCGCCGAA
GAGCATCGCCGCACGCGATATCCCTCCCGAAATGGTGGTGGCGGTGATGG
TGGCGGCAGGGGCAGCGGCAGAGGCGGCGGGGGTCGCGGCGGCGACGTCA
TCGCCCGCTACGCCGACGCCTCGGTAATGCTCCTCCCTTCTCCACGTGCC
ACGACTGCCGCAGCTACCGCCGCCGACTGCACCGCCATGAGCACCCCGGC
GATGGCGGCTGCCAGGGCGGCGGCTAGAGCGAGGGTCACGGTGACGGCGG
CAAACGCATCGTTGACAGCCTCTCAGGAAACTTCGCAGCTCGCCCCGCCG
AAGAGCATCGCCGCACGCGATATCCCTCCC
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