mRNA_P-fluviatile_contig57.12093.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig57.12093.1 vs. uniprot
Match: D8LBH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBH1_ECTSI) HSP 1 Score: 367 bits (942), Expect = 1.090e-117 Identity = 244/450 (54.22%), Postives = 301/450 (66.89%), Query Frame = 2
Query: 383 FPGRSEYQLGPNVSKGHARFSCPPLSNIG------NEWVIVS-------AERVKEQAEKVKALEEKVNNHKRDRVLIYDAAMKQAEQRKEEGVNEAKNMFERVLDTMRREVDQELSKISDRYQECCRDYATMVSDECEGEVSKQATELRKDWARQKQTIDQLMRSDGHEDRQASVLARAVMEQLHSEKKAEMAALRADIYSDIKMEFESREVALREVLESDFQKDLDGQLLLAEIRHQKEIDQLRMQLGSSRVPSAGAATGAIVVQCAVTTYCEEKGGQHS-----TSSPHLSKHPLQGAAAHARERG-----GVAIPIG----KPGRKFRLFKTPIQKVQNSRTEASMEAPRPANRSGRKLSPKPRIPVKKAAGIPK--AFGQDSDL-TTTPTRKQESEVD-GITSALSVSPTKALSGVVTPSIASDGRGSGDGESSRPKKRAKRLFST 1639
P S QLGP + PPL+ G ++W+IVS AE++++QAEK KALE V HKR+RVLIYDAAMKQA +R+ EGVNE K + ER MR EVDQE+ KISD YQE CRDYATMVSDEC+GE SK AT+LRKDWARQK+TIDQL+RS G EDRQ SV+ARAV+EQL E++ E+A+LRA IYSD+KMEFESREVALR+ LESDFQ DLDGQLLLAEIRHQKE+++LR++L S P+ A TG IVV T C +G + S T SP S+ PL G GV +P + GRKF +FKTP+QK + P +N+ + PK PV+ + P+ + G+ +++ TTTP R+QE E+D GITSAL VSPTKA+ GVVTPSI S+G SG+G SSRPKKRAK+LFST
Sbjct: 63 LPAGSGTQLGP---------ALPPLNVEGGKERHQSKWMIVSKEQVEQTAEKMRDQAEKNKALETTVKIHKRERVLIYDAAMKQAAKRELEGVNEVKQVLERQQGMMRAEVDQEMQKISDLYQERCRDYATMVSDECDGEDSKAATDLRKDWARQKKTIDQLVRSGGEEDRQVSVIARAVVEQLQEERRDEIASLRAAIYSDVKMEFESREVALRDTLESDFQADLDGQLLLAEIRHQKEMNRLRVELAGSEKPTTEAKTGEIVVYNPETPQCAGRGQRSSGTSSFTPSPSFSRRPLHKMNISEASGGNSGADGVHVPTTPRGTQLGRKFPVFKTPVQK----------QIPGASNKKA--VRPKEH-PVRDSTRQPRNSSVGRHTEISTTTPIREQEDELDVGITSALMVSPTKAIYGVVTPSIGSEGEVSGEG-SSRPKKRAKKLFST 489
BLAST of mRNA_P-fluviatile_contig57.12093.1 vs. uniprot
Match: A0A6H5KNT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNT9_9PHAE) HSP 1 Score: 342 bits (878), Expect = 4.280e-107 Identity = 264/581 (45.44%), Postives = 329/581 (56.63%), Query Frame = 2
Query: 47 PQAPKRVRFACDLAEHDDVHQALNP--DRMLVTAGIPTDEKGASST-KPNPDRGAEAVEPLHVERSTQIVPYVPRDAQLRGDPSMNLLPKPRALFASCVPRHVLVG--------DAGPLRDVEFPGRS--------EYQLGPNVSKGHARFSCPPLSNIGNE---------WVIVSAERV-------KEQAEKVKALEEKVNNHKRDRVLIYDAAMKQAEQRKEEGVNEAKNMFERVLDTMRREVDQELSKISDRYQECCRDYATMVSDECEGEVSKQATELRKDWARQKQTIDQLMRSDGHEDRQASVLARAVMEQLHSEKKAEMAALRADIYSDIKMEFESREVALREVLESDFQKDLDGQLLLAEIRHQKEIDQLRMQLGSSRVPSAGAATGAIVVQCAVTTYCEEKGGQHS-----TSSP-----HLSKHPLQGAAAHARERGGVAIPIG----KPGRKFRLFKTPIQKVQNSRTEASMEAPRPANRSGRKLSPKPRIPVKKAAGIPKAFGQDSDLTTTPTRKQESEVD-GITSALSVSPTKALSGVVTPSIASDGRGSGDGESSRPKKRAKRLFST 1639
P+ PKRVRFA D E + ++ + R GI + + T P P G E + + Q P ++ RG S+ ++P A P H L A LRD P S + G + G P LS + E W+IVS E+V ++QAEK KALE V +HKR+RVLIYDAAMKQA +R+ EGV+E K + ER MR EVDQE+ KISD YQE CRDYA MVSDEC+GE SK T+LRKDWARQK+TIDQL+RS EDRQ S +ARAV+EQL E+ E+A+LRA IYSD+KMEFESREVALR+ LESDFQ DLDGQLLLAEIRHQKE+++LR++L S P+ A T I+V T C G + S T+SP HL K + A+ GGV +P + GRKF +FKTP+QK + +A RP G +S R +AG T TP R+ E +D GITSAL VSPTKA+ GVVTPSI S+G SG+G SSRPKKRAK+LFS+
Sbjct: 5 PKTPKRVRFA-DQPESNPKGESADSISTRPSSQRGIDVPRETSIRTLTPFPSLGREDEGDIKSQSCGQD----PYESSARGMQSLAIVPYSGGGAAGQPPCHHLFALLEECSGSHAQVLRDAALPHGSFGGLPTNTRLEKGNGLPAGSGTQLGPVLSPLNVEGGKEHYQSKWMIVSKEQVEQTAKKMRDQAEKNKALETTVKSHKRERVLIYDAAMKQAAKRELEGVDEVKQVLERQQGMMRAEVDQEMRKISDLYQERCRDYARMVSDECDGEDSKAVTDLRKDWARQKKTIDQLVRSSREEDRQVSAIARAVVEQLQEERSDEIASLRAAIYSDVKMEFESREVALRDTLESDFQADLDGQLLLAEIRHQKEMNRLRVELAGSEKPTTEAKTSEIIVYNPETLQCAGSGQRSSGASSFTASPSFSRRHLHKMNIGEASGGNSGAGGVHVPTTPRGTQLGRKFPVFKTPVQKKIPG--IGNKKAVRP---KGHPVSDSTRKSRNSSAGRHTKIS-----TITPIREHEDYLDVGITSALMVSPTKAIHGVVTPSIGSEGGVSGEG-SSRPKKRAKKLFSS 569 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig57.12093.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig57.12093.1 >prot_P-fluviatile_contig57.12093.1 ID=prot_P-fluviatile_contig57.12093.1|Name=mRNA_P-fluviatile_contig57.12093.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=546bp MDEVVAPNELPPQAPKRVRFACDLAEHDDVHQALNPDRMLVTAGIPTDEKback to top mRNA from alignment at P-fluviatile_contig57:108809..113101+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig57.12093.1 ID=mRNA_P-fluviatile_contig57.12093.1|Name=mRNA_P-fluviatile_contig57.12093.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=4293bp|location=Sequence derived from alignment at P-fluviatile_contig57:108809..113101+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig57:108809..113101+ >mRNA_P-fluviatile_contig57.12093.1 ID=mRNA_P-fluviatile_contig57.12093.1|Name=mRNA_P-fluviatile_contig57.12093.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=3276bp|location=Sequence derived from alignment at P-fluviatile_contig57:108809..113101+ (Porterinema fluviatile SAG_2381)back to top |