mRNA_P-fluviatile_contig56.12042.1 (mRNA) Porterinema fluviatile SAG_2381
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Overview
Homology
BLAST of mRNA_P-fluviatile_contig56.12042.1 vs. uniprot
Match: D8LC80_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC80_ECTSI) HSP 1 Score: 348 bits (892), Expect = 2.690e-114 Identity = 157/244 (64.34%), Postives = 191/244 (78.28%), Query Frame = 2
Query: 5 DFNRNNSVRSTFGASPHLVRALGAPAVDFTLHDTDGSPWNLGEVLEAGQGKPVVLVFGMRSCPAYQGLGSGGESRTKWAYWDERRMVEDYGDRANFVHVYGPEPHPEAPDHNFDSGLLLPNYWSVRRQSVTYEDRLEQAKAIRNITHPDQVILPDYLTGNPYSSLNQPVWCSYSNGARSAVMVASRGRIFYQQGWLNTENLGKAIEGYWEQDGEGTWTDEEPIASPLSSASKAAKKKSKTSKGS 736
+F++ NSVR +G SPHLVR LG+PAVDFTLHD DG+ WNLGEVL AG+GKPVVL+FGM +CPAYQGL S W+YWDE +VE YGD+A FVH+YGPEPHP+ PD NFD+G PN+WSV RQ V Y+ R+E+AK IR+ITHPD+V+LPDYLTGNPYSSLNQPVWC+Y+NGAR +VMV+S G +FYQQ WL+TE LG AI+GYWEQDG GTW D E + L+ ++ +KK K S
Sbjct: 19 NFHKGNSVRDIYGTSPHLVRDLGSPAVDFTLHDLDGNRWNLGEVLAAGEGKPVVLIFGMWTCPAYQGLDVIEGSGNTWSYWDEHTLVEQYGDKAIFVHIYGPEPHPKPPDLNFDAGTFSPNFWSVHRQPVIYDVRVEKAKKIRSITHPDEVVLPDYLTGNPYSSLNQPVWCTYANGARPSVMVSSSGSVFYQQEWLSTEGLGNAIDGYWEQDGAGTWDDGEGVPPILNPRAQPGRKKPNARKAS 262
BLAST of mRNA_P-fluviatile_contig56.12042.1 vs. uniprot
Match: A0A6H5JSG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSG9_9PHAE) HSP 1 Score: 341 bits (875), Expect = 2.330e-111 Identity = 154/246 (62.60%), Postives = 189/246 (76.83%), Query Frame = 2
Query: 2 EDFNRNNSVRSTFGASPHLVRALGAPAVDFTLHDTDGSPWNLGEVLEAGQGKPVVLVFGMRSCPAYQGLGSGGESRTKWAYWDERRMVEDYGDRANFVHVYGPEPHPEAPDHNFDSGLLLPNYWSVRRQSVTYEDRLEQAKAIRNITHPDQVILPDYLTGNPYSSLNQPVWCSYSNGARSAVMVASRGRIFYQQGWLNTENLGKAIEGYWEQDGEGTWTDEEPIASPLSSASKAAKKKSKTSKGSR 739
E+F++ NS+R +G SPHLVR LG+PAVDFTLHD DG+ WNLGEVL AG GKPVV++FGM +CPA+QGL + S WAYW E +VE YGD+A FVH+YGPEPHP+ PD NFDSG PN WSV RQ V Y+ R+E+AK IR+ITHPD+V+LPDYLTGNPYSSLNQPVWC+Y+NGAR +VMV+S G IFYQQ W++TE L AI+GYWEQDG GTW D E + L+ ++ +K+ K R
Sbjct: 43 ENFHKGNSIRDIYGTSPHLVRDLGSPAVDFTLHDLDGNRWNLGEVLAAGAGKPVVMIFGMWTCPAFQGLDAAEGSGNTWAYWHEHNLVEQYGDKAIFVHIYGPEPHPQPPDLNFDSGSFAPNAWSVYRQPVMYDVRVEKAKKIRSITHPDEVVLPDYLTGNPYSSLNQPVWCTYANGARPSVMVSSSGSIFYQQEWMSTEGLENAIDGYWEQDGAGTWDDGEGASPVLNPRAQPGRKQPNARKAGR 288
BLAST of mRNA_P-fluviatile_contig56.12042.1 vs. uniprot
Match: A0A6H5L0M4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0M4_9PHAE) HSP 1 Score: 216 bits (551), Expect = 1.220e-62 Identity = 105/220 (47.73%), Postives = 139/220 (63.18%), Query Frame = 2
Query: 5 DFNRNNSVRSTFGASPHLVRALGAPAVDFTLHDTD-GSPWNLGEVLEA---GQGKPVVLVFGMRSCPAYQGLGSGGESRT--KWAYWDERRMVEDYGDRANFVHVYGPEPHPEAPDHNFDSGLLLPNYWSVRRQSVTYEDRLEQAKAIRNITHPDQVILPDYLTGNPYSSLNQPVWCSYSNGARSAVMVASRGRIFYQQGWLNTENLGKAIEGYWEQDGE 646
+F+R S+ +G SP L+ G+ A+DFT HD G PWNL E LE GKPVVL++GM +CPA+QG+G S K Y DE +VE Y DR FVH+YGPEPHP AP NFD G+++ +YWS Q +YE RL ++++ HP+Q I+PDY+ GNPYS L P+WCSY GAR A +A G IFYQQ WL+T +L ++ + E G+
Sbjct: 48 NFDRQRSMIGMYGQSPKLLLETGSGAIDFTSHDYPAGEPWNLREHLEGVGGDAGKPVVLIWGMFTCPAFQGMGDQPPSPPWDKCGYRDEYDLVETYKDRVTFVHLYGPEPHPTAPATNFDHGVVVNSYWSTVPQPKSYEQRLAMVDRVKDLVHPEQAIIPDYMPGNPYSDLINPLWCSYGIGARPATAIAQDGTIFYQQEWLHTGDLANELDVFLEGRGD 267
BLAST of mRNA_P-fluviatile_contig56.12042.1 vs. uniprot
Match: A0A6H5KKN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKN7_9PHAE) HSP 1 Score: 223 bits (567), Expect = 1.380e-62 Identity = 107/210 (50.95%), Postives = 141/210 (67.14%), Query Frame = 2
Query: 5 DFNRNNSVRSTFGAS-PHLVRALGAPAVDFTLHDTDGSPWNLGEVLEAGQGKPVVLVFGMRSCPAYQGLGSGGESRTKWAYWDERRMVEDYGDRANFVHVYGPEPHPEAPDHNFDSGLLLPNYWSVRRQSVTYEDRLEQAKAIRNITHPDQVILPDYLTGNPYSSLNQPVWCSYSNGARSAVMVASRGRIFYQQGWLNTENLGKAIEGYW 631
+F+R NS+++ G + P+L +G AVDFTLHD G WNLGE LE G PVV+V+GM +CPA+QG G+ K Y DE +VE YG +A FVH+YGPEPHP P NFD G +WSV +Q+ YE+R+ A+ I HP Q IL DYL GNPYS L QPVWCSYS GAR +V+ G++F+Q+GW ++E++G+AI+ YW
Sbjct: 176 NFDRENSIKAVNGGNTPYLPLTVGEDAVDFTLHDLKGRRWNLGETLER-TGLPVVMVWGMFTCPAFQGYGTY-PPWDKCGYRDEYDLVEAYGGKATFVHLYGPEPHPAMPGTNFDIGTTWQAFWSVFQQATRYEERVAMAQRIGRRIHPSQDILVDYLPGNPYSELIQPVWCSYSMGARPVTVVSPDGKLFFQRGWFHSEHVGRAIDEYW 383
BLAST of mRNA_P-fluviatile_contig56.12042.1 vs. uniprot
Match: D8LCJ3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ3_ECTSI) HSP 1 Score: 219 bits (559), Expect = 3.170e-62 Identity = 104/210 (49.52%), Postives = 139/210 (66.19%), Query Frame = 2
Query: 5 DFNRNNSVRSTFGAS-PHLVRALGAPAVDFTLHDTDGSPWNLGEVLEAGQGKPVVLVFGMRSCPAYQGLGSGGESRTKWAYWDERRMVEDYGDRANFVHVYGPEPHPEAPDHNFDSGLLLPNYWSVRRQSVTYEDRLEQAKAIRNITHPDQVILPDYLTGNPYSSLNQPVWCSYSNGARSAVMVASRGRIFYQQGWLNTENLGKAIEGYW 631
+F+R NS+++ G + P+L +G AVDFTLHD +G WNLGE LE G PVV+V+GM CP +QG G+ K Y DE +VE YG +A FVH+YGPEPHP P NFD G +WSV Q+ +Y++R A+ I + HP Q IL DYL GNPYS L QPVWCSYS GAR +V+ G++F+Q+ W ++E++G+AI+ YW
Sbjct: 146 NFDRENSIKAVNGGNTPYLPLTVGEDAVDFTLHDLEGRRWNLGETLER-TGLPVVMVWGMFICPGFQGYGTY-PPWDKCGYRDEYDLVEAYGGKATFVHLYGPEPHPAMPGTNFDIGTTWQAFWSVYPQATSYDERAAMAQRINRLIHPSQDILVDYLPGNPYSELIQPVWCSYSMGARPVTVVSPDGKLFFQRAWFHSEHVGRAIDEYW 353
BLAST of mRNA_P-fluviatile_contig56.12042.1 vs. uniprot
Match: A0A835Z1L4_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1L4_9STRA) HSP 1 Score: 196 bits (497), Expect = 1.010e-55 Identity = 92/215 (42.79%), Postives = 135/215 (62.79%), Query Frame = 2
Query: 2 EDFNRNNSVRSTFGASPHLVRALGAPAVDFTLHDTDGSPWNLGEVLEAGQGKPVVLVFGMRSCPAYQGLGSGGESRTKWAYWDERRMVEDYGDRAN---FVHVYGPEPHPEAPDHNFDSGLLLPNYWSVRRQSVTYEDRLEQAKAIRNITHPDQVILPDYLTGNPY-----SSLNQPVWCSYSNGARSAVMVASRGRIFYQQGWLNTENLGKAIE 622
++FN N ++ T+G SPH+V GA A+DFTL+D DG+ W L E L + +PV L++GM +CPA++GLG+ + AYWDE +V YG F H+ GPEPHP PD NFDSG++ N+WS Q+ TY+ R+ A+A+ + HP+ +LPD L PY ++ QPVWCSY++GAR+AV++ + G + Q W + ++ AIE
Sbjct: 21 DNFNGTNCIKCTYGTSPHIVLDAGAAAIDFTLYDLDGAAWTLSEHLAS---QPVCLIWGMHTCPAFEGLGTASPF-DECAYWDEAALVAAYGGSGGGVAFAHLVGPEPHPITPDTNFDSGVVKVNFWSTVAQARTYDARVAMARAVADKVHPNAALLPDLLPDAPYGDGDAAAAAQPVWCSYAHGARTAVLIGTDGVVRLAQTWFHAGDMAAAIE 231
BLAST of mRNA_P-fluviatile_contig56.12042.1 vs. uniprot
Match: A0A7S2RV85_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RV85_9STRA) HSP 1 Score: 158 bits (399), Expect = 3.310e-41 Identity = 81/199 (40.70%), Postives = 112/199 (56.28%), Query Frame = 2
Query: 41 GASPHLVRALGAPAVDFTLHDTDGSPWNLGEVLEAGQGKPVVLVFGMRSCPAYQGLGSGG--ESRTKWAYWDERRMVEDYGDRANFVHVYGPEPHPEAPDHNFDSGLLLPNYWSVRRQSVTYEDRLEQAKAIRNITHPDQVILPDYLTGNPYSSLN---QPVWCSYSNGARSAVMVASRGRIFYQQGWLNTENLGKAIE 622
G + + RA G AVDFTL+D G+ L +LE KPV L++GM +CPA+QGL S + ++W WD +VE Y D F+H+ GPEPHP APD NFD G + WS RQ Y++RL A + HPD +L D GN Y++ + PVWC+ +RSA++V G I + Q W ++L AI+
Sbjct: 58 GEAVWVSRAAGDSAVDFTLYDLAGNEVTLSTLLED---KPVALIWGMWTCPAFQGLRSDYPFDQNSRWEEWD---VVEKYKDVVTFLHLVGPEPHPLAPDQNFDKGYVWMESWSTVRQPTNYDERLVLANKVAEYVHPDATVLADLYPGNSYAAADVSSNPVWCTMGLHSRSALLVDQDGTITFSQSWFRKDDLSAAID 250
BLAST of mRNA_P-fluviatile_contig56.12042.1 vs. uniprot
Match: A0A7S3K7C6_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K7C6_9STRA) HSP 1 Score: 154 bits (390), Expect = 6.320e-40 Identity = 85/219 (38.81%), Postives = 122/219 (55.71%), Query Frame = 2
Query: 8 FNRNNSVRSTFGASPHLVRALG---APAVD-FTLHDTDGSPW-NLGEVLEAGQGKPVVLVFGMRSCPAYQGLGSGGESR-TKWAYWDERRMVEDYGDRA-NFVHVYGPEPHPEAPDHNFDSGLLLPNYWSVRRQSVTYEDRLEQAKAIRNITHPDQVILPDYLTGNPYSSL-------NQPVWCSYSNGARSAVMVASRGRIFYQQGWLNTENLGKAIE 622
F+ N V+ T+GASPH+ ++G +P + TL GS W +LG GK VL++GM +CPA+QGLG+GG + +Y DE +VE Y ++ F+H+ GPEPHP PD NFDSG L NYWS Q T++DRL+ A+ + HP + L D L P NQP WC+ GAR+A+++ G + + Q W +L A++
Sbjct: 33 FSTTNCVKCTYGASPHIPVSVGDNISPQLQALTLSTASGSSWKSLGTETS---GKISVLIWGMWTCPAFQGLGTGGSPPFDECSYRDEYDLVETYANKGVRFIHLIGPEPHPITPDVNFDSGKQLMNYWSTIAQPKTWDDRLQVAQRTAALIHPRSLTLVDPLADAPTQHKEGTEGFKNQPTWCTLGLGARTAILIDQHGTVQFTQDWFRKSDLANALD 248
BLAST of mRNA_P-fluviatile_contig56.12042.1 vs. uniprot
Match: A0A7S2C362_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2C362_9STRA) HSP 1 Score: 138 bits (347), Expect = 4.520e-32 Identity = 71/213 (33.33%), Postives = 114/213 (53.52%), Query Frame = 2
Query: 5 DFNRNNSVRSTFGASPHLVRALGAPAVDFTLHDTDGSPWNLGEVLEAGQGKPVVLVFGMRSCPAYQGLGSGGESRTKWAYWDERRMVEDYGDRANFVHVYGPEPHPEAPDHNFDSGLLLPNYWSVRRQSVTYEDRLEQAKAIRNITHPDQVILPDYLTGNPYSSLNQ-------PVWCSYSNGARSAVMVASRGRIFYQQGWLNTENLGKAIE 622
DF+ +NS+ + + P + A G A+DF L D + + L +++ KPVV+V+GM +CPA+QGL + ++ +D+ +V+ Y +FV++Y EPHP APD NFD+G + WS RQ TY DR A+ + H ++L D L L + PVWC+Y G+R A ++ G+++ QGW + + A+E
Sbjct: 69 DFDYDNSINAYYPNDPTPLVARGGFAIDFALPSLDDNVYYLRDLIRT---KPVVMVYGMLTCPAFQGLYLEDHKESHFSKYDQWALVDKYHKDFHFVNLYSVEPHPMAPDKNFDTGGHVEYAWSTFRQPRTYRDRGYFAQNLAEELHEKSILLVDNLGNEKLPELKENNIPEYNPVWCTYGPGSRMAFLIGQDGKLYNVQGWFHATTMAGAME 278
BLAST of mRNA_P-fluviatile_contig56.12042.1 vs. uniprot
Match: A0A7S2G552_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G552_9STRA) HSP 1 Score: 119 bits (298), Expect = 9.710e-27 Identity = 70/196 (35.71%), Postives = 96/196 (48.98%), Query Frame = 2
Query: 8 FNRNNSVRSTFGASPHLVRALGAPAVDFTLHDTDGSPWNLGEVLEAGQGKPVVLVFGMRSCPAYQGLGSGGESRTKWAYWDERRMVEDYGDRANFVHVYGPEPHPEAPDHNFDSGLLLPNYWSVRRQSVTYEDRLEQAKAIRNITHPDQVILPDYLTGNPYSSLNQPVWCSYSNGARSAVMVASRGRIFYQQGWLN 595
F+ NSV S +G P+L R G PAVDFT+ DG NL +L KPVV++FGM +CP T ER + E YGD +F+H+Y +PHPE+P N D G + +S + Y RLE AKA + ++ D +P N P+WC+Y RSA ++ G I Q W +
Sbjct: 53 FSPENSVLSLYGQQPYLTRRTGDPAVDFTMKTIDGEVVNLKALLST---KPVVMIFGMYTCPV-----------THATLGHERNLTELYGDDVHFLHIYSMDPHPESPQKNPDIGRVWEFDYSTIERPNNYTGRLELAKATAGTWGLNSKVIVD--EASPLR--NNPLWCTYGPSPRSAHLIRQDGIIQLAQTWFD 230 The following BLAST results are available for this feature:
BLAST of mRNA_P-fluviatile_contig56.12042.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-fluviatile_contig56.12042.1 >prot_P-fluviatile_contig56.12042.1 ID=prot_P-fluviatile_contig56.12042.1|Name=mRNA_P-fluviatile_contig56.12042.1|organism=Porterinema fluviatile SAG_2381|type=polypeptide|length=191bp MRSCPAYQGLGSGGESRTKWAYWDERRMVEDYGDRANFVHVYGPEPHPEAback to top mRNA from alignment at P-fluviatile_contig56:815606..818677+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-fluviatile_contig56.12042.1 ID=mRNA_P-fluviatile_contig56.12042.1|Name=mRNA_P-fluviatile_contig56.12042.1|organism=Porterinema fluviatile SAG_2381|type=mRNA|length=3072bp|location=Sequence derived from alignment at P-fluviatile_contig56:815606..818677+ (Porterinema fluviatile SAG_2381)back to top Coding sequence (CDS) from alignment at P-fluviatile_contig56:815606..818677+ >mRNA_P-fluviatile_contig56.12042.1 ID=mRNA_P-fluviatile_contig56.12042.1|Name=mRNA_P-fluviatile_contig56.12042.1|organism=Porterinema fluviatile SAG_2381|type=CDS|length=1146bp|location=Sequence derived from alignment at P-fluviatile_contig56:815606..818677+ (Porterinema fluviatile SAG_2381)back to top |